Pregenerated sensors for SMG8 (Homo sapiens)
Ensembl gene IDs: ENSG00000167447Ensembl transcript IDs: ENST00000300917.10, ENST00000543872.6, ENST00000578922.1, ENST00000580498.5, ENST00000580798.1, ENST00000582469.1
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCTTCCACAGTTGCAAGCACCAGTAGATCGAGCTCGGCTATTGTaGTATAGCACAGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: FLPQLQAPVDRARLL*YSTGGFLSASGFSP Trigger: TGGAGAAAAACCAGAGGCTGATAGAAATCCGCCTGTGCTATATCACAATAGCCGAGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| 3UTR GCA 90 bp | GAAGTCATAATTGGCTGCTTTGATATCAAAGGGATCATCTCGAGGTaGTTGTTTCCTTCCACAGTTGCAAGCACCAGTAGATCGAGCTCG | + |
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Preference number: 1 (lower is better) Translates to: EVIIGCFDIKGIISR*LFPSTVASTSRSSS Trigger: CGAGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGATCCCTTTGATATCAAAGCAGCCAATTATGACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| 3UTR-3UTR TCA 90 bp | AGCATCCGAATCTGGAGGAGCAGGAGAGGATTCATTTTTAGCAGGAGCAGGATCCGAGCTCGGCTATTGTaGTATAGCACAGGCGGATTT | + |
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Preference number: 2 (lower is better) Translates to: SIRIWRSRRGFIFSRSRIRARLL*YSTGGF Trigger: AAATCCGCCTGTGCTATATCACAATAGCCGAGCTCG...GATCCTGCTCCTGCTAAAAATGAATCCTCTCCTGCTCCTCCAGATTCGGATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| 3UTR CAA 90 bp | GTCATAATTGGCTGCTTTGATATCAAAGGGATCATCTCGAGGTGCTaGTTTCCTTCCACAGTTGCAAGCACCAGTAGATCGAGCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: VIIGCFDIKGIISRC*FPSTVASTSRSSSA Trigger: AGCCGAGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGATCCCTTTGATATCAAAGCAGCCAATTATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| 3UTR-3UTR CCA 90 bp | TCATCTCGAGGTGCTTGTTTCCTTCCACAGTTGCAAGCACCAGTAGATCGAGCTATTTCTATCAGCCTCTaGTTTTTCTCCAATTCACTA | + |
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Preference number: 2 (lower is better) Translates to: SSRGACFLPQLQAPVDRAISISL*FFSNSL Trigger: TAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAAT...AGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCAGGATCTGGAGTACTTGGTTCAAATACTGGGAAATTGATATGATCCAACATAATTGGCTGCTTTaGTATCAAAGGGATCATCTC | + |
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Preference number: 2 (lower is better) Translates to: RSRIWSTWFKYWEIDMIQHNWLL*YQRDHL Trigger: GAGATGATCCCTTTGATATCAAAGCAGCCAATTATG...TTGGATCATATCAATTTCCCAGTATTTGAACCAAGTACTCCAGATCCTGCTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| 3UTR TCA 72 bp | CAGTTGCAAGCACCAGTAGATCGAGCTCGGCTATTGTaGTATAGCACAGGCGGATTTCTATCAGCCTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: QLQAPVDRARLL*YSTGGFLSASG Trigger: ACCAGAGGCTGATAGAAATCCGCCTGTGCTATATCACAATAGCCGAGCTCGATCTACTGGTGCTTGCAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| 3UTR GCA 72 bp | AGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTaGCTTAAGAACCCCACGGAGCACCTTGTAGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: RIELAGKHLLCY*LKNPTEHLVAH Trigger: ATGAGCTACAAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| 3UTR GCA 72 bp | ATTGGCTGCTTTGATATCAAAGGGATCATCTCGAGGTaGTTGTTTCCTTCCACAGTTGCAAGCACCAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: IGCFDIKGIISR*LFPSTVASTSR Trigger: TCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGATCCCTTTGATATCAAAGCAGCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| 3UTR TCA 72 bp | CTTCCAGAAGCTGATAGAAGTCATAATTGGCTGCTTTaGTATCAAAGGGATCATCTCGAGGTGCTTGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: LPEADRSHNWLL*YQRDHLEVLVS Trigger: GGAAACAAGCACCTCGAGATGATCCCTTTGATATCAAAGCAGCCAATTATGACTTCTATCAGCTTCTGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR CCA 90 bp | GCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTGTATACCGGACATGGTGGTaGGCCTGGCTGAACCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: AGKHLLCYCLKNPTEHLVYRTWW*AWLNLS Trigger: GCTTAGGTTCAGCCAGGCCCACCACCATGTCCGGTA...TACAAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | GGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGGAATACCGGACATGGTaGTGGGCCTGGCTGAACCTA | + |
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Preference number: 4 (lower is better) Translates to: GLNWLENTYCVTALRTPREYRTW*WAWLNL Trigger: TAGGTTCAGCCAGGCCCACCACCATGTCCGGTATTC...CCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTAGGCACTGTGGGCCATaGGTAAAGCTTTTTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: LAGKHLLCYCLKNPTEHLRHCGP*VKLFGI Trigger: GATGCCAAAAAGCTTTACCCATGGCCCACAGTGCCT...AAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | GGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGACATGGTGGTGGGCCTaGCTGAACCTAAGCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: GLNWLENTYCVTALRTPRTWWWA*LNLSYL Trigger: CAGATAGCTTAGGTTCAGCCAGGCCCACCACCATGT...CCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| 3UTR CAA 72 bp | GGCTGCTTTGATATCAAAGGGATCATCTCGAGGTGCTaGTTTCCTTCCACAGTTGCAAGCACCAGTAGATCG | + |
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Preference number: 4 (lower is better) Translates to: GCFDIKGIISRC*FPSTVASTSRS Trigger: CGATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGATCCCTTTGATATCAAAGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR TCA 90 bp | CAGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCAATTCACTAGGACGTATCCTCTCTCCTCACAGAGCTaGTGGCCATTGCTCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: QADFYQPLVFLQFTRTYPLSSQS*WPLLQN Trigger: ATTTTGGAGCAATGGCCATCAGCTCTGTGAGGAGAG...AGGATACGTCCTAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAATCCGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTGGGATCATCTCGAGGTaGTTGTTTCCTTCCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: LAGKHLLCYCLKNPTEHLGIISR*LFPSTV Trigger: AACTGTGGAAGGAAACAAGCACCTCGAGATGATCCC...AAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | GGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGATCAGCATCCGAATCTaGAGGAGCAGGAGAGGATTC | + |
