RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMG7 (Homo sapiens)

Ensembl gene IDs: ENSG00000116698

Ensembl transcript IDs: ENST00000347615.6, ENST00000367537.7, ENST00000367538.1, ENST00000419169.5, ENST00000440812.7, ENST00000444547.6, ENST00000493045.1, ENST00000493609.1, ENST00000495321.1, ENST00000502375.1, ENST00000507406.1, ENST00000507469.5, ENST00000507691.6, ENST00000508461.5, ENST00000515829.6, ENST00000638826.1

Found 1308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTaGAGGGCATTCCCTGCTGGAGTCTCCTGGCCAGAGGAAGGCCTA +
Preference number: 1 (lower is better)
Translates to: TTHTVSSIGARAPTE*RAFPAGVSWPEEGL
Trigger: TAGGCCTTCCTCTGGCCAGGAGACTCCAGCAGGGAATGCCCTTCACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 90 bp TGCCACCTGCAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATaGCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCC +
Preference number: 1 (lower is better)
Translates to: CHLQGTVWASPANPT*HGLWSLHSQVATLA
Trigger: GGCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR TCA 90 bp CATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTaGCAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTG +
Preference number: 1 (lower is better)
Translates to: HFVHTQRAGGILTPS*QRETEKRAATCRGL
Trigger: CAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR TCA 90 bp GTCTCCTGGCCAGAGGAAGGCCTACCAGAGCCTTCTGACAGGCCTTaGACTCTCCCTTATGGAACATTTCCACTGGCTGAAGAGGTCGGT +
Preference number: 1 (lower is better)
Translates to: VSWPEEGLPEPSDRP*TLPYGTFPLAEEVG
Trigger: ACCGACCTCTTCAGCCAGTGGAAATGTTCCATAAGGGAGAGTTCAAGGCCTGTCAGAAGGCTCTGGTAGGCCTTCCTCTGGCCAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CCA 90 bp ACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTaGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTT +
Preference number: 1 (lower is better)
Translates to: TARNRKEGCHLQGTV*ASPANPTCHGLWSL
Trigger: AAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR GCA 90 bp ACGACGTCGTGTTTTCTTCTGTGCCTGATGGGCACATGTCCGTGCTaGCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGCAGCT +
Preference number: 1 (lower is better)
Translates to: TTSCFLLCLMGTCPC*LEFHSESGGWETAA
Trigger: AGCTGCAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCACAGAAGAAAACACGACGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 90 bp TGGACGACGTCGTGTTTTCTTCTGTGCCTGATGGGCACATGTCCGTaGTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGCA +
Preference number: 1 (lower is better)
Translates to: WTTSCFLLCLMGTCP*CLEFHSESGGWETA
Trigger: TGCAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCACAGAAGAAAACACGACGTCGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CCA 90 bp AGCCTTCTGACAGGCCTTGAACTCTCCCTTATGGAACATTTCCACTaGCTGAAGAGGTCGGTTCCCCATCCTGTCACCACCAACCTCTCA +
Preference number: 1 (lower is better)
Translates to: SLLTGLELSLMEHFH*LKRSVPHPVTTNLS
Trigger: TGAGAGGTTGGTGGTGACAGGATGGGGAACCGACCTCTTCAGCCAGTGGAAATGTTCCATAAGGGAGAGTTCAAGGCCTGTCAGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 90 bp CTGTCACCACCAACCTCTCACAGGAGCAGTGAACGGGGCTTTCCTTaGTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAG +
Preference number: 1 (lower is better)
Translates to: LSPPTSHRSSERGFP*YTLTRSTPVYGRIQ
Trigger: CTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTCACTGCTCCTGTGAGAGGTTGGTGGTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 90 bp AGCCAACTGATTATAAGGCTGACCATTGGAGGGGACAAGCTGAGCTaGATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTTCTGTA +
Preference number: 1 (lower is better)
Translates to: SQLIIRLTIGGDKLS*MPIVGLCLAGLVSV
Trigger: TACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATAATCAGTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
3UTR TCA 90 bp TTTCGTCTCTTCCAAAATGGACGACGTCGTGTTTTCTTCTGTGCCTaGTGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTG +
Preference number: 1 (lower is better)
Translates to: FRLFQNGRRRVFFCA*WAHVRAALNFTLKV
Trigger: CACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCACAGAAGAAAACACGACGTCGTCCATTTTGGAAGAGACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 90 bp GAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTaGACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGC +
Preference number: 1 (lower is better)
Translates to: EFLMDFSFCCTANIS*TLSGLVEYLHPLDS
Trigger: GCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR TCA 90 bp CAACCTCTCACAGGAGCAGTGAACGGGGCTTTCCTTGCTACACACTaGCTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTGATATTT +
Preference number: 1 (lower is better)
Translates to: QPLTGAVNGAFLATH*LEAHLCMEEFSVIF
Trigger: AAATATCACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTCACTGCTCCTGTGAGAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 90 bp TTTCTTTCGTCTCTTCCAAAATGGACGACGTCGTGTTTTCTTCTGTaGCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAA +
Preference number: 1 (lower is better)
Translates to: FLSSLPKWTTSCFLL*LMGTCPCCLEFHSE
Trigger: TTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCACAGAAGAAAACACGACGTCGTCCATTTTGGAAGAGACGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTaGCTGAATGCAGAGCTCAAACACACAAACTGGGTAAAGGTAGTA +
Preference number: 1 (lower is better)
Translates to: RAQESVTVQTLECCS*LNAELKHTNWVKVV
Trigger: TACTACCTTTACCCAGTTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR GCA 90 bp TTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTaGAGCTGCCTGAATGCAGAGCTCAAACACACAAACTGGGTAAAG +
Preference number: 1 (lower is better)
Translates to: LSRAQESVTVQTLEC*SCLNAELKHTNWVK
Trigger: CTTTACCCAGTTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR CCA 90 bp TTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTaGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAAAAGAG +
Preference number: 1 (lower is better)
Translates to: FLFVALRTFRAHSAG*WNTYTLLTARNRKE
Trigger: CTCTTTTCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR TCA 90 bp CCTATTAGAACGTGTCAGGCTGTGAATGGACTAGCCTGCCTTCTGTaGGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAA +
Preference number: 1 (lower is better)
Translates to: PIRTCQAVNGLACLL*DCLLCDCKMYRNQK
Trigger: TTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACAGAAGGCAGGCTAGTCCATTCACAGCCTGACACGTTCTAATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 90 bp AGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATaGAGAGCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAG +
Preference number: 1 (lower is better)
Translates to: RISDSSNTGMLQLPE*RAQTHKLGKGSRKK
Trigger: CTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR CCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTCTGCAGGGGACTGTGTaGGCCAGTCCTGCAAACCCA +
Preference number: 2 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARLQGTV*ASPANP
Trigger: TGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAG...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGAAGAGGGCTGCCACCTaGAGGGGACTGTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLKRAAT*RGLCGP
Trigger: TGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTT...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAAGAGGGCTGCCACCTaGAGGGGACTGTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARKRAAT*RGLCGP
Trigger: TGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTT...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR-3UTR GCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTATGTGGCTGGGGACATaGACGATGGAGAAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARMWLGT*TMEKVR
Trigger: TCTCACCTTCTCCATCGTGCATGTCCCCAGCCACAT...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGCACACTCAGCGGGCTaGTGGAATACTTACACCCTC +
Preference number: 2 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHAHSAG*WNTYTL
Trigger: GAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGAACGGGGCTTTCCTTaGTACACACTGACTAGAAGC +
Preference number: 2 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARERGFP*YTLTRS
Trigger: GCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTGCAGGGGACTGTGTaGGCCAGTCCTGCAAACCCA +
Preference number: 2 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARLQGTV*ASPANP
Trigger: TGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR-3UTR TCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCGCACGATGGAGAAGGTaGGAGGCGGTGATACCAAGT +
Preference number: 2 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVARWRR*EAVIPS
Trigger: ACTTGGTATCACCGCCTCTCACCTTCTCCATCGTGC...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCACCTACCAGAGCCTTCTaGCAGGCCTTGAACTCTCCC +
Preference number: 2 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESPTRAF*QALNSP
Trigger: GGGAGAGTTCAAGGCCTGTCAGAAGGCTCTGGTAGG...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCGTGAAGGGCATTCCCTaGTGGAGTCTCCTGGCCAGA +
Preference number: 2 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGVKGIP*WSLLAR
Trigger: TCTGGCCAGGAGACTCCAGCAGGGAATGCCCTTCAC...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAACTTTCACTTCCCATGTaGCTGGGGACATGCACGATG +
Preference number: 2 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQLSLPM*LGTCTM
Trigger: CATCGTGCATGTCCCCAGCCACATGGGAAGTGAAAG...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGAAGGGCATTCCCTGCTaGAGTCTCCTGGCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLKGIPC*SLLARG
Trigger: TCCTCTGGCCAGGAGACTCCAGCAGGGAATGCCCTT...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAAGGCCTGGGCCCTCTGTaGGCTACGCAGATACTGCTG +
Preference number: 2 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKGLGPL*ATQILL
Trigger: CAGCAGTATCTGCGTAGCCCACAGAGGGCCCAGGCC...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCACTCTCACAGGAGCAGTaGACGGGGCTTTCCTTGCTA +
Preference number: 2 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESLSQEQ*TGLSLL
Trigger: TAGCAAGGAAAGCCCCGTTCACTGCTCCTGTGAGAG...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCGTTTTCTTCTGTGCCTaGTGGGCACATGTCCGTGCT +
Preference number: 2 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVVFFCA*WAHVRA
Trigger: AGCACGGACATGTGCCCATCAGGCACAGAAGAAAAC...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACCCTGCAAACCCAACATaGCATGGTTTATGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHPANPT*HGLWSL
Trigger: AAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGG...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGATGTGTGGGCCAGTCCTaGAAACCCAACATGCCATGG +
Preference number: 2 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRCVGQS*KPNMPW
Trigger: CCATGGCATGTTGGGTTTGCAGGACTGGCCCACACA...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR-3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATAAGAGGGCTGCCACCTaGAGGGGACTGTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: RAQESVTVQTLECCSCLNKRAAT*RGLCGP
Trigger: TGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTT...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCACAACCCCTCCCCTCTaGGACAGCAGATGGGCACGT +
Preference number: 2 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGITTPPL*DSRWAR
Trigger: ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGT...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR TCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCCTACCAGAGCCTTCTaGCAGGCCTTGAACTCTCCC +
Preference number: 2 (lower is better)
Translates to: RAQESVTVQTLECCSCLNPTRAF*QALNSP
Trigger: GGGAGAGTTCAAGGCCTGTCAGAAGGCTCTGGTAGG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCTCCAACCACTCTCTCTaGAGAGCAATGAGCGTTATC +
Preference number: 2 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVSNHSL*RAMSVI
Trigger: GATAACGCTCATTGCTCTTCAGAGAGAGTGGTTGGA...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR TCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAATGTTGCAGCTGCCTaGATGCAGAGCTCAAACACA +
Preference number: 2 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVNVAAA*MQSSNT
Trigger: TGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATT...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR GCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCAAGAGGGCTGCCACCTaGAGGGGACTGTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: DGEFLMDFSFCCTANISCKRAAT*RGLCGP
Trigger: TGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTT...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR-3UTR GCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAAACTGCGAACATTTCGTaGACACTCAGCGGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKTANIS*TLSGLV
Trigger: CACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGT...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGACCTGCTGGAGTCTCCTaGCCAGAGGAAGGCCTACCA +
Preference number: 2 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRPAGVS*PEEGLP
Trigger: TGGTAGGCCTTCCTCTGGCCAGGAGACTCCAGCAGG...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACGCACGATGGAGAAGGTaGGAGGCGGTGATACCAAGT +
Preference number: 2 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHARWRR*EAVIPS
Trigger: ACTTGGTATCACCGCCTCTCACCTTCTCCATCGTGC...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTTCCTTGCTACACACTaGCTAGAAGCACACCTGTGT +
Preference number: 2 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLFLATH*LEAHLC
Trigger: ACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGAACATTTCCACTGGCTaGAGAGGTCGGTTCCCCATC +
Preference number: 2 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWNISTG*RGRFPI
Trigger: GATGGGGAACCGACCTCTTCAGCCAGTGGAAATGTT...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGAACATTTCCACTGGCTaGAGAGGTCGGTTCCCCATC +
Preference number: 2 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVNISTG*RGRFPI
Trigger: GATGGGGAACCGACCTCTTCAGCCAGTGGAAATGTT...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACCACTCAGCGGGCTGGTaGAATACTTACACCCTCTTG +
Preference number: 2 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHHSAGW*NTYTLL
Trigger: CAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTG...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACGCACACTCAGCGGGCTaGTGGAATACTTACACCCTC +
Preference number: 2 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHAHSAG*WNTYTL
Trigger: GAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGATTTTTCTTTTTGTTaGACTGCGAACATTTCGTGC +
Preference number: 2 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHDFSFC*TANISC
Trigger: GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATC...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTGGGGTTGCCCAGACTaGAGTGACAACTGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: KHQILMQNGALDRSWVLLWGCPD*SDNWGS
Trigger: GGAGCCCCAGTTGTCACTGCAGTCTGGGCAACCCCA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRTCHGL*SLHSQV
Trigger: AACCTGGGAATGAAGGCTCCATAAACCATGGCATGT...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARTCHGL*SLHSQV
Trigger: AACCTGGGAATGAAGGCTCCATAAACCATGGCATGT...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR-3UTR CCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCCACTCAGCGGGCTGGTaGAATACTTACACCCTCTTG +
Preference number: 2 (lower is better)
Translates to: KGGHREGAEEKHKRFHIAHSAGW*NTYTLL
Trigger: CAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTG...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGCACTTCCCATGTGGCTaGGGACATGCACGATGGAGA +
Preference number: 2 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEHFPCG*GHARWR
Trigger: TCTCCATCGTGCATGTCCCCAGCCACATGGGAAGTG...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCCTTTCACTTCCCATGTaGCTGGGGACATGCACGATG +
Preference number: 2 (lower is better)
Translates to: KGGHREGAEEKHKRFHIALSLPM*LGTCTM
Trigger: CATCGTGCATGTCCCCAGCCACATGGGAAGTGAAAG...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCATACTTACACCCTCTTaGCAGCGAGAAACAGAAAAG +
Preference number: 2 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGILTPS*QRETEK
Trigger: CTTTTCTGTTTCTCGCTGTCAAGAGGGTGTAAGTAT...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCTTGGCTTCTCCCATCTaGCTTCCCTTCTCAGCTTTC +
Preference number: 2 (lower is better)
Translates to: KGGHREGAEEKHKRFHIALASPI*LPFSAF
Trigger: GAAAGCTGAGAAGGGAAGGCAGATGGGAGAAGCCAA...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAACTTTCACTTCCCATGTaGCTGGGGACATGCACGATG +
Preference number: 2 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQLSLPM*LGTCTM
Trigger: CATCGTGCATGTCCCCAGCCACATGGGAAGTGAAAG...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCTCTCACAGGAGCAGTaGACGGGGCTTTCCTTGCTA +
Preference number: 2 (lower is better)
Translates to: KHQILMQNGALDRSWVLLLSQEQ*TGLSLL
