RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMG9 (Homo sapiens)

Ensembl gene IDs: ENSG00000105771

Ensembl transcript IDs: ENST00000270066.11, ENST00000594081.1, ENST00000595700.5, ENST00000596714.1, ENST00000597586.5, ENST00000597598.1, ENST00000598860.1, ENST00000598886.1, ENST00000600097.1, ENST00000601170.5, ENST00000602222.5

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCTCTGGGCCGGGAAGCCACGATCCCTCATCCATCAGGCCTGCTaGCGCTCTCCACCCCAGCGGGGGATGGACATCTGTGCTCCCTCG +
Preference number: 1 (lower is better)
Translates to: CLWAGKPRSLIHQAC*RSPPQRGMDICAPS
Trigger: CGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGGAGAGCGGCAGCAGGCCTGATGGATGAGGGATCGTGGCTTCCCGGCCCAGAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp CCCTCATCCATCAGGCCTGCTGCCGCTCTCCACCCCAGCGGGGGATaGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTC +
Preference number: 1 (lower is better)
Translates to: PSSIRPAAALHPSGG*TSVLPRSTLRTQEV
Trigger: GACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGGAGAGCGGCAGCAGGCCTGATGGATGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp TCATGTCTCTGGGCCGGGAAGCCACGATCCCTCATCCATCAGGCCTaGTGCCGCTCTCCACCCCAGCGGGGGATGGACATCTGTGCTCCC +
Preference number: 1 (lower is better)
Translates to: SCLWAGKPRSLIHQA*CRSPPQRGMDICAP
Trigger: GGGAGCACAGATGTCCATCCCCCGCTGGGGTGGAGAGCGGCAGCAGGCCTGATGGATGAGGGATCGTGGCTTCCCGGCCCAGAGACATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp AGAGGGGAGGCTCCTTGCCTACTACAGTCGGTCAGGAAGTGGCTGTaGCAGAGCCTGTGCTGGGCCTCCTGTCTCCCAGGCCTCAGCCCT +
Preference number: 1 (lower is better)
Translates to: RGEAPCLLQSVRKWL*QSLCWASCLPGLSP
Trigger: AGGGCTGAGGCCTGGGAGACAGGAGGCCCAGCACAGGCTCTGGCACAGCCACTTCCTGACCGACTGTAGTAGGCAAGGAGCCTCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp GGGCTTCCTGGTGACCATTCAGACTCCTCCCACTGCTTGTCCCTGTaGAGGACACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGA +
Preference number: 1 (lower is better)
Translates to: GLPGDHSDSSHCLSL*RTQDGLPHLRFGVG
Trigger: TCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGTGTCCTCCACAGGGACAAGCAGTGGGAGGAGTCTGAATGGTCACCAGGAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp GCATCCTGGTCACCTGCAGCACCTCCTTCACCACCATCTACCGGATaGTTCACACGCCCCTGGATTTGGCAGCCAGGGACACCAAGAGTG +
Preference number: 1 (lower is better)
Translates to: ASWSPAAPPSPPSTG*FTRPWIWQPGTPRV
Trigger: CACTCTTGGTGTCCCTGGCTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGCTGCAGGTGACCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp GCATGCTGTCTGGTGCCGTCTTGCCTTGGGTCTCCCATCTTTCTCTaGCCGTTGCCCCCACCACCTTTCCTACTCTGGCAAACCCCCAAA +
Preference number: 1 (lower is better)
Translates to: ACCLVPSCLGSPIFL*PLPPPPFLLWQTPK
Trigger: TTTGGGGGTTTGCCAGAGTAGGAAAGGTGGTGGGGGCAACGGCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp TCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAAAACCCTaGAGGTGGGACAGGGCCTTTGGACCAAGGTCACCAGATCACCAC +
Preference number: 1 (lower is better)
Translates to: SSVKLPQRASPCTKP*RWDRAFGPRSPDHH
Trigger: GTGGTGATCTGGTGACCTTGGTCCAAAGGCCCTGTCCCACCTCCAGGGTTTTGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 90 bp CCTGTCCCTGAAAAAGGAGGTCAAGATGGAGCCCGGGCTTCCTGGTaGCCATTCAGACTCCTCCCACTGCTTGTCCCTGTGGAGGACACA +
Preference number: 1 (lower is better)
Translates to: PVPEKGGQDGARASW*PFRLLPLLVPVEDT
Trigger: TGTGTCCTCCACAGGGACAAGCAGTGGGAGGAGTCTGAATGGTCACCAGGAAGCCCGGGCTCCATCTTGACCTCCTTTTTCAGGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp ATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTaGAGCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCC +
Preference number: 1 (lower is better)
Translates to: ISRVPHFTHPGILVT*STSFTTIYRMLHTP
Trigger: GGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp TGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTaGACAAAACCCTGGAGGTGGGACAGGGCCTTTGGACCAAGGTCA +
Preference number: 1 (lower is better)
Translates to: CQFDSSVKLPQRASP*TKPWRWDRAFGPRS
Trigger: TGACCTTGGTCCAAAGGCCCTGTCCCACCTCCAGGGTTTTGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp AACTCTCCTGGACTGAGTTGCATGCTGTCTGGTGCCGTCTTGCCTTaGGTCTCCCATCTTTCTCTGGCCGTTGCCCCCACCACCTTTCCT +
Preference number: 1 (lower is better)
Translates to: NSPGLSCMLSGAVLP*VSHLSLAVAPTTFP
Trigger: AGGAAAGGTGGTGGGGGCAACGGCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 90 bp CTCTGTCCCCAGCCTTGTGCTGAAAGGGGCTGGGATGGAAGAAACTaGAGCTCCAACTCTCCTGGACTGAGTTGCATGCTGTCTGGTGCC +
Preference number: 1 (lower is better)
Translates to: LCPQPCAERGWDGRN*SSNSPGLSCMLSGA
Trigger: GGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCTTCAGTTTCTTCCATCCCAGCCCCTTTCAGCACAAGGCTGGGGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 90 bp GGCAGCTGCCAGCACAACATGGCCTGCTCCAGTGTAGAAGCTGATTaGGCGGTGCTCATGTTTCCTGCAGTGGAGGGTGAGAAGGATACC +
Preference number: 1 (lower is better)
Translates to: GSCQHNMACSSVEAD*AVLMFPAVEGEKDT
Trigger: GGTATCCTTCTCACCCTCCACTGCAGGAAACATGAGCACCGCTCAATCAGCTTCTACACTGGAGCAGGCCATGTTGTGCTGGCAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp AAACTGAAGCTCCAACTCTCCTGGACTGAGTTGCATGCTGTCTGGTaGCGTCTTGCCTTGGGTCTCCCATCTTTCTCTGGCCGTTGCCCC +
Preference number: 1 (lower is better)
Translates to: KLKLQLSWTELHAVW*RLALGLPSFSGRCP
Trigger: GGGGCAACGGCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCTTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp CCCACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTaGCTCAACGAGCCAGCCCCTGCACAAAACCCTGGAGGTGGGACA +
Preference number: 1 (lower is better)
Translates to: PTVQKATASLTPLSN*LNEPAPAQNPGGGT
Trigger: TGTCCCACCTCCAGGGTTTTGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp GTGGCGGGTGACCGGTACATACTTACCCACTGTTCAGAAGGCTACTaGCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCC +
Preference number: 1 (lower is better)
Translates to: VAGDRYILTHCSEGY*QFDSSVKLPQRASP
Trigger: GGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGTGGGTAAGTATGTACCGGTCACCCGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 90 bp AAAGGGGCTGGGATGGAAGAAACTGAAGCTCCAACTCTCCTGGACTaGGTTGCATGCTGTCTGGTGCCGTCTTGCCTTGGGTCTCCCATC +
Preference number: 1 (lower is better)
Translates to: KGAGMEETEAPTLLD*VACCLVPSCLGSPI
Trigger: GATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCTTCAGTTTCTTCCATCCCAGCCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 90 bp CAGCATCAGCCTGAGTCCTCTGCTGGATGTAAAGGGGGTGGCGGGTaGCCGGTACATACTTACCCACTGTTCAGAAGGCTACTGCCAGTT +
Preference number: 1 (lower is better)
Translates to: QHQPESSAGCKGGGG*PVHTYPLFRRLLPV
Trigger: AACTGGCAGTAGCCTTCTGAACAGTGGGTAAGTATGTACCGGTCACCCGCCACCCCCTTTACATCCAGCAGAGGACTCAGGCTGATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 90 bp TTCACACGCCCCTGGATTTGGCAGCCAGGGACACCAAGAGTGTGCTaGTTCAGACCTTCCTTGGCAACACTGACCACAAGATCACAGGTG +
Preference number: 1 (lower is better)
Translates to: FTRPWIWQPGTPRVC*FRPSLATLTTRSQV
Trigger: CACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGGTCTGAATCAGCACACTCTTGGTGTCCCTGGCTGCCAAATCCAGGGGCGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp GGGGCAGACATTTTGACAAGGCAGGGAAGAGCTGGGTTATCTAGCTaGAGAGGATGGTCAGGAGGGTTCTGTAGAGATCACGACAGTGGG +
Preference number: 1 (lower is better)
Translates to: GADILTRQGRAGLSS*RGWSGGFCRDHDSG
Trigger: CCCACTGTCGTGATCTCTACAGAACCCTCCTGACCATCCTCTCCAGCTAGATAACCCAGCTCTTCCCTGCCTTGTCAAAATGTCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp AAGAAACTGAAGCTCCAACTCTCCTGGACTGAGTTGCATGCTGTCTaGTGCCGTCTTGCCTTGGGTCTCCCATCTTTCTCTGGCCGTTGC +
Preference number: 1 (lower is better)
Translates to: KKLKLQLSWTELHAV*CRLALGLPSFSGRC
Trigger: GCAACGGCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCTTCAGTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp AAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGATaGTTGAAAGCAGGAGGAAACCAGGGAGACAAATATGTGCCACGG +
Preference number: 1 (lower is better)
Translates to: KALDPHGMKHQGCMG*LKAGGNQGDKYVPR
Trigger: CCGTGGCACATATTTGTCTCCCTGGTTTCCTCCTGCTTTCAAGCATCCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 90 bp GATGATCTTAAATGTTGGAATAATGGCCAGAGAGGGGAGGCTCCTTaGCTACTACAGTCGGTCAGGAAGTGGCTGTGCCAGAGCCTGTGC +
Preference number: 1 (lower is better)
Translates to: DDLKCWNNGQRGEAP*LLQSVRKWLCQSLC
Trigger: GCACAGGCTCTGGCACAGCCACTTCCTGACCGACTGTAGTAGGCAAGGAGCCTCCCCTCTCTGGCCATTATTCCAACATTTAAGATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp GGCCAAGAAAAGACACAATTTGCCCCAGGGCAGCCAGTATGTCCATaGCTTGACTGGAAGCACATGGAATCCACGCAGGGTTCTGGCTTA +
Preference number: 1 (lower is better)
Translates to: GQEKTQFAPGQPVCP*LDWKHMESTQGSGL
Trigger: TAAGCCAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGGCAAATTGTGTCTTTTCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR CCA 90 bp GGAAGGTTGTACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATaGTCTAGGATAGAAGGGCTCAGGATGGGCTTGTGCCAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: GRLYSGGSLRSLLMR*SRIEGLRMGLCQVL
Trigger: CAGGACCTGGCACAAGCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR TCA 90 bp AGAAAAGACACAATTTGCCCCAGGGCAGCCAGTATGTCCATGGCTTaGCTGGAAGCACATGGAATCCACGCAGGGTTCTGGCTTAATCAC +
Preference number: 1 (lower is better)
Translates to: RKDTICPRAASMSMA*LEAHGIHAGFWLNH
Trigger: GTGATTAAGCCAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGGCAAATTGTGTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR CCA 90 bp ATTTTGACAAGGCAGGGAAGAGCTGGGTTATCTAGCTGGAGAGGATaGTCAGGAGGGTTCTGTAGAGATCACGACAGTGGGGCAAAGGAT +
Preference number: 1 (lower is better)
Translates to: ILTRQGRAGLSSWRG*SGGFCRDHDSGAKD
Trigger: ATCCTTTGCCCCACTGTCGTGATCTCTACAGAACCCTCCTGACCATCCTCTCCAGCTAGATAACCCAGCTCTTCCCTGCCTTGTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp AAGACACAATTTGCCCCAGGGCAGCCAGTATGTCCATGGCTTGACTaGAAGCACATGGAATCCACGCAGGGTTCTGGCTTAATCACATTC +
Preference number: 1 (lower is better)
Translates to: KTQFAPGQPVCPWLD*KHMESTQGSGLITF
Trigger: GAATGTGATTAAGCCAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGGCAAATTGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR CCA 90 bp ACAGACTCAGCCAGCTGGACTGGAGCTGACTGCTTTACTGAACGATaGATTAATTTGGGGTGGCGAGACCAATTTGGAGACATACTTTGG +
Preference number: 1 (lower is better)
Translates to: TDSASWTGADCFTER*INLGWRDQFGDILW
Trigger: CCAAAGTATGTCTCCAAATTGGTCTCGCCACCCCAAATTAATCCATCGTTCAGTAAAGCAGTCAGCTCCAGTCCAGCTGGCTGAGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 90 bp TTCCTGCAGTGGAGGGTGAGAAGGATACCAATGTATTCCTGTGTCTaGATTGAAAAGCGTGAGTTCCACCTGCTGGGAATGATGAAGGGA +
Preference number: 1 (lower is better)
Translates to: FLQWRVRRIPMYSCV*IEKREFHLLGMMKG
Trigger: TCCCTTCATCATTCCCAGCAGGTGGAACTCACGCTTTTCAATTCAGACACAGGAATACATTGGTATCCTTCTCACCCTCCACTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 90 bp TTCCCCACCAGGAAAACTGGTGACAAGGACCTACATGATGCTGGCTaGTTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACAT +
Preference number: 1 (lower is better)
Translates to: FPTRKTGDKDLHDAG*LGGFKVTGNSMLPH
Trigger: ATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCATCATGTAGGTCCTTGTCACCAGTTTTCCTGGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR TCA 90 bp TTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGGTaGGATGCTTACAAGACAGTAGCAATCATCACTGTTCCAGAAAAG +
Preference number: 1 (lower is better)
Translates to: LGGFKVTGNSMLPHG*DAYKTVAIITVPEK
Trigger: CTTTTCTGGAACAGTGATGATTGCTACTGTCTTGTAAGCATCTCACCCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR TCA 90 bp CATACTTTGGGAAACCTCAAACTAAGATCATGTACTGTATTTAACTaGGCAGATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTT +
Preference number: 1 (lower is better)
Translates to: HTLGNLKLRSCTVFN*ADEGWYCTKSQSGF
Trigger: AAATCCACTCTGCGATTTGGTACAGTACCAACCCTCATCTGCTCAGTTAAATACAGTACATGATCTTAGTTTGAGGTTTCCCAAAGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 90 bp TTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTTaGATTAAGGGTAAGTACTTACTACATTTAAGGACAAGTTCTGTT +
Preference number: 1 (lower is better)
Translates to: FNQQKALSVRVRHGI*IKGKYLLHLRTSSV
Trigger: AACAGAACTTGTCCTTAAATGTAGTAAGTACTTACCCTTAATCCAAATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGATCCATCAGGCCTGCTaGCGCTCTCCACCCCAGCGG +
Preference number: 2 (lower is better)
Translates to: HRQPGCRADILRPSAALMIHQAC*RSPPQR
Trigger: CCGCTGGGGTGGAGAGCGGCAGCAGGCCTGATGGAT...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCCACCCCAGCGGGGGATaGACATCTGTGCTCCCTCGC +
Preference number: 2 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLHPSGG*TSVLPR
Trigger: GCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTG...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCGCCCGGGCTTCCTGGTaGCCATTCAGACTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFARASW*PFRLLP
Trigger: TGGGAGGAGTCTGAATGGTCACCAGGAAGCCCGGGC...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 90 bp AGCTCCAACTCTCCTGGACTGAGTTGCATGCTGTCTGGTGCCGTCTaGCCTTGGGTCTCCCATCTTTCTCTGGCCGTTGCCCCCACCACC +
Preference number: 2 (lower is better)
Translates to: SSNSPGLSCMLSGAV*PWVSHLSLAVAPTT
Trigger: GGTGGTGGGGGCAACGGCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGGGCATCCTGGTCACCTaGAGCACCTCCTTCACCACC +
Preference number: 2 (lower is better)
Translates to: HRQPGCRADILRPSAALMGILVT*STSFTT
Trigger: GGTGGTGAAGGAGGTGCTGCAGGTGACCAGGATGCC...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCAGTCGGTCAGGAAGTaGCTGTGCCAGAGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: GGGNARPDFQSASFHPSGQSVRK*LCQSLC
Trigger: GCACAGGCTCTGGCACAGCCACTTCCTGACCGACTG...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 90 bp CAACTCTCCTGGACTGAGTTGCATGCTGTCTGGTGCCGTCTTGCCTaGGGTCTCCCATCTTTCTCTGGCCGTTGCCCCCACCACCTTTCC +
Preference number: 2 (lower is better)
Translates to: QLSWTELHAVWCRLA*GLPSFSGRCPHHLS
Trigger: GGAAAGGTGGTGGGGGCAACGGCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGGGGGATGGACATCTGTaGTCCCTCGCAGTACACTGC +
Preference number: 2 (lower is better)
Translates to: HRQPGCRADILRPSAALMGDGHL*SLAVHC
Trigger: GCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCC...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCGAGCTCTCCAGACCCTaGCTCACCTTACAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLELSRP*LTLQGR
Trigger: CCTTCCCTGTAAGGTGAGGCAGGGTCTGGAGAGCTC...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 90 bp TGTCTGGTGCCGTCTTGCCTTGGGTCTCCCATCTTTCTCTGGCCGTaGCCCCCACCACCTTTCCTACTCTGGCAAACCCCCAAATCAACC +
Preference number: 2 (lower is better)
Translates to: CLVPSCLGSPIFLWP*PPPPFLLWQTPKST
Trigger: GGTTGATTTGGGGGTTTGCCAGAGTAGGAAAGGTGGTGGGGGCAACGGCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGCCAACTCTCCTGGACTaGGTTGCATGCTGTCTGGTG +
Preference number: 2 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQPTLLD*VACCLV
Trigger: CACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGG...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGTCCCTCGCAGTACACTaGGGACCCAGGAGGTCCCCT +
Preference number: 2 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGSLAVH*GPRRSP
Trigger: AGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGA...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCTCAGACTCCTCCCACTaGTTGTCCCTGTGGAGGACA +
Preference number: 2 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFSDSSH*LSLWRT
Trigger: TGTCCTCCACAGGGACAAGCAGTGGGAGGAGTCTGA...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTTACACCAGGGTGGGGTaGCTCAAATTGACCCCCTCT +
Preference number: 2 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPYTRVG*LKLTPS
Trigger: AGAGGGGGTCAATTTGAGGCACCCCACCCTGGTGTA...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR-3UTR CCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGGTGGGGGAGGGCAATaGATGAACAGACTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: ETLGRISRVPHFTHPGILGGGGQ*MNRLSQ
Trigger: CTGGCTGAGTCTGTTCATCCATTGCCCTCCCCCACC...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAGGAGTCTCGCTCTGTTaGCCAAGCTGGAGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTGVSLC*PSWRVQ
Trigger: CTGCACTCTCCAGCTTGGGCAACAGAGCGAGACTCC...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGGACACCTCATGTCTCTaGGCCGGGAAGCCACGATCC +
Preference number: 2 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGDTSCL*AGKPRS
Trigger: GGATCGTGGCTTCCCGGCCCAGAGACATGAGGTGTC...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 90 bp GCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGATGCTaGAAAGCAGGAGGAAACCAGGGAGACAAATATGTGCCACGGGCG +
Preference number: 2 (lower is better)
Translates to: ALDPHGMKHQGCMGC*KAGGNQGDKYVPRA
Trigger: CGCCCGTGGCACATATTTGTCTCCCTGGTTTCCTCCTGCTTTCAAGCATCCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 90 bp GGGCTGGGATGGAAGAAACTGAAGCTCCAACTCTCCTGGACTGAGTaGCATGCTGTCTGGTGCCGTCTTGCCTTGGGTCTCCCATCTTTC +
Preference number: 2 (lower is better)
Translates to: GLGWKKLKLQLSWTE*HAVWCRLALGLPSF
Trigger: GAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCTTCAGTTTCTTCCATCCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGTGTTGCTCCTGTCCCTaGAAAAGGAGGTCAAGATGG +
Preference number: 2 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQCCSCP*KRRSRW
Trigger: CCATCTTGACCTCCTTTTTCAGGGACAGGAGCAACA...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACATTGCATGCTGTCTGGTaGCGTCTTGCCTTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTLHAVW*RLALGL
Trigger: GAGACCCAAGGCAAGACGGCACCAGACAGCATGCAA...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCAAGCTGATTGAGCGGTaGTCATGTTTCCTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFKLIER*SCFLQW
Trigger: CCACTGCAGGAAACATGAGCACCGCTCAATCAGCTT...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGGCCCTCTGTAGAGACTaGCATTCTATCCACTTCTGG +
Preference number: 2 (lower is better)
Translates to: GGGNARPDFQSASFHPSGALCRD*HSIHFW
Trigger: CCAGAAGTGGATAGAATGCCAGTCTCTACAGAGGGC...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGAGCAGTATATCTAGCTaGTGTCCACAGTGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: HRQPGCRADILRPSAALMSSISS*CPQWPA
Trigger: AGCAGGCCACTGTGGACACCAGCTAGATATACTGCT...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACATTGGGGCAGACATTTTaGCAAGGCAGGGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTLGQTF*QGREEL
Trigger: CAGCTCTTCCCTGCCTTGTCAAAATGTCTGCCCCAA...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGACACCAAGAGTGTGCTaGTTCAGACCTTCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: ETLGRISRVPHFTHPGILTPRVC*FRPSLA
Trigger: TGCCAAGGAAGGTCTGAATCAGCACACTCTTGGTGT...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 90 bp GTGACCGGTACATACTTACCCACTGTTCAGAAGGCTACTGCCAGTTaGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAA +
Preference number: 2 (lower is better)
Translates to: VTGTYLPTVQKATAS*TPLSNCLNEPAPAQ
Trigger: TTGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGTGGGTAAGTATGTACCGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTATGTTGCCACATGGGTaGGATGCTTACAAGACAGTA +
Preference number: 2 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPMLPHG*DAYKTV
Trigger: TACTGTCTTGTAAGCATCTCACCCATGTGGCAACAT...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR-3UTR GCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCCTCATCCATCAGGCCTaGTGCCGCTCTCCACCCCAG +
Preference number: 2 (lower is better)
Translates to: PSLATLTTRSQVNPINNLLIHQA*CRSPPQ
Trigger: CTGGGGTGGAGAGCGGCAGCAGGCCTGATGGATGAG...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGTGGACTGGAGCTGACTaGTTTACTGAACGATGGATT +
Preference number: 2 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQWTGAD*FTERWI
Trigger: AATCCATCGTTCAGTAAAGCAGTCAGCTCCAGTCCA...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp GGAGGCAGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGGCTTGTGCCAGGTCCTaGCCAAGCACTTTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: GGSLRSLLMRWSRIEGLRACARS*PSTLPG
Trigger: TCCAGGCAAAGTGCTTGGCCAGGACCTGGCACAAGC...CCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR GCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGGTGTCCAATTTGTCCTaGTTCCCAGAGCTGCATGGT +