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Preference number: 4 (lower is better) Translates to: GLNWLENTYCVTALRTPRISIRI*RSRRGF Trigger: GAATCCTCTCCTGCTCCTCCAGATTCGGATGCTGAT...CCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | GGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGATTATGAGGCAAATTTaGCTGGTAGGCACTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GLNWLENTYCVTALRTPRIMRQI*LVGTVG Trigger: GCCCACAGTGCCTACCAGTCAAATTTGCCTCATAAT...CCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | GCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTGTAAGAGCCTGGGCAAGCTaGTTCTTATGGACAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: AGKHLLCYCLKNPTEHLVRAWAS*FLWTVI Trigger: AATGACTGTCCATAAGAATCAGCTTGCCCAGGCTCT...TACAAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | AGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCAATTCACTAGGACGTATCCTTCGAGCTCGGCTATTGTaGTATAGCACAGGCGGATTT | + |
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Preference number: 4 (lower is better) Translates to: RRISISLWFFSNSLGRILRARLL*YSTGGF Trigger: AAATCCGCCTGTGCTATATCACAATAGCCGAGCTCG...AAGGATACGTCCTAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAATCCGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR TCA 90 bp | TCGAGGTGCTTGTTTCCTTCCACAGTTGCAAGCACCAGTAGATCGAGCTCGGCTACTGGGAAATTGATATaGTCCAATTTTCCACAACAC | + |
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Preference number: 4 (lower is better) Translates to: SRCLFPSTVASTSRSSSATGKLI*SNFPQH Trigger: GTGTTGTGGAAAATTGGATCATATCAATTTCCCAGT...AGCCGAGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR GCA 90 bp | CAGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCAATTCACTAGGACGTATCCTGGGATCATCTCGAGGTaGTTGTTTCCTTCCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: QADFYQPLVFLQFTRTYPGIISR*LFPSTV Trigger: AACTGTGGAAGGAAACAAGCACCTCGAGATGATCCC...AGGATACGTCCTAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAATCCGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTCACTTATTGTGTTACTaGCTTAAGAACCCCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: LAGKHLLCYCLKNPTEHLHLLCY*LKNPTE Trigger: CTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTG...AAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | TCATCTCGAGGTGCTTGTTTCCTTCCACAGTTGCAAGCACCAGTAGATCGAGCTCATAATTGGCTGCTTTaGTATCAAAGGGATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: SSRGACFLPQLQAPVDRAHNWLL*YQRDHL Trigger: GAGATGATCCCTTTGATATCAAAGCAGCCAATTATG...AGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR TCA 90 bp | GGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGCATCAGGTGGAAGGGTaGTTTCTTGTTTTTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GLNWLENTYCVTALRTPRHQVEG*FLVFLG Trigger: ACCCAGAAAAACAAGAAATCACCCTTCCACCTGATG...CCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTAACCTAAGCTATCTGTaGATTGGCCCAAACTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LAGKHLLCYCLKNPTEHLNLSYL*IGPNSK Trigger: CTTTGAGTTTGGGCCAATCCACAGATAGCTTAGGTT...AAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | AGGAGCAGGATCTGGAGTACTTGGTTCAAATACTGGGAAATTGATATGATCCAAATCAGCATCCGAATCTaGAGGAGCAGGAGAGGATTC | + |
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Preference number: 4 (lower is better) Translates to: RSRIWSTWFKYWEIDMIQISIRI*RSRRGF Trigger: GAATCCTCTCCTGCTCCTCCAGATTCGGATGCTGAT...TTGGATCATATCAATTTCCCAGTATTTGAACCAAGTACTCCAGATCCTGCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR CCA 90 bp | AACAAAAACCAGCTCAAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTGTAGAATACCGGACATaGTGGTGGGCCTGGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: NKNQLKYRIELAGKHLLCVEYRT*WWAWLN Trigger: GTTCAGCCAGGCCCACCACCATGTCCGGTATTCTAC...ACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTTGAGCTGGTTTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| 3UTR CAA 72 bp | CTCAAGTATAGGATTGAACTGGCTGGAAAACACTTATaGTGTTACTGCCTTAAGAACCCCACGGAGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: LKYRIELAGKHL*CYCLKNPTEHL Trigger: AAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | AAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACGGACCTCTAGCATGTTaGCTGTACACTCGAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: KYRIELAGKHLLCYCLKNGPLAC*LYTRRA Trigger: GGCTCTTCGAGTGTACAGTCAACATGCTAGAGGTCC...GTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | AAGGGATCATCTCGAGGTGCTTGTTTCCTTCCACAGTTGCAAGCACCAGTAGATGATTTAGGTAATGAGTaGAATTTGTGCACACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: KGSSRGACFLPQLQAPVDDLGNE*NLCTQC Trigger: ACACTGTGTGCACAAATTTCACTCATTACCTAAATC...ATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGATCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR TCA 90 bp | GCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTGTACATAATTGGCTGCTTTaGTATCAAAGGGATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: AGKHLLCYCLKNPTEHLVHNWLL*YQRDHL Trigger: GAGATGATCCCTTTGATATCAAAGCAGCCAATTATG...TACAAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR GCA 90 bp | AAGGGATCATCTCGAGGTGCTTGTTTCCTTCCACAGTTGCAAGCACCAGTAGATGAAGTCATAATTGGCTaGTTTGATATCAAAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: KGSSRGACFLPQLQAPVDEVIIG*FDIKGI Trigger: GATCCCTTTGATATCAAAGCAGCCAATTATGACTTC...ATCTACTGGTGCTTGCAACTGTGGAAGGAAACAAGCACCTCGAGATGATCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR GCA 90 bp | AGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCTAAACTCAGGCTCGTaGTCTCTCCTTGGGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SIGLNWLENTYCVTALRTLNSGS*SLLGFE Trigger: CTCAAACCCAAGGAGAGAGCACGAGCCTGAGTTTAG...GGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTATGGGTAAAGCTTTTTaGCATCGGTTTTCTGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LAGKHLLCYCLKNPTEHLMGKAF*HRFSEN Trigger: ATTCTCAGAAAACCGATGCCAAAAAGCTTTACCCAT...AAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | AAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCTCTCCTCACAGAGCTaGTGGCCATTGCTCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: KYRIELAGKHLLCYCLKNLSSQS*WPLLQN Trigger: ATTTTGGAGCAATGGCCATCAGCTCTGTGAGGAGAG...GTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | ATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCATTGTGCACACAGTGTTaGTCAGTTAAACTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: IGLNWLENTYCVTALRTPLCTQC*SVKLLS Trigger: GGAGAGGAGTTTAACTGATCAACACTGTGTGCACAA...TGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | AACAAAAACCAGCTCAAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTCGAGCTCGGCTATTGTaGTATAGCACAGGCGGATTT | + |