Trigger: TAGCAAGGAAAGCCCCGTTCACTGCTCCTGTGAGAG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTGTGTGGGCCAGTCCTaGAAACCCAACATGCCATGG +
Preference number: 2 (lower is better)
Translates to: KHQILMQNGALDRSWVLLCVGQS*KPNMPW
Trigger: CCATGGCATGTTGGGTTTGCAGGACTGGCCCACACA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGACTGCGAACATTTCGTaGACACTCAGCGGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: KHQILMQNGALDRSWVLLTANIS*TLSGLV
Trigger: CACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGT...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGGAACGGGGCTTTCCTTaGTACACACTGACTAGAAGC +
Preference number: 2 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEERGFP*YTLTRS
Trigger: GCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTC...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTGCACACTCAGCGGGCTaGTGGAATACTTACACCCTC +
Preference number: 2 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCAHSAG*WNTYTL
Trigger: GAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCATGCTGTTGCTTCTTaGGGAGATGTGATGTTGCAC +
Preference number: 2 (lower is better)
Translates to: RAQESVTVQTLECCSCLNHAVAS*GDVMLH
Trigger: GTGCAACATCACATCTCCCCAAGAAGCAACAGCATG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CAA 90 bp CTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATTCTTAAAGGCGTGATTCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: LNFTPIRICSILCLA*QCCDLILKGVIPAE
Trigger: TTCAGCTGGAATCACGCCTTTAAGAATCAGATCACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
3UTR-3UTR TCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATCCTACCAGAGCCTTCTaGCAGGCCTTGAACTCTCCC +
Preference number: 2 (lower is better)
Translates to: RVRKHSKHQILMQNGALDPTRAF*QALNSP
Trigger: GGGAGAGTTCAAGGCCTGTCAGAAGGCTCTGGTAGG...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: RAQESVTVQTLECCSCLNTCHGL*SLHSQV
Trigger: AACCTGGGAATGAAGGCTCCATAAACCATGGCATGT...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHTCHGL*SLHSQV
Trigger: AACCTGGGAATGAAGGCTCCATAAACCATGGCATGT...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCGTTTCATATTGCCATTaGGTAGGGGGCTTCACCTTT +
Preference number: 2 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIVSYCH*VGGFTF
Trigger: AAAGGTGAAGCCCCCTACCCAATGGCAATATGAAAC...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR CAA 90 bp TGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTaGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCAC +
Preference number: 2 (lower is better)
Translates to: CLLCDCKMYRNQKRN*KSYSSLPASPAQHH
Trigger: GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTTCTTTTTGTTGCACTaGGAACATTTCGTGCACACT +
Preference number: 2 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHFFLLH*EHFVHT
Trigger: AGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCTCCTGGATGTGCTTTaGTCTACAGCTGTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: KHQILMQNGALDRSWVLLLLDVL*STAVFQ
Trigger: CTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR CCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGAAACCCAACATGCCATaGTTTATGGAGCCTTCATTC +
Preference number: 2 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWKPNMP*FMEPSF
Trigger: GAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCACTAGCATACAGCATTaGGTAAAAGAAGGGATGGAG +
Preference number: 2 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGITSIQH*VKEGME
Trigger: CTCCATCCCTTCTTTTACCCAATGCTGTATGCTAGT...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR TCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGATACTTACACCCTCTTaGCAGCGAGAAACAGAAAAG +
Preference number: 2 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLILTPS*QRETEK
Trigger: CTTTTCTGTTTCTCGCTGTCAAGAGGGTGTAAGTAT...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCCTGCAAACCCAACATaGCATGGTTTATGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: KHQILMQNGALDRSWVLLPANPT*HGLWSL
Trigger: AAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGGATTTTTCTTTTTGTTaGACTGCGAACATTTCGTGC +
Preference number: 2 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGDFSFC*TANISC
Trigger: GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATC...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTATGTGGCTGGGGACATaGACGATGGAGAAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: CETACCATVKCTGIKNVIMWLGT*TMEKVR
Trigger: TCTCACCTTCTCCATCGTGCATGTCCCCAGCCACAT...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCAAACACTGGAATGTTaGAGCTGCCTGAATGCAGAG +
Preference number: 2 (lower is better)
Translates to: KHQILMQNGALDRSWVLLQTLEC*SCLNAE
Trigger: CTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR TCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCCCTTCTGACAGGCCTTaGACTCTCCCTTATGGAACA +
Preference number: 2 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSPSDRP*TLPYGT
Trigger: TGTTCCATAAGGGAGAGTTCAAGGCCTGTCAGAAGG...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCCCTGCAAACCCAACATaGCATGGTTTATGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSPANPT*HGLWSL
Trigger: AAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGG...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTCGTCTCTTCCAAAATaGACGACGTCGTGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: KHQILMQNGALDRSWVLLSSLPK*TTSCFL
Trigger: AAGAAAACACGACGTCGTCCATTTTGGAAGAGACGA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR GCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCGATTTTTCTTTTTGTTaGACTGCGAACATTTCGTGC +
Preference number: 2 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSDFSFC*TANISC
Trigger: GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATC...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 72 bp TGGGGCTCGAGCACCTACAGAGTGAAGGGCATTCCCTaGTGGAGTCTCCTGGCCAGAGGAAGGCCTACCAGA +
Preference number: 3 (lower is better)
Translates to: WGSSTYRVKGIP*WSLLARGRPTR
Trigger: TCTGGTAGGCCTTCCTCTGGCCAGGAGACTCCAGCAGGGAATGCCCTTCACTCTGTAGGTGCTCGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 72 bp GGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCTaGAAACCCAACATGCCATGGTTTATGGAGCCTTCA +
Preference number: 3 (lower is better)
Translates to: GLPPAGDCVGQS*KPNMPWFMEPS
Trigger: TGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR TCA 72 bp ACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTaGAGGGCATTCCCTGCTGGAGTCTCCTGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: TVSSIGARAPTE*RAFPAGVSWPE
Trigger: CTCTGGCCAGGAGACTCCAGCAGGGAATGCCCTTCACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CCA 72 bp TGGGGTTGCCCAGACTGCAGTGACAACTGGGGCTCCTaGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: WGCPDCSDNWGS*MCFALQLSSSS
Trigger: AGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCCCAGTTGTCACTGCAGTCTGGGCAACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR GCA 72 bp CCTTCTCAGCTTTCACTTCCCATGTGGCTGGGGACATaGACGATGGAGAAGGTGAGAGGCGGTGATACCAAG +
Preference number: 3 (lower is better)
Translates to: PSQLSLPMWLGT*TMEKVRGGDTK
Trigger: CTTGGTATCACCGCCTCTCACCTTCTCCATCGTGCATGTCCCCAGCCACATGGGAAGTGAAAGCTGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR TCA 72 bp GCCTTGAACTCTCCCTTATGGAACATTTCCACTGGCTaGAGAGGTCGGTTCCCCATCCTGTCACCACCAACC +
Preference number: 3 (lower is better)
Translates to: ALNSPLWNISTG*RGRFPILSPPT
Trigger: GGTTGGTGGTGACAGGATGGGGAACCGACCTCTTCAGCCAGTGGAAATGTTCCATAAGGGAGAGTTCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CCA 72 bp ACAGGCCTTGAACTCTCCCTTATGGAACATTTCCACTaGCTGAAGAGGTCGGTTCCCCATCCTGTCACCACC +
Preference number: 3 (lower is better)
Translates to: TGLELSLMEHFH*LKRSVPHPVTT
Trigger: GGTGGTGACAGGATGGGGAACCGACCTCTTCAGCCAGTGGAAATGTTCCATAAGGGAGAGTTCAAGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR TCA 72 bp CCAGAGGAAGGCCTACCAGAGCCTTCTGACAGGCCTTaGACTCTCCCTTATGGAACATTTCCACTGGCTGAA +
Preference number: 3 (lower is better)
Translates to: PEEGLPEPSDRP*TLPYGTFPLAE
Trigger: TTCAGCCAGTGGAAATGTTCCATAAGGGAGAGTTCAAGGCCTGTCAGAAGGCTCTGGTAGGCCTTCCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 72 bp CCAACCTCTCACAGGAGCAGTGAACGGGGCTTTCCTTaGTACACACTGACTAGAAGCACACCTGTGTATGGA +
Preference number: 3 (lower is better)
Translates to: PTSHRSSERGFP*YTLTRSTPVYG
Trigger: TCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTCACTGCTCCTGTGAGAGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 72 bp ATTATAAGGCTGACCATTGGAGGGGACAAGCTGAGCTaGATGCCTATAGTAGGACTCTGCCTGGCTGGTCTG +
Preference number: 3 (lower is better)
Translates to: IIRLTIGGDKLS*MPIVGLCLAGL
Trigger: CAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
3UTR CCA 72 bp GACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATaGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTT +
Preference number: 3 (lower is better)
Translates to: DCVGQSCKPNMP*FMEPSFPGCHF
Trigger: AAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR CCA 72 bp GCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTaGAATACTTACACCCTCTTGACAGCGAGAAACAGA +
Preference number: 3 (lower is better)
Translates to: ALRTFRAHSAGW*NTYTLLTARNR
Trigger: TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR CCA 72 bp GTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTaGTGGAATACTTACACCCTCTTGACAGCGAGAAAC +
Preference number: 3 (lower is better)
Translates to: VALRTFRAHSAG*WNTYTLLTARN
Trigger: GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR CCA 72 bp GCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: AELHAYSRTLPG*SGFCIELDPIF
Trigger: GAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
3UTR-3UTR CAA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGCCATGCTGTTGCTTCTaGGGGAGATGTGATGTTGCA +
Preference number: 3 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLPCCCF*GRCDVA
Trigger: TGCAACATCACATCTCCCCAAGAAGCAACAGCATGG...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CAA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGATGGATTTTTCTTTTaGTTGCACTGCGAACATTTC +
Preference number: 3 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARDGFFF*LHCEHF
Trigger: GAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR TCA 72 bp ACGTGTCAGGCTGTGAATGGACTAGCCTGCCTTCTGTaGGACTGCTTGCTGTGCGACTGTAAAATGTACAGG +
Preference number: 3 (lower is better)
Translates to: TCQAVNGLACLL*DCLLCDCKMYR
Trigger: CCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACAGAAGGCAGGCTAGTCCATTCACAGCCTGACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CCA 72 bp TGGGCCCCAACTGCTGGACCCCATGCTGTTGCTTCTTaGGGAGATGTGATGTTGCACACATTAGGAATAAAA +
Preference number: 3 (lower is better)
Translates to: WAPTAGPHAVAS*GDVMLHTLGIK
Trigger: TTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGTTGGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CAA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCGGTTTCATATTGCCATaGGGTAGGGGGCTTCACCTT +
Preference number: 3 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIGFILP*GRGLHL
Trigger: AAGGTGAAGCCCCCTACCCAATGGCAATATGAAACC...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR TCA 72 bp ACAGGAGCAGTGAACGGGGCTTTCCTTGCTACACACTaGCTAGAAGCACACCTGTGTATGGAAGAATTCAGT +
Preference number: 3 (lower is better)
Translates to: TGAVNGAFLATH*LEAHLCMEEFS
Trigger: ACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTCACTGCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR TCA 72 bp TTCCAAAATGGACGACGTCGTGTTTTCTTCTGTGCCTaGTGGGCACATGTCCGTGCTGCCTTGAATTTCACT +
Preference number: 3 (lower is better)
Translates to: FQNGRRRVFFCA*WAHVRAALNFT
Trigger: AGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCACAGAAGAAAACACGACGTCGTCCATTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR GCA 72 bp TCTCTTCCAAAATGGACGACGTCGTGTTTTCTTCTGTaGCTGATGGGCACATGTCCGTGCTGCCTTGAATTT +
Preference number: 3 (lower is better)
Translates to: SLPKWTTSCFLL*LMGTCPCCLEF
Trigger: AAATTCAAGGCAGCACGGACATGTGCCCATCAGGCACAGAAGAAAACACGACGTCGTCCATTTTGGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CCA 72 bp TGCAGCTGCCTGAATGCAGAGCTCAAACACACAAACTaGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: CSCLNAELKHTN*VKVVGKRLGKR
Trigger: CCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR CAA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGATGGATTTTTCTTTTaGTTGCACTGCGAACATTTC +
Preference number: 3 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESDGFFF*LHCEHF
Trigger: GAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR TCA 72 bp CCACTAGCTGCCTCTAGGAACAGAGAAAGGTTTGCCTaGACTTCACTCCGATTCGGATTTGCTCGATTCTTT +
Preference number: 3 (lower is better)
Translates to: PLAASRNRERFA*TSLRFGFARFF
Trigger: AAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCCTAGAGGCAGCTAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
3UTR GCA 72 bp GCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTaGAGCTGCCTGAATGCAGAGCTCAAACACACAAAC +
Preference number: 3 (lower is better)
Translates to: AQESVTVQTLEC*SCLNAELKHTN
Trigger: GTTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR GCA 72 bp AGAAAGGTTTGCCTGAACTTCACTCCGATTCGGATTTaGTCGATTCTTTGCCTGGCCTTGCAGTGTTGTGAT +
Preference number: 3 (lower is better)
Translates to: RKVCLNFTPIRI*SILCLALQCCD
Trigger: ATCACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
3UTR-3UTR CAA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGACTGAGAAGTTCCCATaGGCTTCTCCCATCTGCCTT +
Preference number: 3 (lower is better)
Translates to: KHQILMQNGALDRSWVLLTEKFP*ASPICL
Trigger: AAGGCAGATGGGAGAAGCCAATGGGAACTTCTCAGT...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CAA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGTTTCATATTGCCATaGGGTAGGGGGCTTCACCTT +
Preference number: 3 (lower is better)
Translates to: KHQILMQNGALDRSWVLLGFILP*GRGLHL
Trigger: AAGGTGAAGCCCCCTACCCAATGGCAATATGAAACC...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR CAA 90 bp CCCAATTGGGAAGACTTCACACGGCATGGTAAATCTACATTAAATACTGTACACCACTCCGATTCGGATTaGCTCGATTCTTTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: PNWEDFTRHGKSTLNTVHHSDSD*LDSLPG
Trigger: GCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTG...GTGTACAGTATTTAATGTAGATTTACCATGCCGTGTGAAGTCTTCCCAATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
3UTR GCA 72 bp ATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTaGACACTCAGCGGGCTGGTGGAATACTTACACCCT +
Preference number: 3 (lower is better)
Translates to: MDFSFCCTANIS*TLSGLVEYLHP
Trigger: AGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
3UTR GCA 72 bp GACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATaGAGAGCTCAAACACACAAACTGGGTAAAGGTAGT +
Preference number: 3 (lower is better)
Translates to: DSSNTGMLQLPE*RAQTHKLGKGS
Trigger: ACTACCTTTACCCAGTTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGATGGATTTTTCTTTTaGTTGCACTGCGAACATTTC +
Preference number: 3 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHDGFFF*LHCEHF
Trigger: GAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR-3UTR CAA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATGGATTTTTCTTTTTGTaGCACTGCGAACATTTCGTG +
Preference number: 3 (lower is better)
Translates to: RVRKHSKHQILMQNGALDGFFFL*HCEHFV
Trigger: CACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTCCCGCGAAGCCTCCGTaGGTCTCTCAGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARPAKPP*VSQAPR
Trigger: CCGAGGAGCCTGAGAGACCCACGGAGGCTTCGCGGG...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTAGGTACTGCGCGCTCTaGAGGCTCATCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARRYCAL*RLILRR
Trigger: GCGGCGGAGGATGAGCCTGCAGAGCGCGCAGTACCT...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGCCTGCCGGAGGTACTaGGCGCTCTGCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARACRRY*ALCRLI
Trigger: GATGAGCCTGCAGAGCGCGCAGTACCTCCGGCAGGC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTAGCTGCTCTCGCTGCTaGTCTGGCCCGTGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: RGQAELHAYSRTLPGWSGSCSRC*SGPWGA
Trigger: TGCGCCCCACGGGCCAGAGCAGCAGCGAGAGCAGCT...ACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAACCCGCGAAGCCTCCGTaGGTCTCTCAGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQPAKPP*VSQAPR
Trigger: CCGAGGAGCCTGAGAGACCCACGGAGGCTTCGCGGG...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCGGCCTGGGCCCTCTGTaGGCTACGCAGATACTGCTG +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSGLGPL*ATQILL
Trigger: CAGCAGTATCTGCGTAGCCCACAGAGGGCCCAGGCC...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTACGGAAGACTCCTGGTaGCCGTTTGCCCCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCTEDSW*PFAPAV
Trigger: GACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGT...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACACGGAAGACTCCTGGTaGCCGTTTGCCCCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHTEDSW*PFAPAV