Preference number: 2 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGVSNLS*FPELHG
Trigger: ACCATGCAGCTCTGGGAAGCAGGACAAATTGGACAC...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp AGACTGAGGTCTGTGAACCAGTCCTGGACAACAATCACCACATGGCAGACCGTGCCTGGCCAAGCACTTTaGCTGGATTGTTCCACTGAA +
Preference number: 2 (lower is better)
Translates to: RLRSVNQSWTTITTWQTVPGQAL*LDCSTE
Trigger: TTCAGTGGAACAATCCAGGCAAAGTGCTTGGCCAGG...CACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR GCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGGGCTTCACAAGGTCATaGCGATCTAAGGGACGCCCC +
Preference number: 2 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWGFTRS*RSKGRP
Trigger: GGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCC...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR-3UTR CCA 90 bp AGACTGAGGTCTGTGAACCAGTCCTGGACAACAATCACCACATGGCAGACCGTGTTGACTGGAAGCACATaGAATCCACGCAGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: RLRSVNQSWTTITTWQTVLTGST*NPRRVL
Trigger: CAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAA...CACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR CCA 90 bp AGACTGAGGTCTGTGAACCAGTCCTGGACAACAATCACCACATGGCAGACCGTGGGGAAGGTTGTACTCTaGAGGCAGTTTGCGGTCATT +
Preference number: 2 (lower is better)
Translates to: RLRSVNQSWTTITTWQTVGKVVL*RQFAVI
Trigger: AATGACCGCAAACTGCCTCCAGAGTACAACCTTCCC...CACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR TCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTCTTCTTAGCAGAGACTaGTCTCCATCTGCCCGCAAG +
Preference number: 2 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFLLSRD*SPSARK
Trigger: CTTGCGGGCAGATGGAGATCAGTCTCTGCTAAGAAG...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTACCCAGGAGGTCCCCTaGATGACATTCCTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: ATVFNQQKALSVRVRHGITQEVP*MTFLSL
Trigger: CAAGGAGAGGAATGTCATGCAGGGGACCTCCTGGGT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTAAAAGGAGGTCAAGATaGAGCCCGGGCTTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: ATVFNQQKALSVRVRHGIKRRSR*SPGFLV
Trigger: CACCAGGAAGCCCGGGCTCCATCTTGACCTCCTTTT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGAACGATGGATTAATTTaGGGTGGCGAGACCAATTTG +
Preference number: 2 (lower is better)
Translates to: ETLGRISRVPHFTHPGILNDGLI*GGETNL
Trigger: CAAATTGGTCTCGCCACCCCAAATTAATCCATCGTT...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp AGACTGAGGTCTGTGAACCAGTCCTGGACAACAATCACCACATGGCAGACCGTGAGGAAGGCAGCAATCTaGAGTGACTGCATTTCAACG +
Preference number: 2 (lower is better)
Translates to: RLRSVNQSWTTITTWQTVRKAAI*SDCIST
Trigger: CGTTGAAATGCAGTCACTCCAGATTGCTGCCTTCCT...CACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR GCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCTGGTTCCCATCTGCTaGAGGGCCCTGCTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKLVPIC*RALLSV
Trigger: CACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR-3UTR CCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCATCTCAGGTTTGGGGTaGGATCGCTCACAGTCACCC +
Preference number: 2 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFISGLG*DRSQSP
Trigger: GGGTGACTGTGAGCGATCCCACCCCAAACCTGAGAT...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCAGCTGGAGAGTGCAGTaGCGTGATCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFSWRVQ*RDLGSL
Trigger: CAGTGAGCCAAGATCACGCCACTGCACTCTCCAGCT...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTTACACAGGGGAGGCTTaGTGCCACCCCAGGAAACAG +
Preference number: 2 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSYTGEA*CHPRKQ
Trigger: CTGTTTCCTGGGGTGGCATCAAGCCTCCCCTGTGTA...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCGCTGTATGGGATGCTTaGAAGCAGGAGGAAACCAGG +
Preference number: 2 (lower is better)
Translates to: PSLATLTTRSQVNPINNLAVWDA*KQEETR
Trigger: CCTGGTTTCCTCCTGCTTTCAAGCATCCCATACAGC...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGAGACTGATCTCCATCTaGCCGCAAGGGCTGGGTGTC +
Preference number: 2 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWRLISI*PQGLGV
Trigger: GACACCCAGCCCTTGCGGGCAGATGGAGATCAGTCT...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCAGACACGAGGGTAGTTaGTGTACTCAGCTGCACCAG +
Preference number: 2 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFRHEGS*CTQLHQ
Trigger: CTGGTGCAGCTGAGTACAGCAACTACCCTCGTGTCT...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGACCCCATCTCAGGTTTaGGGTGGGATCGCTCACAGT +
Preference number: 2 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQTPSQV*GGIAHS
Trigger: ACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGT...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp AGTGTGGGGAAGGTTGTACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATGTGTCCATGGCTTGACTaGAAGCACATGGAATCCACG +
Preference number: 2 (lower is better)
Translates to: SVGKVVLWRQFAVIIDEMCPWLD*KHMEST
Trigger: CGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACA...CATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCCCCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR TCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGATGACTGTGTTTATTTaGACCACCAGATCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGMTVFI*TTRSVP
Trigger: TGGAACAGATCTGGTGGTTCAAATAAACACAGTCAT...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCAGAAAAGACACAATTTaGCCCAGGGCAGCCAGTATG +
Preference number: 2 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGRKDTI*PRAASM
Trigger: CATACTGGCTGCCCTGGGGCAAATTGTGTCTTTTCT...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR CCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTTGGATTAATTTGGGGTaGCGAGACCAATTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFWINLG*RDQFGD
Trigger: GTCTCCAAATTGGTCTCGCCACCCCAAATTAATCCA...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGACAAAACCCTGGAGGTaGGACAGGGCCTTTGGACCA +
Preference number: 2 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWTKPWR*DRAFGP
Trigger: TGGTCCAAAGGCCCTGTCCCACCTCCAGGGTTTTGT...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp AGTGTGGGGAAGGTTGTACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATGATCCACGCAGGGTTCTaGCTTAATCACATTCCAGGA +
Preference number: 2 (lower is better)
Translates to: SVGKVVLWRQFAVIIDEMIHAGF*LNHIPG
Trigger: TCCTGGAATGTGATTAAGCCAGAACCCTGCGTGGAT...CATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCCCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR CCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTCACACAGGTGGTAGATaGCAAGGCTGGGATCTGAAC +
Preference number: 2 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSHTGGR*QGWDLN
Trigger: GTTCAGATCCCAGCCTTGCCATCTACCACCTGTGTG...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGTGGGATGGAAGAAACTaGAGCTCCAACTCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWWDGRN*SSNSPG
Trigger: TCCAGGAGAGTTGGAGCTTCAGTTTCTTCCATCCCA...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCGTTGCTGTACTCAGCTaGACCAGTGTATTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFVAVLS*TSVFSH
Trigger: ATGGGAAAATACACTGGTGCAGCTGAGTACAGCAAC...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR GCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCAGGAAACAGCATGTTaGCACATGGGTGAGATGCTT +
Preference number: 2 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKQETAC*HMGEML
Trigger: AAGCATCTCACCCATGTGGCAACATGCTGTTTCCTG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR-3UTR CCA 90 bp ACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGGATGATCTTAAATGTTaGAATAATGGCCAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: TVQKATASLTPLSNCLNEDDLKC*NNGQRG
Trigger: CCCTCTCTGGCCATTATTCCAACATTTAAGATCATC...CTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGGTAACTGTCTTTAAGTaGGAGCAGAAGACACGAGGG +
Preference number: 2 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWVTVFK*EQKTRG
Trigger: CCCTCGTGTCTTCTGCTCTCACTTAAAGACAGTTAC...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR TCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCAAGAACAGGCTTGCATaGCTGTGTTTATTTGAACCA +
Preference number: 2 (lower is better)
Translates to: PSLATLTTRSQVNPINNLKNRLA*LCLFEP
Trigger: TGGTTCAAATAAACACAGTCATGCAAGCCTGTTCTT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCACTGAGGGTAGGTTCTaGATTTACATTAAAGGTGAG +
Preference number: 2 (lower is better)
Translates to: PSLATLTTRSQVNPINNLTEGRF*IYIKGE
Trigger: CTCACCTTTAATGTAAATCCAGAACCTACCCTCAGT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp CTGCCGCTCTCCACCCCAGCGGGGGATGGACATCTGTaGTCCCTCGCAGTACACTGCGGACCCAGGAGGTCC +
Preference number: 3 (lower is better)
Translates to: LPLSTPAGDGHL*SLAVHCGPRRS
Trigger: GGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGGAGAGCGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp TGGGCCGGGAAGCCACGATCCCTCATCCATCAGGCCTaGTGCCGCTCTCCACCCCAGCGGGGGATGGACATC +
Preference number: 3 (lower is better)
Translates to: WAGKPRSLIHQA*CRSPPQRGMDI
Trigger: GATGTCCATCCCCCGCTGGGGTGGAGAGCGGCAGCAGGCCTGATGGATGAGGGATCGTGGCTTCCCGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp ATCAGGCCTGCTGCCGCTCTCCACCCCAGCGGGGGATaGACATCTGTGCTCCCTCGCAGTACACTGCGGACC +
Preference number: 3 (lower is better)
Translates to: IRPAAALHPSGG*TSVLPRSTLRT
Trigger: GGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGGAGAGCGGCAGCAGGCCTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp GTGGAGGACACAGGACGGGCTACCCCATCTCAGGTTTaGGGTGGGATCGCTCACAGTCACCCCCGGAACAGC +
Preference number: 3 (lower is better)
Translates to: VEDTGRATPSQV*GGIAHSHPRNS
Trigger: GCTGTTCCGGGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGTGTCCTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp GCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATaGCAGGCGCTTGAGCCCAGGCAGCTGCCAGCACAA +
Preference number: 3 (lower is better)
Translates to: AGLTFLGQVLRS*QALEPRQLPAQ
Trigger: TTGTGCTGGCAGCTGCCTGGGCTCAAGCGCCTGTCATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp TGCTGCGCTCATGACAGGCGCTTGAGCCCAGGCAGCTaGCAGCACAACATGGCCTGCTCCAGTGTAGAAGCT +
Preference number: 3 (lower is better)
Translates to: CCAHDRRLSPGS*QHNMACSSVEA
Trigger: AGCTTCTACACTGGAGCAGGCCATGTTGTGCTGGCAGCTGCCTGGGCTCAAGCGCCTGTCATGAGCGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp TCACCTGCAGCACCTCCTTCACCACCATCTACCGGATaGTTCACACGCCCCTGGATTTGGCAGCCAGGGACA +
Preference number: 3 (lower is better)
Translates to: SPAAPPSPPSTG*FTRPWIWQPGT
Trigger: TGTCCCTGGCTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGCTGCAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp GACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTaGACAAAACCCTGGAGGTGGGACAGGGCCTTTGGA +
Preference number: 3 (lower is better)
Translates to: DSSVKLPQRASP*TKPWRWDRAFG
Trigger: TCCAAAGGCCCTGTCCCACCTCCAGGGTTTTGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp CTGGTGCCGTCTTGCCTTGGGTCTCCCATCTTTCTCTaGCCGTTGCCCCCACCACCTTTCCTACTCTGGCAA +
Preference number: 3 (lower is better)
Translates to: LVPSCLGSPIFL*PLPPPPFLLWQ
Trigger: TTGCCAGAGTAGGAAAGGTGGTGGGGGCAACGGCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp AAACTGCCTCAACGAGCCAGCCCCTGCACAAAACCCTaGAGGTGGGACAGGGCCTTTGGACCAAGGTCACCA +
Preference number: 3 (lower is better)
Translates to: KLPQRASPCTKP*RWDRAFGPRSP
Trigger: TGGTGACCTTGGTCCAAAGGCCCTGTCCCACCTCCAGGGTTTTGTGCAGGGGCTGGCTCGTTGAGGCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp GTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTaGAGCACCTCCTTCACCACCATCTACCGGATGCTT +
Preference number: 3 (lower is better)
Translates to: VPHFTHPGILVT*STSFTTIYRML
Trigger: AAGCATCCGGTAGATGGTGGTGAAGGAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp CTTGTCCAATGCCACACAGGTGGTAGATGGCAAGGCTaGGATCTGAACATAGGCAGCCTGGCTGCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: LVQCHTGGRWQG*DLNIGSLAAGL
Trigger: CAGCCCTGCAGCCAGGCTGCCTATGTTCAGATCCCAGCCTTGCCATCTACCACCTGTGTGGCATTGGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp AAAGTGTGTGCCACCTGCCCCCTCTTGCTCCTGCTCTaGGCATGTGAAGTACCTGCTCCCAGTTCACCTTCC +
Preference number: 3 (lower is better)
Translates to: KVCATCPLLLLL*ACEVPAPSSPS
Trigger: GGAAGGTGAACTGGGAGCAGGTACTTCACATGCCCAGAGCAGGAGCAAGAGGGGGCAGGTGGCACACACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp GAAAAAGGAGGTCAAGATGGAGCCCGGGCTTCCTGGTaGCCATTCAGACTCCTCCCACTGCTTGTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: EKGGQDGARASW*PFRLLPLLVPV
Trigger: CACAGGGACAAGCAGTGGGAGGAGTCTGAATGGTCACCAGGAAGCCCGGGCTCCATCTTGACCTCCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp CTGCCAGCACAACATGGCCTGCTCCAGTGTAGAAGCTaGTTGAGCGGTGCTCATGTTTCCTGCAGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: LPAQHGLLQCRS*LSGAHVSCSGG
Trigger: CCCTCCACTGCAGGAAACATGAGCACCGCTCAATCAGCTTCTACACTGGAGCAGGCCATGTTGTGCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp CTCCAACTCTCCTGGACTGAGTTGCATGCTGTCTGGTaGCGTCTTGCCTTGGGTCTCCCATCTTTCTCTGGC +
Preference number: 3 (lower is better)
Translates to: LQLSWTELHAVW*RLALGLPSFSG
Trigger: GCCAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp GTAAGTTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATaGCAGCACCATGCTTCTGGTTCAGCCTGCAGAACT +
Preference number: 3 (lower is better)
Translates to: VSFLRPPQKPSR*QHHASGSACRT
Trigger: AGTTCTGCAGGCTGAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp GTTTCAAAGTGTGTGCCACCTGCCCCCTCTTGCTCCTaGTCTGGGCATGTGAAGTACCTGCTCCCAGTTCAC +
Preference number: 3 (lower is better)
Translates to: VSKCVPPAPSCS*SGHVKYLLPVH
Trigger: GTGAACTGGGAGCAGGTACTTCACATGCCCAGAGCAGGAGCAAGAGGGGGCAGGTGGCACACACTTTGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp TTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTaGTCACCTGCAGCACCTCCTTCACCACCATCTACC +
Preference number: 3 (lower is better)
Translates to: FPECLISPIRAS*SPAAPPSPPST
Trigger: GGTAGATGGTGGTGAAGGAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp GGGATGGAAGAAACTGAAGCTCCAACTCTCCTGGACTaGGTTGCATGCTGTCTGGTGCCGTCTTGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: GMEETEAPTLLD*VACCLVPSCLG
Trigger: CCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCTTCAGTTTCTTCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp CCTGAGTCCTCTGCTGGATGTAAAGGGGGTGGCGGGTaGCCGGTACATACTTACCCACTGTTCAGAAGGCTA +
Preference number: 3 (lower is better)
Translates to: PESSAGCKGGGG*PVHTYPLFRRL
Trigger: TAGCCTTCTGAACAGTGGGTAAGTATGTACCGGTCACCCGCCACCCCCTTTACATCCAGCAGAGGACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp CAGCACAACATGGCCTGCTCCAGTGTAGAAGCTGATTaGGCGGTGCTCATGTTTCCTGCAGTGGAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: QHNMACSSVEAD*AVLMFPAVEGE
Trigger: CTCACCCTCCACTGCAGGAAACATGAGCACCGCTCAATCAGCTTCTACACTGGAGCAGGCCATGTTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp ACAATTTGCCCCAGGGCAGCCAGTATGTCCATGGCTTaGCTGGAAGCACATGGAATCCACGCAGGGTTCTGG +
Preference number: 3 (lower is better)
Translates to: TICPRAASMSMA*LEAHGIHAGFW
Trigger: CCAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGGCAAATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR GCA 72 bp CAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTaGCTCAACGAGCCAGCCCCTGCACAAAACCCTGGA +
Preference number: 3 (lower is better)
Translates to: QKATASLTPLSN*LNEPAPAQNPG
Trigger: TCCAGGGTTTTGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp AGGCAGGGAAGAGCTGGGTTATCTAGCTGGAGAGGATaGTCAGGAGGGTTCTGTAGAGATCACGACAGTGGG +
Preference number: 3 (lower is better)
Translates to: RQGRAGLSSWRG*SGGFCRDHDSG
Trigger: CCCACTGTCGTGATCTCTACAGAACCCTCCTGACCATCCTCTCCAGCTAGATAACCCAGCTCTTCCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp TCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTaGTTCAGCCTGCAGAACTCTGAGCCAATTAAACCC +
Preference number: 3 (lower is better)
Translates to: SPEAEQMPAPCF*FSLQNSEPIKP
Trigger: GGGTTTAATTGGCTCAGAGTTCTGCAGGCTGAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp ATCTCATGTCAACTTGTAGTTTGTAGTCACCACTGTTaGAGGTGGGGCCTGGCGGGAGGGACGGCATCATGG +
Preference number: 3 (lower is better)
Translates to: ISCQLVVCSHHC*RWGLAGGTASW
Trigger: CCATGATGCCGTCCCTCCCGCCAGGCCCCACCTCCAACAGTGGTGACTACAAACTACAAGTTGACATGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp CCCTGGATTTGGCAGCCAGGGACACCAAGAGTGTGCTaGTTCAGACCTTCCTTGGCAACACTGACCACAAGA +
Preference number: 3 (lower is better)
Translates to: PWIWQPGTPRVC*FRPSLATLTTR
Trigger: TCTTGTGGTCAGTGTTGCCAAGGAAGGTCTGAATCAGCACACTCTTGGTGTCCCTGGCTGCCAAATCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp AAATGTTGGAATAATGGCCAGAGAGGGGAGGCTCCTTaGCTACTACAGTCGGTCAGGAAGTGGCTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: KCWNNGQRGEAP*LLQSVRKWLCQ
Trigger: CTGGCACAGCCACTTCCTGACCGACTGTAGTAGGCAAGGAGCCTCCCCTCTCTGGCCATTATTCCAACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp GTTGTAAGAGCTCGTGGTTTCAAAGTGTGTGCCACCTaGCCCCTCTTGCTCCTGCTCTGGGCATGTGAAGTA +
Preference number: 3 (lower is better)
Translates to: VVRARGFKVCAT*PLLLLLWACEV
Trigger: TACTTCACATGCCCAGAGCAGGAGCAAGAGGGGGCAGGTGGCACACACTTTGAAACCACGAGCTCTTACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp AAGCTCCAACTCTCCTGGACTGAGTTGCATGCTGTCTaGTGCCGTCTTGCCTTGGGTCTCCCATCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: KLQLSWTELHAV*CRLALGLPSFS
Trigger: AGAGAAAGATGGGAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp AAGACACAATTTGCCCCAGGGCAGCCAGTATGTCCATaGCTTGACTGGAAGCACATGGAATCCACGCAGGGT +
Preference number: 3 (lower is better)
Translates to: KTQFAPGQPVCP*LDWKHMESTQG
Trigger: ACCCTGCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGGCAAATTGTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR CAA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTTACCCCATCTCAGGTTaGGGGTGGGATCGCTCACAG +
Preference number: 3 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFYPISG*GWDRSQ
Trigger: CTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTA...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp CATACTTACCCACTGTTCAGAAGGCTACTGCCAGTTTaGCTCCTCTGTCAAACTGCCTCAACGAGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: HTYPLFRRLLPV*LLCQTASTSQP
Trigger: GGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGTGGGTAAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp CAGGATGGGCTTGTGCCAGGTCCTGGCCAAGCACTTTaGCTGGATTGTTCCACTGAATCCTTGAAACTCCTA +
Preference number: 3 (lower is better)
Translates to: QDGLVPGPGQAL*LDCSTESLKLL
Trigger: TAGGAGTTTCAAGGATTCAGTGGAACAATCCAGGCAAAGTGCTTGGCCAGGACCTGGCACAAGCCCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR CCA 72 bp GCCAGCTGGACTGGAGCTGACTGCTTTACTGAACGATaGATTAATTTGGGGTGGCGAGACCAATTTGGAGAC +
Preference number: 3 (lower is better)
Translates to: ASWTGADCFTER*INLGWRDQFGD
Trigger: GTCTCCAAATTGGTCTCGCCACCCCAAATTAATCCATCGTTCAGTAAAGCAGTCAGCTCCAGTCCAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp AGGTCTGTGAACCAGTCCTGGACAACAATCACCACATaGCAGACCGTGAAAAGGAAGGCAGCAATCTGGAGT +
Preference number: 3 (lower is better)
Translates to: RSVNQSWTTITT*QTVKRKAAIWS
Trigger: ACTCCAGATTGCTGCCTTCCTTTTCACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR CAA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGATTTGGAGACATACTTaGGGAAACCTCAAACTAAGA +
Preference number: 3 (lower is better)
Translates to: GGGNARPDFQSASFHPSGIWRHT*GNLKLR
Trigger: TCTTAGTTTGAGGTTTCCCAAAGTATGTCTCCAAAT...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CAA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGGTGGGGTGCCTCAAATaGACCCCCTCTGCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKVGCLK*TPSAKS
Trigger: GCTCTTTGCAGAGGGGGTCAATTTGAGGCACCCCAC...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR GCA 72 bp GACCGGTACATACTTACCCACTGTTCAGAAGGCTACTaGCAGTTTGACTCCTCTGTCAAACTGCCTCAACGA +
Preference number: 3 (lower is better)
Translates to: DRYILTHCSEGY*QFDSSVKLPQR
Trigger: TCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGTGGGTAAGTATGTACCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp ATTTTGACAAGGCAGGGAAGAGCTGGGTTATCTAGCTaGAGAGGATGGTCAGGAGGGTTCTGTAGAGATCAC +
Preference number: 3 (lower is better)