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Preference number: 4 (lower is better) Translates to: NKNQLKYRIELAGKHLLCRARLL*YSTGGF Trigger: AAATCCGCCTGTGCTATATCACAATAGCCGAGCTCG...ACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTTGAGCTGGTTTTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | AACAAAAACCAGCTCAAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTATGTTAGCTCTCCAGTaGGTGACCCCAAGTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NKNQLKYRIELAGKHLLCMLALQ*VTPSPL Trigger: AAGAGGACTTGGGGTCACCCACTGGAGAGCTAACAT...ACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTTGAGCTGGTTTTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | CAGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCAATTCACTAGGACGTATCCTAGGATCTGGAGTACTTaGTTCAAATACTGGGAAATT | + |
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Preference number: 4 (lower is better) Translates to: QADFYQPLVFLQFTRTYPRIWST*FKYWEI Trigger: AATTTCCCAGTATTTGAACCAAGTACTCCAGATCCT...AGGATACGTCCTAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAATCCGCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR TCA 90 bp | TTCCAGAAGCTGATAGAAGTCATAATTGGCTGCTTTGATATCAAAGGGATCATCTTGTGCACACAGTGTTaGTCAGTTAAACTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FQKLIEVIIGCFDIKGIILCTQC*SVKLLS Trigger: GGAGAGGAGTTTAACTGATCAACACTGTGTGCACAA...GATGATCCCTTTGATATCAAAGCAGCCAATTATGACTTCTATCAGCTTCTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR GCA 90 bp | AGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCGGCGTATTTGTGAAATaGTGGACCTCTAGCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: SIGLNWLENTYCVTALRTGVFVK*WTSSML Trigger: CAACATGCTAGAGGTCCAGCATTTCACAAATACGCC...GGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR GCA 90 bp | AGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCAGAGCTGATGGCCATTaGTCCAAAATTTGTAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SIGLNWLENTYCVTALRTRADGH*SKICSS Trigger: ACTGCTACAAATTTTGGAGCAATGGCCATCAGCTCT...GGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | AGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCTCATGTAACTGCATaGCGTATTTGTGAAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SIGLNWLENTYCVTALRTPHVTA*RICEML Trigger: CAGCATTTCACAAATACGCCATGCAGTTACATGAGG...GGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | AGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCAATTCACTAGGACGTATCCTTATTTCTATCAGCCTCTaGTTTTTCTCCAATTCACTA | + |
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Preference number: 4 (lower is better) Translates to: RRISISLWFFSNSLGRILISISL*FFSNSL Trigger: TAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAAT...AAGGATACGTCCTAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAATCCGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR CCA 90 bp | AGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCAAGCTATCTGTGGATTaGCCCAAACTCAAAGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: SIGLNWLENTYCVTALRTKLSVD*PKLKAK Trigger: TTTAGCTTTGAGTTTGGGCCAATCCACAGATAGCTT...GGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | AGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCGATTTCTTGTTTTTCTaGGTAGAATACCGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SIGLNWLENTYCVTALRTDFLFF*VEYRTW Trigger: CCATGTCCGGTATTCTACCCAGAAAAACAAGAAATC...GGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | AGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCACTGGGAAATTGATATaGTCCAATTTTCCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SIGLNWLENTYCVTALRTTGKLI*SNFPQH Trigger: GTGTTGTGGAAAATTGGATCATATCAATTTCCCAGT...GGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | AACAAAAACCAGCTCAAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTGTATTTGTGAAATGCTaGACCTCTAGCATGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NKNQLKYRIELAGKHLLCVFVKC*TSSMLT Trigger: AGTCAACATGCTAGAGGTCCAGCATTTCACAAATAC...ACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTTGAGCTGGTTTTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | ATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCAAGTATAGGATTGAACTaGCTGGAAAACACTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGLNWLENTYCVTALRTPSIGLN*LENTYC Trigger: ACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT...TGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR TCA 90 bp | AAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACGATTTAGGTAATGAGTaGAATTTGTGCACACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KYRIELAGKHLLCYCLKNDLGNE*NLCTQC Trigger: ACACTGTGTGCACAAATTTCACTCATTACCTAAATC...GTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CCA 90 bp | AACAAAAACCAGCTCAAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTAGGATCTGGAGTACTTaGTTCAAATACTGGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: NKNQLKYRIELAGKHLLCRIWST*FKYWEI Trigger: AATTTCCCAGTATTTGAACCAAGTACTCCAGATCCT...ACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTTGAGCTGGTTTTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS CCA 90 bp | CGTCTTGCCGAAGATTCCCACAACGCAGATCTCATCCTCCCGCCATaGAGGCTCCGGTCCGCCAGCCGCGCTCCCTCCGCCCTCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLAEDSHNADLILPP*RLRSASRAPSALSR Trigger: CCTACTGAGGGCGGAGGGAGCGCGGCTGGCGGACCGGAGCCTCCATGGCGGGAGGATGAGATCTGCGTTGTGGGAATCTTCGGCAAGACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000580498.5 |
