Pregenerated sensors for SMIM10 (Homo sapiens)
Ensembl gene IDs: ENSG00000184785Ensembl transcript IDs: ENST00000330288.6
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAATGGAAAGAATGAGTGGCAAGTCTGCATGCAGGAGCGGAGTTaGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: GNGKNEWQVCMQERS*SLCSRVGEQVGGSQ Trigger: CTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCGCTCCTGCATGCAGACTTGCCACTCATTCTTTCCATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR GCA 90 bp | ATACTAAAAGATGAGGCAATGGAAAGAATGAGTGGCAAGTCTGCATaGAGGAGCGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: ILKDEAMERMSGKSA*RSGVGRFALGWVSR Trigger: CCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCGCTCCTGCATGCAGACTTGCCACTCATTCTTTCCATTGCCTCATCTTTTAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR-3UTR TCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTGGAAGTCAGCCATCCTaGCGAGGAGCCCCCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFGSQPS*RGAPKC Trigger: GCATTTGGGGGCTCCTCGTCAGGATGGCTGACTTCC...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR-3UTR GCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTAATGAGTGGCAAGTCTaGATGCAGGAGCGGAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFNEWQV*MQERSW Trigger: CCAACTCCGCTCCTGCATGCAGACTTGCCACTCATT...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR-3UTR TCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTAGGCAATGGAAAGAATaGGTGGCAAGTCTGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFRQWKE*VASLHA Trigger: TGCATGCAGACTTGCCACTCATTCTTTCCATTGCCT...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR-3UTR GCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTCTAATTGGGGAGATTTaGCTGCTGTCTGAGCCATTC | + |
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Preference number: 2 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFLIGEI*LLSEPF Trigger: GAATGGCTCAGACAGCAGGCAAATCTCCCCAATTAG...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR CCA 72 bp | GCATGCAGGAGCGGAGTTGGTCGCTTTGCTCTAGGGTaGGTGAGCAGGTGGGTGGAAGTCAGCCATCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: ACRSGVGRFALG*VSRWVEVSHPD Trigger: GTCAGGATGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCGCTCCTGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR GCA 72 bp | TGGCAAGTCTGCATGCAGGAGCGGAGTTGGTCGCTTTaGTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: WQVCMQERSWSL*SRVGEQVGGSQ Trigger: CTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCGCTCCTGCATGCAGACTTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR CCA 72 bp | AAGAATGAGTGGCAAGTCTGCATGCAGGAGCGGAGTTaGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: KNEWQVCMQERS*SLCSRVGEQVG Trigger: ACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCGCTCCTGCATGCAGACTTGCCACTCATTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR GCA 72 bp | TGTTGGCTACCTGGTTCAATGAATAGCAAAGTGGAATaGTCTGATTGGATTTTCTCATCACCGACTCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CWLPGSMNSKVE*SDWIFSSPTPE Trigger: CTCTGGAGTCGGTGATGAGAAAATCCAATCAGAGCATTCCACTTTGCTATTCATTGAACCAGGTAGCCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR-3UTR CAA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTTGCATTCTGTGCCCATaGTCATTTCCTAAAGTTCGT | + |
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Preference number: 3 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFCILCP*SFPKVR Trigger: ACGAACTTTAGGAAATGACAATGGGCACAGAATGCA...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR GCA 72 bp | TTGGGTCTATTCACTTCGTTTCTAATTGGGGAGATTTaGCTGCTGTCTGAGCCATTCTTGTTCAGTTTATCT | + |
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Preference number: 3 (lower is better) Translates to: LGLFTSFLIGEI*LLSEPFLFSLS Trigger: AGATAAACTGAACAAGAATGGCTCAGACAGCAGGCAAATCTCCCCAATTAGAAACGAAGTGAATAGACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| 3UTR TCA 72 bp | CTAATTTTTAACTCTTCTGTTGGCTACCTGGTTCAATaGATAGCAAAGTGGAATGCTCTGATTGGATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: LIFNSSVGYLVQ*IAKWNALIGFS Trigger: AGAAAATCCAATCAGAGCATTCCACTTTGCTATTCATTGAACCAGGTAGCCAACAGAAGAGTTAAAAATTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR TCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCATCCATCAGGCTCCGCTaGCTCACCGACCGTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPSIRLR*LTDRGT Trigger: TGTCCCACGGTCGGTGAGTCAGCGGAGCCTGATGGA...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR TCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCAGGAAGTCAGCCATCCTaGCGAGGAGCCCCCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPGSQPS*RGAPKC Trigger: GCATTTGGGGGCTCCTCGTCAGGATGGCTGACTTCC...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR CCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCAGGGTGGGTGAGCAGGTaGGTGGAAGTCAGCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPGWVSR*VEVSHP Trigger: AGGATGGCTGACTTCCACCCACCTGCTCACCCACCC...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR GCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCAAGTGGCAAGTCTGCATaGAGGAGCGGAGTTGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPSGKSA*RSGVGR Trigger: GCGACCAACTCCGCTCCTGCATGCAGACTTGCCACT...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR GCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCAAATGAGTGGCAAGTCTaGATGCAGGAGCGGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPNEWQV*MQERSW Trigger: CCAACTCCGCTCCTGCATGCAGACTTGCCACTCATT...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR TCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCAAGGCAATGGAAAGAATaGGTGGCAAGTCTGCATGCA | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPRQWKE*VASLHA Trigger: TGCATGCAGACTTGCCACTCATTCTTTCCATTGCCT...