Translates to: ILTRQGRAGLSS*RGWSGGFCRDH
Trigger: GTGATCTCTACAGAACCCTCCTGACCATCCTCTCCAGCTAGATAACCCAGCTCTTCCCTGCCTTGTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp ATGGGGGTGGTTTCTCATGGTTCAGCGCCAGCCCCTTaGTACTGTCCTCACAATAGTGAATCTGTTGTAAGA +
Preference number: 3 (lower is better)
Translates to: MGVVSHGSAPAP*YCPHNSESVVR
Trigger: TCTTACAACAGATTCACTATTGTGAGGACAGTACCAAGGGGCTGGCGCTGAACCATGAGAAACCACCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp TACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATaGTCTAGGATAGAAGGGCTCAGGATGGGCTTGTGC +
Preference number: 3 (lower is better)
Translates to: YSGGSLRSLLMR*SRIEGLRMGLC
Trigger: GCACAAGCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR CAA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCGGCTGTATGGGATGCTaGAAAGCAGGAGGAAACCAG +
Preference number: 3 (lower is better)
Translates to: PSLATLTTRSQVNPINNLGCMGC*KAGGNQ
Trigger: CTGGTTTCCTCCTGCTTTCAAGCATCCCATACAGCC...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR GCA 72 bp CTGTCTTTAAGTGAGAGCAGAAGACACGAGGGTAGTTaGTGTACTCAGCTGCACCAGTGTATTTTCCCATCC +
Preference number: 3 (lower is better)
Translates to: LSLSESRRHEGS*CTQLHQCIFPS
Trigger: GGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTACCCTCGTGTCTTCTGCTCTCACTTAAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR-3UTR CAA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCAAGAAAAGACACAATTaGCCCCAGGGCAGCCAGTAT +
Preference number: 3 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGKKRHN*PQGSQY
Trigger: ATACTGGCTGCCCTGGGGCAAATTGTGTCTTTTCTT...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR CAA 90 bp AGACTGAGGTCTGTGAACCAGTCCTGGACAACAATCACCACATGGCAGACCGTGAGTTTGCGGTCATTATaGATGAGATGGTCTAGGATA +
Preference number: 3 (lower is better)
Translates to: RLRSVNQSWTTITTWQTVSLRSL*MRWSRI
Trigger: TATCCTAGACCATCTCATCAATAATGACCGCAAACT...CACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCTCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR-3UTR CAA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGAACATAAGAACAGGCTaGCATGACTGTGTTTATTTG +
Preference number: 3 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGNIRTG*HDCVYL
Trigger: CAAATAAACACAGTCATGCAAGCCTGTTCTTATGTT...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp TGGAGGGTGAGAAGGATACCAATGTATTCCTGTGTCTaGATTGAAAAGCGTGAGTTCCACCTGCTGGGAATG +
Preference number: 3 (lower is better)
Translates to: WRVRRIPMYSCV*IEKREFHLLGM
Trigger: CATTCCCAGCAGGTGGAACTCACGCTTTTCAATTCAGACACAGGAATACATTGGTATCCTTCTCACCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp AGGTCCTGGCCAAGCACTTTGCCTGGATTGTTCCACTaGATCCTTGAAACTCCTAAGAGGCTAAGTACAGTT +
Preference number: 3 (lower is better)
Translates to: RSWPSTLPGLFH*ILETPKRLSTV
Trigger: AACTGTACTTAGCCTCTTAGGAGTTTCAAGGATTCAGTGGAACAATCCAGGCAAAGTGCTTGGCCAGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR GCA 72 bp AGAGCAGAAGACACGAGGGTAGTTGCTGTACTCAGCTaGACCAGTGTATTTTCCCATCCAAAACATACACAG +
Preference number: 3 (lower is better)
Translates to: RAEDTRVVAVLS*TSVFSHPKHTQ
Trigger: CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTACCCTCGTGTCTTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp CTGGAGCTGACTGCTTTACTGAACGATGGATTAATTTaGGGTGGCGAGACCAATTTGGAGACATACTTTGGG +
Preference number: 3 (lower is better)
Translates to: LELTALLNDGLI*GGETNLETYFG
Trigger: CCCAAAGTATGTCTCCAAATTGGTCTCGCCACCCCAAATTAATCCATCGTTCAGTAAAGCAGTCAGCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CCA 72 bp CTGCATTTCAACGTAAGTGTGGGGAAGGTTGTACTCTaGAGGCAGTTTGCGGTCATTATTGATGAGATGGTC +
Preference number: 3 (lower is better)
Translates to: LHFNVSVGKVVL*RQFAVIIDEMV
Trigger: GACCATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCCCCACACTTACGTTGAAATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR TCA 72 bp AGGAAAACTGGTGACAAGGACCTACATGATGCTGGCTaGTTAGGAGGATTCAAAGTCACAGGAAACAGCATG +
Preference number: 3 (lower is better)
Translates to: RKTGDKDLHDAG*LGGFKVTGNSM
Trigger: CATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCATCATGTAGGTCCTTGTCACCAGTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR-3UTR CAA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTGAACGATGGATTAATTaGGGGTGGCGAGACCAATTT +
Preference number: 3 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSERWIN*GWRDQF
Trigger: AAATTGGTCTCGCCACCCCAAATTAATCCATCGTTC...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp CTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTaGGGCATGGTATTTGGATTAAGGGTAAGTACTTAC +
Preference number: 3 (lower is better)
Translates to: LYLTNRRHCLYG*GMVFGLRVSTY
Trigger: GTAAGTACTTACCCTTAATCCAAATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp TTCAAAGTCACAGGAAACAGCATGTTGCCACATGGGTaGGATGCTTACAAGACAGTAGCAATCATCACTGTT +
Preference number: 3 (lower is better)
Translates to: FKVTGNSMLPHG*DAYKTVAIITV
Trigger: AACAGTGATGATTGCTACTGTCTTGTAAGCATCTCACCCATGTGGCAACATGCTGTTTCCTGTGACTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
3UTR CCA 72 bp CAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTTaGATTAAGGGTAAGTACTTACTACATTTAAGGACA +
Preference number: 3 (lower is better)
Translates to: QKALSVRVRHGI*IKGKYLLHLRT
Trigger: TGTCCTTAAATGTAGTAAGTACTTACCCTTAATCCAAATACCATGCCTCACCCGTACAGACAGTGCCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR TCA 72 bp GGAAACCTCAAACTAAGATCATGTACTGTATTTAACTaGGCAGATGAGGGTTGGTACTGTACCAAATCGCAG +
Preference number: 3 (lower is better)
Translates to: GNLKLRSCTVFN*ADEGWYCTKSQ
Trigger: CTGCGATTTGGTACAGTACCAACCCTCATCTGCTCAGTTAAATACAGTACATGATCTTAGTTTGAGGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCACCCCAGCGGGGGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCACCCAAGCCACCCGCCTaGAAATGGCGTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPQRGMDICAPSQYTADPPKPPA*KWRLGA
Trigger: GGCCCCCAGACGCCATTTGCAGGCGGGTGGCTTGGG...TGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTCCCCTGCAACGCGGGCCCGAGCTaGGATCAGTTCCCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: GWTSVLPRSTLRTQEVPCNAGPS*DQFPQA
Trigger: CGCCTGAGGGAACTGATCTCAGCTCGGGCCCGCGTT...GCAGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCGGAGCCCGATGAGCTaGTGGACTCGTGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPRSPMS*WTRGWG
Trigger: CCCCCAGCCACGAGTCCAGCAGCTCATCGGGCTCCG...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GATCTGGAGAGGAGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTGGCTGCAGGGGGTGGTaGGGCGGTGCCCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: DLERRGFTRSCRSKGRPLGCRGW*GGALRG
Trigger: ACCCCTGAGGGCACCGCCCCACCACCCCCTGCAGCC...AAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCTCCTCTCCAGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CCACCCCAGCGGGGGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGACTTGCCTGTCCCCTaGAGGCCCAGGACACCAACC +
Preference number: 4 (lower is better)
Translates to: PPQRGMDICAPSQYTADPDLPVP*RPRTPT
Trigger: GGTTGGTGTCCTGGGCCTCCAGGGGACAGGCAAGTC...TGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTTCAGGCGACTCGTCCTaGGCATGCGCTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPSGDSS*ACAEGW
Trigger: CCAGCCCTCAGCGCATGCGCAGGACGAGTCGCCTGA...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp CCACCCCAGCGGGGGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGGGGTAGTACTCGGTaGCTTCATCGGAGCCCGATG +
Preference number: 4 (lower is better)
Translates to: PPQRGMDICAPSQYTADPGGSTR*LHRSPM
Trigger: CATCGGGCTCCGATGAAGGCACCGAGTACTACCCCC...TGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTCCCCTGCGGGGAGGGCAATGGATaGACAGACTCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GWTSVLPRSTLRTQEVPCGEGNG*TDSASW
Trigger: CCAGCTGGCTGAGTCTGTTCATCCATTGCCCTCCCC...GCAGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp CCTGTGGAGGACACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCAAGTGCTGCGCTCATaGCAGGCGCTTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PVEDTGRATPSQVWGGIAQVLRS*QALEPR
Trigger: CCTGGGCTCAAGCGCCTGTCATGAGCGCAGCACTTG...AGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGTGTCCTCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTGACAGGGTCCATGGCTaGTGGTGCGGCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPDRVHG*WCGSAH
Trigger: ATGGGCACTGCCGCACCAGCAGCCATGGACCCTGTC...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCCTGTGCCAGAGCCTGTaGTGGGCCTCCTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPLCQSL*WASCLP
Trigger: TGGGAGACAGGAGGCCCAGCACAGGCTCTGGCACAG...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCCTTCTCCAGAGGGGCTaGAGCAGGCGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLLLQRG*SRRGSR
Trigger: CCTGCTGCCCCGCCTGCTCCAGCCCCTCTGGAGAAG...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCTCGTGGCTGGGGGATaGGGTGGAGGGCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPLVAGG*GGGLHH
Trigger: ATGGTGAAGCCCTCCACCCCATCCCCCAGCCACGAG...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTAGCCCGATGAGCTGCTaGACTCGTGGCTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPSPMSC*TRGWGM
Trigger: CATCCCCCAGCCACGAGTCCAGCAGCTCATCGGGCT...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp GATCTGGAGAGGAGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTAACGCGGGCCCGAGCTaGGATCAGTTCCCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: DLERRGFTRSCRSKGRPLNAGPS*DQFPQA
Trigger: CGCCTGAGGGAACTGATCTCAGCTCGGGCCCGCGTT...AAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCTCCTCTCCAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTTTCATCGGAGCCCGATaGGCTGCTGGACTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPFIGAR*AAGLVA
Trigger: AGCCACGAGTCCAGCAGCTCATCGGGCTCCGATGAA...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGTCAGGCGACTCGTCCTaGGCATGCGCTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGSGDSS*ACAEGW
Trigger: CCAGCCCTCAGCGCATGCGCAGGACGAGTCGCCTGA...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGCTGCTGGTGCGGCAGTaGCCATGCCCCGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQLLVRQ*PCPGSG
Trigger: TCCAGAACCGGGGCATGGGCACTGCCGCACCAGCAG...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGTCCATGGCTGCTGGTaGGGCAGTGCCCATGCCCCG +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPVHGCW*GSAHAP
Trigger: CGGGGCATGGGCACTGCCGCACCAGCAGCCATGGAC...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGGACAGGGTCCATGGCTaGTGGTGCGGCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LPARAGCPICPASQSCMVDRVHG*WCGSAH
Trigger: ATGGGCACTGCCGCACCAGCAGCCATGGACCCTGTC...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCGGCATCCTGGTCACCTaGAGCACCTCCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPGILVT*STSFTT
Trigger: GGTGGTGAAGGAGGTGCTGCAGGTGACCAGGATGCC...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCACTTCTCCAGAGGGGCTaGAGCAGGCGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPLLQRG*SRRGSR
Trigger: CCTGCTGCCCCGCCTGCTCCAGCCCCTCTGGAGAAG...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTCCCCTGCCTTCCCCTCCTCCCGTaGCTTCATGAGAACGATGGG +
Preference number: 4 (lower is better)
Translates to: GWTSVLPRSTLRTQEVPCLPLLP*LHENDG
Trigger: CCCATCGTTCTCATGAAGCCACGGGAGGAGGGGAAG...GCAGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGCCACGACAGGGTCCATaGCTGCTGGTGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQPRQGP*LLVRQC
Trigger: GCACTGCCGCACCAGCAGCCATGGACCCTGTCGTGG...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCGAGCTGCTGGACTCGTaGCTGGGGGATGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLELLDS*LGDGVE
Trigger: CTCCACCCCATCCCCCAGCCACGAGTCCAGCAGCTC...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCACCCCAGCGGGGGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAACCCCATCTCAGGTTTaGGGTGGGATCGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: PPQRGMDICAPSQYTADPTPSQV*GGIAHS
Trigger: ACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGT...TGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGTCCTGCGCATGCGCTaGGGGCTGGAGCTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPVLRMR*GLELEN
Trigger: GTTCTCGAGCTCCAGCCCTCAGCGCATGCGCAGGAC...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp GCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCAAATTGGTGAGGATCGTGTGTaGCAGCTGTGGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: ADLRDAPFSLHQGGVPQIGEDRV*QLWPGH
Trigger: ATGGCCCGGCCACAGCTGTCACACACGATCCTCACC...AATTTGAGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GATCTGGAGAGGAGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTGTGCGGCAGTGCCCATaGCCCGGTTCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: DLERRGFTRSCRSKGRPLVRQCP*PGSGSG
Trigger: ACCAGATCCAGAACCGGGGCATGGGCACTGCCGCAC...AAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCTCCTCTCCAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTCCCCTGCACCAACTTGATGCTGTaGTTCATGCGCTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GWTSVLPRSTLRTQEVPCTNLML*FMRSGG
Trigger: GCCCCCAGAGCGCATGAAGCACAGCATCAAGTTGGT...GCAGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGAGGGAGACAAATATGTaGCACGGGCGGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPARAGCPICPASQSCMVRETNM*HGRQGV
Trigger: CACCCCCTGCCGCCCGTGGCACATATTTGTCTCCCT...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCTGTGGAGGACACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTAGAGGGGAGGCTCCTTaGCTACTACAGTCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PVEDTGRATPSQVWGGIARGEAP*LLQSVR
Trigger: CCTGACCGACTGTAGTAGGCAAGGAGCCTCCCCTCT...AGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGTGTCCTCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGCCACCCGCCTGCAAATaGCGTCTGGGGGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ETLGRISRVPHFTHPGILPPACK*RLGARN
Trigger: GTTCCTGGCCCCCAGACGCCATTTGCAGGCGGGTGG...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCACCACCCGCCTGCAAATaGCGTCTGGGGGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPPPACK*RLGARN
Trigger: GTTCCTGGCCCCCAGACGCCATTTGCAGGCGGGTGG...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCAACGCGGCTGCTGATTaGTTCTCGGGGCGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLNAAAD*FSGRGV
Trigger: CACACCGCGCCCCGAGAACCAATCAGCAGCCGCGTT...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGCCCAGAGAGATTCTaGGGGCCACCAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPGPERF*GPPEPG
Trigger: GCCTGGCTCTGGTGGCCCCCAGAATCTCTCTGGGCC...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTTCGATGCCACTGGTCTaGTTGCCCCCTCGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPSMPLV*LPPRSF
Trigger: GAAGGAACGAGGGGGCAACCAGACCAGTGGCATCGA...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCGGCTGGGGGATGGGGTaGAGGGCTTCACCATCTCTG +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLGWGMG*RASPSL
Trigger: CAGAGATGGTGAAGCCCTCCACCCCATCCCCCAGCC...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGCTCGTGGCTGGGGGATaGGGTGGAGGGCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQLVAGG*GGGLHH
Trigger: ATGGTGAAGCCCTCCACCCCATCCCCCAGCCACGAG...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGAGCTGCTGGACTCGTaGCTGGGGGATGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWELLDS*LGDGVE
Trigger: CTCCACCCCATCCCCCAGCCACGAGTCCAGCAGCTC...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCAGCCCGATGAGCTGCTaGACTCGTGGCTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLSPMSC*TRGWGM
Trigger: CATCCCCCAGCCACGAGTCCAGCAGCTCATCGGGCT...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCGCCATGGACATCACTTaGCTCCGGAGCTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPAMDIT*LRSLLT
Trigger: GGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGC...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCGCTGTGGCCGGGCCATaGACATCACTTGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFAVAGP*TSLGSG
Trigger: TCCGGAGCCAAGTGATGTCCATGGCCCGGCCACAGC...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGCCCATCCGGGCATCCTaGTCACCTGCAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQPIRAS*SPAAPP
Trigger: AGGAGGTGCTGCAGGTGACCAGGATGCCCGGATGGG...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGGGCAGTAGTTTGGCCTaGCCCACGACAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: HRQPGCRADILRPSAALMGSSLA*PTTGSM
Trigger: CATGGACCCTGTCGTGGGTCAGGCCAAACTACTGCC...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGTTCATCGGAGCCCGATaGGCTGCTGGACTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: HRQPGCRADILRPSAALMFIGAR*AAGLVA
Trigger: AGCCACGAGTCCAGCAGCTCATCGGGCTCCGATGAA...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCCCACCATCTACCGGATaGTTCACACGCCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPPPSTG*FTRPWI
Trigger: AATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGG...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTTACACCAGGGTGGGGTaGCTCAAATTGACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPYTRVG*LKLTPS
Trigger: AGAGGGGGTCAATTTGAGGCACCCCACCCTGGTGTA...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCGCCCCTAAGGAAAGCTaGGCCGAAGGAAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPAPKES*AEGRRG
Trigger: TCCTCTTCTTCCTTCGGCCCAGCTTTCCTTAGGGGC...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCCCTGCAAATGGCGTCTaGGGGCCAGGAACGTGGGAA +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFPANGV*GPGTWE
Trigger: TTCCCACGTTCCTGGCCCCCAGACGCCATTTGCAGG...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCTGCCTCACCTTACAGGGAAGGGCTTAGAGTCAGGGAAGAGGGGCCTGTTGCTCTGGGGGCAGTAGTTTaGCCTGACCCACGACAGGGT +
Preference number: 4 (lower is better)
Translates to: PASPYREGLRVREEGPVALGAVV*PDPRQG
Trigger: ACCCTGTCGTGGGTCAGGCCAAACTACTGCCCCCAG...AGCAACAGGCCCCTCTTCCCTGACTCTAAGCCCTTCCCTGTAAGGTGAGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCAGAAGTCGATGCCACTaGTCTGGTTGCCCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPRSRCH*SGCPLV
Trigger: AACGAGGGGGCAACCAGACCAGTGGCATCGACTTCT...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCAAATTGACTGGAAACTGGGGTaGCCACGATACCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ADLRDAPFSLHQGGVPQIDWKLG*PRYPGS
Trigger: GCTGCCTGGGTATCGTGGCCACCCCAGTTTCCAGTC...AATTTGAGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTTTGCTCACCAAGGACTaGAAACTGGGGTGGCCACGA +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPLLTKD*KLGWPR
Trigger: TCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAA...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGCTGTGGCCGGGCCATaGACATCACTTGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPAVAGP*TSLGSG
Trigger: TCCGGAGCCAAGTGATGTCCATGGCCCGGCCACAGC...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCAGCTGGAGAGTGCAGTaGCGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPSWRVQ*RDLGSL
Trigger: CAGTGAGCCAAGATCACGCCACTGCACTCTCCAGCT...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCGCTGGGTTATCTAGCTaGAGAGGATGGTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPAGLSS*RGWSGG
Trigger: CCCTCCTGACCATCCTCTCCAGCTAGATAACCCAGC...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCAGCTGGTGTCCACAGTaGCCTGCTGGCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLSWCPQ*PAGSIS
Trigger: GCTGATGCTGCCAGCAGGCCACTGTGGACACCAGCT...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCAGCAGCAGGCATTCCTaGTGGCCAGGCCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFSSRHS*WPGPSC
Trigger: GCAAGATGGGCCTGGCCACCAGGAATGCCTGCTGCT...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTCCCCTGCCACACAGGTGGTAGATaGCAAGGCTGGGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: GWTSVLPRSTLRTQEVPCHTGGR*QGWDLN
Trigger: GTTCAGATCCCAGCCTTGCCATCTACCACCTGTGTG...GCAGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGTGTAGTCACCACTGTTaGAGGTGGGGCCTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGCSHHC*RWGLAG
Trigger: TCCCGCCAGGCCCCACCTCCAACAGTGGTGACTACA...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGGGTGGGAGTGGGCCATaGGCTGGTCAATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQGGSGP*AGQSSG