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| CDS TCA 90 bp | GGTCCTCGGCTCCACCGGCCTCACCCACGGCGCCAGCCTCAGTTCTaGTTCCAGGTCCTGGATCCCCAGGATCTTGGTGGCGAAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPRLHRPHPRRQPQF*FQVLDPQDLGGERE Trigger: CTCTCTTTCGCCACCAAGATCCTGGGGATCCAGGACCTGGAATCAGAACTGAGGCTGGCGCCGTGGGTGAGGCCGGTGGAGCCGAGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS CCA 90 bp | ACCGGCCTCACCCACGGCGCCAGCCTCAGTTCTGATTCCAGGTCCTaGATCCCCAGGATCTTGGTGGCGAAAGAGAGGAAAGACCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: TGLTHGASLSSDSRS*IPRILVAKERKDLS Trigger: CGACAGGTCTTTCCTCTCTTTCGCCACCAAGATCCTGGGGATCCAGGACCTGGAATCAGAACTGAGGCTGGCGCCGTGGGTGAGGCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS GCA 90 bp | TTCCTGACTGTAGTAGGCCTGCAGAAGGCTGTAGTCCTGGGAGCCTaGCTCAGTTCGGTTACCTTCCGCGACAGCTCCACTTCCCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FLTVVGLQKAVVLGA*LSSVTFRDSSTSPN Trigger: GTTCGGGGAAGTGGAGCTGTCGCGGAAGGTAACCGAACTGAGGCAGGCTCCCAGGACTACAGCCTTCTGCAGGCCTACTACAGTCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS CCA 90 bp | GGCATGCTGCAGCCTCCTTTTGGGAGAATGTTTCTTGGGCTTGTCTaGATGAGCTGGGTCTTGGTTCCGAGGAGGTTCTACCTTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GMLQPPFGRMFLGLV*MSWVLVPRRFYLEG Trigger: GCCCTCAAGGTAGAACCTCCTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGGAGGCTGCAGCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS CCA 90 bp | GGTCCTCCAGGGCATGCTGCAGCCTCCTTTTGGGAGAATGTTTCTTaGGCTTGTCTGGATGAGCTGGGTCTTGGTTCCGAGGAGGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GPPGHAAASFWENVS*ACLDELGLGSEEVL Trigger: TAGAACCTCCTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGGAGGCTGCAGCATGCCCTGGAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS TCA 90 bp | TGCTGCAGCCTCCTTTTGGGAGAATGTTTCTTGGGCTTGTCTGGATaGGCTGGGTCTTGGTTCCGAGGAGGTTCTACCTTGAGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CCSLLLGECFLGLSG*AGSWFRGGSTLRAP Trigger: TGGAGCCCTCAAGGTAGAACCTCCTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGGAGGCTGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS TCA 90 bp | AGGGGTGCAGGCACCAGCAAAGATTCCGGGTCCTTCACAGTACAATaGCTCCTAAGTTGGTCCAGCAACATACCTACTGGGTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGAGTSKDSGSFTVQ*LLSWSSNIPTGSSS Trigger: GGAGGAGGACCCAGTAGGTATGTTGCTGGACCAACTTAGGAGTCATTGTACTGTGAAGGACCCGGAATCTTTGCTGGTGCCTGCACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS TCA 90 bp | TCCAGCTTCCCCGCTCTGAAGAGCCCGACAAGCCCGGAGAAGCTGTaGATTGTCACAGATGGAGGTGAGGAGAAGATACAGAACTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSFPALKSPTSPEKL*IVTDGGEEKIQNFA Trigger: AGCAAAGTTCTGTATCTTCTCCTCACCTCCATCTGTGACAATTCACAGCTTCTCCGGGCTTGTCGGGCTCTTCAGAGCGGGGAAGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS GCA 90 bp | TATTCACAAGAGAGAACTTCTCGGAATTCAGGCGTAGAGCCGTCTTaGCGAAGATTCCCACAACGCAGATCTCATCCTCCCGCCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YSQERTSRNSGVEPS*RRFPQRRSHPPAME Trigger: CTCCATGGCGGGAGGATGAGATCTGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACGCCTGAATTCCGAGAAGTTCTCTCTTGTGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000580498.5 |
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| CDS GCA 90 bp | GGGAAGGCTGTGGGTTCCTGCCCACACTGTCATCGAAACCTTTCTTaGTTAGAACTAGCTCCACATGCTGCCATAGGAATTCCCGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKAVGSCPHCHRNLS*LELAPHAAIGIPEE Trigger: CTCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGACAGTGTGGGCAGGAACCCACAGCCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS CCA 90 bp | CAAAACCCAAAGGCCATCAGGTGGAAGGGTGATTTCTTGTTTTTCTaGGTAGAATACCGGACATGGTGGTGGGCCTGGCTGAACCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QNPKAIRWKGDFLFF*VEYRTWWWAWLNLR Trigger: CCTCAGGTTCAGCCAGGCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACCCTTCCACCTGATGGCCTTTGGGTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000300917.10 ENST00000543872.6 |
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| CDS CCA 90 bp | AGATTCTATAGATCTGGTCCTCCAGGGCATGCTGCAGCCTCCTTTTaGGAGAATGTTTCTTGGGCTTGTCTGGATGAGCTGGGTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RFYRSGPPGHAAASF*ENVSWACLDELGLG Trigger: ACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGGAGGCTGCAGCATGCCCTGGAGGACCAGATCTATAGAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS CCA 90 bp | CAAAACCCAAAGGCCATCAGGTGGAAGGGTGATTTCTTGTTTTTCTaGGTAGAATACCGGACATGGTGGTGGGCCTGGCTGAACCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNPKAIRWKGDFLFF*VEYRTWWWAWLNLS Trigger: GCTTAGGTTCAGCCAGGCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACCCTTCCACCTGATGGCCTTTGGGTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS CCA 90 bp | CTTCACAGTACAATGACTCCTAAGTTGGTCCAGCAACATACCTACTaGGTCCTCCTCCTGGCTTCCCGGTACTATGTACACGAAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHSTMTPKLVQQHTY*VLLLASRYYVHESL Trigger: CAAGCTTTCGTGTACATAGTACCGGGAAGCCAGGAGGAGGACCCAGTAGGTATGTTGCTGGACCAACTTAGGAGTCATTGTACTGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS TCA 90 bp | AAATCCACTAGCTGGCCTGAAGAACTGGAACTGCTGCTGTCAATGTaGAAGGAAAGTTGTTGTCGGCTGTGCTGCCTCATCACCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KSTSWPEELELLLSM*KESCCRLCCLITWY Trigger: ATACCAGGTGATGAGGCAGCACAGCCGACAACAACTTTCCTTTCACATTGACAGCAGCAGTTCCAGTTCTTCAGGCCAGCTAGTGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS TCA 90 bp | TGCTTAGAACTAGCTCCACATGCTGCCATAGGAATTCCCGAAGAGTaGAATCCACTAGCTGGCCTGAAGAACTGGAACTGCTGCTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLELAPHAAIGIPEE*NPLAGLKNWNCCCQ Trigger: TTGACAGCAGCAGTTCCAGTTCTTCAGGCCAGCTAGTGGATTTCACTCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS TCA 90 bp | TTCCTTCCACAGTTGCAAGCACCAGTAGATCGAGCTCGGCTATTGTaGTATAGCACAGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLPQLQAPVDRARLL*YSTGGFLSASGFSP Trigger: CGGAGAAAAACCAGAGGCTGATAGAAATCCGCCTGTGCTATATCACAATAGCCGAGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580498.5 |