Trigger: GACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGAGGTACTGCGCGCTCTaGAGGCTCATCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HWRGQAELHAYSRTLPGWRYCAL*RLILRR
Trigger: GCGGCGGAGGATGAGCCTGCAGAGCGCGCAGTACCT...CCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTAAGAGGGCTGCCACCTaGAGGGGACTGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCKRAAT*RGLCGP
Trigger: TGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTT...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCTGGGGTTGCCCAGACTaGAGTGACAACTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSWGCPD*SDNWGS
Trigger: GGAGCCCCAGTTGTCACTGCAGTCTGGGCAACCCCA...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCCCGCGAAGCCTCCGTaGGTCTCTCAGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: IGGDKLSCMPIVGLCLAGPAKPP*VSQAPR
Trigger: CCGAGGAGCCTGAGAGACCCACGGAGGCTTCGCGGG...ACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTAGGTCCCTGGTTCATTaGCCCTGGTCCAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCRSLVH*PWSRGP
Trigger: CGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCT...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCCTGCAGGGGACTGTGTaGGCCAGTCCTGCAAACCCA +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSLQGTV*ASPANP
Trigger: TGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAG...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTTGCTGCTCTGGCCCGTaGGGCGCAGGGACACTCCGA +
Preference number: 4 (lower is better)
Translates to: ADHWRGQAELHAYSRTLPCCSGP*GAGTLR
Trigger: TCGGAGTGTCCCTGCGCCCCACGGGCCAGAGCAGCA...AGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR TCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCACGGAAGACTCCTGGTaGCCGTTTGCCCCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSTEDSW*PFAPAV
Trigger: GACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGT...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCCGAGCACCTACAGAGTaGAGGGCATTCCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSRAPTE*RAFPAG
Trigger: TCCAGCAGGGAATGCCCTTCACTCTGTAGGTGCTCG...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTTTGCCCAGACTGCAGTaGCAACTGGGGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARLPRLQ*QLGLLD
Trigger: ATCCAGGAGCCCCAGTTGTCACTGCAGTCTGGGCAA...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGCCTGCCGGAGGTACTaGGCGCTCTGCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: ADHWRGQAELHAYSRTLPACRRY*ALCRLI
Trigger: GATGAGCCTGCAGAGCGCGCAGTACCTCCGGCAGGC...AGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCAGGTGCCACTCGGAGTaGTGGCCTGATGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGRCHSE*WPDANC
Trigger: GCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCT...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGCCCGCGAAGCCTCCGTaGGTCTCTCAGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEPAKPP*VSQAPR
Trigger: CCGAGGAGCCTGAGAGACCCACGGAGGCTTCGCGGG...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTGGGGGCGGAAACCCTaGCCTGCTGGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNWGRKP*PAGKRR
Trigger: CCTCCTCTTCCCAGCAGGCCAGGGTTTCCGCCCCCA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAGCTGGGCAGGGGCCTaGGCCCTCTGTGGGCTACGC +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHSWAGA*ALCGLR
Trigger: GCGTAGCCCACAGAGGGCCCAGGCCCCTGCCCAGCT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAAGCTGGGCAGGGGCCTaGGCCCTCTGTGGGCTACGC +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTSWAGA*ALCGLR
Trigger: GCGTAGCCCACAGAGGGCCCAGGCCCCTGCCCAGCT...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTTGGAATCCAGAGTGGTaGGGCGGGCTTTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARWNPEW*GGLFPK
Trigger: TTTGGGGAAAAGCCCGCCTCACCACTCTGGATTCCA...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTCGAGCACCTACAGAGTaGAGGGCATTCCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCRAPTE*RAFPAG
Trigger: TCCAGCAGGGAATGCCCTTCACTCTGTAGGTGCTCG...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGCCTGCCGGAGGTACTaGGCGCTCTGCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEACRRY*ALCRLI
Trigger: GATGAGCCTGCAGAGCGCGCAGTACCTCCGGCAGGC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000515829.6
CDS-3UTR GCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTGACATTCGGAGGTACTaGGCGCTCTGCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCDIRRY*ALCRLI
Trigger: GATGAGCCTGCAGAGCGCGCAGTACCTCCGAATGTC...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367537.7
CDS-3UTR GCA 90 bp AGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCGAAAGCTGCTCTCGCTaGTGCTCTGGCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SCMPIVGLCLAGLVSVSSESCSR*CSGPWG
Trigger: GCCCCACGGGCCAGAGCAGCAGCGAGAGCAGCTTTC...GCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGCCTGCAGAGCCTGCCTaGATGTCCAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVPAEPA*MSRLQL
Trigger: CAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGG...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCGCAATGTCTCCAAGGTaGACGAGGCAGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGAMSPR*TRQCWQ
Trigger: CTGCCAGCACTGCCTCGTCCACCTTGGAGACATTGC...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGGGGGCGGAAACCCTaGCCTGCTGGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGWGRKP*PAGKRR
Trigger: CCTCCTCTTCCCAGCAGGCCAGGGTTTCCGCCCCCA...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAACTGGTTCATTGGCCCTaGTCCAGAGGGCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQLVHWP*SRGPLL
Trigger: CAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAG...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTCACTTCCCATGTGGCTaGGGACATGCACGATGGAGA +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARHFPCG*GHARWR
Trigger: TCTCCATCGTGCATGTCCCCAGCCACATGGGAAGTG...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGAGCTGGGCAGGGGCCTaGGCCCTCTGTGGGCTACGC +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVSWAGA*ALCGLR
Trigger: GCGTAGCCCACAGAGGGCCCAGGCCCCTGCCCAGCT...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCAACTGATTATAAGGCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATCTCTCGCTGCTGCTCTaGCCCGTGGGGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PTDYKADHWRGQAELHAYLSLLL*PVGRRD
Trigger: GTCCCTGCGCCCCACGGGCCAGAGCAGCAGCGAGAG...ATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATAATCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp GGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGACTATGCTGGTGACCTaGAGCCGGCCCACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GGDKLSCMPIVGLCLAGLTMLVT*SRPTRR
Trigger: CCTTCTTGTGGGCCGGCTCCAGGTCACCAGCATAGT...CAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR TCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTAGTCCATGGAGACCTTaGCTGCTGGAAGAGGATAGG +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARSPWRP*LLEEDR
Trigger: CCTATCCTCTTCCAGCAGTCAAGGTCTCCATGGACT...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACTGGAATCCAGAGTGGTaGGGCGGGCTTTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHWNPEW*GGLFPK
Trigger: TTTGGGGAAAAGCCCGCCTCACCACTCTGGATTCCA...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAGCGGAAACCCTGGCCTaGTGGGAAGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARAETLA*WEEEGR
Trigger: CCTTCCCTCCTCTTCCCAGCAGGCCAGGGTTTCCGC...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTGCGGAAACCCTGGCCTaGTGGGAAGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGAETLA*WEEEGR
Trigger: CCTTCCCTCCTCTTCCCAGCAGGCCAGGGTTTCCGC...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGCGGAAACCCTGGCCTaGTGGGAAGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESAETLA*WEEEGR
Trigger: CCTTCCCTCCTCTTCCCAGCAGGCCAGGGTTTCCGC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCGTGCCTTGTCCCCGTTaGTGTTTCTGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGVPCPR*CFCFCC
Trigger: GCAGCAGAAGCAGAAACAGCAACGGGGACAAGGCAC...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCTGTGTGGGCCAGTCCTaGAAACCCAACATGCCATGG +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGCVGQS*KPNMPW
Trigger: CCATGGCATGTTGGGTTTGCAGGACTGGCCCACACA...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCAAGAGGGCTGCCACCTaGAGGGGACTGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGKRAAT*RGLCGP
Trigger: TGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTT...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGTGAAGGGCATTCCCTaGTGGAGTCTCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQVKGIP*WSLLAR
Trigger: TCTGGCCAGGAGACTCCAGCAGGGAATGCCCTTCAC...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTGGGGTTGCCCAGACTaGAGTGACAACTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNWGCPD*SDNWGS
Trigger: GGAGCCCCAGTTGTCACTGCAGTCTGGGCAACCCCA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTGCAGTGTCCCGCGAAGCCTCCGTaGGTCTCTCAGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LNFTPIRICSILCLALQCPAKPP*VSQAPR
Trigger: CCGAGGAGCCTGAGAGACCCACGGAGGCTTCGCGGG...ACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCCTGGTTCATTGGCCCTaGTCCAGAGGGCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVLVHWP*SRGPLL
Trigger: CAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAG...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAAGGTCCCTGGTTCATTaGCCCTGGTCCAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRRSLVH*PWSRGP
Trigger: CGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCT...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTTACAGAGATGTTTCCTaGGGGGCCATTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARYRDVS*GAIEGL
Trigger: CAGTCCCTCAATGGCCCCCCAGGAAACATCTCTGTA...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCCCAGGTTGCCACTTTaGCCTCAGTGTGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSPRLPL*PQCGGF
Trigger: GAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGG...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTGCACACTCAGCGGGCTaGTGGAATACTTACACCCTC +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCAHSAG*WNTYTL
Trigger: GAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCCTTTCACTTCCCATGTaGCTGGGGACATGCACGATG +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSLSLPM*LGTCTM
Trigger: CATCGTGCATGTCCCCAGCCACATGGGAAGTGAAAG...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCGTGTCAGGCTGTGAATaGACTAGCCTGCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSVSGCE*TSLPSV
Trigger: CACAGAAGGCAGGCTAGTCCATTCACAGCCTGACAC...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAATTGGGCCCCAACTGCTaGACCCCATGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQLGPNC*TPCCCF
Trigger: GAAGCAACAGCATGGGGTCCAGCAGTTGGGGCCCAA...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTGGCCTGGGCCCTCTGTaGGCTACGCAGATACTGCTG +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGGLGPL*ATQILL
Trigger: CAGCAGTATCTGCGTAGCCCACAGAGGGCCCAGGCC...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGACAATGTCTCCAAGGTaGACGAGGCAGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GGDKLSCMPIVGLCLAGLTMSPR*TRQCWQ
Trigger: CTGCCAGCACTGCCTCGTCCACCTTGGAGACATTGT...CAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR TCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACACGGAAGACTCCTGGTaGCCGTTTGCCCCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHTEDSW*PFAPAV
Trigger: GACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGGGGCCATTGAGGGACTaGGTTCTGCTTTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRGPLRD*VLLWSW
Trigger: CCAGCTCCAAAGCAGAACTCAGTCCCTCAATGGCCC...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTCGGAGTGCTGGCCTaGTGCCAACTGCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARLGVLA*CQLLSE
Trigger: CTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCCCTACCAGAGCCTTCTaGCAGGCCTTGAACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVPTRAF*QALNSP
Trigger: GGGAGAGTTCAAGGCCTGTCAGAAGGCTCTGGTAGG...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp AGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTCAGGGCGCCTGTCCCTCAGTaGTTTCCGCCTCTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: RTLPGWSGFCIELDPIFRAPVPQ*FPPLCS
Trigger: GCTACAGAGAGGCGGAAATCACTGAGGGACAGGCGC...CCTGAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR TCA 90 bp GCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTTATGGACTATGCTGGTaGCCTGGAGCCGGCCCACAA +
Preference number: 4 (lower is better)
Translates to: ADHWRGQAELHAYSRTLPYGLCW*PGAGPQ
Trigger: TTGTGGGCCGGCTCCAGGTCACCAGCATAGTCCATA...AGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp TCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTGCAGTGTTGTGATCAGGTACTGCGCGCTCTaGAGGCTCATCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SLRFGFARFFAWPCSVVIRYCAL*RLILRR
Trigger: GCGGCGGAGGATGAGCCTGCAGAGCGCGCAGTACCT...GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGGCCTGCCGGAGGTACTaGGCGCTCTGCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWACRRY*ALCRLI
Trigger: GATGAGCCTGCAGAGCGCGCAGTACCTCCGGCAGGC...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAGGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCGCCTGCCGGAGGTACTaGGCGCTCTGCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: KVCLNFTPIRICSILCLAACRRY*ALCRLI
Trigger: GATGAGCCTGCAGAGCGCGCAGTACCTCCGGCAGGC...GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR GCA 90 bp CATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: HWRGQAELHAYSRTLPGWFWYRS*RACLDV
Trigger: GACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAA...CCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCCCCTGGGCTCCCATCTaGAGCCAGCGACTCTATCAC +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGPWAPI*SQRLYH
Trigger: GTGATAGAGTCGCTGGCTGCAGATGGGAGCCCAGGG...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGCCCTGGGCTCCCATCTaGAGCCAGCGACTCTATCAC +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEPWAPI*SQRLYH
Trigger: GTGATAGAGTCGCTGGCTGCAGATGGGAGCCCAGGG...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTTTGCACCTGGTTTCCTaGTGGAGAGTGAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCLHLVS*WRVSCR
Trigger: CCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAA...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTCCTGGTGACCGTTTaGCCCTGCGGTCTATGTTTG +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSLLVTV*PCGLCL
Trigger: CAAACATAGACCGCAGGGGCAAACGGTCACCAGGAG...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGGCAGAAGGTCCAGGATaGATCATGGAACTGGACCAG +
Preference number: 4 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVAEGPG*IMELDQ
Trigger: CTGGTCCAGTTCCATGATGCATCCTGGACCTTCTGC...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAAGAGGGCTGCCACCTaGAGGGGACTGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHKRAAT*RGLCGP
Trigger: TGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCACTGCGAACATTTCGTaGACACTCAGCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSTANIS*TLSGLV
Trigger: CACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGT...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTTCGTGTTTTCTTCTGTaGCTGATGGGCACATGTCCG +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARSCFLL*LMGTCP
Trigger: CGGACATGTGCCCATCAGGCACAGAAGAAAACACGA...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGGGGTTGCCCAGACTaGAGTGACAACTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGWGCPD*SDNWGS
Trigger: GGAGCCCCAGTTGTCACTGCAGTCTGGGCAACCCCA...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGTGGGGGCGGAAACCCTaGCCTGCTGGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVWGRKP*PAGKRR
Trigger: CCTCCTCTTCCCAGCAGGCCAGGGTTTCCGCCCCCA...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTCTGGTTCATTGGCCCTaGTCCAGAGGGCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGLVHWP*SRGPLL
Trigger: CAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAG...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAGGTCCCTGGTTCATTaGCCCTGGTCCAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHRSLVH*PWSRGP
Trigger: CGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATAGGTCCCTGGTTCATTaGCCCTGGTCCAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHRSLVH*PWSRGP
Trigger: CGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCT...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCCTGCAGGGGACTGTGTaGGCCAGTCCTGCAAACCCA +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGLQGTV*ASPANP
Trigger: TGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAG...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTCTGCAGGGGACTGTGTaGGCCAGTCCTGCAAACCCA +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGLQGTV*ASPANP