Trigger: ACCTGATGATTGACCAGCTCATGGCCCACTCCCACC...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGCCAACTCTCCTGGACTaGGTTGCATGCTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LPARAGCPICPASQSCMVPTLLD*VACCLV
Trigger: CACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGG...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGAAAGGGGGTGGCGGGTaGCCGGTACATACTTACCCA +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGKGGGG*PVHTYP
Trigger: TGGGTAAGTATGTACCGGTCACCCGCCACCCCCTTT...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCTGTGGAGGACACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTTGCCACTGGTCTGGTTaGCCCCTCGTTCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: PVEDTGRATPSQVWGGIACHWSG*PLVPSF
Trigger: AAATGAAGGAACGAGGGGGCAACCAGACCAGTGGCA...AGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGTGTCCTCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACATCCCTCGCAGTACACTaGGGACCCAGGAGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTSLAVH*GPRRSP
Trigger: AGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGA...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGGGGGATGGACATCTGTaGTCCCTCGCAGTACACTGC +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGGDGHL*SLAVHC
Trigger: GCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCC...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACACTCATCCATCAGGCCTaGTGCCGCTCTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTLIHQA*CRSPPQ
Trigger: CTGGGGTGGAGAGCGGCAGCAGGCCTGATGGATGAG...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCAGACTGATCTCCATCTaGCCGCAAGGGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFRLISI*PQGLGV
Trigger: GACACCCAGCCCTTGCGGGCAGATGGAGATCAGTCT...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGTTGCATGCTGTCTGGTaGCGTCTTGCCTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPARAGCPICPASQSCMVLHAVW*RLALGL
Trigger: GAGACCCAAGGCAAGACGGCACCAGACAGCATGCAA...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCACCCCAGCGGGGGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCATTGCAAAATGCTATGTaGCCAATGCAGACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PPQRGMDICAPSQYTADPLQNAM*PMQTWH
Trigger: GTGCCAGGTCTGCATTGGGCACATAGCATTTTGCAA...TGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCTGTGGAGGACACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTGTCCAGACTCAGACATaGTTACCTAACGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PVEDTGRATPSQVWGGIAVQTQT*LPNAAA
Trigger: AGCAGCCGCGTTAGGTAACCATGTCTGAGTCTGGAC...AGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGTGTCCTCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTGTCCAGACTCAGACATaGTTACCTAACGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPVQTQT*LPNAAA
Trigger: AGCAGCCGCGTTAGGTAACCATGTCTGAGTCTGGAC...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGGGCCCAGAGAGATTCTaGGGGCCACCAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGGPERF*GPPEPG
Trigger: GCCTGGCTCTGGTGGCCCCCAGAATCTCTCTGGGCC...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGGGTACACAGGCTGTGTaGGTCTCTGCCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGGTQAV*VSAPPS
Trigger: AGAAGGAGGGGCAGAGACCCACACAGCCTGTGTACC...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCCCAGGGCAGCCAGTATGTCCATGGCTTGACTGGAAGCACATGGAATCCACGCCCCATGCCCCGGTTCTaGATCTGGTACACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PQGSQYVHGLTGSTWNPRPMPRF*IWYTGC
Trigger: ACAGCCTGTGTACCAGATCCAGAACCGGGGCATGGG...GCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp CCTGCCTCACCTTACAGGGAAGGGCTTAGAGTCAGGGAAGAGGGGCCTGTTGCTTCGATGCCACTGGTCTaGTTGCCCCCTCGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PASPYREGLRVREEGPVASMPLV*LPPRSF
Trigger: GAAGGAACGAGGGGGCAACCAGACCAGTGGCATCGA...AGCAACAGGCCCCTCTTCCCTGACTCTAAGCCCTTCCCTGTAAGGTGAGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCCCAAGGACTGGAAACTaGGGTGGCCACGATACCCAG +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFPRTGN*GGHDTQ
Trigger: CTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGG...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTGCCATGGACATCACTTaGCTCCGGAGCTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPAMDIT*LRSLLT
Trigger: GGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGC...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGCCTCCCGTGGCTTCATaGGAACGATGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWPPVAS*ERWASP
Trigger: TGGAGAAGCCCATCGTTCTCATGAAGCCACGGGAGG...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGGGAGTGGGCCATaGGCTGGTCAATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWGGSGP*AGQSSG
Trigger: ACCTGATGATTGACCAGCTCATGGCCCACTCCCACC...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGGGTGAGGATCGTGTGTaGCAGCTGTGGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGGEDRV*QLWPGH
Trigger: ATGGCCCGGCCACAGCTGTCACACACGATCCTCACC...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTCCCCTGCTCCTGCAGTGGAGGGTaGGAAGGATACCAATGTATT +
Preference number: 4 (lower is better)
Translates to: GWTSVLPRSTLRTQEVPCSCSGG*EGYQCI
Trigger: AATACATTGGTATCCTTCTCACCCTCCACTGCAGGA...GCAGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGCCCAAGCCACCCGCCTaGAAATGGCGTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRPKPPA*KWRLGA
Trigger: GGCCCCCAGACGCCATTTGCAGGCGGGTGGCTTGGG...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGATCATCAGGTGCATCTaGCGCAGCTTCCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGIIRCI*RSFRGQ
Trigger: CTGTCCTCGGAAGCTGCGGCAGATGCACCTGATGAT...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCTGTGGAGGACACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTGCCCCGGGAAGACATTaGATTGTAACATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PVEDTGRATPSQVWGGIAAPGRH*IVTWTE
Trigger: CTCTGTCCATGTTACAATGCAATGTCTTCCCGGGGC...AGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGTGTCCTCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCCTTGGCTCCGGAGCTTaGTCACCAAGGACTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFLGSGA*SPRTGN
Trigger: GTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAG...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGGAGTCTCGCTCTGTTaGCCAAGCTGGAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ETLGRISRVPHFTHPGILGVSLC*PSWRVQ
Trigger: CTGCACTCTCCAGCTTGGGCAACAGAGCGAGACTCC...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCACTCCTCTGTCAAACTaGCTCAACGAGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLTPLSN*LNEPAP
Trigger: AGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGT...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGCAGATGCCAGCACCATaGTTCTGGTTCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQQMPAP*FWFSLQ
Trigger: CTGCAGGCTGAACCAGAAGCATGGTGCTGGCATCTG...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCAGAAGCCGAGCAGATaGCAGCACCATGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGQKPSR*QHHASG
Trigger: ACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTG...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTCCTCCTTCTCCCCCTTaGGTGGCGCAGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFPPSPP*VAQGLQ
Trigger: CTGCAGCCCCTGCGCCACCCAAGGGGGAGAAGGAGG...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGCCCATGCCCCGGTTCTaGATCTGGTACACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWPMPRF*IWYTGC
Trigger: ACAGCCTGTGTACCAGATCCAGAACCGGGGCATGGG...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCGTCCAGGAAGTCAGGTaGAAGCCCCGGGAAGACATT +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFVQEVR*KPREDI
Trigger: AATGTCTTCCCGGGGCTTCCACCTGACTTCCTGGAC...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGACCAGGTCCTGCTCTTaGTGGGTTTTCACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPARAGCPICPASQSCMVTRSCS*WVFTLC
Trigger: GCAGAGAGTGAAAACCCACCAAGAGCAGGACCTGGT...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCTTGCTCACCAAGGACTaGAAACTGGGGTGGCCACGA +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFLLTKD*KLGWPR
Trigger: TCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAA...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGTCTCCCATCTTTCTCTaGCCGTTGCCCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: ETLGRISRVPHFTHPGILSPIFL*PLPPPP
Trigger: AGGTGGTGGGGGCAACGGCCAGAGAAAGATGGGAGA...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGGAGTTGCATGCTGTCTaGTGCCGTCTTGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGELHAV*CRLALG
Trigger: ACCCAAGGCAAGACGGCACCAGACAGCATGCAACTC...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGTGCTTCACACGCCCCTaGATTTGGCAGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ETLGRISRVPHFTHPGILCFTRP*IWQPGT
Trigger: TGTCCCTGGCTGCCAAATCCAGGGGCGTGTGAAGCA...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCGTGGGACAGGGCCTTTaGACCAAGGTCACCAGATCA +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLVGQGL*TKVTRS
Trigger: TGATCTGGTGACCTTGGTCCAAAGGCCCTGTCCCAC...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGTGCCCAATGCAGACCTaGCACCTGTGGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQCPMQT*HLWMMV
Trigger: CACCATCATCCACAGGTGCCAGGTCTGCATTGGGCA...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGACCAGTTCTTCTCGGTaGGGATCGTGTGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQTSSSR*GSCVTA
Trigger: AGCTGTCACACACGATCCTCACCGAGAAGAACTGGT...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCCACTGTCTGTACGGGTaGGGCATGGTATTTGGATTA +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPHCLYG*GMVFGL
Trigger: TAATCCAAATACCATGCCTCACCCGTACAGACAGTG...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCGCTGTATGGGATGCTTaGAAGCAGGAGGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLAVWDA*KQEETR
Trigger: CCTGGTTTCCTCCTGCTTTCAAGCATCCCATACAGC...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCATGGGGTGCCTCAAATTaGCCCCCTCTGCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPWGASN*PPLQRA
Trigger: AGCTCTTTGCAGAGGGGGTCAATTTGAGGCACCCCA...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAACCAACTTGATGCTGTaGTTCATGCGCTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPTNLML*FMRSGG
Trigger: GCCCCCAGAGCGCATGAAGCACAGCATCAAGTTGGT...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GATCTGGAGAGGAGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTTGCCACTGGTCTGGTTaGCCCCTCGTTCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: DLERRGFTRSCRSKGRPLCHWSG*PLVPSF
Trigger: AAATGAAGGAACGAGGGGGCAACCAGACCAGTGGCA...AAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCTCCTCTCCAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCGCTGGAACCAGGTCCTaGTCTTGGTGGGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLAGTRS*SWWVFT
Trigger: AGTGAAAACCCACCAAGAGCAGGACCTGGTTCCAGC...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTGCTGGAACCAGGTCCTaGTCTTGGTGGGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPAGTRS*SWWVFT
Trigger: AGTGAAAACCCACCAAGAGCAGGACCTGGTTCCAGC...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCTGTCTGGTGCCGTCTTaGCTTGGGTCTCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFCLVPS*LGSPIF
Trigger: AAAGATGGGAGACCCAAGGCAAGACGGCACCAGACA...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGGTGTCCACAGTGGCCTaGTGGCAGCATCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGVSTVA*WQHQPE
Trigger: CTCAGGCTGATGCTGCCAGCAGGCCACTGTGGACAC...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGAGCAGAAGGCCTCCCTaGAGCAGTATATCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQSRRPP*SSISSW
Trigger: CCAGCTAGATATACTGCTGCAGGGAGGCCTTCTGCT...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGAAGCTGATTGAGCGGTaGTCATGTTTCCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPARAGCPICPASQSCMVKLIER*SCFLQW
Trigger: CCACTGCAGGAAACATGAGCACCGCTCAATCAGCTT...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGTTGAGCCCAGGCAGCTaGCAGCACAACATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGLSPGS*QHNMAC
Trigger: GCAGGCCATGTTGTGCTGGCAGCTGCCTGGGCTCAA...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGGGGAAGGTTGTACTCTaGAGGCAGTTTGCGGTCATT +
Preference number: 4 (lower is better)
Translates to: LPARAGCPICPASQSCMVGKVVL*RQFAVI
Trigger: AATGACCGCAAACTGCCTCCAGAGTACAACCTTCCC...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCAAATTGAGTGGGCCATGAGCTaGTCAATCATCAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: ADLRDAPFSLHQGGVPQIEWAMS*SIIRCI
Trigger: GATGCACCTGATGATTGACCAGCTCATGGCCCACTC...AATTTGAGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGTCTAGCTGGAGAGGATaGTCAGGAGGGTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LPARAGCPICPASQSCMVSSWRG*SGGFCR
Trigger: TCTACAGAACCCTCCTGACCATCCTCTCCAGCTAGA...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTCCCCTGCTGTTGTAAGAGCTCGTaGTTTCAAAGTGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GWTSVLPRSTLRTQEVPCCCKSS*FQSVCH
Trigger: GTGGCACACACTTTGAAACCACGAGCTCTTACAACA...GCAGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp AGACTGAGGTCTGTGAACCAGTCCTGGACAACAATCACCACATGGCAGACCGTGAAAGGCAGGCGGGGCTaGCACCTGTGTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RLRSVNQSWTTITTWQTVKGRRG*HLCVQE
Trigger: TTCCTGGACACACAGGTGCCAGCCCCGCCTGCCTTT...CACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTAAGGAACCTGGGATCTaGAGAGGAGGGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPKEPGI*RGGASQ
Trigger: TTGTGAAGCCCCTCCTCTCCAGATCCCAGGTTCCTT...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGGTGTGCGCTCTCCCGTaGCGGGAGTCGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWVCALP*RESGGG
Trigger: GCCCCCACCCGACTCCCGTCACGGGAGAGCGCACAC...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCTGGGGGTTTTCTGCATaGCGGAAGTGCTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFWGFSA*RKCLSL
Trigger: AAGAGACAAGCACTTCCGTCATGCAGAAAACCCCCA...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGTCATCCACCAACTTaGTGCTGTGCTTCATGCGCT +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPGHPPT*CCASCA
Trigger: AGCGCATGAAGCACAGCATCAAGTTGGTGGATGACC...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTCTGACAACAATGACATaGCCATGGACTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPLTTMT*PWTCLS
Trigger: GGACAGGCAAGTCCATGGTCATGTCATTGTTGTCAG...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGCCACATGGCAGACCGTaGAAAGGAAGGCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: ETLGRISRVPHFTHPGILPHGRP*KGRQQS
Trigger: AGATTGCTGCCTTCCTTTTCACGGTCTGCCATGTGG...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGACCAGTTCTTCTCGGTaGGGATCGTGTGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWTSSSR*GSCVTA
Trigger: AGCTGTCACACACGATCCTCACCGAGAAGAACTGGT...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGTGTTGCTCCTGTCCCTaGAAAAGGAGGTCAAGATGG +
Preference number: 4 (lower is better)
Translates to: HRQPGCRADILRPSAALMCCSCP*KRRSRW
Trigger: CCATCTTGACCTCCTTTTTCAGGGACAGGAGCAACA...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCTGGGATGGAAGAAACTaGAGCTCCAACTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFWDGRN*SSNSPG
Trigger: TCCAGGAGAGTTGGAGCTTCAGTTTCTTCCATCCCA...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGGGCTGTGTGGGTCTCTaGCCCTCCTTCTCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRGCVGL*PSFSPL
Trigger: CAAGGGGGAGAAGGAGGGGCAGAGACCCACACAGCC...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp ACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGGTGCGGCAGTGCCCATaGCCCGGTTCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: TVQKATASLTPLSNCLNEVRQCP*PGSGSG
Trigger: ACCAGATCCAGAACCGGGGCATGGGCACTGCCGCAC...CTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCCGGAGCCCGATGAGCTaGTGGACTCGTGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLRSPMS*WTRGWG
Trigger: CCCCCAGCCACGAGTCCAGCAGCTCATCGGGCTCCG...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGTGGTCAATCATCAGGTaGATCTGCCGCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWWSIIR*ICRSFR
Trigger: TCGGAAGCTGCGGCAGATGCACCTGATGATTGACCA...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCCAGGGCTGTATGGGATaGTTGAAAGCAGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFQGCMG*LKAGGN
Trigger: GTTTCCTCCTGCTTTCAAGCATCCCATACAGCCCTG...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCAGCACAACATGGCCTaGTCCAGTGTAGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGQHNMA*SSVEAD
Trigger: ATCAGCTTCTACACTGGAGCAGGCCATGTTGTGCTG...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTGGCTGCAGGGGGTGGTaGGGCGGTGCCCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSGCRGW*GGALRG
Trigger: ACCCCTGAGGGCACCGCCCCACCACCCCCTGCAGCC...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCTTCTCCCCCTTGGGTaGCGCAGGGGCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKLLPLG*RRGCRG
Trigger: CCCCCTGCAGCCCCTGCGCCACCCAAGGGGGAGAAG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp AGTGTGGGGAAGGTTGTACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATGCCACGACAGGGTCCATaGCTGCTGGTGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SVGKVVLWRQFAVIIDEMPRQGP*LLVRQC
Trigger: GCACTGCCGCACCAGCAGCCATGGACCCTGTCGTGG...CATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCCCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGCCACGACAGGGTCCATaGCTGCTGGTGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWPRQGP*LLVRQC
Trigger: GCACTGCCGCACCAGCAGCCATGGACCCTGTCGTGG...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp AGACTGAGGTCTGTGAACCAGTCCTGGACAACAATCACCACATGGCAGACCGTGTCGATGCCACTGGTCTaGTTGCCCCCTCGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RLRSVNQSWTTITTWQTVSMPLV*LPPRSF
Trigger: GAAGGAACGAGGGGGCAACCAGACCAGTGGCATCGA...CACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCTCAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp CCCCAGGGCAGCCAGTATGTCCATGGCTTGACTGGAAGCACATGGAATCCACGCGGGAAGGTTGTACTCTaGAGGCAGTTTGCGGTCATT +
Preference number: 4 (lower is better)
Translates to: PQGSQYVHGLTGSTWNPRGKVVL*RQFAVI
Trigger: AATGACCGCAAACTGCCTCCAGAGTACAACCTTCCC...GCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCACAACAATCACCACATaGCAGACCGTGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPTTITT*QTVKRK
Trigger: CTTCCTTTTCACGGTCTGCCATGTGGTGATTGTTGT...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGAGGTCCTGCTCTTGGTaGGTTTTCACTCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HRQPGCRADILRPSAALMRSCSW*VFTLCF
Trigger: GAAGCAGAGAGTGAAAACCCACCAAGAGCAGGACCT...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCAAATTAGGTCCTGCTCTTGGTaGGTTTTCACTCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ADLRDAPFSLHQGGVPQIRSCSW*VFTLCF
Trigger: GAAGCAGAGAGTGAAAACCCACCAAGAGCAGGACCT...AATTTGAGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCCAGACCTGGCACCTGTaGATGATGGTGGCATTTAAC +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFQTWHL*MMVAFN
Trigger: GTTAAATGCCACCATCATCCACAGGTGCCAGGTCTG...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp CATAGGCAGCCTGGCTGCAGGGCTGACATTCTTAGGCCAAGTGCTGCGCTCATGGTAACTGTCTTTAAGTaGGAGCAGAAGACACGAGGG +
Preference number: 4 (lower is better)
Translates to: HRQPGCRADILRPSAALMVTVFK*EQKTRG
Trigger: CCCTCGTGTCTTCTGCTCTCACTTAAAGACAGTTAC...CATGAGCGCAGCACTTGGCCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGCTCCAGTGTAGAAGCTaGTTGAGCGGTGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: ETLGRISRVPHFTHPGILLQCRS*LSGAHV
Trigger: AACATGAGCACCGCTCAATCAGCTTCTACACTGGAG...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GATCTGGAGAGGAGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCCTAGCAATCAAATaGCTCCTAGCCACAGATGTG +
Preference number: 4 (lower is better)
Translates to: DLERRGFTRSCRSKGRPLLLAIK*LLATDV
Trigger: CACATCTGTGGCTAGGAGTCATTTGATTGCTAGGAG...AAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCTCCTCTCCAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GATCTGGAGAGGAGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTATGATGGGGGTTTTCTaGATGACGGAAGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: DLERRGFTRSCRSKGRPLMMGVF*MTEVLV
