Pregenerated sensors for SMILR (Homo sapiens)
Ensembl gene IDs: ENSG00000255364Ensembl transcript IDs: ENST00000533992.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CATCTCACAGCCATGCTCTGGCCATTACAATTCATATCCATCATATaGAAATCACACTTGCTTTACTCCCAAGACCTCCAAGGTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: HLTAMLWPLQFISII*KSHLLYSQDLQGFI Trigger: GATGAAACCTTGGAGGTCTTGGGAGTAAAGCAAGTGTGATTTGCATATGATGGATATGAATTGTAATGGCCAGAGCATGGCTGTGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS GCA 90 bp | ATTTTCTTTTCGAAGAGACCATTACCACATCTTCCAAGAAGGAGTTaGCCAACATCTCAGAAACGAACACAGATTAAGTTGCAGACACCT | + |
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Preference number: 5 (lower is better) Translates to: IFFSKRPLPHLPRRS*PTSQKRTQIKLQTP Trigger: AGGTGTCTGCAACTTAATCTGTGTTCGTTTCTGAGATGTTGGGCAACTCCTTCTTGGAAGATGTGGTAATGGTCTCTTCGAAAAGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS GCA 90 bp | ATTCAGTCTTGGTTCCCTAAAATGGGAGTTTTCATCTCACAGCCATaGTCTGGCCATTACAATTCATATCCATCATATGCAAATCACACT | + |
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Preference number: 5 (lower is better) Translates to: IQSWFPKMGVFISQP*SGHYNSYPSYANHT Trigger: AGTGTGATTTGCATATGATGGATATGAATTGTAATGGCCAGAGCATGGCTGTGAGATGAAAACTCCCATTTTAGGGAACCAAGACTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS GCA 90 bp | CAAGAAGGAGTTGCCCAACATCTCAGAAACGAACACAGATTAAGTTaGAGACACCTTCCAAACATCCATGTAAATTATGGAATTCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: QEGVAQHLRNEHRLS*RHLPNIHVNYGIQS Trigger: AGACTGAATTCCATAATTTACATGGATGTTTGGAAGGTGTCTGCAACTTAATCTGTGTTCGTTTCTGAGATGTTGGGCAACTCCTTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS GCA 72 bp | GCCATGCTCTGGCCATTACAATTCATATCCATCATATaGAAATCACACTTGCTTTACTCCCAAGACCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: AMLWPLQFISII*KSHLLYSQDLQ Trigger: TTGGAGGTCTTGGGAGTAAAGCAAGTGTGATTTGCATATGATGGATATGAATTGTAATGGCCAGAGCATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS GCA 72 bp | TCGAAGAGACCATTACCACATCTTCCAAGAAGGAGTTaGCCAACATCTCAGAAACGAACACAGATTAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SKRPLPHLPRRS*PTSQKRTQIKL Trigger: CAACTTAATCTGTGTTCGTTTCTGAGATGTTGGGCAACTCCTTCTTGGAAGATGTGGTAATGGTCTCTTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS TCA 72 bp | GAGACTCGTGAGTGTAGCTTCTTGGTTTCAGCAACTTaGATACAGTTTCTCTCAAACTCTGTGAACAGAATG | + |
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Preference number: 6 (lower is better) Translates to: ETRECSFLVSAT*IQFLSNSVNRM Trigger: CATTCTGTTCACAGAGTTTGAGAGAAACTGTATTCAAGTTGCTGAAACCAAGAAGCTACACTCACGAGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS GCA 72 bp | TGGTTCCCTAAAATGGGAGTTTTCATCTCACAGCCATaGTCTGGCCATTACAATTCATATCCATCATATGCA | + |
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Preference number: 6 (lower is better) Translates to: WFPKMGVFISQP*SGHYNSYPSYA Trigger: TGCATATGATGGATATGAATTGTAATGGCCAGAGCATGGCTGTGAGATGAAAACTCCCATTTTAGGGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS CAA 90 bp | CCAAGAAGGAGTTGCCCAACATCTCAGAAACGAACACAGATTAAGTaGCAGACACCTTCCAAACATCCATGTAAATTATGGAATTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: PRRSCPTSQKRTQIK*QTPSKHPCKLWNSV Trigger: GACTGAATTCCATAATTTACATGGATGTTTGGAAGGTGTCTGCAACTTAATCTGTGTTCGTTTCTGAGATGTTGGGCAACTCCTTCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS GCA 72 bp | GTTGCCCAACATCTCAGAAACGAACACAGATTAAGTTaGAGACACCTTCCAAACATCCATGTAAATTATGGA | + |
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Preference number: 6 (lower is better) Translates to: VAQHLRNEHRLS*RHLPNIHVNYG Trigger: TCCATAATTTACATGGATGTTTGGAAGGTGTCTGCAACTTAATCTGTGTTCGTTTCTGAGATGTTGGGCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS CAA 72 bp | AGTTGCCCAACATCTCAGAAACGAACACAGATTAAGTaGCAGACACCTTCCAAACATCCATGTAAATTATGG | + |
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Preference number: 6 (lower is better) Translates to: SCPTSQKRTQIK*QTPSKHPCKLW Trigger: CCATAATTTACATGGATGTTTGGAAGGTGTCTGCAACTTAATCTGTGTTCGTTTCTGAGATGTTGGGCAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS CCA 72 bp | CTTCCAAACATCCATGTAAATTATGGAATTCAGTCTTaGTTCCCTAAAATGGGAGTTTTCATCTCACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LPNIHVNYGIQS*FPKMGVFISQP Trigger: TGGCTGTGAGATGAAAACTCCCATTTTAGGGAACCAAGACTGAATTCCATAATTTACATGGATGTTTGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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| CDS GCA 72 bp | CATTACAATTCATATCCATCATATGCAAATCACACTTaGTTTACTCCCAAGACCTCCAAGGTTTCATCAACT | + |
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Preference number: 6 (lower is better) Translates to: HYNSYPSYANHT*FTPKTSKVSST Trigger: AGTTGATGAAACCTTGGAGGTCTTGGGAGTAAAGCAAGTGTGATTTGCATATGATGGATATGAATTGTAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533992.1 |
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