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| CDS GCA 90 bp | CCCACACTGTCATCGAAACCTTTCTTGCTTAGAACTAGCTCCACATaGTGCCATAGGAATTCCCGAAGAGTGAAATCCACTAGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTLSSKPFLLRTSST*CHRNSRRVKSTSWP Trigger: AGGCCAGCTAGTGGATTTCACTCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGACAGTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS TCA 90 bp | GGACCAGAAGCAAGATATGACAGACAGAGAATAGGTAAAGGAGACTaGGGCACTGCAGCTTCTCTTGATGCTTCCAGAACTCGTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPEARYDRQRIGKGD*GTAASLDASRTRVL Trigger: AAGCACACGAGTTCTGGAAGCATCAAGAGAAGCTGCAGTGCCTCAGTCTCCTTTACCTATTCTCTGTCTGTCATATCTTGCTTCTGGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS TCA 90 bp | TTCCTTCCACAGTTGCAAGCACCAGTAGATCGAGCTCGGCTATTGTaGTATAGCACAGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLPQLQAPVDRARLL*YSTGGFLSASGFSP Trigger: AGGAGAAAAACCAGAGGCTGATAGAAATCCGCCTGTGCTATATCACAATAGCCGAGCTCGATCTACTGGTGCTTGCAACTGTGGAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000582469.1 |
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| CDS CCA 90 bp | GCCTGGGAGATACTCAACTGTGGATGCCTGTCGATCAACGAAGTTTaGCCTCTTCTCAGTTTTCACTTCTACTTGACCATGAACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AWEILNCGCLSINEV*PLLSFHFYLTMNFW Trigger: CCAGAAGTTCATGGTCAAGTAGAAGTGAAAACTGAGAAGAGGCCAAACTTCGTTGATCGACAGGCATCCACAGTTGAGTATCTCCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000580498.5 |
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| CDS-3UTR CAA 90 bp | CTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTTGTTTCCTTCCACAGTaGCAAGCACCAGTAGATCGA | + |
|
Preference number: 5 (lower is better) Translates to: LAGKHLLCYCLKNPTEHLCFLPQ*QAPVDR Trigger: TCGATCTACTGGTGCTTGCAACTGTGGAAGGAAACA...AAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS TCA 90 bp | GCCCACTTCCCATTACTTTCATTACTTTGTCAGGCCCAGAGCACATaGATCTCCGACCTCGAGAGTCTTCATATTCAAAGCCCACAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AHFPLLSLLCQAQST*ISDLESLHIQSPQK Trigger: CTTTTGTGGGCTTTGAATATGAAGACTCTCGAGGTCGGAGATTCATGTGCTCTGGGCCTGACAAAGTAATGAAAGTAATGGGAAGTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300917.10 ENST00000543872.6 |
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| CDS TCA 90 bp | ATGCATAAGGAAATCTCAAAACCCAAAGGCCATCAGGTGGAAGGGTaGTTTCTTGTTTTTCTGGGTAGAATACCGGACATGGTGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MHKEISKPKGHQVEG*FLVFLGRIPDMVVG Trigger: GCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACCCTTCCACCTGATGGCCTTTGGGTTTTGAGATTTCCTTATGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000582469.1 |
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| CDS GCA 90 bp | ACACTGTCATCGAAACCTTTCTTGCTTAGAACTAGCTCCACATGCTaGCATAGGAATTCCCGAAGAGTGAAATCCACTAGCTGGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TLSSKPFLLRTSSTC*HRNSRRVKSTSWPE Trigger: TTCAGGCCAGCTAGTGGATTTCACTCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGACAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS-3UTR CAA 90 bp | CAGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCAATTCACTAGGACGTATCCTTGTTTCCTTCCACAGTaGCAAGCACCAGTAGATCGA | + |
|
Preference number: 5 (lower is better) Translates to: QADFYQPLVFLQFTRTYPCFLPQ*QAPVDR Trigger: TCGATCTACTGGTGCTTGCAACTGTGGAAGGAAACA...AGGATACGTCCTAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAATCCGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS-3UTR CAA 90 bp | AGGCGGATTTCTATCAGCCTCTGGTTTTTCTCCAATTCACTAGGACGTATCCTTATCATCTCGAGGTGCTaGTTTCCTTCCACAGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRISISLWFFSNSLGRILIISRC*FPSTVA Trigger: TGCAACTGTGGAAGGAAACAAGCACCTCGAGATGAT...AAGGATACGTCCTAGTGAATTGGAGAAAAACCAGAGGCTGATAGAAATCCGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580798.1 |
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| CDS TCA 90 bp | CCCAAACTCAAAGCTAAACTCAGGCTCGTGCTCTCTCCTTGGGTTTaGGGTTCTTTTTCTTTAAGTTTATCAGCATCCGAATCTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PKLKAKLRLVLSPWV*GSFSLSLSASESGG Trigger: TCCTCCAGATTCGGATGCTGATAAACTTAAAGAAAAAGAACCTCAAACCCAAGGAGAGAGCACGAGCCTGAGTTTAGCTTTGAGTTTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000580498.5 ENST00000582469.1 |
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| CDS-3UTR CAA 90 bp | CTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGAGCACCTTGCTGGAAAACACTTATaGTGTTACTGCCTTAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LAGKHLLCYCLKNPTEHLAGKHL*CYCLKN Trigger: GTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGC...AAGGTGCTCCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CAA 90 bp | GGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCACGGTGGAAGGGTGATTTCTaGTTTTTCTGGGTAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: GLNWLENTYCVTALRTPRWKGDF*FFWVEY Trigger: GTATTCTACCCAGAAAAACAAGAAATCACCCTTCCA...CCGTGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CAA 90 bp | AAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACTGGACCTCTAGCATGTaGACTGTACACTCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KYRIELAGKHLLCYCLKNWTSSM*TVHSKS Trigger: GCTCTTCGAGTGTACAGTCAACATGCTAGAGGTCCA...GTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CAA 90 bp | AGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCATCATCTCGAGGTGCTaGTTTCCTTCCACAGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SIGLNWLENTYCVTALRTIISRC*FPSTVA Trigger: TGCAACTGTGGAAGGAAACAAGCACCTCGAGATGAT...GGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CAA 90 bp | AACAAAAACCAGCTCAAGTATAGGATTGAACTGGCTGGAAAACACTTATTGTGTGCTCGTGCTCTCTCCTaGGGTTTGAGGTTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKNQLKYRIELAGKHLLCARALS*GLRFFF Trigger: GAAAAAGAACCTCAAACCCAAGGAGAGAGCACGAGC...ACACAATAAGTGTTTTCCAGCCAGTTCAATCCTATACTTGAGCTGGTTTTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS-3UTR CAA 90 bp | ATAGGATTGAACTGGCTGGAAAACACTTATTGTGTTACTGCCTTAAGAACCCCAGCTCTCTCCTTGGGTTaGAGGTTCTTTTTCTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGLNWLENTYCVTALRTPALSLG*RFFFFK Trigger: CTTAAAGAAAAAGAACCTCAAACCCAAGGAGAGAGC...TGGGGTTCTTAAGGCAGTAACACAATAAGTGTTTTCCAGCCAGTTCAATCCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000582469.1 |