Trigger: GACAAGCACTTCCGTCATGCAGAAAACCCCCATCAT...AAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCTCCTCTCCAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCGGCTGTGTGGGTCTCTaGCCCTCCTTCTCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGGCVGL*PSFSPL
Trigger: CAAGGGGGAGAAGGAGGGGCAGAGACCCACACAGCC...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGGTCCATGGCTGCTGGTaGGGCAGTGCCCATGCCCCG +
Preference number: 4 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQVHGCW*GSAHAP
Trigger: CGGGGCATGGGCACTGCCGCACCAGCAGCCATGGAC...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TCAGAACACACATTCTCCAGGGCCCACACTTTTCAGCACTATACTAGAAATCCTGTCCATGGCTGCTGGTaGGGCAGTGCCCATGCCCCG +
Preference number: 4 (lower is better)
Translates to: SEHTFSRAHTFQHYTRNPVHGCW*GSAHAP
Trigger: CGGGGCATGGGCACTGCCGCACCAGCAGCCATGGAC...AGGATTTCTAGTATAGTGCTGAAAAGTGTGGGCCCTGGAGAATGTGTGTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp AGACTGAGGTCTGTGAACCAGTCCTGGACAACAATCACCACATGGCAGACCGTGACCAACTTGATGCTGTaGTTCATGCGCTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RLRSVNQSWTTITTWQTVTNLML*FMRSGG
Trigger: GCCCCCAGAGCGCATGAAGCACAGCATCAAGTTGGT...CACGGTCTGCCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGACCTCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCATCCATCAGGCCTGCTaGCGCTCTCCACCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLIHQAC*RSPPQR
Trigger: CCGCTGGGGTGGAGAGCGGCAGCAGGCCTGATGGAT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAAGACACGAGGGTAGTTaGTGTACTCAGCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTRHEGS*CTQLHQ
Trigger: CTGGTGCAGCTGAGTACAGCAACTACCCTCGTGTCT...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCTGCCTCACCTTACAGGGAAGGGCTTAGAGTCAGGGAAGAGGGGCCTGTTGCTGCTTCTGGTTCAGCCTaGAGAACTCTGAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: PASPYREGLRVREEGPVAASGSA*RTLSQL
Trigger: TAATTGGCTCAGAGTTCTGCAGGCTGAACCAGAAGC...AGCAACAGGCCCCTCTTCCCTGACTCTAAGCCCTTCCCTGTAAGGTGAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAATGCTATGTGCCCAATaGAGACCTGGCACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTMLCAQ*RPGTCG
Trigger: TCCACAGGTGCCAGGTCTGCATTGGGCACATAGCAT...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTCAGGAAACAGCATGTTaGCACATGGGTGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPQETAC*HMGEML
Trigger: AAGCATCTCACCCATGTGGCAACATGCTGTTTCCTG...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAGGGAAGGAGAGAAAATaGGCACTCCCCACTCCGAAA +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTGKERK*ALPTPK
Trigger: TTTCGGAGTGGGGAGTGCCCATTTTCTCTCCTTCCC...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGAACGCGGCTGCTGATTaGTTCTCGGGGCGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWNAAAD*FSGRGV
Trigger: CACACCGCGCCCCGAGAACCAATCAGCAGCCGCGTT...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCTCTCTCTCTTTCCCATaGTGCAATGTAGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFSLSFP*CNVVPL
Trigger: GAGAGGGACTACATTGCACCATGGGAAAGAGAGAGA...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTCTTCTCCCCCTTGGGTaGCGCAGGGGCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSLLPLG*RRGCRG
Trigger: CCCCCTGCAGCCCCTGCGCCACCCAAGGGGGAGAAG...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCCTCCTTCTCCCCCTTaGGTGGCGCAGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKPPSPP*VAQGLQ
Trigger: CTGCAGCCCCTGCGCCACCCAAGGGGGAGAAGGAGG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GGAGTGACTGCATTTCAACGTAAGTGTGGGGAAGGTTGTACTCTGGAGGCAGTTCTGGGGGCAGTAGTTTaGCCTGACCCACGACAGGGT +
Preference number: 4 (lower is better)
Translates to: GVTAFQRKCGEGCTLEAVLGAVV*PDPRQG
Trigger: ACCCTGTCGTGGGTCAGGCCAAACTACTGCCCCCAG...AACTGCCTCCAGAGTACAACCTTCCCCACACTTACGTTGAAATGCAGTCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTTCACACCAATTCATCTaGTCATCCACCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPSHQFI*SSTNLM
Trigger: CATCAAGTTGGTGGATGACCAGATGAATTGGTGTGA...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCCCAACAGGTACTCGATaGCACTGTCACACCAATTCA +
Preference number: 4 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLPTGTR*HCHTNS
Trigger: TGAATTGGTGTGACAGTGCCATCGAGTACCTGTTGG...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGGACTTGCCTGTCCCCTaGAGGCCCAGGACACCAACC +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWDLPVP*RPRTPT
Trigger: GGTTGGTGTCCTGGGCCTCCAGGGGACAGGCAAGTC...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGAAGGTTGTACTCTaGAGGCAGTTTGCGGTCATT +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPGKVVL*RQFAVI
Trigger: AATGACCGCAAACTGCCTCCAGAGTACAACCTTCCC...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGTCTGTGAACCAGTCCTaGACAACAATCACCACATGG +
Preference number: 4 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQSVNQS*TTITTW
Trigger: CCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGA...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAGAGTGGGCCATGAGCTaGTCAATCATCAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTEWAMS*SIIRCI
Trigger: GATGCACCTGATGATTGACCAGCTCATGGCCCACTC...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCCACCCCAGCGGGGGATaGACATCTGTGCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFHPSGG*TSVLPR
Trigger: GCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTG...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCCCAGGGCAGCCAGTATGTCCATGGCTTGACTGGAAGCACATGGAATCCACGCATCCACGCAGGGTTCTaGCTTAATCACATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PQGSQYVHGLTGSTWNPRIHAGF*LNHIPG
Trigger: TCCTGGAATGTGATTAAGCCAGAACCCTGCGTGGAT...GCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR CAA 72 bp TGGAAGAAACTGAAGCTCCAACTCTCCTGGACTGAGTaGCATGCTGTCTGGTGCCGTCTTGCCTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: WKKLKLQLSWTE*HAVWCRLALGL
Trigger: GAGACCCAAGGCAAGACGGCACCAGACAGCATGCAACTCAGTCCAGGAGAGTTGGAGCTTCAGTTTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp ACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCTCCCGTGGCTTCATaGGAACGATGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TVQKATASLTPLSNCLNEPPVAS*ERWASP
Trigger: TGGAGAAGCCCATCGTTCTCATGAAGCCACGGGAGG...CTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGACCAACACATCAGTCTaGTCCAACAGGTACTCGATG +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWTNTSV*SNRYSM
Trigger: CATCGAGTACCTGTTGGATCAGACTGATGTGTTGGT...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGCAGCAATCTGGAGTaGCTGCATTTCAACGTAAGT +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPGSNLE*LHFNVS
Trigger: ACTTACGTTGAAATGCAGTCACTCCAGATTGCTGCC...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGTACCAGGAATAAGTTaGCCTCAGAGTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPVPGIS*PQSPGS
Trigger: ACTTCCTGGACTCTGAGGTCAACTTATTCCTGGTAC...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp ACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGAGGAGGTCCCCTGCATaGCATTCCTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TVQKATASLTPLSNCLNERRSPA*HSSPWP
Trigger: AGGCCAAGGAGAGGAATGTCATGCAGGGGACCTCCT...CTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp ACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGTACACAGGGGAGGCTTaGTGCCACCCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TVQKATASLTPLSNCLNEYTGEA*CHPRKQ
Trigger: CTGTTTCCTGGGGTGGCATCAAGCCTCCCCTGTGTA...CTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAACACCAAGAGTGTGCTaGTTCAGACCTTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTTPRVC*FRPSLA
Trigger: TGCCAAGGAAGGTCTGAATCAGCACACTCTTGGTGT...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGCCTGGCACCTGTGGATaGTGGTGGCATTTAACATTT +
Preference number: 4 (lower is better)
Translates to: ETLGRISRVPHFTHPGILPGTCG*WWHLTF
Trigger: AAATGTTAAATGCCACCATCATCCACAGGTGCCAGG...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGGAGTTTAAAACTGAAAGTCACCCAGCTGGTAAGAACTAACAGACAGGATCAGCTGCTGGTGCGGCAGTaGCCATGCCCCGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GSLKLKVTQLVRTNRQDQLLVRQ*PCPGSG
Trigger: TCCAGAACCGGGGCATGGGCACTGCCGCACCAGCAG...CTGATCCTGTCTGTTAGTTCTTACCAGCTGGGTGACTTTCAGTTTTAAACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCTGCTGGTGCGGCAGTaGCCATGCCCCGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKLLVRQ*PCPGSG
Trigger: TCCAGAACCGGGGCATGGGCACTGCCGCACCAGCAG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTGAGCTCTCCAGACCCTaGCTCACCTTACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFELSRP*LTLQGR
Trigger: CCTTCCCTGTAAGGTGAGGCAGGGTCTGGAGAGCTC...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAGTGTCCAATTTGTCCTaGTTCCCAGAGCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTVSNLS*FPELHG
Trigger: ACCATGCAGCTCTGGGAAGCAGGACAAATTGGACAC...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGGTTGCTGTACTCAGCTaGACCAGTGTATTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGVAVLS*TSVFSH
Trigger: ATGGGAAAATACACTGGTGCAGCTGAGTACAGCAAC...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGTGGACTGGAGCTGACTaGTTTACTGAACGATGGATT +
Preference number: 4 (lower is better)
Translates to: GGGNARPDFQSASFHPSGWTGAD*FTERWI
Trigger: AATCCATCGTTCAGTAAAGCAGTCAGCTCCAGTCCA...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GATCTGGAGAGGAGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCAAATTGACCCCCTCTaGAAAGAGCTCTTACCAGTT +
Preference number: 4 (lower is better)
Translates to: DLERRGFTRSCRSKGRPLQIDPL*KELLPV
Trigger: AACTGGTAAGAGCTCTTTGCAGAGGGGGTCAATTTG...AAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCTCCTCTCCAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGTCTCTCTCTTTCCCATaGTGCAATGTAGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWSLSFP*CNVVPL
Trigger: GAGAGGGACTACATTGCACCATGGGAAAGAGAGAGA...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGCTTCCCCTCCTCCCGTaGCTTCATGAGAACGATGGG +
Preference number: 4 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRLPLLP*LHENDG
Trigger: CCCATCGTTCTCATGAAGCCACGGGAGGAGGGGAAG...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCTTGTGCGGTACACAGGCTGTGTaGGTCTCTGCCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RSLLMRWSRIEGLRMGLCGTQAV*VSAPPS
Trigger: AGAAGGAGGGGCAGAGACCCACACAGCCTGTGTACC...GCACAAGCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCACCAACAGGTACTCGATaGCACTGTCACACCAATTCA +
Preference number: 4 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPPTGTR*HCHTNS
Trigger: TGAATTGGTGTGACAGTGCCATCGAGTACCTGTTGG...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGAGGAAGGCAGCAATCTaGAGTGACTGCATTTCAACG +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWRKAAI*SDCIST
Trigger: CGTTGAAATGCAGTCACTCCAGATTGCTGCCTTCCT...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCAAATTACAACAATCACCACATaGCAGACCGTGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ADLRDAPFSLHQGGVPQITTITT*QTVKRK
Trigger: CTTCCTTTTCACGGTCTGCCATGTGGTGATTGTTGT...AATTTGAGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTGGCCCTGGATCCCCATaGTATGAAACACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFGPGSP*YETPGL
Trigger: CAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCC...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTCACCACTGTTGGAGGTaGGGCCTGGCGGGAGGGACG +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSHHCWR*GLAGGT
Trigger: CGTCCCTCCCGCCAGGCCCCACCTCCAACAGTGGTG...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTGTCCTGCGCATGCGCTaGGGGCTGGAGCTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSVLRMR*GLELEN
Trigger: GTTCTCGAGCTCCAGCCCTCAGCGCATGCGCAGGAC...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAGGCAGCAATCTGGAGTaGCTGCATTTCAACGTAAGT +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTGSNLE*LHFNVS
Trigger: ACTTACGTTGAAATGCAGTCACTCCAGATTGCTGCC...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACACTGCTTCACTGTCCATaGAGGGTACCAGGAATAAGT +
Preference number: 4 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTLLHCP*RVPGIS
Trigger: ACTTATTCCTGGTACCCTTCATGGACAGTGAAGCAG...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGGCCCGGGCTTCCTGGTaGCCATTCAGACTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQARASW*PFRLLP
Trigger: TGGGAGGAGTCTGAATGGTCACCAGGAAGCCCGGGC...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCTGTACTGTATTTAACTaGGCAGATGAGGGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFCTVFN*ADEGWY
Trigger: GTACCAACCCTCATCTGCTCAGTTAAATACAGTACA...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCCCACAAGATCACAGGTaGATCCAATCAACAATCTCA +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFPQDHR*IQSTIS
Trigger: TGAGATTGTTGATTGGATTCACCTGTGATCTTGTGG...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TCAGAACACACATTCTCCAGGGCCCACACTTTTCAGCACTATACTAGAAATCCTGTGCGGCAGTGCCCATaGCCCGGTTCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: SEHTFSRAHTFQHYTRNPVRQCP*PGSGSG
Trigger: ACCAGATCCAGAACCGGGGCATGGGCACTGCCGCAC...AGGATTTCTAGTATAGTGCTGAAAAGTGTGGGCCCTGGAGAATGTGTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp AAAGTCACCCAGCTGGTAAGAACTAACAGACAGGATCAGAACACACATTCTCCAGACAGGGTCCATGGCTaGTGGTGCGGCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: KVTQLVRTNRQDQNTHSPDRVHG*WCGSAH
Trigger: ATGGGCACTGCCGCACCAGCAGCCATGGACCCTGTC...TGGAGAATGTGTGTTCTGATCCTGTCTGTTAGTTCTTACCAGCTGGGTGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTGGGGGTAGTACTCGGTaGCTTCATCGGAGCCCGATG +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTGGSTR*LHRSPM
Trigger: CATCGGGCTCCGATGAAGGCACCGAGTACTACCCCC...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTCGGCGAGCTTTGTTCTaGAAGAAGACTAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFRRALF*KKTRWG
Trigger: CCCCCACCTAGTCTTCTTGCAGAACAAAGCTCGCCG...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTCAGGCGGCTGTACTCTaGCAGAGCAGAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFQAAVL*QSRGLS
Trigger: AGAAAGTCCTCTGCTCTGGCAGAGTACAGCCGCCTG...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTTCAGACTCCTCCCACTaGTTGTCCCTGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFSDSSH*LSLWRT
Trigger: TGTCCTCCACAGGGACAAGCAGTGGGAGGAGTCTGA...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCCAACGAGCCAGCCCCTaGACAAAACCCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLQRASP*TKPWRW
Trigger: CCACCTCCAGGGTTTTGTGCAGGGGCTGGCTCGTTG...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGTTCCTGGTTCCCATCTaGTGCAGGGCCCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRFLVPI*CRALLS
Trigger: AGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAA...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTCTGGGGGCAGTAGTTTaGCCTGACCCACGACAGGGT +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTLGAVV*PDPRQG
Trigger: ACCCTGTCGTGGGTCAGGCCAAACTACTGCCCCCAG...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TCAGAACACACATTCTCCAGGGCCCACACTTTTCAGCACTATACTAGAAATCCTGACTTGCCTGTCCCCTaGAGGCCCAGGACACCAACC +
Preference number: 4 (lower is better)
Translates to: SEHTFSRAHTFQHYTRNPDLPVP*RPRTPT
Trigger: GGTTGGTGTCCTGGGCCTCCAGGGGACAGGCAAGTC...AGGATTTCTAGTATAGTGCTGAAAAGTGTGGGCCCTGGAGAATGTGTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGGGCTGGGGGATGGGGTaGAGGGCTTCACCATCTCTG +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKGWGMG*RASPSL
Trigger: CAGAGATGGTGAAGCCCTCCACCCCATCCCCCAGCC...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCGACTGGAAACTGGGGTaGCCACGATACCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLDWKLG*PRYPGS
Trigger: GCTGCCTGGGTATCGTGGCCACCCCAGTTTCCAGTC...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGCCAAGGACTGGAAACTaGGGTGGCCACGATACCCAG +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWPRTGN*GGHDTQ
Trigger: CTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGG...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCGGCACTGTATTTAACTaGGCATTTAACCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFGTVFN*AFNPKA
Trigger: TGCCTTTGGGTTAAATGCCCAGTTAAATACAGTGCC...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCCAGTCGGTCAGGAAGTaGCTGTGCCAGAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLQSVRK*LCQSLC
Trigger: GCACAGGCTCTGGCACAGCCACTTCCTGACCGACTG...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCTCCACAGTGGCCTGCTaGCAGCATCAGCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLSTVAC*QHQPES
Trigger: GGACTCAGGCTGATGCTGCCAGCAGGCCACTGTGGA...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCAGCAGGCATTCCTGGTaGCCAGGCCCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLSRHSW*PGPSCS
Trigger: GCTGCAAGATGGGCCTGGCCACCAGGAATGCCTGCT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCGCTTGTGCCAGGTCCTaGCCAAGCACTTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGACARS*PSTLPG
Trigger: TCCAGGCAAAGTGCTTGGCCAGGACCTGGCACAAGC...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR TCA 90 bp GGGAGTTTAAAACTGAAAGTCACCCAGCTGGTAAGAACTAACAGACAGGATCAGGGCAGTAGTTTGGCCTaGCCCACGACAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: GSLKLKVTQLVRTNRQDQGSSLA*PTTGSM
Trigger: CATGGACCCTGTCGTGGGTCAGGCCAAACTACTGCC...CTGATCCTGTCTGTTAGTTCTTACCAGCTGGGTGACTTTCAGTTTTAAACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR TCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGGGCAGTAGTTTGGCCTaGCCCACGACAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKGSSLA*PTTGSM
Trigger: CATGGACCCTGTCGTGGGTCAGGCCAAACTACTGCC...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp ACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGGGTCATCCACCAACTTaGTGCTGTGCTTCATGCGCT +
Preference number: 4 (lower is better)
Translates to: TVQKATASLTPLSNCLNEGHPPT*CCASCA
Trigger: AGCGCATGAAGCACAGCATCAAGTTGGTGGATGACC...CTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GGAGGCAGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGGGTCATCCACCAACTTaGTGCTGTGCTTCATGCGCT +
Preference number: 4 (lower is better)
Translates to: GGSLRSLLMRWSRIEGLRGHPPT*CCASCA
Trigger: AGCGCATGAAGCACAGCATCAAGTTGGTGGATGACC...CCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR TCA 90 bp CGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCTTGTGCCCACATGGCAGACCGTaGAAAGGAAGGCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: RSLLMRWSRIEGLRMGLCPHGRP*KGRQQS
Trigger: AGATTGCTGCCTTCCTTTTCACGGTCTGCCATGTGG...GCACAAGCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR TCA 90 bp ACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCTTCTTAGCAGAGACTaGTCTCCATCTGCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: TVQKATASLTPLSNCLNELLSRD*SPSARK
Trigger: CTTGCGGGCAGATGGAGATCAGTCTCTGCTAAGAAG...CTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTCTCTCTTTCCCATGGTaGAATGTAGTCCCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFLSFPW*NVVPLP
Trigger: CGGGAGAGGGACTACATTGCACCATGGGAAAGAGAG...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTGGCTGTGTGGGTCTCTaGCCCTCCTTCTCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSGCVGL*PSFSPL
Trigger: CAAGGGGGAGAAGGAGGGGCAGAGACCCACACAGCC...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGAGTGACTGCATTTCAACGTAAGTGTGGGGAAGGTTGTACTCTGGAGGCAGTTTGCCACTGGTCTGGTTaGCCCCTCGTTCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GVTAFQRKCGEGCTLEAVCHWSG*PLVPSF
Trigger: AAATGAAGGAACGAGGGGGCAACCAGACCAGTGGCA...AACTGCCTCCAGAGTACAACCTTCCCCACACTTACGTTGAAATGCAGTCACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGCGGCGAGCTTTGTTCTaGAAGAAGACTAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWRRALF*KKTRWG
Trigger: CCCCCACCTAGTCTTCTTGCAGAACAAAGCTCGCCG...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCAAAGTGTGTGCCACCTaGCCCCTCTTGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFKVCAT*PLLLLL
Trigger: GAGCAGGAGCAAGAGGGGGCAGGTGGCACACACTTT...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GTATGTCCATGGCTTGACTGGAAGCACATGGAATCCACGCAGGGTTCTGGCTTACCTGGCCAAGCACTTTaGCTGGATTGTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: VCPWLDWKHMESTQGSGLPGQAL*LDCSTE
