Pregenerated sensors for SMIM10L2B (Homo sapiens)
Ensembl gene IDs: ENSG00000196972Ensembl transcript IDs: ENST00000433425.4
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGACTCGATCACTGGGCACCCCCACCCCTGTGAGCCTTTGTCCATaGTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: RTRSLGTPTPVSLCP*CASTRKALLLLLFR Trigger: CCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGACAAAGGCTCACAGGGGTGGGGGTGCCCAGTGATCGAGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| 3UTR-3UTR GCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTTGTTCAGTGCATTTCTaGGCGATCCGGGGTCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: VIRRGKYTSLTVLLADFSCSVHF*AIRGPG Trigger: CCCGGGACCCCGGATCGCGCAGAAATGCACTGAACA...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| 3UTR-3UTR GCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTGTCCAGGGTCAGAGGTaGCCCAGGGTAGGGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: VIRRGKYTSLTVLLADFSVQGQR*PRVGMR Trigger: TCTCATCCCTACCCTGGGGCACCTCTGACCCTGGAC...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| 3UTR-3UTR GCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTGCCTACAAACGTCAATaGCTTTCTGCTCGGGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: VIRRGKYTSLTVLLADFSAYKRQ*LSARGG Trigger: CCCGCCCCGAGCAGAAAGGCATTGACGTTTGTAGGC...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| 3UTR-3UTR GCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTACGTCAATGCCTTTCTaGTCGGGGCGGGGAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VIRRGKYTSLTVLLADFSTSMPF*SGRGKS Trigger: TGACTTTCCCCGCCCCGAGCAGAAAGGCATTGACGT...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| 3UTR GCA 72 bp | TCACTGGGCACCCCCACCCCTGTGAGCCTTTGTCCATaGTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: SLGTPTPVSLCP*CASTRKALLLL Trigger: GAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGACAAAGGCTCACAGGGGTGGGGGTGCCCAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR TCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTGCAGAAGGCGCCGTATaGGCCTCGGGCCGCCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: VIRRGKYTSLTVLLADFSAEGAV*ASGRRR Trigger: TCGGCGGCGGCCCGAGGCTCATACGGCGCCTTCTGC...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR GCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTCAAGCCAGACAGGGCTaGCGCCGCCGCCGCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VIRRGKYTSLTVLLADFSQARQG*RRRRRR Trigger: TCTGCGGCGGCGGCGGCGGCAGCCCTGTCTGGCTTG...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR GCA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTATGGGGTGGGTTCCCTaGAGTCGGGGGTCTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPMGWVP*SRGSLR Trigger: CCTCAGAGACCCCCGACTGCAGGGAACCCACCCCAT...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR GCA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTGCCTACAAACGTCAATaGCTTTCTGCTCGGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPAYKRQ*LSARGG Trigger: CCCGCCCCGAGCAGAAAGGCATTGACGTTTGTAGGC...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR GCA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTGAGGGTAGGGACCCCTaGAGCTCCGACACACATTTC | + |
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Preference number: 4 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPEGRDP*SSDTHF Trigger: GAAATGTGTGTCGGAGCTGCAGGGGTCCCTACCCTC...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR TCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTGGTCCAGTGGCCTGCTaGGGAGGGTACGTGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: VIRRGKYTSLTVLLADFSGPVAC*GGYVVG Trigger: ACCTACCACGTACCCTCCTCAGCAGGCCACTGGACC...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR GCA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTACGTCAATGCCTTTCTaGTCGGGGCGGGGAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPTSMPF*SGRGKS Trigger: TGACTTTCCCCGCCCCGAGCAGAAAGGCATTGACGT...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR GCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTTCAGGCCCTTCACGCTaGCTCTGCCCAAGCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VIRRGKYTSLTVLLADFSSGPSR*LCPSRS Trigger: GGACCTGCTTGGGCAGAGGCAGCGTGAAGGGCCTGA...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR CCA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTGGTTCTCAGGAGACTTaGGACAAGGAGGCACCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPGSQET*DKEAPH Trigger: ATGGGGTGCCTCCTTGTCCCAAGTCTCCTGAGAACC...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR TCA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTTTCAATCCCAGGAACTaGGAATGTGGCCCTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPFNPRN*ECGPQG Trigger: ACCCTGAGGGCCACATTCTCAGTTCCTGGGATTGAA...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR CCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTGGTCTTGGAGAAGACTaGGGAGGGGTGTGGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VIRRGKYTSLTVLLADFSGLGED*GGVWEP Trigger: AGGCTCCCACACCCCTCCCCAGTCTTCTCCAAGACC...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR CCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTAGAGGTGGTCAAGGGTaGACAGGGTTGGGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: VIRRGKYTSLTVLLADFSRGGQG*TGLGRM Trigger: CATCCGCCCCAACCCTGTCCACCCTTGACCACCTCT...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR TCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTGACAGGAGCAAATGCTaGGGGCTTAGCCCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VIRRGKYTSLTVLLADFSDRSKC*GLSPAP Trigger: AGGAGCAGGGCTAAGCCCTCAGCATTTGCTCCTGTC...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR GCA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTCCTCCTCATCCTATCTaGATGTCAAGGGCAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPPPHPI*MSRANP Trigger: GGGATTTGCCCTTGACATGCAGATAGGATGAGGAGG...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR GCA 90 bp | GTCATTAGGAGGGGGAAATACACCTCTCTCACAGTGCTGCTAGCCGATTTCAGTTGTGATCTTCTGTACTaGTCCAAAGAAAGCGAGATC | + |
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Preference number: 4 (lower is better) Translates to: VIRRGKYTSLTVLLADFSCDLLY*SKESEI Trigger: GATCTCGCTTTCTTTGGAGCAGTACAGAAGATCACA...ACTGAAATCGGCTAGCAGCACTGTGAGAGAGGTGTATTTCCCCCTCCTAATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR CAA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTCAAGGGTGGACAGGGTaGGGGCGGATGAGAGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPQGWTG*GRMREA Trigger: GGCCTCTCTCATCCGCCCCAACCCTGTCCACCCTTG...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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| CDS-3UTR CAA 90 bp | GTCCATGCTGTGCCTCTACTAGGAAGGCCCTTCTTCTCCTCTTGTTCAGGCCCTGGGTTCTCAGGAGACTaGGGACAAGGAGGCACCCCA | + |
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Preference number: 5 (lower is better) Translates to: VHAVPLLGRPFFSSCSGPGFSGD*GQGGTP Trigger: TGGGGTGCCTCCTTGTCCCAAGTCTCCTGAGAACCC...AGGGCCTGAACAAGAGGAGAAGAAGGGCCTTCCTAGTAGAGGCACAGCATGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433425.4 |
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