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| CDS CCA 90 bp | TCTAGTCCTGATGACAATGTCCCAAGGCATAAGATAATTTGTTCCTaGAATAAAGCCCTGTTGGTCCAAACCTGTATGAAAGTTATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSPDDNVPRHKIICS*NKALLVQTCMKVIR Trigger: TCTTATAACTTTCATACAGGTTTGGACCAACAGGGCTTTATTCCAGGAACAAATTATCTTATGCCTTGGGACATTGTCATCAGGACTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300917.10 ENST00000543872.6 |
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| CDS CCA 72 bp | GAAGATTCCCACAACGCAGATCTCATCCTCCCGCCATaGAGGCTCCGGTCCGCCAGCCGCGCTCCCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: EDSHNADLILPP*RLRSASRAPSA Trigger: GGCGGAGGGAGCGCGGCTGGCGGACCGGAGCCTCCATGGCGGGAGGATGAGATCTGCGTTGTGGGAATCTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000580498.5 |
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| CDS TCA 72 bp | CTCCACCGGCCTCACCCACGGCGCCAGCCTCAGTTCTaGTTCCAGGTCCTGGATCCCCAGGATCTTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LHRPHPRRQPQF*FQVLDPQDLGG Trigger: GCCACCAAGATCCTGGGGATCCAGGACCTGGAATCAGAACTGAGGCTGGCGCCGTGGGTGAGGCCGGTGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS GCA 72 bp | GTAGTAGGCCTGCAGAAGGCTGTAGTCCTGGGAGCCTaGCTCAGTTCGGTTACCTTCCGCGACAGCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: VVGLQKAVVLGA*LSSVTFRDSST Trigger: AGTGGAGCTGTCGCGGAAGGTAACCGAACTGAGGCAGGCTCCCAGGACTACAGCCTTCTGCAGGCCTACTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | ACCCACGGCGCCAGCCTCAGTTCTGATTCCAGGTCCTaGATCCCCAGGATCTTGGTGGCGAAAGAGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: THGASLSSDSRS*IPRILVAKERK Trigger: TTTCCTCTCTTTCGCCACCAAGATCCTGGGGATCCAGGACCTGGAATCAGAACTGAGGCTGGCGCCGTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS TCA 72 bp | CCCGCTCTGAAGAGCCCGACAAGCCCGGAGAAGCTGTaGATTGTCACAGATGGAGGTGAGGAGAAGATACAG | + |
|
Preference number: 6 (lower is better) Translates to: PALKSPTSPEKL*IVTDGGEEKIQ Trigger: CTGTATCTTCTCCTCACCTCCATCTGTGACAATTCACAGCTTCTCCGGGCTTGTCGGGCTCTTCAGAGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | GGGCATGCTGCAGCCTCCTTTTGGGAGAATGTTTCTTaGGCTTGTCTGGATGAGCTGGGTCTTGGTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHAAASFWENVS*ACLDELGLGSE Trigger: CTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGGAGGCTGCAGCATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 90 bp | CACCAGCAAAGATTCCGGGTCCTTCACAGTACAATGACTCCTAAGTaGGTCCAGCAACATACCTACTGGGTCCTCCTCCTGGCTTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: HQQRFRVLHSTMTPK*VQQHTYWVLLLASR Trigger: CCGGGAAGCCAGGAGGAGGACCCAGTAGGTATGTTGCTGGACCAACTTAGGAGTCATTGTACTGTGAAGGACCCGGAATCTTTGCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS GCA 72 bp | GAGAGAACTTCTCGGAATTCAGGCGTAGAGCCGTCTTaGCGAAGATTCCCACAACGCAGATCTCATCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ERTSRNSGVEPS*RRFPQRRSHPP Trigger: GGGAGGATGAGATCTGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACGCCTGAATTCCGAGAAGTTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000580498.5 |
||
| CDS CCA 72 bp | AGATCTGGTCCTCCAGGGCATGCTGCAGCCTCCTTTTaGGAGAATGTTTCTTGGGCTTGTCTGGATGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSGPPGHAAASF*ENVSWACLDEL Trigger: CAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGGAGGCTGCAGCATGCCCTGGAGGACCAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | GTGGTGGGCCTGGCTGAACCTAAGCTATCTGTGGATTaGCCCAAACTCAAAGCTAAACTCAGGCTCGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VVGLAEPKLSVD*PKLKAKLRLVL Trigger: GAGCACGAGCCTGAGTTTAGCTTTGAGTTTGGGCCAATCCACAGATAGCTTAGGTTCAGCCAGGCCCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582469.1 |
||
| CDS CCA 72 bp | TTTGGGAGAATGTTTCTTGGGCTTGTCTGGATGAGCTaGGTCTTGGTTCCGAGGAGGTTCTACCTTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FGRMFLGLVWMS*VLVPRRFYLEG Trigger: GCCCTCAAGGTAGAACCTCCTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | TCCTCCTGGCTTCCCGGTACTATGTACACGAAAGCTTaGTTGGCAGGCACAGTAAAGAGGCAGTTGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSWLPGTMYTKA*LAGTVKRQLML Trigger: GAGCATCAACTGCCTCTTTACTGTGCCTGCCAACCAAGCTTTCGTGTACATAGTACCGGGAAGCCAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | AGTTGGTCCAGCAACATACCTACTGGGTCCTCCTCCTaGCTTCCCGGTACTATGTACACGAAAGCTTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWSSNIPTGSSS*LPGTMYTKAWL Trigger: CAACCAAGCTTTCGTGTACATAGTACCGGGAAGCCAGGAGGAGGACCCAGTAGGTATGTTGCTGGACCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | AAGGCCATCAGGTGGAAGGGTGATTTCTTGTTTTTCTaGGTAGAATACCGGACATGGTGGTGGGCCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KAIRWKGDFLFF*VEYRTWWWAWL Trigger: CAGCCAGGCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACCCTTCCACCTGATGGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000582469.1 |
||
| CDS CAA 72 bp | AGAGAGAACTTCTCGGAATTCAGGCGTAGAGCCGTCTaGCCGAAGATTCCCACAACGCAGATCTCATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RENFSEFRRRAV*PKIPTTQISSS Trigger: GGAGGATGAGATCTGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACGCCTGAATTCCGAGAAGTTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000580498.5 |
||
| CDS CAA 72 bp | GTTCCGAGGAGGTTCTACCTTGAGGGCTCCATTGAGTaGAAAGAGGAAAAGGAGTCTAGGTGGGCAAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VPRRFYLEGSIE*KEEKESRWARS Trigger: CGACCTTGCCCACCTAGACTCCTTTTCCTCTTTCAACTCAATGGAGCCCTCAAGGTAGAACCTCCTCGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 72 bp | CTCCTCCTGGCTTCCCGGTACTATGTACACGAAAGCTaGGTTGGCAGGCACAGTAAAGAGGCAGTTGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLASRYYVHES*VGRHSKEAVDA Trigger: AGCATCAACTGCCTCTTTACTGTGCCTGCCAACCAAGCTTTCGTGTACATAGTACCGGGAAGCCAGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 90 bp | GTATTCACAAGAGAGAACTTCTCGGAATTCAGGCGTAGAGCCGTCTaGCCGAAGATTCCCACAACGCAGATCTCATCCTCCCGCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: VFTRENFSEFRRRAV*PKIPTTQISSSRHG Trigger: TCCATGGCGGGAGGATGAGATCTGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACGCCTGAATTCCGAGAAGTTCTCTCTTGTGAATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000580498.5 |