Trigger: TTCAGTGGAACAATCCAGGCAAAGTGCTTGGCCAGG...TAAGCCAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTGGCTTCACAAGGTCATaGCGATCTAAGGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTGFTRS*RSKGRP
Trigger: GGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCC...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTCTGGTTCCCATCTGCTaGAGGGCCCTGCTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTLVPIC*RALLSV
Trigger: CACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAG...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTCCCCGGTTCTGGATCTaGTACACAGGCTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTPRFWI*YTGCVG
Trigger: ACCCACACAGCCTGTGTACCAGATCCAGAACCGGGG...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCCCCATGCCCCGGTTCTaGATCTGGTACACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLPMPRF*IWYTGC
Trigger: ACAGCCTGTGTACCAGATCCAGAACCGGGGCATGGG...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGAGAAGTCGATGCCACTaGTCTGGTTGCCCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWRSRCH*SGCPLV
Trigger: AACGAGGGGGCAACCAGACCAGTGGCATCGACTTCT...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCAAATTCATTGCATTGTAACATaGACAGAGTTCCCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: ADLRDAPFSLHQGGVPQIHCIVT*TEFPCN
Trigger: GTTACAAGGGAACTCTGTCCATGTTACAATGCAATG...AATTTGAGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGGACACCTCATGTCTCTaGGCCGGGAAGCCACGATCC +
Preference number: 4 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQDTSCL*AGKPRS
Trigger: GGATCGTGGCTTCCCGGCCCAGAGACATGAGGTGTC...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTACAGACTCAGCCAGCTaGACTGGAGCTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFTDSAS*TGADCF
Trigger: AAAGCAGTCAGCTCCAGTCCAGCTGGCTGAGTCTGT...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTACAAAACCCTGGAGGTaGGACAGGGCCTTTGGACCA +
Preference number: 4 (lower is better)
Translates to: ATVFNQQKALSVRVRHGITKPWR*DRAFGP
Trigger: TGGTCCAAAGGCCCTGTCCCACCTCCAGGGTTTTGT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCATGGCTTGACTGGAAGCACATGGAATCCACGCAGGGTTCTGGCTTAATCACATTGACTGGAAGCACATaGAATCCACGCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PWLDWKHMESTQGSGLITLTGST*NPRRVL
Trigger: CAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAA...TGTGATTAAGCCAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAAGCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR CAA 72 bp ACATACTTACCCACTGTTCAGAAGGCTACTGCCAGTTaGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TYLPTVQKATAS*TPLSNCLNEPA
Trigger: GGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGTGGGTAAGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGTGGGGGTTTTCTGCATaGCGGAAGTGCTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRWGFSA*RKCLSL
Trigger: AAGAGACAAGCACTTCCGTCATGCAGAAAACCCCCA...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGGGGCCCTGCTTTCTGTaGTCAGGTCCCTGGAATAAA +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWGPCFL*SGPWNK
Trigger: TTTATTCCAGGGACCTGATCACAGAAAGCAGGGCCC...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGCAGAAGTGTGAAGAATaGGACCCTGATGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRQKCEE*DPDGFL
Trigger: CAGGAAGCCATCAGGGTCTCATTCTTCACACTTCTG...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCACCCAGGAGGTCCCCTaGATGACATTCCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLTQEVP*MTFLSL
Trigger: CAAGGAGAGGAATGTCATGCAGGGGACCTCCTGGGT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCTCTCCTGGACTGAGTTaGATGCTGTCTGGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFSPGLS*MLSGAV
Trigger: GACGGCACCAGACAGCATGCAACTCAGTCCAGGAGA...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGCAAAGTTAGAGGATTaGAAAATGCTATGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ETLGRISRVPHFTHPGILAKLED*KMLCAQ
Trigger: TTGGGCACATAGCATTTTGCAATCCTCTAACTTTGC...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GGGAGTTTAAAACTGAAAGTCACCCAGCTGGTAAGAACTAACAGACAGGATCAGCAGGAAGAGGCTCAATaGAGGATGTGGCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSLKLKVTQLVRTNRQDQQEEAQ*RMWQGG
Trigger: CCCACCCTGCCACATCCTGCATTGAGCCTCTTCCTG...CTGATCCTGTCTGTTAGTTCTTACCAGCTGGGTGACTTTCAGTTTTAAACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTGCCCCTAAGGAAAGCTaGGCCGAAGGAAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTAPKES*AEGRRG
Trigger: TCCTCTTCTTCCTTCGGCCCAGCTTTCCTTAGGGGC...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGGGTACACAGGCTGTGTaGGTCTCTGCCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKGTQAV*VSAPPS
Trigger: AGAAGGAGGGGCAGAGACCCACACAGCCTGTGTACC...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GGGAGTTTAAAACTGAAAGTCACCCAGCTGGTAAGAACTAACAGACAGGATCAGCCCCGGTTCTGGATCTaGTACACAGGCTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GSLKLKVTQLVRTNRQDQPRFWI*YTGCVG
Trigger: ACCCACACAGCCTGTGTACCAGATCCAGAACCGGGG...CTGATCCTGTCTGTTAGTTCTTACCAGCTGGGTGACTTTCAGTTTTAAACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp GTATGTCCATGGCTTGACTGGAAGCACATGGAATCCACGCAGGGTTCTGGCTTACCAACAGGTACTCGATaGCACTGTCACACCAATTCA +
Preference number: 4 (lower is better)
Translates to: VCPWLDWKHMESTQGSGLPTGTR*HCHTNS
Trigger: TGAATTGGTGTGACAGTGCCATCGAGTACCTGTTGG...TAAGCCAGAACCCTGCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTGTCCAGGAAGTCAGGTaGAAGCCCCGGGAAGACATT +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTVQEVR*KPREDI
Trigger: AATGTCTTCCCGGGGCTTCCACCTGACTTCCTGGAC...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCATCTCAGGTTTGGGGTaGGATCGCTCACAGTCACCC +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLISGLG*DRSQSP
Trigger: GGGTGACTGTGAGCGATCCCACCCCAAACCTGAGAT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTGCCCTCTGTAGAGACTaGCATTCTATCCACTTCTGG +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFALCRD*HSIHFW
Trigger: CCAGAAGTGGATAGAATGCCAGTCTCTACAGAGGGC...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGCCCTGCACAAAACCCTaGAGGTGGGACAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQPCTKP*RWDRAF
Trigger: AAAGGCCCTGTCCCACCTCCAGGGTTTTGTGCAGGG...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 72 bp TGCAGACAAAACAGATGCCCAGCAAGCTTTAGCAACTaGTCCAATGCCACACAGGTGGTAGATGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: CRQNRCPASFSN*SNATQVVDGKA
Trigger: AGCCTTGCCATCTACCACCTGTGTGGCATTGGACAAGTTGCTAAAGCTTGCTGGGCATCTGTTTTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 72 bp AGTGACAAGAGACTAAGGGCCAAGAAAAGACACAATTaGCCCCAGGGCAGCCAGTATGTCCATGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: SDKRLRAKKRHN*PQGSQYVHGLT
Trigger: AGTCAAGCCATGGACATACTGGCTGCCCTGGGGCAAATTGTGTCTTTTCTTGGCCCTTAGTCTCTTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR TCA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTCTGACAACAATGACATaGCCATGGACTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ATVFNQQKALSVRVRHGILTTMT*PWTCLS
Trigger: GGACAGGCAAGTCCATGGTCATGTCATTGTTGTCAG...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCCTGACAACAATGACATaGCCATGGACTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGLTTMT*PWTCLS
Trigger: GGACAGGCAAGTCCATGGTCATGTCATTGTTGTCAG...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR TCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCAGGCTACTGCCAGTTTaGCTCCTCTGTCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLRLLPV*LLCQTA
Trigger: GGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp AGTGTGGGGAAGGTTGTACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATGTGTGTAGAAGGCGAATaGGATGGGGGCAAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: SVGKVVLWRQFAVIIDEMCVEGE*DGGKSD
Trigger: GTCACTTTTGCCCCCATCTCATTCGCCTTCTACACA...CATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCCCCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGATCATCAGGTGCATCTaGCGCAGCTTCCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKIIRCI*RSFRGQ
Trigger: CTGTCCTCGGAAGCTGCGGCAGATGCACCTGATGAT...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCTGGTCAATCATCAGGTaGATCTGCCGCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLWSIIR*ICRSFR
Trigger: TCGGAAGCTGCGGCAGATGCACCTGATGATTGACCA...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGGCCCCGGGAAGACATTaGATTGTAACATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWAPGRH*IVTWTE
Trigger: CTCTGTCCATGTTACAATGCAATGTCTTCCCGGGGC...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCTTGGCTCCGGAGCTTaGTCACCAAGGACTGGAAAC +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKLGSGA*SPRTGN
Trigger: GTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGGCCGGATTTCCAGAGTaGCTCATTTCACCCATCCGG +
Preference number: 4 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQAGFPE*LISPIR
Trigger: CCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGC...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGCATAGGCAGCCTGGCTaGAGGGCTGACATTCTTAGG +
Preference number: 4 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQHRQPG*RADILR
Trigger: CCTAAGAATGTCAGCCCTGCAGCCAGGCTGCCTATG...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTGGGAAGGAGAGAAAATaGGCACTCCCCACTCCGAAA +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTGKERK*ALPTPK
Trigger: TTTCGGAGTGGGGAGTGCCCATTTTCTCTCCTTCCC...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTCCCCGGTTCTGGATCTaGTACACAGGCTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSPRFWI*YTGCVG
Trigger: ACCCACACAGCCTGTGTACCAGATCCAGAACCGGGG...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGTCACACCAATTCATCTaGTCATCCACCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGSHQFI*SSTNLM
Trigger: CATCAAGTTGGTGGATGACCAGATGAATTGGTGTGA...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TCAGAACACACATTCTCCAGGGCCCACACTTTTCAGCACTATACTAGAAATCCTAGAAGTCGATGCCACTaGTCTGGTTGCCCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: SEHTFSRAHTFQHYTRNPRSRCH*SGCPLV
Trigger: AACGAGGGGGCAACCAGACCAGTGGCATCGACTTCT...AGGATTTCTAGTATAGTGCTGAAAAGTGTGGGCCCTGGAGAATGTGTGTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp CCCCAGGGCAGCCAGTATGTCCATGGCTTGACTGGAAGCACATGGAATCCACGCAAAACAATCCGTTCTTaGGTAATAAAGAAGTCGATG +
Preference number: 4 (lower is better)
Translates to: PQGSQYVHGLTGSTWNPRKTIRS*VIKKSM
Trigger: CATCGACTTCTTTATTACCCAAGAACGGATTGTTTT...GCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTACCAGGTCCTGCTCTTaGTGGGTTTTCACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTTRSCS*WVFTLC
Trigger: GCAGAGAGTGAAAACCCACCAAGAGCAGGACCTGGT...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGAAAAGGAGGTCAAGATaGAGCCCGGGCTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQKRRSR*SPGFLV
Trigger: CACCAGGAAGCCCGGGCTCCATCTTGACCTCCTTTT...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGAACGATGGATTAATTTaGGGTGGCGAGACCAATTTG +
Preference number: 4 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGNDGLI*GGETNL
Trigger: CAAATTGGTCTCGCCACCCCAAATTAATCCATCGTT...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTAGCAGTATATCTAGCTaGTGTCCACAGTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ATVFNQQKALSVRVRHGISSISS*CPQWPA
Trigger: AGCAGGCCACTGTGGACACCAGCTAGATATACTGCT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCTGTCCATGGCTTGACTaGAAGCACATGGAATCCACG +
Preference number: 4 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGCPWLD*KHMEST
Trigger: CGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACA...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
3UTR CAA 72 bp GGAAGGTTGTACTCTGGAGGCAGTTTGCGGTCATTATaGATGAGATGGTCTAGGATAGAAGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: GRLYSGGSLRSL*MRWSRIEGLRM
Trigger: CATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR TCA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCACCAACACATCAGTCTaGTCCAACAGGTACTCGATG +
Preference number: 4 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGTNTSV*SNRYSM
Trigger: CATCGAGTACCTGTTGGATCAGACTGATGTGTTGGT...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR TCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCCACATGGCAGACCGTaGAAAGGAAGGCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKPHGRP*KGRQQS
Trigger: AGATTGCTGCCTTCCTTTTCACGGTCTGCCATGTGG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGCTTCTCTGGCCCTGCTaGGTGCTTTCTTCACTGACC +
Preference number: 4 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWLLWPC*VLSSLT
Trigger: GGTCAGTGAAGAAAGCACTCAGCAGGGCCAGAGAAG...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGTTGGGGCAGACATTTTaGCAAGGCAGGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQLGQTF*QGREEL
Trigger: CAGCTCTTCCCTGCCTTGTCAAAATGTCTGCCCCAA...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTAGTGTAGAAGCTGATTaGGCGGTGCTCATGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ATVFNQQKALSVRVRHGISVEAD*AVLMFP
Trigger: AGGAAACATGAGCACCGCTCAATCAGCTTCTACACT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGATGTTGCCACATGGGTaGGATGCTTACAAGACAGTA +
Preference number: 4 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRMLPHG*DAYKTV
Trigger: TACTGTCTTGTAAGCATCTCACCCATGTGGCAACAT...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTATGATGGGGGTTTTCTaGATGACGGAAGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ATVFNQQKALSVRVRHGIMMGVF*MTEVLV
Trigger: GACAAGCACTTCCGTCATGCAGAAAACCCCCATCAT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGAAAACAATCCGTTCTTaGGTAATAAAGAAGTCGATG +
Preference number: 4 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWKTIRS*VIKKSM
Trigger: CATCGACTTCTTTATTACCCAAGAACGGATTGTTTT...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp AGTGTGGGGAAGGTTGTACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATGAGGAAGGCAGCAATCTaGAGTGACTGCATTTCAACG +
Preference number: 4 (lower is better)
Translates to: SVGKVVLWRQFAVIIDEMRKAAI*SDCIST
Trigger: CGTTGAAATGCAGTCACTCCAGATTGCTGCCTTCCT...CATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCCCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCTCTGTGAACCAGTCCTaGACAACAATCACCACATGG +
Preference number: 4 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGSVNQS*TTITTW
Trigger: CCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGA...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGTCTGTGAACCAGTCCTaGACAACAATCACCACATGG +
Preference number: 4 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWSVNQS*TTITTW
Trigger: CCATGTGGTGATTGTTGTCCAGGACTGGTTCACAGA...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGGGTGCCGTCTTGCCTTaGGTCTCCCATCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWGAVLP*VSHLSL
Trigger: CAGAGAAAGATGGGAGACCCAAGGCAAGACGGCACC...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCACCAACACATCAGTCTaGTCCAACAGGTACTCGATG +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLTNTSV*SNRYSM
Trigger: CATCGAGTACCTGTTGGATCAGACTGATGTGTTGGT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCGTACCAGGAATAAGTTaGCCTCAGAGTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFVPGIS*PQSPGS
Trigger: ACTTCCTGGACTCTGAGGTCAACTTATTCCTGGTAC...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp CCTAGCAATCAAATGACTCCTAGCCACAGATGTGTGGCCTTGCTATGTAACACTCTGCTTCACTGTCCATaGAGGGTACCAGGAATAAGT +
Preference number: 4 (lower is better)
Translates to: PSNQMTPSHRCVALLCNTLLHCP*RVPGIS
Trigger: ACTTATTCCTGGTACCCTTCATGGACAGTGAAGCAG...AGTGTTACATAGCAAGGCCACACATCTGTGGCTAGGAGTCATTTGATTGCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTTGGATCCCCATGGTATaGAACACCAGGGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSWIPMV*NTRAVW
Trigger: CCATACAGCCCTGGTGTTTCATACCATGGGGATCCA...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR GCA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCTGTTCAGAAGGCTACTaGCAGTTTGACTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PSLATLTTRSQVNPINNLCSEGY*QFDSSV
Trigger: GACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACA...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GGAGGCAGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGTCACACCAATTCATCTaGTCATCCACCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: GGSLRSLLMRWSRIEGLRSHQFI*SSTNLM
Trigger: CATCAAGTTGGTGGATGACCAGATGAATTGGTGTGA...CCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACTGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCAGGAAGGCAGCAATCTaGAGTGACTGCATTTCAACG +
Preference number: 4 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFRKAAI*SDCIST
Trigger: CGTTGAAATGCAGTCACTCCAGATTGCTGCCTTCCT...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCACAACAATCACCACATaGCAGACCGTGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGTTITT*QTVKRK
Trigger: CTTCCTTTTCACGGTCTGCCATGTGGTGATTGTTGT...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp ACTGTTCAGAAGGCTACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGTGCTTTACTGAACGATaGATTAATTTGGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TVQKATASLTPLSNCLNECFTER*INLGWR
Trigger: TCGCCACCCCAAATTAATCCATCGTTCAGTAAAGCA...CTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTTCTGAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GGGAGTTTAAAACTGAAAGTCACCCAGCTGGTAAGAACTAACAGACAGGATCAGGGCAGCAATCTGGAGTaGCTGCATTTCAACGTAAGT +
Preference number: 4 (lower is better)
Translates to: GSLKLKVTQLVRTNRQDQGSNLE*LHFNVS
Trigger: ACTTACGTTGAAATGCAGTCACTCCAGATTGCTGCC...CTGATCCTGTCTGTTAGTTCTTACCAGCTGGGTGACTTTCAGTTTTAAACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR GCA 90 bp AAAGTCACCCAGCTGGTAAGAACTAACAGACAGGATCAGAACACACATTCTCCAAGAAAAGACACAATTTaGCCCAGGGCAGCCAGTATG +
Preference number: 4 (lower is better)
Translates to: KVTQLVRTNRQDQNTHSPRKDTI*PRAASM
Trigger: CATACTGGCTGCCCTGGGGCAAATTGTGTCTTTTCT...TGGAGAATGTGTGTTCTGATCCTGTCTGTTAGTTCTTACCAGCTGGGTGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTCATTGCATTGTAACATaGACAGAGTTCCCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFHCIVT*TEFPCN
Trigger: GTTACAAGGGAACTCTGTCCATGTTACAATGCAATG...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTACTGAGGGTAGGTTCTaGATTTACATTAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFTEGRF*IYIKGE
Trigger: CTCACCTTTAATGTAAATCCAGAACCTACCCTCAGT...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCTGGATTAATTTGGGGTaGCGAGACCAATTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFWINLG*RDQFGD
Trigger: GTCTCCAAATTGGTCTCGCCACCCCAAATTAATCCA...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
3UTR CAA 72 bp ACTGGAGCTGACTGCTTTACTGAACGATGGATTAATTaGGGGTGGCGAGACCAATTTGGAGACATACTTTGG +
Preference number: 4 (lower is better)
Translates to: TGADCFTERWIN*GWRDQFGDILW
Trigger: CCAAAGTATGTCTCCAAATTGGTCTCGCCACCCCAAATTAATCCATCGTTCAGTAAAGCAGTCAGCTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTATGACTGTGTTTATTTaGACCACCAGATCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ATVFNQQKALSVRVRHGIMTVFI*TTRSVP
Trigger: TGGAACAGATCTGGTGGTTCAAATAAACACAGTCAT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCTACATGATGCTGGCTaGTTAGGAGGATTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKLHDAG*LGGFKV
Trigger: GACTTTGAATCCTCCTAATCAGCCAGCATCATGTAG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR GCA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTATCATCACCTTATTTTaGAGACAAAACAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFIITLF*RQNRCP
Trigger: TGGGCATCTGTTTTGTCTGCAAAATAAGGTGATGAT...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp GAGGAAGACCTGGACTCATATGCTGAGAGCTCTGGACAAAGAAGTAATGTAAAGCTAGCCACAGATGTGTaGCCTTGCTATGTAACACTT +
Preference number: 4 (lower is better)
Translates to: EEDLDSYAESSGQRSNVKLATDV*PCYVTL
Trigger: AAGTGTTACATAGCAAGGCCACACATCTGTGGCTAG...CTTTACATTACTTCTTTGTCCAGAGCTCTCAGCATATGAGTCCAGGTCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR TCA 90 bp ATGAGGGTTGGTACTGTACCAAATCGCAGAGTGGATTTAACTGAGGGTAGGTTCAAGAACAGGCTTGCATaGCTGTGTTTATTTGAACCA +
Preference number: 4 (lower is better)
Translates to: MRVGTVPNRRVDLTEGRFKNRLA*LCLFEP