Trigger: TGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAG...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGACTGCAGGGGACTGTGTaGGCCAGTCCTGCAAACCCA +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRLQGTV*ASPANP
Trigger: TGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAG...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACCACTCAGCGGGCTGGTaGAATACTTACACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHHSAGW*NTYTLL
Trigger: CAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTG...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGACCTGCTGGAGTCTCCTaGCCAGAGGAAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRPAGVS*PEEGLP
Trigger: TGGTAGGCCTTCCTCTGGCCAGGAGACTCCAGCAGG...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTTGGGCCCCAACTGCTaGACCCCATGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNLGPNC*TPCCCF
Trigger: GAAGCAACAGCATGGGGTCCAGCAGTTGGGGCCCAA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCAGACTGTCTTTTaGGCCCCAACTGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSLQTVF*APTAGP
Trigger: GGGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAG...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGAGCTGGGCAGGGGCCTaGGCCCTCTGTGGGCTACGC +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLSWAGA*ALCGLR
Trigger: GCGTAGCCCACAGAGGGCCCAGGCCCCTGCCCAGCT...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACTGTCGCACTAATACTTaGGAGGTCCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHCRTNT*EVLFMG
Trigger: CCCCATGAAGAGGACCTCTCAAGTATTAGTGCGACA...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGACTGTGCTGTTGGCTaGGCTGGTAAAGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHDCAVG*AGKDVR
Trigger: CCTTACATCTTTACCAGCTCAGCCAACAGCACAGTC...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACAGGATGAATGTGACATaGGCTCTGAGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHRMNVT*ALRASP
Trigger: TGGAGAAGCCCTCAGAGCTCATGTCACATTCATCCT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGGGCCATTGAGGGACTaGGTTCTGCTTTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEGPLRD*VLLWSW
Trigger: CCAGCTCCAAAGCAGAACTCAGTCCCTCAATGGCCC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTTGCCCAGACTGCAGTaGCAACTGGGGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLLPRLQ*QLGLLD
Trigger: ATCCAGGAGCCCCAGTTGTCACTGCAGTCTGGGCAA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTAATGTTGCAGCTGCCTaGATGCAGAGCTCAAACACA +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARNVAAA*MQSSNT
Trigger: TGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATT...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGAGGTACTGCGCGCTCTaGAGGCTCATCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWRYCAL*RLILRR
Trigger: GCGGCGGAGGATGAGCCTGCAGAGCGCGCAGTACCT...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTGGGGACAAGCTGAGCTaGATGCCTATAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: RGQAELHAYSRTLPGWSGGDKLS*MPIVGL
Trigger: GAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCC...ACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAAGCGGAAACCCTGGCCTaGTGGGAAGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKAETLA*WEEEGR
Trigger: CCTTCCCTCCTCTTCCCAGCAGGCCAGGGTTTCCGC...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCAAAGATGTAAGGGGTTaGTGGGAAGGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSKDVRG*WEGGCD
Trigger: ATCACAGCCACCTTCCCAGCAACCCCTTACATCTTT...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGCTGGGTACAGGATCCTaGTCTGGACGGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRLGTGS*SGRKTP
Trigger: AGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAG...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTAGGTGCCACTCGGAGTaGTGGCCTGATGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIRCHSE*WPDANC
Trigger: GCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCT...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAGGTGCCACTCGGAGTaGTGGCCTGATGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHRCHSE*WPDANC
Trigger: GCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGGTGGAGGGTTCATGGTaGCTTGTCCCCGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRVEGSW*LVPVAV
Trigger: AACAGCAACGGGGACAAGGCACCATGAACCCTCCAC...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACACTGCGAACATTTCGTaGACACTCAGCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNTANIS*TLSGLV
Trigger: CACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGT...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACTTTCATTGCTGGGGTTaGCCAGACTGCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHFHCWG*PDCSDN
Trigger: GTTGTCACTGCAGTCTGGGCAACCCCAGCAATGAAA...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCCAAACACTGGAATGTTaGAGCTGCCTGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSQTLEC*SCLNAE
Trigger: CTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTG...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTCCTGCAGAGCCTGCCTaGATGTCCAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGPAEPA*MSRLQL
Trigger: CAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGG...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGACCTGCAGAGCCTGCCTaGATGTCCAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRPAEPA*MSRLQL
Trigger: CAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGG...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTCAGGCCTGCAGAGCCTGCCTaGATGTCCAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RTLPGWSGFCIELDPIFRPAEPA*MSRLQL
Trigger: CAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGG...CCTGAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARVTSIF*YRSCRA
Trigger: GGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTAC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGCTCGATTCTTTGCCTaGCCTTGCAGTGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: GGDKLSCMPIVGLCLAGLARFFA*PCSVVI
Trigger: GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGC...CAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATATGGGGGCGGAAACCCTaGCCTGCTGGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIWGRKP*PAGKRR
Trigger: CCTCCTCTTCCCAGCAGGCCAGGGTTTCCGCCCCCA...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACACTGGTTCATTGGCCCTaGTCCAGAGGGCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTLVHWP*SRGPLL
Trigger: CAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAG...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACAAACCCACCCATGGCTaGCTTATCAGTTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHKPTHG*LISFPP
Trigger: CGGTGGAAAACTGATAAGCCAGCCATGGGTGGGTTT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCATGGAAGGGCCATaGCCTGTCCAGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHSMEGP*PVQVPL
Trigger: GAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGA...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCCCCAGGTTGCCACTTTaGCCTCAGTGTGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGPRLPL*PQCGGF
Trigger: GAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGG...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCACTGTATCCTCGATTaGGGCTCGAGCACCTACAGA +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSHCILD*GSSTYR
Trigger: TCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTG...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGGCCTGGGCCCTCTGTaGGCTACGCAGATACTGCTG +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHGLGPL*ATQILL
Trigger: CAGCAGTATCTGCGTAGCCCACAGAGGGCCCAGGCC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAACAACCCCTCCCCTCTaGGACAGCAGATGGGCACGT +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTTTPPL*DSRWAR
Trigger: ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGT...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACAGAGAAAGGTTTGCCTaGACTTCACTCCGATTCGGA +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHRERFA*TSLRFG
Trigger: TCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCCCTGTAATACCCTGGTaGCCTTTGGAAAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSPVIPW*PLEKSK
Trigger: CTTGGATTTTTCCAAAGGTCACCAGGGTATTACAGG...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGGTGATGAATGGGGATaGACTGGGAGTTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHGDEWG*TGSYLL
Trigger: AAGCAAGTAACTCCCAGTTCATCCCCATTCATCACC...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTTGGGACCTTGACTTCTaGGGGATTATGGTTATATGG +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARWDLDF*GIMVIW
Trigger: CCATATAACCATAATCCCTCAGAAGTCAAGGTCCCA...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAAGGATGAATGTGACATaGGCTCTGAGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQRMNVT*ALRASP
Trigger: TGGAGAAGCCCTCAGAGCTCATGTCACATTCATCCT...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCTTTGGGTATCTTTCCTaGTTGAGAGAGAATCCGGTG +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSFGYLS*LRENPV
Trigger: CACCGGATTCTCTCTCAATCAGGAAAGATACCCAAA...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAGGGCCATTGAGGGACTaGGTTCTGCTTTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPGPLRD*VLLWSW
Trigger: CCAGCTCCAAAGCAGAACTCAGTCCCTCAATGGCCC...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGCTCGGAGTGCTGGCCTaGTGCCAACTGCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVLGVLA*CQLLSE
Trigger: CTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAG...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCTCGGAGTGCTGGCCTaGTGCCAACTGCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGLGVLA*CQLLSE
Trigger: CTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAGCACGATGGAGAAGGTaGGAGGCGGTGATACCAAGT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARARWRR*EAVIPS
Trigger: ACTTGGTATCACCGCCTCTCACCTTCTCCATCGTGC...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACTTCCTTGCTACACACTaGCTAGAAGCACACCTGTGT +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHFLATH*LEAHLC
Trigger: ACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAA...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGCTCTCACAGGAGCAGTaGACGGGGCTTTCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLLSQEQ*TGLSLL
Trigger: TAGCAAGGAAAGCCCCGTTCACTGCTCCTGTGAGAG...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCTAGCCTGCCTTCTGTaGGACTGCTTGCTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFILACLL*DCLLCD
Trigger: GTCGCACAGCAAGCAGTCTCACAGAAGGCAGGCTAG...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGTTTTCTTCTGTGCCTaGTGGGCACATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNVFFCA*WAHVRA
Trigger: AGCACGGACATGTGCCCATCAGGCACAGAAGAAAAC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCAATGTTGCAGCTGCCTaGATGCAGAGCTCAAACACA +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGNVAAA*MQSSNT
Trigger: TGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATT...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGGTACTGCGCGCTCTaGAGGCTCATCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEERYCAL*RLILRR
Trigger: GCGGCGGAGGATGAGCCTGCAGAGCGCGCAGTACCT...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCATTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESFWYRS*RACLDV
Trigger: GACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAA...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGFWYRS*RACLDV
Trigger: GACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAA...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGTTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEFWYRS*RACLDV
Trigger: GACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAA...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACCATGGAGACCTTGACTaGTGGAAGAGGATAGGCATT +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHHGDLD*WKRIGI
Trigger: AATGCCTATCCTCTTCCAGCAGTCAAGGTCTCCATG...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTATAGAGATCAAGCGTTaGTGTCGTATTCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARIEIKR*CRIRRC
Trigger: GCAACGACGAATACGACAGCAACGCTTGATCTCTAT...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCACCTGGTTTCCTaGTGGAGAGTGAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRLHLVS*WRVSCR
Trigger: CCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAA...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTTCTAGAGGCTGCTGCTaGATTACAGGAGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCSRGCC*ITGGCN
Trigger: ATTGCAACCTCCTGTAATGCAGCAGCAGCCTCTAGA...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCCTGCGGTCTATGTTTaGTTGCTGTGCCATTACAGA +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGPAVYV*LLCHYR
Trigger: TCTGTAATGGCACAGCAAGCAAACATAGACCGCAGG...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCGTGACCGTTTGCCCCTaGGGTCTATGTTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVVTVCP*GLCLLA
Trigger: AGCAAGCAAACATAGACCGCAGGGGCAAACGGTCAC...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGCTGGGTACAGGATCCTaGTCTGGACGGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLLGTGS*SGRKTP
Trigger: AGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAG...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCTGGCCTGATGCCAACTaGTCTCAGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVWPDAN*SQRMTL
Trigger: CAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCA...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTGGCCTGATGCCAACTaGTCTCAGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNWPDAN*SQRMTL
Trigger: CAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCTGCTGTTTCTGCTTCTaGTGCATTAACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGCCFCF*CINSCS
Trigger: GGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCA...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCGTGCCTTGTCCCCGTTaGTGTTTCTGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGVPCPR*CFCFCC
Trigger: GCAGCAGAAGCAGAAACAGCAACGGGGACAAGGCAC...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAGTGGAGGGTTCATGGTaGCTTGTCCCCGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARVEGSW*LVPVAV
Trigger: AACAGCAACGGGGACAAGGCACCATGAACCCTCCAC...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCGTGGAGGGTTCATGGTaGCTTGTCCCCGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGVEGSW*LVPVAV
Trigger: AACAGCAACGGGGACAAGGCACCATGAACCCTCCAC...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCAAGAGGGCTGCCACCTaGAGGGGACTGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIKRAAT*RGLCGP
Trigger: TGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTT...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCATGTGGCTGGGGACATaGACGATGGAGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVMWLGT*TMEKVR
Trigger: TCTCACCTTCTCCATCGTGCATGTCCCCAGCCACAT...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACATGGGCACATGTCCGTaGTGCCTTGAATTTCACTCT +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHMGTCP*CLEFHS
Trigger: AGAGTGAAATTCAAGGCAGCACGGACATGTGCCCAT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAATCGTGTTTTCTTCTGTaGCTGATGGGCACATGTCCG +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQSCFLL*LMGTCP
Trigger: CGGACATGTGCCCATCAGGCACAGAAGAAAACACGA...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTCCTGGATGTGCTTTaGTCTACAGCTGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSLLDVL*STAVFQ
Trigger: CTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAG...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCTGGGGCTCCTGGATGTaGTTTGCTCTACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVWGSWM*FALQLS
Trigger: AGACAGCTGTAGAGCAAAGCACATCCAGGAGCCCCA...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTGGGGTTGCCCAGACTaGAGTGACAACTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWWGCPD*SDNWGS
Trigger: GGAGCCCCAGTTGTCACTGCAGTCTGGGCAACCCCA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCTTGCAGCTGCCTGAATaGAGAGCTCAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSLQLPE*RAQTHK
Trigger: TTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAA...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCTGCAGAGCCTGCCTaGATGTCCAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIPAEPA*MSRLQL
Trigger: CAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGG...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTACTGTGGCTTCACTATaGCGCTGGTATGCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: WRGQAELHAYSRTLPGWSTVASL*RWYASV
Trigger: AACAGACGCATACCAGCGCCATAGTGAAGCCACAGT...AGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp CTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGACAGGAGCTAGACTGTaGCTTCACTATGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LTIGGDKLSCMPIVGLCLTGARL*LHYGAG