||
| CDS CAA 90 bp | TACTGGGTCCTCCTCCTGGCTTCCCGGTACTATGTACACGAAAGCTaGGTTGGCAGGCACAGTAAAGAGGCAGTTGATGCTCTGATTAGT | + |
|
Preference number: 6 (lower is better) Translates to: YWVLLLASRYYVHES*VGRHSKEAVDALIS Trigger: ACTAATCAGAGCATCAACTGCCTCTTTACTGTGCCTGCCAACCAAGCTTTCGTGTACATAGTACCGGGAAGCCAGGAGGAGGACCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 90 bp | TGGGAAGGCTGTGGGTTCCTGCCCACACTGTCATCGAAACCTTTCTaGCTTAGAACTAGCTCCACATGCTGCCATAGGAATTCCCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WEGCGFLPTLSSKPF*LRTSSTCCHRNSRR Trigger: TCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGACAGTGTGGGCAGGAACCCACAGCCTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS TCA 72 bp | AGCTGGCCTGAAGAACTGGAACTGCTGCTGTCAATGTaGAAGGAAAGTTGTTGTCGGCTGTGCTGCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SWPEELELLLSM*KESCCRLCCLI Trigger: GATGAGGCAGCACAGCCGACAACAACTTTCCTTTCACATTGACAGCAGCAGTTCCAGTTCTTCAGGCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS TCA 72 bp | CTAGCTCCACATGCTGCCATAGGAATTCCCGAAGAGTaGAATCCACTAGCTGGCCTGAAGAACTGGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAPHAAIGIPEE*NPLAGLKNWNC Trigger: GCAGTTCCAGTTCTTCAGGCCAGCTAGTGGATTTCACTCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | ACAATGACTCCTAAGTTGGTCCAGCAACATACCTACTaGGTCCTCCTCCTGGCTTCCCGGTACTATGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: TMTPKLVQQHTY*VLLLASRYYVH Trigger: GTGTACATAGTACCGGGAAGCCAGGAGGAGGACCCAGTAGGTATGTTGCTGGACCAACTTAGGAGTCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 72 bp | AGAATGTTTCTTGGGCTTGTCTGGATGAGCTGGGTCTaGGTTCCGAGGAGGTTCTACCTTGAGGGCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: RMFLGLVWMSWV*VPRRFYLEGSI Trigger: AATGGAGCCCTCAAGGTAGAACCTCCTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 72 bp | AGATTCCGGGTCCTTCACAGTACAATGACTCCTAAGTaGGTCCAGCAACATACCTACTGGGTCCTCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RFRVLHSTMTPK*VQQHTYWVLLL Trigger: CAGGAGGAGGACCCAGTAGGTATGTTGCTGGACCAACTTAGGAGTCATTGTACTGTGAAGGACCCGGAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 72 bp | ACTGGAACTGCTGCTGTCAATGTGAAAGGAAAGTTGTaGTCGGCTGTGCTGCCTCATCACCTGGTATCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGTAAVNVKGKL*SAVLPHHLVSP Trigger: AGGCGATACCAGGTGATGAGGCAGCACAGCCGACAACAACTTTCCTTTCACATTGACAGCAGCAGTTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 90 bp | AAAAGGAGTCTAGGTGGGCAAGGTCGGCAGTTTAGCTTCCAGTCTTaGCCAACTGGACAATCCTTAATGGCTGTTTTAAGGAGCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KRSLGGQGRQFSFQS*PTGQSLMAVLRSGR Trigger: CCTGCCGCTCCTTAAAACAGCCATTAAGGATTGTCCAGTTGGCAAAGACTGGAAGCTAAACTGCCGACCTTGCCCACCTAGACTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 90 bp | CCTTTTGGGAGAATGTTTCTTGGGCTTGTCTGGATGAGCTGGGTCTaGGTTCCGAGGAGGTTCTACCTTGAGGGCTCCATTGAGTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PFGRMFLGLVWMSWV*VPRRFYLEGSIELK Trigger: TTTCAACTCAATGGAGCCCTCAAGGTAGAACCTCCTCGGAACCAAGACCCAGCTCATCCAGACAAGCCCAAGAAACATTCTCCCAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 90 bp | AGGAAATCTCAAAACCCAAAGGCCATCAGGTGGAAGGGTGATTTCTaGTTTTTCTGGGTAGAATACCGGACATGGTGGTGGGCCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RKSQNPKAIRWKGDF*FFWVEYRTWWWAWL Trigger: CAGCCAGGCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACCCTTCCACCTGATGGCCTTTGGGTTTTGAGATTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000582469.1 |
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| CDS CAA 90 bp | AGTCCTTCCGGTCCGTTAGTAAAACCGACCGGCTTTCGTCCAATTTaGAAATCCTTCCTCCGCTTCTTCAGTTCCTGCTTTCCCGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: SPSGPLVKPTGFRPI*KSFLRFFSSCFPVT Trigger: AGTGACGGGAAAGCAGGAACTGAAGAAGCGGAGGAAGGATTTCAAAATTGGACGAAAGCCGGTCGGTTTTACTAACGGACCGGAAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | TTCTTGTTTTTCTGGGTAGAATACCGGACATGGTGGTaGGCCTGGCTGAACCTAAGCTATCTGTGGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLFFWVEYRTWW*AWLNLSYLWIG Trigger: GCCAATCCACAGATAGCTTAGGTTCAGCCAGGCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582469.1 |
||
| CDS CCA 72 bp | GGTGATTTCTTGTTTTTCTGGGTAGAATACCGGACATaGTGGTGGGCCTGGCTGAACCTAAGCTATCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GDFLFFWVEYRT*WWAWLNLSYLW Trigger: CCACAGATAGCTTAGGTTCAGCCAGGCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582469.1 |
||
| CDS CAA 72 bp | AGAACTGGAACTGCTGCTGTCAATGTGAAAGGAAAGTaGTTGTCGGCTGTGCTGCCTCATCACCTGGTATCG | + |
|
Preference number: 6 (lower is better) Translates to: RTGTAAVNVKGK*LSAVLPHHLVS Trigger: CGATACCAGGTGATGAGGCAGCACAGCCGACAACAACTTTCCTTTCACATTGACAGCAGCAGTTCCAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS GCA 72 bp | GTGGGTTCCTGCCCACACTGTCATCGAAACCTTTCTTaGTTAGAACTAGCTCCACATGCTGCCATAGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: VGSCPHCHRNLS*LELAPHAAIGI Trigger: AATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGACAGTGTGGGCAGGAACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 72 bp | CTAGGTGGGCAAGGTCGGCAGTTTAGCTTCCAGTCTTaGCCAACTGGACAATCCTTAATGGCTGTTTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGGQGRQFSFQS*PTGQSLMAVLR Trigger: CCTTAAAACAGCCATTAAGGATTGTCCAGTTGGCAAAGACTGGAAGCTAAACTGCCGACCTTGCCCACCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 72 bp | TGTGGGTTCCTGCCCACACTGTCATCGAAACCTTTCTaGCTTAGAACTAGCTCCACATGCTGCCATAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CGFLPTLSSKPF*LRTSSTCCHRN Trigger: ATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGACAGTGTGGGCAGGAACCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 72 bp | CATGGCGTATTTGTGAAATGCTGGACCTCTAGCATGTaGACTGTACACTCGAAGAGCCTGGGCAAGCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: HGVFVKCWTSSM*TVHSKSLGKLI Trigger: AATCAGCTTGCCCAGGCTCTTCGAGTGTACAGTCAACATGCTAGAGGTCCAGCATTTCACAAATACGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000582469.1 |
||