Trigger: TGGTTCAAATAAACACAGTCATGCAAGCCTGTTCTT...GAACCTACCCTCAGTTAAATCCACTCTGCGATTTGGTACAGTACCAACCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGCTAAGCAAGAGTAGATaGGGTTTACGAGAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWLSKSR*GLREES
Trigger: GCTTTCCTCTCGTAAACCTCATCTACTCTTGCTTAG...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR TCA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGATGTATTCCTGTGTCTaGATTGAAAAGCGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWMYSCV*IEKREF
Trigger: GAACTCACGCTTTTCAATTCAGACACAGGAATACAT...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTGATGATCTTAAATGTTaGAATAATGGCCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSDDLKC*NNGQRG
Trigger: CCCTCTCTGGCCATTATTCCAACATTTAAGATCATC...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CCA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTAAAACAATCCGTTCTTaGGTAATAAAGAAGTCGATG +
Preference number: 4 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSKTIRS*VIKKSM
Trigger: CATCGACTTCTTTATTACCCAAGAACGGATTGTTTT...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS GCA 90 bp CTGCCAACCCAGTATCGAATTGACGGTCGCCGGCCCCCTACTCAGTaGCGCACCCCCGCCGGACGTCCCAGCGACCTTTCAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LPTQYRIDGRRPPTQ*RTPAGRPSDLSMAK
Trigger: CTTGGCCATTGAAAGGTCGCTGGGACGTCCGGCGGGGGTGCGGCACTGAGTAGGGGGCCGGCGACCGTCAATTCGATACTGGGTTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596714.1
ENST00000597586.5
CDS GCA 90 bp GTTTGGCCTGACCCACGACAGGGTCCATGGCTGCTGGTGCGGCAGTaGCCATGCCCCGGTTCTGGATCTGGTACACAGGCTGTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: VWPDPRQGPWLLVRQ*PCPGSGSGTQAVWV
Trigger: GACCCACACAGCCTGTGTACCAGATCCAGAACCGGGGCATGGGCACTGCCGCACCAGCAGCCATGGACCCTGTCGTGGGTCAGGCCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
ENST00000602222.5
CDS CCA 90 bp ACAGGGTCCATGGCTGCTGGTGCGGCAGTGCCCATGCCCCGGTTCTaGATCTGGTACACAGGCTGTGTGGGTCTCTGCCCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TGSMAAGAAVPMPRF*IWYTGCVGLCPSFS
Trigger: GGAGAAGGAGGGGCAGAGACCCACACAGCCTGTGTACCAGATCCAGAACCGGGGCATGGGCACTGCCGCACCAGCAGCCATGGACCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
ENST00000602222.5
CDS-3UTR CAA 90 bp GCACCTCCTTCACCACCATCTACCGGATGCTTCACACGCCCCTGGATTTGGCAGCCCTCCTTCTCCCCCTaGGGTGGCGCAGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: APPSPPSTGCFTRPWIWQPSFSP*GGAGAA
Trigger: TGCAGCCCCTGCGCCACCCAAGGGGGAGAAGGAGGG...CTGCCAAATCCAGGGGCGTGTGAAGCATCCGGTAGATGGTGGTGAAGGAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS TCA 90 bp TGGGCCGAAGGAAGAAGAGGAGGAGGATGTAACGCGGGCCCGAGCTaGGATCAGTTCCCTCAGGCGACTCGTCCTGCGCATGCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: WAEGRRGGGCNAGPS*DQFPQATRPAHALR
Trigger: CCTCAGCGCATGCGCAGGACGAGTCGCCTGAGGGAACTGATCTCAGCTCGGGCCCGCGTTACATCCTCCTCCTCTTCTTCCTTCGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270066.11
ENST00000601170.5
CDS-3UTR CAA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCACCCTCCTTCTCCCCCTaGGGTGGCGCAGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPPSFSP*GGAGAA
Trigger: TGCAGCCCCTGCGCCACCCAAGGGGGAGAAGGAGGG...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp CCACCCCAGCGGGGGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCATACCCCATCTCAGGTTaGGGGTGGGATCGCTCACAG +
Preference number: 5 (lower is better)
Translates to: PPQRGMDICAPSQYTADPYPISG*GWDRSQ
Trigger: CTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTA...TGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS GCA 90 bp GTGACAGCTGTGGCCGGGCCATGGACATCACTTGGCTCCGGAGCTTaGTCACCAAGGACTGGAAACTGGGGTGGCCACGATACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: VTAVAGPWTSLGSGA*SPRTGNWGGHDTQA
Trigger: TGCCTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCCCGGCCACAGCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS CCA 90 bp CATCGGAGCCCGATGAGCTGCTGGACTCGTGGCTGGGGGATGGGGTaGAGGGCTTCACCATCTCTGCTGTCTGCAGGAACCTGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: HRSPMSCWTRGWGMG*RASPSLLSAGTCRD
Trigger: GTCTCTACAGGTTCCTGCAGACAGCAGAGATGGTGAAGCCCTCCACCCCATCCCCCAGCCACGAGTCCAGCAGCTCATCGGGCTCCGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270066.11
ENST00000601170.5
CDS-3UTR CAA 90 bp TTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGGTCACCTGCAGCACCTCGCCTCGGCGTCCGGGTaGCAGCCCCTAAGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: FQSASFHPSGHPGHLQHLASASG*QPLRKA
Trigger: AGCTTTCCTTAGGGGCTGCAACCCGGACGCCGAGGC...GAGGTGCTGCAGGTGACCAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp GGTGGTGGAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGGCTCATGACAGGCGCTaGAGCCCAGGCAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GGGNARPDFQSASFHPSGAHDRR*SPGSCQ
Trigger: CTGGCAGCTGCCTGGGCTCAAGCGCCTGTCATGAGC...CCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTCCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS TCA 90 bp CCGGGCAGCGTAGTGGAACCAGTTCTTCTCGGTGAGGATCGTGTGTaGCAGCTGTGGCCGGGCCATGGACATCACTTGGCTCCGGAGCTT +
Preference number: 5 (lower is better)
Translates to: PGSVVEPVLLGEDRV*QLWPGHGHHLAPEL
Trigger: AAGCTCCGGAGCCAAGTGATGTCCATGGCCCGGCCACAGCTGTCACACACGATCCTCACCGAGAAGAACTGGTTCCACTACGCTGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270066.11
ENST00000600097.1
CDS CCA 90 bp TGGACATCACTTGGCTCCGGAGCTTGCTCACCAAGGACTGGAAACTaGGGTGGCCACGATACCCAGGCAGCAGGGAGAAGAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: WTSLGSGACSPRTGN*GGHDTQAAGRRVGW
Trigger: CCAGCCCACTCTTCTCCCTGCTGCCTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS CCA 90 bp CGGGCCATGGACATCACTTGGCTCCGGAGCTTGCTCACCAAGGACTaGAAACTGGGGTGGCCACGATACCCAGGCAGCAGGGAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: RAMDITWLRSLLTKD*KLGWPRYPGSREKS
Trigger: ACTCTTCTCCCTGCTGCCTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS CCA 90 bp GTGAGGATCGTGTGTGACAGCTGTGGCCGGGCCATGGACATCACTTaGCTCCGGAGCTTGCTCACCAAGGACTGGAAACTGGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: VRIVCDSCGRAMDIT*LRSLLTKDWKLGWP
Trigger: TGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCCCGGCCACAGCTGTCACACACGATCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS TCA 90 bp CCGAGGACAGAAGTCCTCTCGGCGAGCTTTGTTCTGCAAGAAGACTaGGGGTGGGAAGAGACGGGCCCTGTCAGGCAGACATCGCTTGGC +
Preference number: 5 (lower is better)
Translates to: PRTEVLSASFVLQED*GWEETGPVRQTSLG
Trigger: GCCAAGCGATGTCTGCCTGACAGGGCCCGTCTCTTCCCACCCTCAGTCTTCTTGCAGAACAAAGCTCGCCGAGAGGACTTCTGTCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS GCA 90 bp TGCCGCAGCTTCCGAGGACAGAAGTCCTCTCGGCGAGCTTTGTTCTaGAAGAAGACTGAGGGTGGGAAGAGACGGGCCCTGTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: CRSFRGQKSSRRALF*KKTEGGKRRALSGR
Trigger: TCTGCCTGACAGGGCCCGTCTCTTCCCACCCTCAGTCTTCTTGCAGAACAAAGCTCGCCGAGAGGACTTCTGTCCTCGGAAGCTGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS-3UTR CAA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCGGCCATGGACATCACTaGGCTCCGGAGCTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFGHGHH*APELAH
Trigger: GTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCC...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGCACACGCCCCTGGATTaGGCAGCCAGGGACACCAAG +
Preference number: 5 (lower is better)
Translates to: ETLGRISRVPHFTHPGILHTPLD*AARDTK
Trigger: CTTGGTGTCCCTGGCTGCCAAATCCAGGGGCGTGTG...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGATGACATTCCTCTCCTaGGCCTCAGGCCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: ETLGRISRVPHFTHPGILMTFLS*ASGQQA
Trigger: CGCCTGCTGGCCTGAGGCCAAGGAGAGGAATGTCAT...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCCTGTCTGGTGCCGTCTaGCCTTGGGTCTCCCATCTT +
Preference number: 5 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFLSGAV*PWVSHL
Trigger: AAGATGGGAGACCCAAGGCAAGACGGCACCAGACAG...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTGTGGGGTGCCTCAAATaGACCCCCTCTGCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPVGCLK*TPSAKS
Trigger: GCTCTTTGCAGAGGGGGTCAATTTGAGGCACCCCAC...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS TCA 90 bp GGGAGGGGGTGGGAAATGACTTGCCTGAGGGGCAGAGCCAGGAGTTaGGCCAGTCCTGACTCTCAGTGTTGTCCTCTTCCTATAGCCCTT +
Preference number: 5 (lower is better)
Translates to: GRGWEMTCLRGRARS*ASPDSQCCPLPIAL
Trigger: AAGGGCTATAGGAAGAGGACAACACTGAGAGTCAGGACTGGCTCAACTCCTGGCTCTGCCCCTCAGGCAAGTCATTTCCCACCCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595700.5
CDS CCA 90 bp TATAGCCCTTGGGGCAGCCAGGGCTCTTCTGAAGCAGAAACTAAGTaGACCACCCACACCCAGCTCTCCAGATCTTGGGAGGATGGGGGT +
Preference number: 5 (lower is better)
Translates to: YSPWGSQGSSEAETK*TTHTQLSRSWEDGG
Trigger: ACCCCCATCCTCCCAAGATCTGGAGAGCTGGGTGTGGGTGGTCCACTTAGTTTCTGCTTCAGAAGAGCCCTGGCTGCCCCAAGGGCTATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595700.5
CDS CCA 90 bp CTTAATCACATTCCAGGAAGAGGCTCAATGCAGGATGTGGCAGGGTaGGGCAAAGGCAGGCGGGGCTGGCACCTGTGTGTCCAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: LNHIPGRGSMQDVAG*GKGRRGWHLCVQEN
Trigger: GTTTTCCTGGACACACAGGTGCCAGCCCCGCCTGCCTTTGCCCCACCCTGCCACATCCTGCATTGAGCCTCTTCCTGGAATGTGATTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CAA 90 bp CCTGTGGAGGACACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTTCCTCCTCTGGAGTGTaGGCTGACAACAATGACATG +
Preference number: 5 (lower is better)
Translates to: PVEDTGRATPSQVWGGIASSSGV*ADNNDM
Trigger: CATGTCATTGTTGTCAGCCAACACTCCAGAGGAGGA...AGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGTGTCCTCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp CCCCAGGGCAGCCAGTATGTCCATGGCTTGACTGGAAGCACATGGAATCCACGCATGCCACTGGTCTGGTaGCCCCCTCGTTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: PQGSQYVHGLTGSTWNPRMPLVW*PPRSFI
Trigger: AATGAAGGAACGAGGGGGCAACCAGACCAGTGGCAT...GCGTGGATTCCATGTGCTTCCAGTCAAGCCATGGACATACTGGCTGCCCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CAA 90 bp CCACCCCAGCGGGGGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCATACTCTGGAGGCAGTTaGCGGTCATTATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: PPQRGMDICAPSQYTADPYSGGS*RSLLMR
Trigger: TCTCATCAATAATGACCGCAAACTGCCTCCAGAGTA...TGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCCCCCGCTGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGGGCTGTATGGGATGCTaGAAAGCAGGAGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: LPARAGCPICPASQSCMVGCMGC*KAGGNQ
Trigger: CTGGTTTCCTCCTGCTTTCAAGCATCCCATACAGCC...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS TCA 90 bp AAGTCCTCTGGTCCTCCTCTGGAGTGTTGGCTGACAACAATGACATaGCCATGGACTTGCCTGTCCCCTGGAGGCCCAGGACACCAACCA +
Preference number: 5 (lower is better)
Translates to: KSSGPPLECWLTTMT*PWTCLSPGGPGHQP
Trigger: TGGTTGGTGTCCTGGGCCTCCAGGGGACAGGCAAGTCCATGGTCATGTCATTGTTGTCAGCCAACACTCCAGAGGAGGACCAGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS TCA 90 bp GTAACATGGACAGAGTTCCCTTGTAACGCAGGTGGGAGTGGGCCATaGGCTGGTCAATCATCAGGTGCATCTGCCGCAGCTTCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: VTWTEFPCNAGGSGP*AGQSSGASAAASED
Trigger: GTCCTCGGAAGCTGCGGCAGATGCACCTGATGATTGACCAGCTCATGGCCCACTCCCACCTGCGTTACAAGGGAACTCTGTCCATGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000594081.1
ENST00000598860.1
ENST00000601170.5
CDS TCA 90 bp CTCTGCAAAGAGCTCTTACCAGTTCTTCTCGGTGAGGATCGTGTGTaGCAGCTGTGGCCGGGCCATGGACATCACTTGGCTCCGGAGCTT +
Preference number: 5 (lower is better)
Translates to: LCKELLPVLLGEDRV*QLWPGHGHHLAPEL
Trigger: AAGCTCCGGAGCCAAGTGATGTCCATGGCCCGGCCACAGCTGTCACACACGATCCTCACCGAGAAGAACTGGTAAGAGCTCTTTGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS CCA 90 bp AGACTGAGGGTGGGAAGAGACGGGCCCTGTCAGGCAGACATCGCTTaGCTTCATGGACTCCCCTTTCTCACCCCAAAGACCTGTTGTTAC +
Preference number: 5 (lower is better)
Translates to: RLRVGRDGPCQADIA*LHGLPFLTPKTCCY
Trigger: GTAACAACAGGTCTTTGGGGTGAGAAAGGGGAGTCCATGAAGCCAAGCGATGTCTGCCTGACAGGGCCCGTCTCTTCCCACCCTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS-3UTR CAA 90 bp TTTCCTGAGGCCTCCCCAGAAGCCGAGCAGATGCCAGCACCATGCTTCTGGTTCTGGTCATCCACCAACTaGATGCTGTGCTTCATGCGC +
Preference number: 5 (lower is better)
Translates to: FPEASPEAEQMPAPCFWFWSSTN*MLCFMR
Trigger: GCGCATGAAGCACAGCATCAAGTTGGTGGATGACCA...GAACCAGAAGCATGGTGCTGGCATCTGCTCGGCTTCTGGGGAGGCCTCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAATGCCACTGGTCTGGTaGCCCCCTCGTTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPMPLVW*PPRSFI
Trigger: AATGAAGGAACGAGGGGGCAACCAGACCAGTGGCAT...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp TGGCTTCCTGGTTCCCATCTGCTGCAGGGCCCTGCTTTCTGTGATCAGGTCCCTAACCAGGTCCTGCTCTaGGTGGGTTTTCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: WLPGSHLLQGPAFCDQVPNQVLL*VGFHSL
Trigger: CAGAGAGTGAAAACCCACCAAGAGCAGGACCTGGTT...AGGGACCTGATCACAGAAAGCAGGGCCCTGCAGCAGATGGGAACCAGGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGACTTGGCTCCGGAGCTaGCTCACCAAGGACTGGAAA +
Preference number: 5 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWTWLRS*LTKDWK
Trigger: TTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGT...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp TGCTGGCTGATTAGGAGGATTCAAAGTCACAGGAAACAGCATGTTGCCACATGGGCCTCGGCGTCCGGGTaGCAGCCCCTAAGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: CWLIRRIQSHRKQHVATWASASG*QPLRKA
Trigger: AGCTTTCCTTAGGGGCTGCAACCCGGACGCCGAGGC...CCATGTGGCAACATGCTGTTTCCTGTGACTTTGAATCCTCCTAATCAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp GGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTTACTCTGGAGGCAGTTaGCGGTCATTATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: GHADLRDAPFSLHQGGVPYSGGS*RSLLMR
Trigger: TCTCATCAATAATGACCGCAAACTGCCTCCAGAGTA...AGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp GAAACGCTAGGCCGGATTTCCAGAGTGCCTCATTTCACCCATCCGGGCATCCTGAACCAGGTCCTGCTCTaGGTGGGTTTTCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: ETLGRISRVPHFTHPGILNQVLL*VGFHSL
Trigger: CAGAGAGTGAAAACCCACCAAGAGCAGGACCTGGTT...CAGGATGCCCGGATGGGTGAAATGAGGCACTCTGGAAATCCGGCCTAGCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp ACAGGACGGGCTACCCCATCTCAGGTTTGGGGTGGGATCGCTCACAGTCACCCCATTCCTGTGTCTGAATaGAAAAGCGTGAGTTCCACC +
Preference number: 5 (lower is better)
Translates to: TGRATPSQVWGGIAHSHPIPVSE*KSVSST
Trigger: GGTGGAACTCACGCTTTTCAATTCAGACACAGGAAT...GGGGTGACTGTGAGCGATCCCACCCCAAACCTGAGATGGGGTAGCCCGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS TCA 90 bp GACTCAGACATGGTTACACGTTATTGGGGCGGCCTCCCCAGTACTTaGCGGGCAGTTTGCAGGCTGTACTTGGATCTCGCAGAGCATAAG +
Preference number: 5 (lower is better)
Translates to: DSDMVTRYWGGLPST*RAVCRLYLDLAEHK
Trigger: CTTATGCTCTGCGAGATCCAAGTACAGCCTGCAAACTGCCCGTCAAGTACTGGGGAGGCCGCCCCAATAACGTGTAACCATGTCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597586.5
CDS TCA 90 bp CAGACTCAGACATGGTTACGTTATTGGGGCGGCCTCCCCAGTACTTaGCGGGCAGTTTGCAGGCTGTACTTGGATCTCGCAGAGCATAAG +
Preference number: 5 (lower is better)
Translates to: QTQTWLRYWGGLPST*RAVCRLYLDLAEHK
Trigger: CTTATGCTCTGCGAGATCCAAGTACAGCCTGCAAACTGCCCGTCAAGTACTGGGGAGGCCGCCCCAATAACGTAACCATGTCTGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596714.1
CDS-3UTR CAA 90 bp TTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGAGCCCCGGGAAGACATaGCATTGTAACATGGACAGA +
Preference number: 5 (lower is better)
Translates to: FTRSCRSKGRPLLSTPGWSPGKT*HCNMDR
Trigger: TCTGTCCATGTTACAATGCAATGTCTTCCCGGGGCT...CCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGGGCCATGGACATCACTaGGCTCCGGAGCTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRGHGHH*APELAH
Trigger: GTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCC...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp CTGCCCGCAAGGGCTGGGTGTCCAATTTGTCCTGCTTCCCAGAGCTGCATGGTGGAACGATGGATTAATTaGGGGTGGCGAGACCAATTT +
Preference number: 5 (lower is better)
Translates to: LPARAGCPICPASQSCMVERWIN*GWRDQF
Trigger: AAATTGGTCTCGCCACCCCAAATTAATCCATCGTTC...CACCATGCAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCCCTTGCGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTGGTGGGACAGGGCCTTaGGACCAAGGTCACCAGATC +
Preference number: 5 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFGGTGP*DQGHQI
Trigger: GATCTGGTGACCTTGGTCCAAAGGCCCTGTCCCACC...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS TCA 90 bp ACTCGATGGCACTGTCACACCAATTCATCTGGTCATCCACCAACTTaGTGCTGTGCTTCATGCGCTCTGGGGGCAGTAGTTTGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: TRWHCHTNSSGHPPT*CCASCALGAVVWPD
Trigger: GTCAGGCCAAACTACTGCCCCCAGAGCGCATGAAGCACAGCATCAAGTTGGTGGATGACCAGATGAATTGGTGTGACAGTGCCATCGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS CCA 90 bp GAAGGGCTCAGGATGGGCTGTGTGTCCAGGAAAACAATCCGTTCTTaGGTAATAAAGAAGTCGATGCCACTGGTCTGGTTGCCCCCTCGT +
Preference number: 5 (lower is better)
Translates to: EGLRMGCVSRKTIRS*VIKKSMPLVWLPPR
Trigger: ACGAGGGGGCAACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGAACGGATTGTTTTCCTGGACACACAGCCCATCCTGAGCCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000601170.5
CDS-3UTR CAA 90 bp GGATGGACATCTGTGCTCCCTCGCAGTACACTGCGGACCCAGGAGGTCCCCTGCAACATAAGAACAGGCTaGCATGACTGTGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: GWTSVLPRSTLRTQEVPCNIRTG*HDCVYL
Trigger: CAAATAAACACAGTCATGCAAGCCTGTTCTTATGTT...GCAGGGGACCTCCTGGGTCCGCAGTGTACTGCGAGGGAGCACAGATGTCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS CCA 90 bp GGGGCGGCCTCCCCAGTACTTGACGGGCAGTTTGCAGGCTGTACTTaGATCTCGCAGAGCATAAGTTTCTCATTTACACGTTATTTCCGT +
Preference number: 5 (lower is better)
Translates to: GAASPVLDGQFAGCT*ISQSISFSFTRYFR
Trigger: ACGGAAATAACGTGTAAATGAGAAACTTATGCTCTGCGAGATCCAAGTACAGCCTGCAAACTGCCCGTCAAGTACTGGGGAGGCCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596714.1
ENST00000597586.5
CDS-3UTR CAA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTGGCTGGGTGTCCAATTaGTCCTGCTTCCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: ATVFNQQKALSVRVRHGIGWVSN*SCFPEL
Trigger: CAGCTCTGGGAAGCAGGACAAATTGGACACCCAGCC...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS CCA 90 bp AAAACAATCCGTTCTTGGGTAATAAAGAAGTCGATGCCACTGGTCTaGTTGCCCCCTCGTTCCTTCATTTCAGCGCTCTGGGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: KTIRSWVIKKSMPLV*LPPRSFISALWARK
Trigger: TTTCCGGGCCCAGAGCGCTGAAATGAAGGAACGAGGGGGCAACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGAACGGATTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS CCA 90 bp ATAACTTCACTTCACTTTAGCACCAGGCTCTGTGTAGGGCAATGCTaGGGACCCAGAAGTGAGTCAGGTCTGATTTCTGCCCCTAGTCTC +
Preference number: 5 (lower is better)
Translates to: ITSLHFSTRLCVGQC*GPRSESGLISAPSL
Trigger: GAGACTAGGGGCAGAAATCAGACCTGACTCACTTCTGGGTCCCCAGCATTGCCCTACACAGAGCCTGGTGCTAAAGTGAAGTGAAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS-3UTR CAA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTACTTGGCTCCGGAGCTaGCTCACCAAGGACTGGAAA +
Preference number: 5 (lower is better)
Translates to: ATVFNQQKALSVRVRHGITWLRS*LTKDWK
Trigger: TTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS CCA 90 bp GGAAGGTTGTACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATaGTCTAGGATAGAAGGGCTCAGGATGGGCTGTGTGTCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: GRLYSGGSLRSLLMR*SRIEGLRMGCVSRK
Trigger: TTTCCTGGACACACAGCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTACAACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000601170.5
CDS-3UTR CAA 90 bp GACAGTAGCAATCATCACTGTTCCAGAAAAGGAACCTGGGATCTGGAGAGGAGGTCCTCCTCTGGAGTGTaGGCTGACAACAATGACATG +
Preference number: 5 (lower is better)
Translates to: DSSNHHCSRKGTWDLERRSSSGV*ADNNDM
Trigger: CATGTCATTGTTGTCAGCCAACACTCCAGAGGAGGA...CCTCCTCTCCAGATCCCAGGTTCCTTTTCTGGAACAGTGATGATTGCTACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp GCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAGGGTGGGGTGCCTCAAATTGAAAACAATCCGTTCTaGGGTAATAAAGAAGTCGAT +
Preference number: 5 (lower is better)
Translates to: ADLRDAPFSLHQGGVPQIENNPF*GNKEVD
Trigger: ATCGACTTCTTTATTACCCAAGAACGGATTGTTTTC...AATTTGAGGCACCCCACCCTGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp AGGGGCTTCACAAGGTCATGCCGATCTAAGGGACGCCCCCTTCTCTCTACACCAAGTTTGCGGTCATTATaGATGAGATGGTCTAGGATA +
Preference number: 5 (lower is better)
Translates to: RGFTRSCRSKGRPLLSTPSLRSL*MRWSRI