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR GCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCATTGGGGAGATTTGCCTaGTGTCTGAGCCATTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPLGRFA*CLSHSC Trigger: ACAAGAATGGCTCAGACAGCAGGCAAATCTCCCCAA...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR TCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCAGGCTACCTGGTTCAATaGATAGCAAAGTGGAATGCT | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPGYLVQ*IAKWNA Trigger: AGCATTCCACTTTGCTATTCATTGAACCAGGTAGCC...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR GCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCACTCCTTCTCAACTCTTaGTTCCCCAAATCAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPLLLNS*FPKSET Trigger: TGTTTCTGATTTGGGGAAGCAAGAGTTGAGAAGGAG...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR TCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTCTCCTGGGCTGCTGCTaGTCCGAGCTGCGCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFLLGCC*SELRCK Trigger: CTTGCAGCGCAGCTCGGATCAGCAGCAGCCCAGGAG...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR TCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTCCGCCGCCATGGACCTaGTGCTGCCTCCCACATAGT | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFPPPWT*CCLPHS Trigger: ACTATGTGGGAGGCAGCATCAGGTCCATGGCGGCGG...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR CCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTCGTGGGACAGAGGGATaGACGCGGGAAAGTACGGGC | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFRGTEG*TRESTG Trigger: GCCCGTACTTTCCCGCGTCCATCCCTCTGTCCCACG...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR CCA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCATTCATCTCATTCAATTaGGTCTATTCACTTCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPFISFN*VYSLRF Trigger: GAAACGAAGTGAATAGACCCAATTGAATGAGATGAA...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR CCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTCGCTTTGCTCTAGGGTaGGTGAGCAGGTGGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFRFALG*VSRWVE Trigger: TTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCG...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR GCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTCGAGGAGCCCCCAAATaGCACAAAGTTAGTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFRGAPK*HKVSGS Trigger: AGAGCCACTAACTTTGTGGCATTTGGGGGCTCCTCG...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR TCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTCCGACTCCAGAGTCTTaGTCCATGTGCCAATATTCA | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFPTPES*SMCQYS Trigger: TGAATATTGGCACATGGATCAAGACTCTGGAGTCGG...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR TCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTGATTTGCCTGCTGTCTaGGCCATTCTTGTTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFDLPAV*AILVQF Trigger: AAACTGAACAAGAATGGCTCAGACAGCAGGCAAATC...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR CCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTATATATACCTGCAGGTaGACGTTGAGAATCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFIYTCR*TLRITE Trigger: CTCGGTGATTCTCAACGTCCACCTGCAGGTATATAT...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR GCA 90 bp | ATCACCGACTCCAGAGTCTTGATCCATGTGCCAATATTCAAACAGATTCCCTTTAATAGCAAAGTGGAATaGTCTGATTGGATTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: ITDSRVLIHVPIFKQIPFNSKVE*SDWIFS Trigger: TGAGAAAATCCAATCAGAGCATTCCACTTTGCTATT...AAAGGGAATCTGTTTGAATATTGGCACATGGATCAAGACTCTGGAGTCGGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR CAA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCAACCGACTCCAGAGTCTaGATCCATGTGCCAATATTC | + |
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Preference number: 5 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPTDSRV*IHVPIF Trigger: GAATATTGGCACATGGATCAAGACTCTGGAGTCGGT...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR CAA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCAAACTTCTACACGTGCTaGTTTAGAGATTACACCCCC | + |
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Preference number: 5 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPNFYTC*FRDYTP Trigger: GGGGGTGTAATCTCTAAACAAGCACGTGTAGAAGTT...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS TCA 90 bp | CTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCATCCTaGCGAGGAGCCCCCAAATGCCACAAAGTTAGTGGCTCTAAATAT | + |
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Preference number: 5 (lower is better) Translates to: LCSRVGEQVGGSQPS*RGAPKCHKVSGSKY Trigger: ATATTTAGAGCCACTAACTTTGTGGCATTTGGGGGCTCCTCGTCAGGATGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS-3UTR CAA 90 bp | CGGAGTTGGTCGCTTTGCTCTAGGGTGGGTGAGCAGGTGGGTGGAAGTCAGCCATTTTTAACTCTTCTGTaGGCTACCTGGTTCAATGAA | + |
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Preference number: 5 (lower is better) Translates to: RSWSLCSRVGEQVGGSQPFLTLL*ATWFNE Trigger: TTCATTGAACCAGGTAGCCAACAGAAGAGTTAAAAA...TGGCTGACTTCCACCCACCTGCTCACCCACCCTAGAGCAAAGCGACCAACTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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| CDS TCA 72 bp | CCGCCAGGCCAGACAGGGCCGCCGCCGCCATGGACCTaGTGCTGCCTCCCACATAGTGCCCAGAGCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PPGQTGPPPPWT*CCLPHSAQSPR Trigger: CCTTGGGCTCTGGGCACTATGTGGGAGGCAGCATCAGGTCCATGGCGGCGGCGGCCCTGTCTGGCCTGGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330288.6 |
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