Trigger: ACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGT...CAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGCAATGTCTCCAAGGTaGACGAGGCAGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTAMSPR*TRQCWQ
Trigger: CTGCCAGCACTGCCTCGTCCACCTTGGAGACATTGC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAATCTGCCTGGCTGGTCTaGTTTCTGTATCGAGCAATG +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQSAWLV*FLYRAM
Trigger: CATTGCTCGATACAGAAACCAGACCAGCCAGGCAGA...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGAGAGGTCCTCTTCATaGGGATGGAAACTATTCAGA +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARERSSS*GWKLFR
Trigger: TCTGAATAGTTTCCATCCCCATGAAGAGGACCTCTC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAACGTATTCGTCGTTGCTaGCCTTCTTTGTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQRIRRC*PSLSPV
Trigger: TACAGGGGACAAAGAAGGCCAGCAACGACGAATACG...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGGGGCGGAAACCCTaGCCTGCTGGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRWGRKP*PAGKRR
Trigger: CCTCCTCTTCCCAGCAGGCCAGGGTTTCCGCCCCCA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCGGGGATAACATATGTTaGGGGCGGAAACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGGDNIC*GRKPWP
Trigger: AGGCCAGGGTTTCCGCCCCCAACATATGTTATCCCC...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCGTTCTGCTTTGGAGCTaGATGTCAGGTTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSVLLWS*MSGFSH
Trigger: ATGGGAAAAACCTGACATCCAGCTCCAAAGCAGAAC...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTAATGAGGAGACTGGCTaGCTGGTGTTGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCNEETG*LVLNDL
Trigger: CAGATCATTCAACACCAGCCAGCCAGTCTCCTCATT...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAATCCATGGAAGGGCCATaGCCTGTCCAGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKSMEGP*PVQVPL
Trigger: GAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGA...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTCCATGGAAGGGCCATaGCCTGTCCAGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGSMEGP*PVQVPL
Trigger: GAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGA...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTCCATGGAAGGGCCATaGCCTGTCCAGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHSMEGP*PVQVPL
Trigger: GAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTAGTGTGGAGGGTTCATaGTGCCTTGTCCCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGSVEGS*CLVPVA
Trigger: AGCAACGGGGACAAGGCACCATGAACCCTCCACACT...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAGTGTGGAGGGTTCATaGTGCCTTGTCCCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSESVEGS*CLVPVA
Trigger: AGCAACGGGGACAAGGCACCATGAACCCTCCACACT...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTACCTGCTGGAGTCTCCTaGCCAGAGGAAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLPAGVS*PEEGLP
Trigger: TGGTAGGCCTTCCTCTGGCCAGGAGACTCCAGCAGG...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACATTGGGCCCCAACTGCTaGACCCCATGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTLGPNC*TPCCCF
Trigger: GAAGCAACAGCATGGGGTCCAGCAGTTGGGGCCCAA...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTTCAGACTGTCTTTTaGGCCCCAACTGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARLQTVF*APTAGP
Trigger: GGGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAGGCCTGGGCCCTCTGTaGGCTACGCAGATACTGCTG +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIGLGPL*ATQILL
Trigger: CAGCAGTATCTGCGTAGCCCACAGAGGGCCCAGGCC...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACACAACCCCTCCCCTCTaGGACAGCAGATGGGCACGT +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHTTPPL*DSRWAR
Trigger: ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGT...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGGACTGCAGTGACAACTaGGGCTCCTGGATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRDCSDN*GSWMCF
Trigger: AAAGCACATCCAGGAGCCCCAGTTGTCACTGCAGTC...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTTTCATATTGCCATTaGGTAGGGGGCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARVSYCH*VGGFTF
Trigger: AAAGGTGAAGCCCCCTACCCAATGGCAATATGAAAC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTTGTAGCGCTCCCTTTTaGGATCAACGAGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: IGGDKLSCMPIVGLCLAGCSAPF*DQRAVW
Trigger: CCACACAGCTCGTTGATCCCAAAAGGGAGCGCTACA...ACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp AGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTCTGCCTGGCTGGTCTaGTTTCTGTATCGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: RGQAELHAYSRTLPGWSGSAWLV*FLYRAR
Trigger: TCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGA...ACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR TCA 90 bp TGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTAGAGAAAGGTTTGCCTaGACTTCACTCCGATTCGGA +
Preference number: 4 (lower is better)
Translates to: WRGQAELHAYSRTLPGWSRERFA*TSLRFG
Trigger: TCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCT...AGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR TCA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGTGGGACCTTGACTTCTaGGGGATTATGGTTATATGG +
Preference number: 4 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVWDLDF*GIMVIW
Trigger: CCATATAACCATAATCCCTCAGAAGTCAAGGTCCCA...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCAGAATTCTGGGACCTTaGCTTCTGAGGGATTATGGT +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGRILGP*LLRDYG
Trigger: ACCATAATCCCTCAGAAGTCAAGGTCCCAGAATTCT...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACACTTGGGTTAGAGGAATaGGGAGACTGGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTLGLEE*GDWLAG
Trigger: ACCAGCCAGCCAGTCTCCTCATTCCTCTAACCCAAG...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCTTGGGTTAGAGGAATaGGGAGACTGGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHLGLEE*GDWLAG
Trigger: ACCAGCCAGCCAGTCTCCTCATTCCTCTAACCCAAG...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGCACGATGGAGAAGGTaGGAGGCGGTGATACCAAGT +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTARWRR*EAVIPS
Trigger: ACTTGGTATCACCGCCTCTCACCTTCTCCATCGTGC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCTCTCACAGGAGCAGTaGACGGGGCTTTCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHLSQEQ*TGLSLL
Trigger: TAGCAAGGAAAGCCCCGTTCACTGCTCCTGTGAGAG...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTCTCACAGGAGCAGTaGACGGGGCTTTCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPLSQEQ*TGLSLL
Trigger: TAGCAAGGAAAGCCCCGTTCACTGCTCCTGTGAGAG...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAAACATTTCCACTGGCTaGAGAGGTCGGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRNISTG*RGRFPI
Trigger: GATGGGGAACCGACCTCTTCAGCCAGTGGAAATGTT...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGGGCGCAAGAATCAGTaGCAGTTCAAACACTGGAAT +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQGRKNQ*QFKHWN
Trigger: ATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCC...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTGCCCACAAGAAGGGGTaGGTTATATGGCACAATGTC +
Preference number: 4 (lower is better)
Translates to: IGGDKLSCMPIVGLCLAGAHKKG*VIWHNV
Trigger: GACATTGTGCCATATAACTCACCCCTTCTTGTGGGC...ACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGAACTGGGAGTTACTTaGTTGAGTTGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHELGVT*LSWGLS
Trigger: ACTCAAACCCCAACTCAAGCAAGTAACTCCCAGTTC...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGGCGGAAACCCTGGCCTaGTGGGAAGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLAETLA*WEEEGR
Trigger: CCTTCCCTCCTCTTCCCAGCAGGCCAGGGTTTCCGC...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCTGCATTACAGGAGGTTaGAATGACGGCTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGCITGG*NDGSNS
Trigger: ACTGTTTGAGCCGTCATTGCAACCTCCTGTAATGCA...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGGTGACCGTTTGCCCCTaGGGTCTATGTTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLVTVCP*GLCLLA
Trigger: AGCAAGCAAACATAGACCGCAGGGGCAAACGGTCAC...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGACCTTCATTCCCAGGTTaGCACTTTGGCCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRPSFPG*HFGLSV
Trigger: CACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGG...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAATGTGGCTGGGGACATaGACGATGGAGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESMWLGT*TMEKVR
Trigger: TCTCACCTTCTCCATCGTGCATGTCCCCAGCCACAT...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATGTGGCTGGGGACATaGACGATGGAGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEMWLGT*TMEKVR
Trigger: TCTCACCTTCTCCATCGTGCATGTCCCCAGCCACAT...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAAACTGCTGGACCCCATaGTGTTGCTTCTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRNCWTP*CCFLGR
Trigger: TCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGTT...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAACTACGCAGATACTGCTaGTTCCTTCCTCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQLRRYC*FLPLQT
Trigger: AGTCTGAAGAGGAAGGAAGCAGCAGTATCTGCGTAG...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGGGCTACGCAGATACTaGTGCTTCCTTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESGLRRY*CFLPLQ
Trigger: CTGAAGAGGAAGGAAGCAGCAGTATCTGCGTAGCCC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGGGCTACGCAGATACTaGTGCTTCCTTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEGLRRY*CFLPLQ
Trigger: CTGAAGAGGAAGGAAGCAGCAGTATCTGCGTAGCCC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATGGGGCTCCTGGATGTaGTTTGCTCTACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARWGSWM*FALQLS
Trigger: AGACAGCTGTAGAGCAAAGCACATCCAGGAGCCCCA...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCGGTCCTCCAGTGTCATaGATCACCAGCTCCCACTAT +
Preference number: 4 (lower is better)
Translates to: SCMPIVGLCLAGLVSVSSGPPVS*ITSSHY
Trigger: ATAGTGGGAGCTGGTGATGCATGACACTGGAGGACC...GCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAATGTCCAGACTTCAGCTaGACCCAGCTTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQCPDFS*TQLRIC
Trigger: ACAGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACA...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGGCTTCACTATGGCGCTaGTATGCGTCTGTTTATTGC +
Preference number: 4 (lower is better)
Translates to: HWRGQAELHAYSRTLPGWASLWR*YASVYC
Trigger: GCAATAAACAGACGCATACCAGCGCCATAGTGAAGC...CCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAACAGGAGCTAGACTGTaGCTTCACTATGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRTGARL*LHYGAG
Trigger: ACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGT...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTCTGCCTGGCTGGTCTaGTTTCTGTATCGAGCAATG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNSAWLV*FLYRAM
Trigger: CATTGCTCGATACAGAAACCAGACCAGCCAGGCAGA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTCAGGAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: RTLPGWSGFCIELDPIFRRTLPG*SGFCIE
Trigger: CTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT...CCTGAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSERTLPG*SGFCIE
Trigger: CTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTATAAGGCTGACCATTaGAGGGGACAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRYKADH*RGQAEL
Trigger: CAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATA...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGGAGACCTTGACTGCTaGAAGAGGATAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQGDLDC*KRIGIV
Trigger: TACAATGCCTATCCTCTTCCAGCAGTCAAGGTCTCC...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACTTTGAAGGTAACCACTaGCTTCTCTCCTGTGTCACA +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHFEGNH*LLSCVT
Trigger: TGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAAA...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACCTGAAGAAAGGTTCCTaGGACAGAAACACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNLKKGS*DRNTSW
Trigger: CCAGCTGGTGTTTCTGTCCCAGGAACCTTTCTTCAG...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAAGGTCCCTGGTTCATTaGCCCTGGTCCAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRRSLVH*PWSRGP
Trigger: CGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCT...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCGATTCCACAGCTGTTTaGAGGCATCTGCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSDSTAV*RHLPVD
Trigger: ATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATC...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCACTTCTGAGGGATTATaGTTATATGGCTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSTSEGL*LYGSMG
Trigger: TCCCATGGAGCCATATAACCATAATCCCTCAGAAGT...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTACTTCTGAGGGATTATaGTTATATGGCTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARTSEGL*LYGSMG
Trigger: TCCCATGGAGCCATATAACCATAATCCCTCAGAAGT...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCAATGAGGAGACTGGCTaGCTGGTGTTGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSNEETG*LVLNDL
Trigger: CAGATCATTCAACACCAGCCAGCCAGTCTCCTCATT...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTGCCACTCGGAGTGCTaGCCTGATGCCAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWCHSEC*PDANCS
Trigger: AGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATCCATGGAAGGGCCATaGCCTGTCCAGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVESMEGP*PVQVPL
Trigger: GAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGA...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAACTTTGGCCTCAGTGTaGAGGGTTCATGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARTLASV*RVHGAL
Trigger: CAAGGCACCATGAACCCTCCACACTGAGGCCAAAGT...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCTCHGL*SLHSQV
Trigger: AACCTGGGAATGAAGGCTCCATAAACCATGGCATGT...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCACACTCAGCGGGCTGGTaGAATACTTACACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESHSAGW*NTYTLL
Trigger: CAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTG...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATGCACACTCAGCGGGCTaGTGGAATACTTACACCCTC +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHAHSAG*WNTYTL
Trigger: GAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATCACTTCCCATGTGGCTaGGGACATGCACGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHHFPCG*GHARWR
Trigger: TCTCCATCGTGCATGTCCCCAGCCACATGGGAAGTG...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCCTGCTGGAGTCTCCTaGCCAGAGGAAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNPAGVS*PEEGLP
Trigger: TGGTAGGCCTTCCTCTGGCCAGGAGACTCCAGCAGG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGAAGGGCATTCCCTGCTaGAGTCTCCTGGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWKGIPC*SLLARG
Trigger: TCCTCTGGCCAGGAGACTCCAGCAGGGAATGCCCTT...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGGGTGGGAAGTAGAATaGGGGCACAAAAACCAACCA +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNGWEVE*GHKNQP
Trigger: TGGTTGGTTTTTGTGCCCCCATTCTACTTCCCACCC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAACATGCTGTTGCTTCTTaGGGAGATGTGATGTTGCAC +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQHAVAS*GDVMLH
Trigger: GTGCAACATCACATCTCCCCAAGAAGCAACAGCATG...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACACAACCCCTCCCCTCTaGGACAGCAGATGGGCACGT +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHTTPPL*DSRWAR
Trigger: ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGT...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAGACAACTGGGGCTCCTaGATGTGCTTTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRDNWGS*MCFALQ
Trigger: CTGTAGAGCAAAGCACATCCAGGAGCCCCAGTTGTC...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CAA 72 bp CAGACTGCAGTGACAACTGGGGCTCCTGGATGTGCTTaGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QTAVTTGAPGCA*LYSCLPALKFH
Trigger: GTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCCCAGTTGTCACTGCAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCATGTTTCTTGCAGAATaGGGTTCTCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGMFLAE*GSLWLH
Trigger: GTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACAT...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACATGTTTCTTGCAGAATaGGGTTCTCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHMFLAE*GSLWLH
Trigger: GTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACAT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAATGGAATCCAGAGTGGTaGGGCGGGCTTTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKWNPEW*GGLFPK