| CDS CAA 72 bp | CAAAACCCAAAGGCCATCAGGTGGAAGGGTGATTTCTaGTTTTTCTGGGTAGAATACCGGACATGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QNPKAIRWKGDF*FFWVEYRTWWW Trigger: CCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACCCTTCCACCTGATGGCCTTTGGGTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000582469.1 |
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| CDS CAA 90 bp | TGTACACTCGAAGAGCCTGGGCAAGCTGATTCTTATGGACAGTCATaGTGTAATTATGAGGCAAATTTGACTGGTAGGCACTGTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CTLEEPGQADSYGQS*CNYEANLTGRHCGP Trigger: TGGCCCACAGTGCCTACCAGTCAAATTTGCCTCATAATTACACAATGACTGTCCATAAGAATCAGCTTGCCCAGGCTCTTCGAGTGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000582469.1 |
||
| CDS CAA 90 bp | TGCCTGGGAGATACTCAACTGTGGATGCCTGTCGATCAACGAAGTTaGGCCTCTTCTCAGTTTTCACTTCTACTTGACCATGAACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLGDTQLWMPVDQRS*ASSQFSLLLDHELL Trigger: CAGAAGTTCATGGTCAAGTAGAAGTGAAAACTGAGAAGAGGCCAAACTTCGTTGATCGACAGGCATCCACAGTTGAGTATCTCCCAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000580498.5 |
||
| CDS TCA 72 bp | TGGTTGGCAGGCACAGTAAAGAGGCAGTTGATGCTCTaGTTAGTCAAGACACGACTCTTCCGGAAGATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: WLAGTVKRQLML*LVKTRLFRKIL Trigger: TAGAATCTTCCGGAAGAGTCGTGTCTTGACTAATCAGAGCATCAACTGCCTCTTTACTGTGCCTGCCAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | GATTTCTTGTTTTTCTGGGTAGAATACCGGACATGGTaGTGGGCCTGGCTGAACCTAAGCTATCTGTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: DFLFFWVEYRTW*WAWLNLSYLWI Trigger: AATCCACAGATAGCTTAGGTTCAGCCAGGCCCACCACCATGTCCGGTATTCTACCCAGAAAAACAAGAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582469.1 |
||
| CDS CAA 72 bp | GCAGGGCCTAGTTTAACCAAAGACCAGCTGGAGAATTaGGGTAGGAGACCTTTAGGGCAATTTGAATGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPSLTKDQLEN*GRRPLGQFECS Trigger: GCTACATTCAAATTGCCCTAAAGGTCTCCTACCCAAATTCTCCAGCTGGTCTTTGGTTAAACTAGGCCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300917.10 ENST00000543872.6 |
||
| CDS CAA 72 bp | GGTCCGTTAGTAAAACCGACCGGCTTTCGTCCAATTTaGAAATCCTTCCTCCGCTTCTTCAGTTCCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GPLVKPTGFRPI*KSFLRFFSSCF Trigger: AAAGCAGGAACTGAAGAAGCGGAGGAAGGATTTCAAAATTGGACGAAAGCCGGTCGGTTTTACTAACGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543872.6 ENST00000578922.1 |
||
| CDS CAA 90 bp | TTTAAAGCTGATTCCTTTGGCCCACTTCCCATTACTTTCATTACTTaGTCAGGCCCAGAGCACATGAATCTCCGACCTCGAGAGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FKADSFGPLPITFIT*SGPEHMNLRPRESS Trigger: TGAAGACTCTCGAGGTCGGAGATTCATGTGCTCTGGGCCTGACAAAGTAATGAAAGTAATGGGAAGTGGGCCAAAGGAATCAGCTTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300917.10 ENST00000543872.6 |
||
| CDS GCA 72 bp | CAGTTAAACTCCTCTCCTCACAGAGCTGATGGCCATTaGTCCAAAATTTGTAGCAGTCCTCATGTAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLNSSPHRADGH*SKICSSPHVTA Trigger: TGCAGTTACATGAGGACTGCTACAAATTTTGGAGCAATGGCCATCAGCTCTGTGAGGAGAGGAGTTTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 ENST00000582469.1 |
||
| CDS CCA 72 bp | CTTCTGATAAGTAGGAAGTTCAAAATGGGAAGGCTGTaGGTTCCTGCCCACACTGTCATCGAAACCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLISRKFKMGRL*VPAHTVIETFL Trigger: AAGAAAGGTTTCGATGACAGTGTGGGCAGGAACCCACAGCCTTCCCATTTTGAACTTCCTACTTATCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
||
| CDS CCA 72 bp | AATTTGAATGTAGCATGCCTGGGAGATACTCAACTGTaGATGCCTGTCGATCAACGAAGTTTGGCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NLNVACLGDTQL*MPVDQRSLASS Trigger: AGAAGAGGCCAAACTTCGTTGATCGACAGGCATCCACAGTTGAGTATCTCCCAGGCATGCTACATTCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000580498.5 |
||
| CDS TCA 72 bp | CCATTACTTTCATTACTTTGTCAGGCCCAGAGCACATaGATCTCCGACCTCGAGAGTCTTCATATTCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLLSLLCQAQST*ISDLESLHIQS Trigger: GCTTTGAATATGAAGACTCTCGAGGTCGGAGATTCATGTGCTCTGGGCCTGACAAAGTAATGAAAGTAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300917.10 ENST00000543872.6 |
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| CDS TCA 72 bp | GAAATCTCAAAACCCAAAGGCCATCAGGTGGAAGGGTaGTTTCTTGTTTTTCTGGGTAGAATACCGGACATG | + |
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Preference number: 6 (lower is better) Translates to: EISKPKGHQVEG*FLVFLGRIPDM Trigger: CATGTCCGGTATTCTACCCAGAAAAACAAGAAATCACCCTTCCACCTGATGGCCTTTGGGTTTTGAGATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000582469.1 |
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| CDS GCA 72 bp | TCATCGAAACCTTTCTTGCTTAGAACTAGCTCCACATaGTGCCATAGGAATTCCCGAAGAGTGAAATCCACT | + |
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Preference number: 6 (lower is better) Translates to: SSKPFLLRTSST*CHRNSRRVKST Trigger: AGTGGATTTCACTCTTCGGGAATTCCTATGGCAGCATGTGGAGCTAGTTCTAAGCAAGAAAGGTTTCGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000578922.1 |
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| CDS CCA 72 bp | CTTCTCAGTTTTCACTTCTACTTGACCATGAACTTCTaGATTATCTCCTCCTGCTTGTGGATCAGCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: LLSFHFYLTMNF*IISSCLWISWI Trigger: TATCCAGCTGATCCACAAGCAGGAGGAGATAATCCAGAAGTTCATGGTCAAGTAGAAGTGAAAACTGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300917.10 ENST00000543872.6 ENST00000580498.5 |
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| CDS CAA 90 bp | TATATAAGGGCATGTCACTATTTAGGGCTTTTAAAGCTGATTCCTTaGGCCCACTTCCCATTACTTTCATTACTTTGTCAGGCCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: YIRACHYLGLLKLIP*AHFPLLSLLCQAQS Trigger: GCTCTGGGCCTGACAAAGTAATGAAAGTAATGGGAAGTGGGCCAAAGGAATCAGCTTTAAAAGCCCTAAATAGTGACATGCCCTTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300917.10 ENST00000543872.6 |
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| CDS CAA 72 bp | GCATGTCACTATTTAGGGCTTTTAAAGCTGATTCCTTaGGCCCACTTCCCATTACTTTCATTACTTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ACHYLGLLKLIP*AHFPLLSLLCQ Trigger: CTGACAAAGTAATGAAAGTAATGGGAAGTGGGCCAAAGGAATCAGCTTTAAAAGCCCTAAATAGTGACATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300917.10 ENST00000543872.6 |
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