Trigger: TATCCTAGACCATCTCATCAATAATGACCGCAAACT...TGGTGTAGAGAGAAGGGGGCGTCCCTTAGATCGGCATGACCTTGTGAAGCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS-3UTR CAA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGGAGAGGGGAGGCTCCTaGCCTACTACAGTCGGTCAG +
Preference number: 5 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWERGGS*PTTVGQ
Trigger: CTGACCGACTGTAGTAGGCAAGGAGCCTCCCCTCTC...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp CCTTCCTTGGCAACACTGACCACAAGATCACAGGTGAATCCAATCAACAATCTCATCTTTCTCTGGCCGTaGCCCCCACCACCTTTCCTA +
Preference number: 5 (lower is better)
Translates to: PSLATLTTRSQVNPINNLIFLWP*PPPPFL
Trigger: TAGGAAAGGTGGTGGGGGCAACGGCCAGAGAAAGAT...GAGATTGTTGATTGGATTCACCTGTGATCTTGTGGTCAGTGTTGCCAAGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS GCA 90 bp TATATAACTTCACTTCACTTTAGCACCAGGCTCTGTGTAGGGCAATaGTGGGGACCCAGAAGTGAGTCAGGTCTGATTTCTGCCCCTAGT +
Preference number: 5 (lower is better)
Translates to: YITSLHFSTRLCVGQ*WGPRSESGLISAPS
Trigger: ACTAGGGGCAGAAATCAGACCTGACTCACTTCTGGGTCCCCAGCATTGCCCTACACAGAGCCTGGTGCTAAAGTGAAGTGAAGTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS-3UTR CAA 90 bp GTAGTTGCTGTACTCAGCTGCACCAGTGTATTTTCCCATCCAAAACATACACAGATGCCACTGGTCTGGTaGCCCCCTCGTTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: VVAVLSCTSVFSHPKHTQMPLVW*PPRSFI
Trigger: AATGAAGGAACGAGGGGGCAACCAGACCAGTGGCAT...CTGTGTATGTTTTGGATGGGAAAATACACTGGTGCAGCTGAGTACAGCAACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp GCCACTGTATTTAACCAACAGAAGGCACTGTCTGTACGGGTGAGGCATGGTATTAAGGCTACTGCCAGTTaGACTCCTCTGTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: ATVFNQQKALSVRVRHGIKATAS*TPLSNC
Trigger: GCAGTTTGACAGAGGAGTCAAACTGGCAGTAGCCTT...AATACCATGCCTCACCCGTACAGACAGTGCCTTCTGTTGGTTAAATACAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp TACTGCCAGTTTGACTCCTCTGTCAAACTGCCTCAACGAGCCAGCCCCTGCACAGAAAACAATCCGTTCTaGGGTAATAAAGAAGTCGAT +
Preference number: 5 (lower is better)
Translates to: YCQFDSSVKLPQRASPCTENNPF*GNKEVD
Trigger: ATCGACTTCTTTATTACCCAAGAACGGATTGTTTTC...TGTGCAGGGGCTGGCTCGTTGAGGCAGTTTGACAGAGGAGTCAAACTGGCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp TGTTTCTCACAAGGCCCTGGATCCCCATGGTATGAAACACCAGGGCTGTATGGGAATCATCACCTTATTTaGCAGACAAAACAGATGCCC +
Preference number: 5 (lower is better)
Translates to: CFSQGPGSPWYETPGLYGNHHLI*QTKQMP
Trigger: GGGCATCTGTTTTGTCTGCAAAATAAGGTGATGATT...CCCATACAGCCCTGGTGTTTCATACCATGGGGATCCAGGGCCTTGTGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp AAAGTCACCCAGCTGGTAAGAACTAACAGACAGGATCAGAACACACATTCTCCATCCTCCTCTGGAGTGTaGGCTGACAACAATGACATG +
Preference number: 5 (lower is better)
Translates to: KVTQLVRTNRQDQNTHSPSSSGV*ADNNDM
Trigger: CATGTCATTGTTGTCAGCCAACACTCCAGAGGAGGA...TGGAGAATGTGTGTTCTGATCCTGTCTGTTAGTTCTTACCAGCTGGGTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CAA 90 bp AGTTTGCGGTCATTATTGATGAGATGGTCTAGGATAGAAGGGCTCAGGATGGGCTACTCTGGAGGCAGTTaGCGGTCATTATTGATGAGA +
Preference number: 5 (lower is better)
Translates to: SLRSLLMRWSRIEGLRMGYSGGS*RSLLMR
Trigger: TCTCATCAATAATGACCGCAAACTGCCTCCAGAGTA...GCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CAA 90 bp CAAAATGCTATGTGCCCAATGCAGACCTGGCACCTGTGGATGATGGTGGCATTTAGTTTGCGGTCATTATaGATGAGATGGTCTAGGATA +
Preference number: 5 (lower is better)
Translates to: QNAMCPMQTWHLWMMVAFSLRSL*MRWSRI
Trigger: TATCCTAGACCATCTCATCAATAATGACCGCAAACT...AAATGCCACCATCATCCACAGGTGCCAGGTCTGCATTGGGCACATAGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp TATGGTTTGGATCTGTGTCCCCACCAGATCTCATGTCAACTTGTAGTTTGTAGTAGCCCCGGGAAGACATaGCATTGTAACATGGACAGA +
Preference number: 5 (lower is better)
Translates to: YGLDLCPHQISCQLVVCSSPGKT*HCNMDR
Trigger: TCTGTCCATGTTACAATGCAATGTCTTCCCGGGGCT...ACTACAAACTACAAGTTGACATGAGATCTGGTGGGGACACAGATCCAAACCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS-3UTR CAA 90 bp TCAGAACACACATTCTCCAGGGCCCACACTTTTCAGCACTATACTAGAAATCCTAAGAAAAGACACAATTaGCCCCAGGGCAGCCAGTAT +
Preference number: 5 (lower is better)
Translates to: SEHTFSRAHTFQHYTRNPKKRHN*PQGSQY
Trigger: ATACTGGCTGCCCTGGGGCAAATTGTGTCTTTTCTT...AGGATTTCTAGTATAGTGCTGAAAAGTGTGGGCCCTGGAGAATGTGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CAA 90 bp CACACATTCTCCAGGGCCCACACTTTTCAGCACTATACTAGAAATCCTTTAGGCAGTTTGCGGTCATTATaGATGAGATGGTCTAGGATA +
Preference number: 5 (lower is better)
Translates to: HTFSRAHTFQHYTRNPLGSLRSL*MRWSRI
Trigger: TATCCTAGACCATCTCATCAATAATGACCGCAAACT...GCCTAAAGGATTTCTAGTATAGTGCTGAAAAGTGTGGGCCCTGGAGAATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CAA 90 bp CACACATTCTCCAGGGCCCACACTTTTCAGCACTATACTAGAAATCCTTTAGGCGAAAACAATCCGTTCTaGGGTAATAAAGAAGTCGAT +
Preference number: 5 (lower is better)
Translates to: HTFSRAHTFQHYTRNPLGENNPF*GNKEVD
Trigger: ATCGACTTCTTTATTACCCAAGAACGGATTGTTTTC...GCCTAAAGGATTTCTAGTATAGTGCTGAAAAGTGTGGGCCCTGGAGAATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS-3UTR CAA 90 bp TGGCATTTAACATTTATTGAGGCTCAGCATAGGTCAGGCACTGATATGGTTTGGATTTGGAGACATACTTaGGGAAACCTCAAACTAAGA +
Preference number: 5 (lower is better)
Translates to: WHLTFIEAQHRSGTDMVWIWRHT*GNLKLR
Trigger: TCTTAGTTTGAGGTTTCCCAAAGTATGTCTCCAAAT...CCAAACCATATCAGTGCCTGACCTATGCTGAGCCTCAATAAATGTTAAATGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270066.11
CDS GCA 72 bp CAGTATCGAATTGACGGTCGCCGGCCCCCTACTCAGTaGCGCACCCCCGCCGGACGTCCCAGCGACCTTTCA +
Preference number: 6 (lower is better)
Translates to: QYRIDGRRPPTQ*RTPAGRPSDLS
Trigger: TGAAAGGTCGCTGGGACGTCCGGCGGGGGTGCGGCACTGAGTAGGGGGCCGGCGACCGTCAATTCGATACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596714.1
ENST00000597586.5
CDS GCA 72 bp GACCCACGACAGGGTCCATGGCTGCTGGTGCGGCAGTaGCCATGCCCCGGTTCTGGATCTGGTACACAGGCT +
Preference number: 6 (lower is better)
Translates to: DPRQGPWLLVRQ*PCPGSGSGTQA
Trigger: AGCCTGTGTACCAGATCCAGAACCGGGGCATGGGCACTGCCGCACCAGCAGCCATGGACCCTGTCGTGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
ENST00000602222.5
CDS CCA 72 bp ATGGCTGCTGGTGCGGCAGTGCCCATGCCCCGGTTCTaGATCTGGTACACAGGCTGTGTGGGTCTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: MAAGAAVPMPRF*IWYTGCVGLCP
Trigger: GGGGCAGAGACCCACACAGCCTGTGTACCAGATCCAGAACCGGGGCATGGGCACTGCCGCACCAGCAGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
ENST00000602222.5
CDS CAA 72 bp GCACTCCCCACTCCGAAACCGGCCTCGGCGTCCGGGTaGCAGCCCCTAAGGAAAGCTGGGCCGAAGGAAGAA +
Preference number: 6 (lower is better)
Translates to: ALPTPKPASASG*QPLRKAGPKEE
Trigger: TTCTTCCTTCGGCCCAGCTTTCCTTAGGGGCTGCAACCCGGACGCCGAGGCCGGTTTCGGAGTGGGGAGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000598886.1
ENST00000601170.5
CDS CCA 72 bp CCGATGAGCTGCTGGACTCGTGGCTGGGGGATGGGGTaGAGGGCTTCACCATCTCTGCTGTCTGCAGGAACC +
Preference number: 6 (lower is better)
Translates to: PMSCWTRGWGMG*RASPSLLSAGT
Trigger: GGTTCCTGCAGACAGCAGAGATGGTGAAGCCCTCCACCCCATCCCCCAGCCACGAGTCCAGCAGCTCATCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000598860.1
ENST00000601170.5
CDS CCA 72 bp GTGCCTTCATCGGAGCCCGATGAGCTGCTGGACTCGTaGCTGGGGGATGGGGTGGAGGGCTTCACCATCTCT +
Preference number: 6 (lower is better)
Translates to: VPSSEPDELLDS*LGDGVEGFTIS
Trigger: AGAGATGGTGAAGCCCTCCACCCCATCCCCCAGCCACGAGTCCAGCAGCTCATCGGGCTCCGATGAAGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000598860.1
ENST00000601170.5
CDS CAA 90 bp TGTGACAGCTGTGGCCGGGCCATGGACATCACTTGGCTCCGGAGCTaGCTCACCAAGGACTGGAAACTGGGGTGGCCACGATACCCAGGC +
Preference number: 6 (lower is better)
Translates to: CDSCGRAMDITWLRS*LTKDWKLGWPRYPG
Trigger: GCCTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCCCGGCCACAGCTGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS GCA 72 bp CCCGAGCTGAGATCAGTTCCCTCAGGCGACTCGTCCTaGGCATGCGCTGAGGGCTGGAGCTCGAGAACTGAA +
Preference number: 6 (lower is better)
Translates to: PELRSVPSGDSS*ACAEGWSSRTE
Trigger: TTCAGTTCTCGAGCTCCAGCCCTCAGCGCATGCGCAGGACGAGTCGCCTGAGGGAACTGATCTCAGCTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270066.11
ENST00000601170.5
CDS GCA 72 bp GTGGCCGGGCCATGGACATCACTTGGCTCCGGAGCTTaGTCACCAAGGACTGGAAACTGGGGTGGCCACGAT +
Preference number: 6 (lower is better)
Translates to: VAGPWTSLGSGA*SPRTGNWGGHD
Trigger: ATCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCCCGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS CCA 72 bp CAGACTCAGACATGGTTACCTAACGCGGCTGCTGATTaGTTCTCGGGGCGCGGTGTGCGCTCTCCCGTGACG +
Preference number: 6 (lower is better)
Translates to: QTQTWLPNAAAD*FSGRGVRSPVT
Trigger: CGTCACGGGAGAGCGCACACCGCGCCCCGAGAACCAATCAGCAGCCGCGTTAGGTAACCATGTCTGAGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000598886.1
ENST00000601170.5
CDS CCA 72 bp CTCCGGAGCTTGCTCACCAAGGACTGGAAACTGGGGTaGCCACGATACCCAGGCAGCAGGGAGAAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: LRSLLTKDWKLG*PRYPGSREKSG
Trigger: CCCACTCTTCTCCCTGCTGCCTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS CAA 72 bp TGTGGCCGGGCCATGGACATCACTTGGCTCCGGAGCTaGCTCACCAAGGACTGGAAACTGGGGTGGCCACGA +
Preference number: 6 (lower is better)
Translates to: CGRAMDITWLRS*LTKDWKLGWPR
Trigger: TCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCCCGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS TCA 72 bp GGAAGAAGAGGAGGAGGATGTAACGCGGGCCCGAGCTaGGATCAGTTCCCTCAGGCGACTCGTCCTGCGCAT +
Preference number: 6 (lower is better)
Translates to: GRRGGGCNAGPS*DQFPQATRPAH
Trigger: ATGCGCAGGACGAGTCGCCTGAGGGAACTGATCTCAGCTCGGGCCCGCGTTACATCCTCCTCCTCTTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270066.11
ENST00000601170.5
CDS GCA 72 bp CTCTCCTTGGCCTCAGGCCAGCAGGCGGCTGTACTCTaGCAGAGCAGAGGACTTTCTCACCCCATCCCAGAT +
Preference number: 6 (lower is better)
Translates to: LSLASGQQAAVL*QSRGLSHPIPD
Trigger: ATCTGGGATGGGGTGAGAAAGTCCTCTGCTCTGGCAGAGTACAGCCGCCTGCTGGCCTGAGGCCAAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270066.11
ENST00000600097.1
CDS CCA 72 bp CTTGGCTCCGGAGCTTGCTCACCAAGGACTGGAAACTaGGGTGGCCACGATACCCAGGCAGCAGGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LGSGACSPRTGN*GGHDTQAAGRR
Trigger: TCTTCTCCCTGCTGCCTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS CCA 72 bp GACATCACTTGGCTCCGGAGCTTGCTCACCAAGGACTaGAAACTGGGGTGGCCACGATACCCAGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: DITWLRSLLTKD*KLGWPRYPGSR
Trigger: CCTGCTGCCTGGGTATCGTGGCCACCCCAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS CCA 72 bp GGGAGAAGAGTGGGCTGGAACCAGGTCCTGGAAAGTTaGGGCAGGGAGGGTAAGAGGGATAGACTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: GRRVGWNQVLES*GREGKRDRLPG
Trigger: CCCTGGCAGTCTATCCCTCTTACCCTCCCTGCCCCAACTTTCCAGGACCTGGTTCCAGCCCACTCTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600097.1
CDS TCA 72 bp CCCCCTCTGCAAAGAGCTCTTACCAGTTCTTCTCGGTaGGGATCGTGTGTGACAGCTGTGGCCGGGCCATGG +
Preference number: 6 (lower is better)
Translates to: PPLQRALTSSSR*GSCVTAVAGPW
Trigger: CCATGGCCCGGCCACAGCTGTCACACACGATCCTCACCGAGAAGAACTGGTAAGAGCTCTTTGCAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS GCA 72 bp CATTTACACGTTATTTCCGTCCCCCGCCCCCATTCCTaGCAACCCAGTATCGAATTGACGGTCGCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: HLHVISVPRPHS*QPSIELTVAGP
Trigger: GGGGCCGGCGACCGTCAATTCGATACTGGGTTGGCAGGAATGGGGGCGGGGGACGGAAATAACGTGTAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596714.1
ENST00000597586.5
CDS CCA 72 bp GTGTGTGACAGCTGTGGCCGGGCCATGGACATCACTTaGCTCCGGAGCTTGCTCACCAAGGACTGGAAACTG +
Preference number: 6 (lower is better)
Translates to: VCDSCGRAMDIT*LRSLLTKDWKL
Trigger: CAGTTTCCAGTCCTTGGTGAGCAAGCTCCGGAGCCAAGTGATGTCCATGGCCCGGCCACAGCTGTCACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000600097.1
ENST00000601170.5
CDS TCA 72 bp GAAGTCCTCTCGGCGAGCTTTGTTCTGCAAGAAGACTaGGGGTGGGAAGAGACGGGCCCTGTCAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: EVLSASFVLQED*GWEETGPVRQT
Trigger: TGTCTGCCTGACAGGGCCCGTCTCTTCCCACCCTCAGTCTTCTTGCAGAACAAAGCTCGCCGAGAGGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS CCA 72 bp TGGGGCAGCCAGGGCTCTTCTGAAGCAGAAACTAAGTaGACCACCCACACCCAGCTCTCCAGATCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: WGSQGSSEAETK*TTHTQLSRSWE
Trigger: CTCCCAAGATCTGGAGAGCTGGGTGTGGGTGGTCCACTTAGTTTCTGCTTCAGAAGAGCCCTGGCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595700.5
CDS TCA 72 bp TTGCCTGAGGGGCAGAGCCAGGAGTTGAGCCAGTCCTaGCTCTCAGTGTTGTCCTCTTCCTATAGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: LPEGQSQELSQS*LSVLSSSYSPW
Trigger: CCAAGGGCTATAGGAAGAGGACAACACTGAGAGTCAGGACTGGCTCAACTCCTGGCTCTGCCCCTCAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595700.5
CDS GCA 72 bp TGTTCTGCAAGAAGACTAGGTGGGGGTAGTACTCGGTaGCTTCATCGGAGCCCGATGAGCTGCTGGACTCGT +
Preference number: 6 (lower is better)
Translates to: CSARRLGGGSTR*LHRSPMSCWTR
Trigger: ACGAGTCCAGCAGCTCATCGGGCTCCGATGAAGGCACCGAGTACTACCCCCACCTAGTCTTCTTGCAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000598860.1
ENST00000601170.5
CDS CAA 90 bp TCCTCCTCTGGAGTGTTGGCTGACAACAATGACATGACCATGGACTaGCCTGTCCCCTGGAGGCCCAGGACACCAACCACCAACACATCA +
Preference number: 6 (lower is better)
Translates to: SSSGVLADNNDMTMD*PVPWRPRTPTTNTS
Trigger: TGATGTGTTGGTGGTTGGTGTCCTGGGCCTCCAGGGGACAGGCAAGTCCATGGTCATGTCATTGTTGTCAGCCAACACTCCAGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS CAA 90 bp AAGACTGAGGGTGGGAAGAGACGGGCCCTGTCAGGCAGACATCGCTaGGCTTCATGGACTCCCCTTTCTCACCCCAAAGACCTGTTGTTA +
Preference number: 6 (lower is better)
Translates to: KTEGGKRRALSGRHR*ASWTPLSHPKDLLL
Trigger: TAACAACAGGTCTTTGGGGTGAGAAAGGGGAGTCCATGAAGCCAAGCGATGTCTGCCTGACAGGGCCCGTCTCTTCCCACCCTCAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS TCA 72 bp ATGGTTACACGTTATTGGGGCGGCCTCCCCAGTACTTaGCGGGCAGTTTGCAGGCTGTACTTGGATCTCGCA +
Preference number: 6 (lower is better)
Translates to: MVTRYWGGLPST*RAVCRLYLDLA
Trigger: TGCGAGATCCAAGTACAGCCTGCAAACTGCCCGTCAAGTACTGGGGAGGCCGCCCCAATAACGTGTAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597586.5
CDS TCA 72 bp TGGGAAATGACTTGCCTGAGGGGCAGAGCCAGGAGTTaGGCCAGTCCTGACTCTCAGTGTTGTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: WEMTCLRGRARS*ASPDSQCCPLP
Trigger: AGGAAGAGGACAACACTGAGAGTCAGGACTGGCTCAACTCCTGGCTCTGCCCCTCAGGCAAGTCATTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595700.5
CDS TCA 72 bp ACATGGTTACGTTATTGGGGCGGCCTCCCCAGTACTTaGCGGGCAGTTTGCAGGCTGTACTTGGATCTCGCA +
Preference number: 6 (lower is better)
Translates to: TWLRYWGGLPST*RAVCRLYLDLA
Trigger: TGCGAGATCCAAGTACAGCCTGCAAACTGCCCGTCAAGTACTGGGGAGGCCGCCCCAATAACGTAACCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596714.1
CDS CCA 72 bp GACAACAATGACATGACCATGGACTTGCCTGTCCCCTaGAGGCCCAGGACACCAACCACCAACACATCAGTC +
Preference number: 6 (lower is better)
Translates to: DNNDMTMDLPVP*RPRTPTTNTSV
Trigger: GACTGATGTGTTGGTGGTTGGTGTCCTGGGCCTCCAGGGGACAGGCAAGTCCATGGTCATGTCATTGTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS GCA 72 bp CTACACCAGGGTGGGGTGCCTCAAATTGACCCCCTCTaGAAAGAGCTCTTACCAGTTCTTCTCGGTGAGGAT +
Preference number: 6 (lower is better)
Translates to: LHQGGVPQIDPL*KELLPVLLGED
Trigger: ATCCTCACCGAGAAGAACTGGTAAGAGCTCTTTGCAGAGGGGGTCAATTTGAGGCACCCCACCCTGGTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601170.5
CDS CCA 72 bp CTTCACTTTAGCACCAGGCTCTGTGTAGGGCAATGCTaGGGACCCAGAAGTGAGTCAGGTCTGATTTCTGCC +
Preference number: 6 (lower is better)
Translates to: LHFSTRLCVGQC*GPRSESGLISA
Trigger: GGCAGAAATCAGACCTGACTCACTTCTGGGTCCCCAGCATTGCCCTACACAGAGCCTGGTGCTAAAGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS CAA 72 bp TCTTGGGTAATAAAGAAGTCGATGCCACTGGTCTGGTaGCCCCCTCGTTCCTTCATTTCAGCGCTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SWVIKKSMPLVW*PPRSFISALWA
Trigger: GGCCCAGAGCGCTGAAATGAAGGAACGAGGGGGCAACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS CAA 90 bp AGAAGGGCTCAGGATGGGCTGTGTGTCCAGGAAAACAATCCGTTCTaGGGTAATAAAGAAGTCGATGCCACTGGTCTGGTTGCCCCCTCG +
Preference number: 6 (lower is better)
Translates to: RRAQDGLCVQENNPF*GNKEVDATGLVAPS
Trigger: CGAGGGGGCAACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGAACGGATTGTTTTCCTGGACACACAGCCCATCCTGAGCCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000601170.5
CDS CAA 72 bp GCACTGTCACACCAATTCATCTGGTCATCCACCAACTaGATGCTGTGCTTCATGCGCTCTGGGGGCAGTAGT +
Preference number: 6 (lower is better)
Translates to: ALSHQFIWSSTN*MLCFMRSGGSS
Trigger: ACTACTGCCCCCAGAGCGCATGAAGCACAGCATCAAGTTGGTGGATGACCAGATGAATTGGTGTGACAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS CAA 90 bp ACAATCCGTTCTTGGGTAATAAAGAAGTCGATGCCACTGGTCTGGTaGCCCCCTCGTTCCTTCATTTCAGCGCTCTGGGCCCGGAAAACA +
Preference number: 6 (lower is better)
Translates to: TIRSWVIKKSMPLVW*PPRSFISALWARKT
Trigger: TGTTTTCCGGGCCCAGAGCGCTGAAATGAAGGAACGAGGGGGCAACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGAACGGATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS TCA 72 bp CACTGTCACACCAATTCATCTGGTCATCCACCAACTTaGTGCTGTGCTTCATGCGCTCTGGGGGCAGTAGTT +
Preference number: 6 (lower is better)
Translates to: HCHTNSSGHPPT*CCASCALGAVV
Trigger: AACTACTGCCCCCAGAGCGCATGAAGCACAGCATCAAGTTGGTGGATGACCAGATGAATTGGTGTGACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS GCA 72 bp AGTCCAGGAAGTCAGGTGGAAGCCCCGGGAAGACATTaGATTGTAACATGGACAGAGTTCCCTTGTAACGCA +
Preference number: 6 (lower is better)
Translates to: SPGSQVEAPGRH*IVTWTEFPCNA
Trigger: TGCGTTACAAGGGAACTCTGTCCATGTTACAATGCAATGTCTTCCCGGGGCTTCCACCTGACTTCCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000594081.1
ENST00000601170.5
CDS GCA 72 bp TCACTTCACTTTAGCACCAGGCTCTGTGTAGGGCAATaGTGGGGACCCAGAAGTGAGTCAGGTCTGATTTCT +
Preference number: 6 (lower is better)
Translates to: SLHFSTRLCVGQ*WGPRSESGLIS
Trigger: AGAAATCAGACCTGACTCACTTCTGGGTCCCCAGCATTGCCCTACACAGAGCCTGGTGCTAAAGTGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594081.1
CDS CCA 72 bp AACAGGTACTCGATGGCACTGTCACACCAATTCATCTaGTCATCCACCAACTTGATGCTGTGCTTCATGCGC +
Preference number: 6 (lower is better)
Translates to: NRYSMALSHQFI*SSTNLMLCFMR
Trigger: GCGCATGAAGCACAGCATCAAGTTGGTGGATGACCAGATGAATTGGTGTGACAGTGCCATCGAGTACCTGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000597598.1
ENST00000601170.5
CDS CCA 72 bp TACTCTGGAGGCAGTTTGCGGTCATTATTGATGAGATaGTCTAGGATAGAAGGGCTCAGGATGGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: YSGGSLRSLLMR*SRIEGLRMGCV
Trigger: CACACAGCCCATCCTGAGCCCTTCTATCCTAGACCATCTCATCAATAATGACCGCAAACTGCCTCCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000601170.5
CDS CCA 72 bp GCTGGCACCTGTGTGTCCAGGAAAACAATCCGTTCTTaGGTAATAAAGAAGTCGATGCCACTGGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: AGTCVSRKTIRS*VIKKSMPLVWL
Trigger: CAACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGAACGGATTGTTTTCCTGGACACACAGGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS CAA 72 bp GGCTGGCACCTGTGTGTCCAGGAAAACAATCCGTTCTaGGGTAATAAAGAAGTCGATGCCACTGGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: GWHLCVQENNPF*GNKEVDATGLV
Trigger: AACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGAACGGATTGTTTTCCTGGACACACAGGTGCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597598.1
CDS CCA 72 bp AGGATGGGCTGTGTGTCCAGGAAAACAATCCGTTCTTaGGTAATAAAGAAGTCGATGCCACTGGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: RMGCVSRKTIRS*VIKKSMPLVWL
Trigger: CAACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGAACGGATTGTTTTCCTGGACACACAGCCCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000601170.5
CDS CCA 72 bp TCCCCAGTACTTGACGGGCAGTTTGCAGGCTGTACTTaGATCTCGCAGAGCATAAGTTTCTCATTTACACGT +
Preference number: 6 (lower is better)
Translates to: SPVLDGQFAGCT*ISQSISFSFTR
Trigger: ACGTGTAAATGAGAAACTTATGCTCTGCGAGATCCAAGTACAGCCTGCAAACTGCCCGTCAAGTACTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596714.1
ENST00000597586.5
CDS CAA 72 bp CAGGATGGGCTGTGTGTCCAGGAAAACAATCCGTTCTaGGGTAATAAAGAAGTCGATGCCACTGGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: QDGLCVQENNPF*GNKEVDATGLV
Trigger: AACCAGACCAGTGGCATCGACTTCTTTATTACCCAAGAACGGATTGTTTTCCTGGACACACAGCCCATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270066.11
ENST00000595700.5
ENST00000601170.5