Trigger: TTTGGGGAAAAGCCCGCCTCACCACTCTGGATTCCA...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCAGAATTCTGGGACCTTaGCTTCTGAGGGATTATGGT +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSRILGP*LLRDYG
Trigger: ACCATAATCCCTCAGAAGTCAAGGTCCCAGAATTCT...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCGGGCCATTGAGGGACTaGGTTCTGCTTTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIAGPLRD*VLLWSW
Trigger: CCAGCTCCAAAGCAGAACTCAGTCCCTCAATGGCCC...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGGCACGATGGAGAAGGTaGGAGGCGGTGATACCAAGT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGARWRR*EAVIPS
Trigger: ACTTGGTATCACCGCCTCTCACCTTCTCCATCGTGC...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTAACATTTCCACTGGCTaGAGAGGTCGGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFINISTG*RGRFPI
Trigger: GATGGGGAACCGACCTCTTCAGCCAGTGGAAATGTT...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACGTTTTCTTCTGTGCCTaGTGGGCACATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHVFFCA*WAHVRA
Trigger: AGCACGGACATGTGCCCATCAGGCACAGAAGAAAAC...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTTGCCCAGACTGCAGTaGCAACTGGGGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWLPRLQ*QLGLLD
Trigger: ATCCAGGAGCCCCAGTTGTCACTGCAGTCTGGGCAA...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTTTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: GLPELHSDSDLLDSLPGLFWYRS*RACLDV
Trigger: GACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAA...AAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR GCA 90 bp ACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTCAGGTCCACTCCGATTCGGATTTaGTCGATTCTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TLPGWSGFCIELDPIFRSTPIRI*SILCLA
Trigger: GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGT...GGACCTGAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGACCTATAGTAGGACTCTaGCTGGCTGGTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRPIVGL*LAGLVS
Trigger: AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGG...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTTCTCCTATAGTAGGACTCTaGCTGGCTGGTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: DKLSCMPIVGLCLAGLVSPIVGL*LAGLVS
Trigger: AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGG...AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGGGGACAAGCTGAGCTaGATGCCTATAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTGDKLS*MPIVGL
Trigger: GAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACATCTTTCATCCACCACTaGCTCCTGAAAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTSFIHH*LLKDPG
Trigger: CCCAGGGTCTTTCAGGAGGCAGTGGTGGATGAAAGA...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTTCTTTCATCCACCACTaGCTCCTGAAAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFISFIHH*LLKDPG
Trigger: CCCAGGGTCTTTCAGGAGGCAGTGGTGGATGAAAGA...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATGTCGTATTCGTCGTTaGTGGCCTTCTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARCRIRR*WPSLSP
Trigger: AGGGGACAAAGAAGGCCAGCAACGACGAATACGACA...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCATTGCACCTGGTTTCCTaGTGGAGAGTGAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPLHLVS*WRVSCR
Trigger: CCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAA...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGAAAGATGTAAGGGGTTaGTGGGAAGGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRKDVRG*WEGGCD
Trigger: ATCACAGCCACCTTCCCAGCAACCCCTTACATCTTT...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAATGCATTACAGGAGGTTaGAATGACGGCTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQCITGG*NDGSNS
Trigger: ACTGTTTGAGCCGTCATTGCAACCTCCTGTAATGCA...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACATCTGTTATCAGCCATaGTGTAGGAAGAATCCCAGT +
Preference number: 4 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHICYQP*CRKNPS
Trigger: ACTGGGATTCTTCCTACAGCATGGCTGATAACAGAT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATGTGACCGTTTGCCCCTaGGGTCTATGTTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHVTVCP*GLCLLA
Trigger: AGCAAGCAAACATAGACCGCAGGGGCAAACGGTCAC...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGCTCCTGGTGACCGTTTaGCCCTGCGGTCTATGTTTG +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWLLVTV*PCGLCL
Trigger: CAAACATAGACCGCAGGGGCAAACGGTCACCAGGAG...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGCTGGGTACAGGATCCTaGTCTGGACGGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWLGTGS*SGRKTP
Trigger: AGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAG...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACCTGAGAGATAATCAATaGCAAACCCACCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNLRDNQ*QTHPWL
Trigger: CAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAG...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAAGGTGCCACTCGGAGTaGTGGCCTGATGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQRCHSE*WPDANC
Trigger: GCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCT...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCTGCATTAACAGCTaGTCCAGAGCAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGCCINS*SRAEGP
Trigger: TGGACCTTCTGCTCTGGAGCAGCTGTTAATGCAGCA...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCTGTTTCTGCTTCTGCTaGATTAACAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSCFCFC*INSCSR
Trigger: TCTGGAGCAGCTGTTAATGCAGCAGAAGCAGAAACA...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGACCCCGTTGCTGTTTCTaGTTCTGCTGCATTAACAGC +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRPRCCF*FCCINS
Trigger: GCTGTTAATGCAGCAGAAGCAGAAACAGCAACGGGG...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTTCATTCCCAGGTTaGCACTTTGGCCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHPSFPG*HFGLSV
Trigger: CACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGG...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTGTGTGGGCCAGTCCTaGAAACCCAACATGCCATGG +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHCVGQS*KPNMPW
Trigger: CCATGGCATGTTGGGTTTGCAGGACTGGCCCACACA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTAACTGCGAACATTTCGTaGACACTCAGCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLTANIS*TLSGLV
Trigger: CACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGT...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTTTCTTTTTGTTGCACTaGGAACATTTCGTGCACACT +
Preference number: 4 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARFFLLH*EHFVHT
Trigger: AGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATATGTGGCTGGGGACATaGACGATGGAGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHMWLGT*TMEKVR
Trigger: TCTCACCTTCTCCATCGTGCATGTCCCCAGCCACAT...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTTGGCTTCTCCCATCTaGCTTCCCTTCTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLLASPI*LPFSAF
Trigger: GAAAGCTGAGAAGGGAAGGCAGATGGGAGAAGCCAA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGTCGTGTTTTCTTCTGTaGCTGATGGGCACATGTCCG +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSESCFLL*LMGTCP
Trigger: CGGACATGTGCCCATCAGGCACAGAAGAAAACACGA...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGCTCCTGGATGTGCTTTaGTCTACAGCTGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLLLDVL*STAVFQ
Trigger: CTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAG...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACATGGGGCTCCTGGATGTaGTTTGCTCTACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTWGSWM*FALQLS
Trigger: AGACAGCTGTAGAGCAAAGCACATCCAGGAGCCCCA...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTGGGGCTCCTGGATGTaGTTTGCTCTACAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHWGSWM*FALQLS
Trigger: AGACAGCTGTAGAGCAAAGCACATCCAGGAGCCCCA...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAACAAAAGGTTTCATATTaGCATTGGGTAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQQKVSY*HWVGGF
Trigger: GAAGCCCCCTACCCAATGGCAATATGAAACCTTTTG...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCTTGCAGCTGCCTGAATaGAGAGCTCAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSLQLPE*RAQTHK
Trigger: TTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAA...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGTGTCCAGACTTCAGCTaGACCCAGCTTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: LTIGGDKLSCMPIVGLCLCPDFS*TQLRIC
Trigger: ACAGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACA...CAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGCTCGATTCTTTGCCTaGCCTTGCAGTGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEARFFA*PCSVVI
Trigger: GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTCTGCCTGGCTGGTCTaGTTTCTGTATCGAGCAATG +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLSAWLV*FLYRAM
Trigger: CATTGCTCGATACAGAAACCAGACCAGCCAGGCAGA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATCTGCCTGGCTGGTCTaGTTTCTGTATCGAGCAATG +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARSAWLV*FLYRAM
Trigger: CATTGCTCGATACAGAAACCAGACCAGCCAGGCAGA...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCATATAAGGCTGACCATTaGAGGGGACAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESYKADH*RGQAEL
Trigger: CAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATA...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGTATAAGGCTGACCATTaGAGGGGACAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSCMPIVGLCLAGLVSVSYKADH*RGQAEL
Trigger: CAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATA...CGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGTATAAGGCTGACCATTaGAGGGGACAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEYKADH*RGQAEL
Trigger: CAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATA...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCACGTATTCGTCGTTGCTaGCCTTCTTTGTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESRIRRC*PSLSPV
Trigger: TACAGGGGACAAAGAAGGCCAGCAACGACGAATACG...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTGAAGAAAGGTTCCTaGGACAGAAACACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARLKKGS*DRNTSW
Trigger: CCAGCTGGTGTTTCTGTCCCAGGAACCTTTCTTCAG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCACCTGGTTTCCTGCTaGAGAGTGAGCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGHLVSC*RVSCRL
Trigger: CAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCGCTCAAACAGTTTTATaGGGTCTTGGGTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSAQTVL*GLGSEG
Trigger: ACCTTCAGACCCAAGACCCCATAAAACTGTTTGAGC...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCATCTCAAACGGCATTCTaGGTACAGGATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESSQTAF*VQDPAL
Trigger: CAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGA...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCTTGAATGATCTGAACTaGCAGGAAGTGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSLNDLN*QEVMET
Trigger: GGTCTCCATCACTTCCTGCCAGTTCAGATCATTCAA...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGTATCTGGAGTCCCAATaGGTCCAAAATTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVYLESQ*VQNWRM
Trigger: CATTCTCCAATTTTGGACCCATTGGGACTCCAGATA...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACCCACCCATGGCTaGCTTATCAGTTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEKPTHG*LISFPP
Trigger: CGGTGGAAAACTGATAAGCCAGCCATGGGTGGGTTT...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTGCCAAACCCACCCATaGCTGGCTTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLCQTHP*LAYQFS
Trigger: GGAAAACTGATAAGCCAGCCATGGGTGGGTTTGGCA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATGCCAAACCCACCCATaGCTGGCTTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARCQTHP*LAYQFS
Trigger: GGAAAACTGATAAGCCAGCCATGGGTGGGTTTGGCA...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTTGCCACTCGGAGTGCTaGCCTGATGCCAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGCHSEC*PDANCS
Trigger: AGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCA...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTCCCAGGTTGCCACTTTaGCCTCAGTGTGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGPRLPL*PQCGGF
Trigger: GAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGG...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCACTCAGCGGGCTGGTaGAATACTTACACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIHSAGW*NTYTLL
Trigger: CAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTG...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGCACACTCAGCGGGCTaGTGGAATACTTACACCCTC +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHAHSAG*WNTYTL
Trigger: GAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCTTTCACTTCCCATGTaGCTGGGGACATGCACGATG +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHLSLPM*LGTCTM
Trigger: CATCGTGCATGTCCCCAGCCACATGGGAAGTGAAAG...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAGGGTGGGAAGTAGAATaGGGGCACAAAAACCAACCA +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRGWEVE*GHKNQP
Trigger: TGGTTGGTTTTTGTGCCCCCATTCTACTTCCCACCC...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACCTTCAGACTGTCTTTTaGGCCCCAACTGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHLQTVF*APTAGP
Trigger: GGGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAG...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGCTTCAGACTGTCTTTTaGGCCCCAACTGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVLQTVF*APTAGP
Trigger: GGGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAG...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTGACTGCAGTGACAACTaGGGCTCCTGGATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIDCSDN*GSWMCF
Trigger: AAAGCACATCCAGGAGCCCCAGTTGTCACTGCAGTC...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAGCAGAGGGGAGCTCTTaGGGTCCTCAAACGGCATTC +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEAEGSS*GPQTAF
Trigger: GAATGCCGTTTGAGGACCCCAAGAGCTCCCCTCTGC...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000508461.5
CDS-3UTR TCA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCTAACTGCTGAGAGTTaGAAGCTTTTTGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGLTAES*KLFGIA
Trigger: TGCTATTCCAAAAAGCTTTCAACTCTCAGCAGTTAG...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCAGTCCATGGAGACCTTaGCTGCTGGAAGAGGATAGG +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGSPWRP*LLEEDR
Trigger: CCTATCCTCTTCCAGCAGTCAAGGTCTCCATGGACT...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACTGTCGCACTAATACTTaGGAGGTCCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHCRTNT*EVLFMG
Trigger: CCCCATGAAGAGGACCTCTCAAGTATTAGTGCGACA...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCCCTGTAATACCCTGGTaGCCTTTGGAAAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVPVIPW*PLEKSK
Trigger: CTTGGATTTTTCCAAAGGTCACCAGGGTATTACAGG...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAGGTGATGAATGGGGATaGACTGGGAGTTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRGDEWG*TGSYLL
Trigger: AAGCAAGTAACTCCCAGTTCATCCCCATTCATCACC...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTGGTGATGAATGGGGATaGACTGGGAGTTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGGDEWG*TGSYLL
Trigger: AAGCAAGTAACTCCCAGTTCATCCCCATTCATCACC...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACGACTGTGCTGTTGGCTaGGCTGGTAAAGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHDCAVG*AGKDVR
Trigger: CCTTACATCTTTACCAGCTCAGCCAACAGCACAGTC...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACTGGAATCCAGAGTGGTaGGGCGGGCTTTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHWNPEW*GGLFPK
Trigger: TTTGGGGAAAAGCCCGCCTCACCACTCTGGATTCCA...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATGGAATCCAGAGTGGTaGGGCGGGCTTTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEWNPEW*GGLFPK
Trigger: TTTGGGGAAAAGCCCGCCTCACCACTCTGGATTCCA...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTTTGGGTATCTTTCCTaGTTGAGAGAGAATCCGGTG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNFGYLS*LRENPV
Trigger: CACCGGATTCTCTCTCAATCAGGAAAGATACCCAAA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAACTTGGGTTAGAGGAATaGGGAGACTGGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVELGLEE*GDWLAG
Trigger: ACCAGCCAGCCAGTCTCCTCATTCCTCTAACCCAAG...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCCTCGGAGTGCTGGCCTaGTGCCAACTGCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCLGVLA*CQLLSE
Trigger: CTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAG...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTCTCTGAAGAGCAATaGGCGTTATCTCACCCCTTT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARLSEEQ*ALSHPF
Trigger: AAAGGGGTGAGATAACGCTCATTGCTCTTCAGAGAG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCATCCAACCACTCTCTCTaGAGAGCAATGAGCGTTATC +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESSNHSL*RAMSVI
Trigger: GATAACGCTCATTGCTCTTCAGAGAGAGTGGTTGGA...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACATTTGCTCGATTCTTTaGCTGGCCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNICSIL*LALQCC
Trigger: ACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAAT...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAACTCCGATTCGGATTTaGTCGATTCTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTTPIRI*SILCLA
Trigger: GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGT...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATACTCCGATTCGGATTTaGTCGATTCTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHTPIRI*SILCLA
Trigger: GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGT...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTACTATGGCGCTGGTATaGGTCTGTTTATTGCTGATA +
Preference number: 4 (lower is better)
Translates to: WRGQAELHAYSRTLPGWSTMALV*VCLLLI
Trigger: TATCAGCAATAAACAGACGCATACCAGCGCCATAGT...AGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATCCTATAGTAGGACTCTaGCTGGCTGGTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHPIVGL*LAGLVS
Trigger: AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGG...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAAGGGGACAAGCTGAGCTaGATGCCTATAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKGDKLS*MPIVGL
Trigger: GAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCC...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACATGGAGACCTTGACTaGTGGAAGAGGATAGGCATT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARHGDLD*WKRIGI
Trigger: AATGCCTATCCTCTTCCAGCAGTCAAGGTCTCCATG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAATCTTTCATCCACCACTaGCTCCTGAAAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKSFIHH*LLKDPG
Trigger: CCCAGGGTCTTTCAGGAGGCAGTGGTGGATGAAAGA...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCTCTTTCATCCACCACTaGCTCCTGAAAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGSFIHH*LLKDPG
Trigger: CCCAGGGTCTTTCAGGAGGCAGTGGTGGATGAAAGA...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGACCCTGGGCTCCCATCTaGAGCCAGCGACTCTATCAC +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRPWAPI*SQRLYH
Trigger: GTGATAGAGTCGCTGGCTGCAGATGGGAGCCCAGGG...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGGATTTTACCTGCACTaGCACATTCTGCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNGFYLH*HILLSC
Trigger: ACAGGAAAGCAGAATGTGGCAGTGCAGGTAAAATCC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000508461.5
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTTGCACCTGGTTTCCTaGTGGAGAGTGAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWLHLVS*WRVSCR
Trigger: CCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGTCTAGAGGCTGCTGCTaGATTACAGGAGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSESRGCC*ITGGCN
Trigger: ATTGCAACCTCCTGTAATGCAGCAGCAGCCTCTAGA...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTCTCCTGGTGACCGTTTaGCCCTGCGGTCTATGTTTG +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGLLVTV*PCGLCL
Trigger: CAAACATAGACCGCAGGGGCAAACGGTCACCAGGAG...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACCTGGGTACAGGATCCTaGTCTGGACGGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHLGTGS*SGRKTP
Trigger: AGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAG...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTGAGAGATAATCAATaGCAAACCCACCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARLRDNQ*QTHPWL
Trigger: CAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTGGCCTGATGCCAACTaGTCTCAGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHWPDAN*SQRMTL
Trigger: CAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTGGCCTGATGCCAACTaGTCTCAGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWWPDAN*SQRMTL
Trigger: CAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACTGCTGCATTAACAGCTaGTCCAGAGCAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHCCINS*SRAEGP
Trigger: TGGACCTTCTGCTCTGGAGCAGCTGTTAATGCAGCA...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTGTTTCTGCTTCTGCTaGATTAACAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNCFCFC*INSCSR
Trigger: TCTGGAGCAGCTGTTAATGCAGCAGAAGCAGAAACA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCCCGTTGCTGTTTCTaGTTCTGCTGCATTAACAGC +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHPRCCF*FCCINS
Trigger: GCTGTTAATGCAGCAGAAGCAGAAACAGCAACGGGG...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCTGTGTGGGCCAGTCCTaGAAACCCAACATGCCATGG +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIACVGQS*KPNMPW
Trigger: CCATGGCATGTTGGGTTTGCAGGACTGGCCCACACA...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGTGTGGGCCAGTCCTaGAAACCCAACATGCCATGG +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWCVGQS*KPNMPW
Trigger: CCATGGCATGTTGGGTTTGCAGGACTGGCCCACACA...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGAACGGGGCTTTCCTTaGTACACACTGACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTERGFP*YTLTRS
Trigger: GCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAGTGAAGGGCATTCCCTaGTGGAGTCTCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRVKGIP*WSLLAR
Trigger: TCTGGCCAGGAGACTCCAGCAGGGAATGCCCTTCAC...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTACGCAGATACTGCTaGTTCCTTCCTCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARLRRYC*FLPLQT
Trigger: AGTCTGAAGAGGAAGGAAGCAGCAGTATCTGCGTAG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGGGGCTACGCAGATACTaGTGCTTCCTTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVGLRRY*CFLPLQ
Trigger: CTGAAGAGGAAGGAAGCAGCAGTATCTGCGTAGCCC...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGACTGGAATGTTGCAGCTaGCTGAATGCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRLECCS*LNAELK
Trigger: TTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAG...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAACCTGCAGAGCCTGCCTaGATGTCCAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQPAEPA*MSRLQL
Trigger: CAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGG...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTGATAATTCCCAATTaGGAAGACTTCACACGGCAT +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSLIIPN*EDFTRH
Trigger: ATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAG...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACACTGTGGCTTCACTATaGCGCTGGTATGCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHTVASL*RWYASV
Trigger: AACAGACGCATACCAGCGCCATAGTGAAGCCACAGT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACACAGGAGCTAGACTGTaGCTTCACTATGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHTGARL*LHYGAG
Trigger: ACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGT...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGACAGGAGCTAGACTGTaGCTTCACTATGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWTGARL*LHYGAG
Trigger: ACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGT...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCACAGGAGCTAGACTGTaGCTTCACTATGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGTGARL*LHYGAG
Trigger: ACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGT...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAGCAATGTCTCCAAGGTaGACGAGGCAGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQAMSPR*TRQCWQ
Trigger: CTGCCAGCACTGCCTCGTCCACCTTGGAGACATTGC...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTAAAATTGTGGTCAGATaGTCTCCTTTGGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCKIVVR*SPLEEA
Trigger: AGCTTCTTCCAAAGGAGACCATCTGACCACAATTTT...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTGGAGACCTTGACTGCTaGAAGAGGATAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGGDLDC*KRIGIV
Trigger: TACAATGCCTATCCTCTTCCAGCAGTCAAGGTCTCC...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGTCTCTTTGGCTTCACTaGGGTCTTCCAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVSLWLH*GLPVLI
Trigger: AATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGA...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCTTTGAAGGTAACCACTaGCTTCTCTCCTGTGTCACA +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVFEGNH*LLSCVT
Trigger: TGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAAA...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGGGGGATAACATATGTTaGGGGCGGAAACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWGDNIC*GRKPWP
Trigger: AGGCCAGGGTTTCCGCCCCCAACATATGTTATCCCC...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACCACCTGGTTTCCTGCTaGAGAGTGAGCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHHLVSC*RVSCRL
Trigger: CAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTG...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCCTGGTTCATTGGCCCTaGTCCAGAGGGCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCLVHWP*SRGPLL
Trigger: CAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAG...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAGATTCCACAGCTGTTTaGAGGCATCTGCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRDSTAV*RHLPVD
Trigger: ATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATC...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTGATTCCACAGCTGTTTaGAGGCATCTGCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGDSTAV*RHLPVD
Trigger: ATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATC...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGTTCTGCTTTGGAGCTaGATGTCAGGTTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNVLLWS*MSGFSH
Trigger: ATGGGAAAAACCTGACATCCAGCTCCAAAGCAGAAC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCTTGAATGATCTGAACTaGCAGGAAGTGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVLNDLN*QEVMET
Trigger: GGTCTCCATCACTTCCTGCCAGTTCAGATCATTCAA...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTAATGAGGAGACTGGCTaGCTGGTGTTGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGNEETG*LVLNDL
Trigger: CAGATCATTCAACACCAGCCAGCCAGTCTCCTCATT...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAAAACCCACCCATGGCTaGCTTATCAGTTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPKPTHG*LISFPP
Trigger: CGGTGGAAAACTGATAAGCCAGCCATGGGTGGGTTT...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAATGCCACTCGGAGTGCTaGCCTGATGCCAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQCHSEC*PDANCS
Trigger: AGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCA...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATAGTGTGGAGGGTTCATaGTGCCTTGTCCCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNSVEGS*CLVPVA
Trigger: AGCAACGGGGACAAGGCACCATGAACCCTCCACACT...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGAGTGTGGAGGGTTCATaGTGCCTTGTCCCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWSVEGS*CLVPVA
Trigger: AGCAACGGGGACAAGGCACCATGAACCCTCCACACT...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAGCACACTCAGCGGGCTaGTGGAATACTTACACCCTC +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIAHSAG*WNTYTL
Trigger: GAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTCACTTCCCATGTGGCTaGGGACATGCACGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGHFPCG*GHARWR
Trigger: TCTCCATCGTGCATGTCCCCAGCCACATGGGAAGTG...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCTTTCACTTCCCATGTaGCTGGGGACATGCACGATG +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGLSLPM*LGTCTM
Trigger: CATCGTGCATGTCCCCAGCCACATGGGAAGTGAAAG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCCTTTCACTTCCCATGTaGCTGGGGACATGCACGATG +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGLSLPM*LGTCTM
Trigger: CATCGTGCATGTCCCCAGCCACATGGGAAGTGAAAG...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAAAGGGCATTCCCTGCTaGAGTCTCCTGGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRKGIPC*SLLARG
Trigger: TCCTCTGGCCAGGAGACTCCAGCAGGGAATGCCCTT...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCACTGTATCCTCGATTaGGGCTCGAGCACCTACAGA +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGHCILD*GSSTYR
Trigger: TCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGGTGTCAGGCTGTGAATaGACTAGCCTGCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWVSGCE*TSLPSV
Trigger: CACAGAAGGCAGGCTAGTCCATTCACAGCCTGACAC...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAATTGGGCCCCAACTGCTaGACCCCATGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQLGPNC*TPCCCF
Trigger: GAAGCAACAGCATGGGGTCCAGCAGTTGGGGCCCAA...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCTCGTCTCTTCCAAAATaGACGACGTCGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSSSLPK*TTSCFL
Trigger: AAGAAAACACGACGTCGTCCATTTTGGAAGAGACGA...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGACAACTGGGGCTCCTaGATGTGCTTTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHDNWGS*MCFALQ
Trigger: CTGTAGAGCAAAGCACATCCAGGAGCCCCAGTTGTC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGCCTCAAACGGCATTCTaGGTACAGGATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWPQTAF*VQDPAL
Trigger: CAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGG...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000507469.5
CDS-3UTR CCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGCCTCAAACGGCATTCTaGGTACAGGATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVPQTAF*VQDPAL
Trigger: CAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGG...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000507469.5
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAGCAGAGGGGAGCTCTTaGGGTCCTCAAACGGCATTC +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRAEGSS*GPQTAF
Trigger: GAATGCCGTTTGAGGACCCCAAGAGCTCCCCTCTGC...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000507469.5
CDS-3UTR CCA 90 bp ACTGATTATAAGGCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTCACCAGCTCCCACTATaGACTATGCTGGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: TDYKADHWRGQAELHAYSHQLPL*TMLVTW
Trigger: CCAGGTCACCAGCATAGTCCATAGTGGGAGCTGGTG...ACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATAATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR TCA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAACTAACTGCTGAGAGTTaGAAGCTTTTTGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQLTAES*KLFGIA
Trigger: TGCTATTCCAAAAAGCTTTCAACTCTCAGCAGTTAG...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTAGTCCATGGAGACCTTaGCTGCTGGAAGAGGATAGG +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGSPWRP*LLEEDR
Trigger: CCTATCCTCTTCCAGCAGTCAAGGTCTCCATGGACT...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCAGTCCATGGAGACCTTaGCTGCTGGAAGAGGATAGG +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGISPWRP*LLEEDR
Trigger: CCTATCCTCTTCCAGCAGTCAAGGTCTCCATGGACT...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTGTCGCACTAATACTTaGGAGGTCCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHCRTNT*EVLFMG
Trigger: CCCCATGAAGAGGACCTCTCAAGTATTAGTGCGACA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGGTGATGAATGGGGATaGACTGGGAGTTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTGDEWG*TGSYLL
Trigger: AAGCAAGTAACTCCCAGTTCATCCCCATTCATCACC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGACTGTGCTGTTGGCTaGGCTGGTAAAGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHDCAVG*AGKDVR
Trigger: CCTTACATCTTTACCAGCTCAGCCAACAGCACAGTC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGATGGGACCTTGACTTCTaGGGGATTATGGTTATATGG +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRWDLDF*GIMVIW
Trigger: CCATATAACCATAATCCCTCAGAAGTCAAGGTCCCA...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGATACTTACACCCTCTTaGCAGCGAGAAACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRILTPS*QRETEK
Trigger: CTTTTCTGTTTCTCGCTGTCAAGAGGGTGTAAGTAT...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACATACTTACACCCTCTTaGCAGCGAGAAACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNILTPS*QRETEK
Trigger: CTTTTCTGTTTCTCGCTGTCAAGAGGGTGTAAGTAT...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGGCACGATGGAGAAGGTaGGAGGCGGTGATACCAAGT +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLARWRR*EAVIPS
Trigger: ACTTGGTATCACCGCCTCTCACCTTCTCCATCGTGC...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCCTTCTGACAGGCCTTaGACTCTCCCTTATGGAACA +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGPSDRP*TLPYGT
Trigger: TGTTCCATAAGGGAGAGTTCAAGGCCTGTCAGAAGG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTACCTTCTGACAGGCCTTaGACTCTCCCTTATGGAACA +
Preference number: 4 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLPSDRP*TLPYGT
Trigger: TGTTCCATAAGGGAGAGTTCAAGGCCTGTCAGAAGG...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCCTAGCCTGCCTTCTGTaGGACTGCTTGCTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCLACLL*DCLLCD
Trigger: GTCGCACAGCAAGCAGTCTCACAGAAGGCAGGCTAG...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGTTTTCTTCTGTGCCTaGTGGGCACATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGVFFCA*WAHVRA
Trigger: AGCACGGACATGTGCCCATCAGGCACAGAAGAAAAC...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACGGGCGCAAGAATCAGTaGCAGTTCAAACACTGGAAT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHGRKNQ*QFKHWN
Trigger: ATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCC...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTTCTATTTGCTCGATTCTTTaGCTGGCCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: DKLSCMPIVGLCLAGLVSICSIL*LALQCC
Trigger: ACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAAT...AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACTCCGATTCGGATTTaGTCGATTCTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVTPIRI*SILCLA
Trigger: GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGT...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTAACTCCGATTCGGATTTaGTCGATTCTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLTPIRI*SILCLA
Trigger: GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGT...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCGAACAGAGAAAGGTTTaGCTGAACTTCACTCCGATT +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVEQRKV*LNFTPI
Trigger: AATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTC...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGACTATGGCGCTGGTATaGGTCTGTTTATTGCTGATA +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRTMALV*VCLLLI
Trigger: TATCAGCAATAAACAGACGCATACCAGCGCCATAGT...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGCCTATAGTAGGACTCTaGCTGGCTGGTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWPIVGL*LAGLVS
Trigger: AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGG...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGGGGGACAAGCTGAGCTaGATGCCTATAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWGDKLS*MPIVGL
Trigger: GAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCC...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCTGTCGTATTCGTCGTTaGTGGCCTTCTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGCRIRR*WPSLSP
Trigger: AGGGGACAAAGAAGGCCAGCAACGACGAATACGACA...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTATAGAGATCAAGCGTTaGTGTCGTATTCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGIEIKR*CRIRRC
Trigger: GCAACGACGAATACGACAGCAACGCTTGATCTCTAT...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAATAGAGATCAAGCGTTaGTGTCGTATTCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESIEIKR*CRIRRC
Trigger: GCAACGACGAATACGACAGCAACGCTTGATCTCTAT...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCCCTGGGCTCCCATCTaGAGCCAGCGACTCTATCAC +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLPWAPI*SQRLYH
Trigger: GTGATAGAGTCGCTGGCTGCAGATGGGAGCCCAGGG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTCCCTGGGCTCCCATCTaGAGCCAGCGACTCTATCAC +
Preference number: 4 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCPWAPI*SQRLYH
Trigger: GTGATAGAGTCGCTGGCTGCAGATGGGAGCCCAGGG...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGGTCTGGGATTTTACCTaGACTGCCACATTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLVWDFT*TATFCF
Trigger: AAAGCAGAATGTGGCAGTGCAGGTAAAATCCCAGAC...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347615.6
CDS-3UTR GCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAACTGGGAGTTACTTaGTTGAGTTGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESELGVT*LSWGLS
Trigger: ACTCAAACCCCAACTCAAGCAAGTAACTCCCAGTTC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCTTGCACCTGGTTTCCTaGTGGAGAGTGAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGILHLVS*WRVSCR
Trigger: CCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAA...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAAAGATGTAAGGGGTTaGTGGGAAGGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHKDVRG*WEGGCD
Trigger: ATCACAGCCACCTTCCCAGCAACCCCTTACATCTTT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATCCTGCGGTCTATGTTTaGTTGCTGTGCCATTACAGA +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHPAVYV*LLCHYR
Trigger: TCTGTAATGGCACAGCAAGCAAACATAGACCGCAGG...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCGTGACCGTTTGCCCCTaGGGTCTATGTTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIVTVCP*GLCLLA
Trigger: AGCAAGCAAACATAGACCGCAGGGGCAAACGGTCAC...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGCTCCTGGTGACCGTTTaGCCCTGCGGTCTATGTTTG +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLLLVTV*PCGLCL
Trigger: CAAACATAGACCGCAGGGGCAAACGGTCACCAGGAG...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTAGTTTTCCACCGATCTaGAGTCCTTCTATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGSFPPI*SPSIPV
Trigger: AACAGGGATAGAAGGACTGCAGATCGGTGGAAAACT...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATCTGAGAGATAATCAATaGCAAACCCACCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHLRDNQ*QTHPWL
Trigger: CAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAG...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCGCAGAAGGTCCAGGATaGATCATGGAACTGGACCAG +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIAEGPG*IMELDQ
Trigger: CTGGTCCAGTTCCATGATGCATCCTGGACCTTCTGC...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAGCAGAAGGTCCAGGATaGATCATGGAACTGGACCAG +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIAEGPG*IMELDQ
Trigger: CTGGTCCAGTTCCATGATGCATCCTGGACCTTCTGC...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCTGCTGCATTAACAGCTaGTCCAGAGCAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGCCINS*SRAEGP
Trigger: TGGACCTTCTGCTCTGGAGCAGCTGTTAATGCAGCA...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTGTTTCTGCTTCTGCTaGATTAACAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLCFCFC*INSCSR
Trigger: TCTGGAGCAGCTGTTAATGCAGCAGAAGCAGAAACA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTTGCTGTTTCTGCTTCTaGTGCATTAACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFICCFCF*CINSCS
Trigger: GGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCA...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAGTGCCTTGTCCCCGTTaGTGTTTCTGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRVPCPR*CFCFCC
Trigger: GCAGCAGAAGCAGAAACAGCAACGGGGACAAGGCAC...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACCTTCATTCCCAGGTTaGCACTTTGGCCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIPSFPG*HFGLSV
Trigger: CACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGG...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGTGGACCCCATGCTGTTaGTTCTTGGGGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVWTPCC*FLGRCD
Trigger: ATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCA...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTAACTGCTGGACCCCATaGTGTTGCTTCTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGNCWTP*CCFLGR
Trigger: TCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGTT...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGGGCTACGCAGATACTaGTGCTTCCTTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNGLRRY*CFLPLQ
Trigger: CTGAAGAGGAAGGAAGCAGCAGTATCTGCGTAGCCC...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTGGCACATGTCCGTGCTaGCTTGAATTTCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIGTCPC*LEFHSE
Trigger: TTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCC...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGGCACATGTCCGTGCTaGCTTGAATTTCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTGTCPC*LEFHSE
Trigger: TTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACATGGGCACATGTCCGTaGTGCCTTGAATTTCACTCT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHMGTCP*CLEFHS
Trigger: AGAGTGAAATTCAAGGCAGCACGGACATGTGCCCAT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCTCCTGGATGTGCTTTaGTCTACAGCTGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGLLDVL*STAVFQ
Trigger: CTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCTTTCATTGCTGGGGTTaGCCAGACTGCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGFHCWG*PDCSDN
Trigger: GTTGTCACTGCAGTCTGGGCAACCCCAGCAATGAAA...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTTTCATTGCTGGGGTTaGCCAGACTGCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGFHCWG*PDCSDN
Trigger: GTTGTCACTGCAGTCTGGGCAACCCCAGCAATGAAA...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACTGTCCAGACTTCAGCTaGACCCAGCTTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHCPDFS*TQLRIC
Trigger: ACAGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACA...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AGTAGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTCGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRTLPGWSGFCIELDPIFVTSIF*YRSCRA
Trigger: GGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTAC...GAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAAGCTCGATTCTTTGCCTaGCCTTGCAGTGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKARFFA*PCSVVI
Trigger: GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGC...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTGCAGCTCGATTCTTTGCCTaGCCTTGCAGTGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: LPELHSDSDLLDSLPGLAARFFA*PCSVVI
Trigger: GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGC...TGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGGCTCGATTCTTTGCCTaGCCTTGCAGTGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWARFFA*PCSVVI
Trigger: GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGC...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGCTTCACTATGGCGCTaGTATGCGTCTGTTTATTGC +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTASLWR*YASVYC
Trigger: GCAATAAACAGACGCATACCAGCGCCATAGTGAAGC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAGCTTCACTATGGCGCTaGTATGCGTCTGTTTATTGC +
Preference number: 4 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPASLWR*YASVYC
Trigger: GCAATAAACAGACGCATACCAGCGCCATAGTGAAGC...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACTGTGGCTTCACTATaGCGCTGGTATGCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVTVASL*RWYASV
Trigger: AACAGACGCATACCAGCGCCATAGTGAAGCCACAGT...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCGCAATGTCTCCAAGGTaGACGAGGCAGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCAMSPR*TRQCWQ
Trigger: CTGCCAGCACTGCCTCGTCCACCTTGGAGACATTGC...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVERTLPG*SGFCIE
Trigger: CTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIRTLPG*SGFCIE
Trigger: CTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTAGTAGTAGAAAATTGTaGTCAGATGGTCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RGQAELHAYSRTLPGWSGSSRKL*SDGLLW
Trigger: CCAAAGGAGACCATCTGACCACAATTTTCTACTACT...ACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCAGTAGTAGAAAATTGTaGTCAGATGGTCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QGTVWASPANPTCHGLWSSSRKL*SDGLLW
Trigger: CCAAAGGAGACCATCTGACCACAATTTTCTACTACT...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTGGAGACCTTGACTGCTaGAAGAGGATAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIGDLDC*KRIGIV
Trigger: TACAATGCCTATCCTCTTCCAGCAGTCAAGGTCTCC...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGAGAGGTCCTCTTCATaGGGATGGAAACTATTCAGA +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEERSSS*GWKLFR
Trigger: TCTGAATAGTTTCCATCCCCATGAAGAGGACCTCTC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATTTGAAGGTAACCACTaGCTTCTCTCCTGTGTCACA +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARFEGNH*LLSCVT
Trigger: TGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAAA...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAGGGGATAACATATGTTaGGGGCGGAAACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQGDNIC*GRKPWP
Trigger: AGGCCAGGGTTTCCGCCCCCAACATATGTTATCCCC...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGGGGGATAACATATGTTaGGGGCGGAAACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEGDNIC*GRKPWP
Trigger: AGGCCAGGGTTTCCGCCCCCAACATATGTTATCCCC...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGCTGAAGAAAGGTTCCTaGGACAGAAACACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVLKKGS*DRNTSW
Trigger: CCAGCTGGTGTTTCTGTCCCAGGAACCTTTCTTCAG...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGGGATTATGGTTATATaGCTCCATGGGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNGIMVI*LHGKRL
Trigger: AAGCCTTTTCCCATGGAGCCATATAACCATAATCCC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACTACAGAGATGTTTCCTaGGGGGCCATTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHYRDVS*GAIEGL
Trigger: CAGTCCCTCAATGGCCCCCCAGGAAACATCTCTGTA...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTACAGAGATGTTTCCTaGGGGGCCATTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWYRDVS*GAIEGL
Trigger: CAGTCCCTCAATGGCCCCCCAGGAAACATCTCTGTA...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATATACAGAGATGTTTCCTaGGGGGCCATTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIYRDVS*GAIEGL
Trigger: CAGTCCCTCAATGGCCCCCCAGGAAACATCTCTGTA...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCATTGAATGATCTGAACTaGCAGGAAGTGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESLNDLN*QEVMET
Trigger: GGTCTCCATCACTTCCTGCCAGTTCAGATCATTCAA...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATAATGAGGAGACTGGCTaGCTGGTGTTGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHNEETG*LVLNDL
Trigger: CAGATCATTCAACACCAGCCAGCCAGTCTCCTCATT...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCTATCTGGAGTCCCAATaGGTCCAAAATTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVYLESQ*VQNWRM
Trigger: CATTCTCCAATTTTGGACCCATTGGGACTCCAGATA...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGTGCCAAACCCACCCATaGCTGGCTTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVCQTHP*LAYQFS
Trigger: GGAAAACTGATAAGCCAGCCATGGGTGGGTTTGGCA...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTGCCAAACCCACCCATaGCTGGCTTATCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWCQTHP*LAYQFS
Trigger: GGAAAACTGATAAGCCAGCCATGGGTGGGTTTGGCA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCTGCCACTCGGAGTGCTaGCCTGATGCCAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCCHSEC*PDANCS
Trigger: AGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCA...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAACTTTGGCCTCAGTGTaGAGGGTTCATGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVETLASV*RVHGAL
Trigger: CAAGGCACCATGAACCCTCCACACTGAGGCCAAAGT...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACCCCAGGTTGCCACTTTaGCCTCAGTGTGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHPRLPL*PQCGGF
Trigger: GAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGG...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGAAACCCAACATGCCATaGTTTATGGAGCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRKPNMP*FMEPSF
Trigger: GAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGCACTCAGCGGGCTGGTaGAATACTTACACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWHSAGW*NTYTLL
Trigger: CAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTG...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAAAGGGCATTCCCTGCTaGAGTCTCCTGGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRKGIPC*SLLARG
Trigger: TCCTCTGGCCAGGAGACTCCAGCAGGGAATGCCCTT...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTCACTGTATCCTCGATTaGGGCTCGAGCACCTACAGA +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGHCILD*GSSTYR
Trigger: TCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTG...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGACAACCCCTCCCCTCTaGGACAGCAGATGGGCACGT +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLTTPPL*DSRWAR
Trigger: ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGT...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAGACTGCAGTGACAACTaGGGCTCCTGGATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEDCSDN*GSWMCF
Trigger: AAAGCACATCCAGGAGCCCCAGTTGTCACTGCAGTC...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGCAGAGGGGAGCTCTTaGGGTCCTCAAACGGCATTC +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRAEGSS*GPQTAF
Trigger: GAATGCCGTTTGAGGACCCCAAGAGCTCCCCTCTGC...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000507469.5
CDS-3UTR CCA 90 bp CTAGGAACAGAGAAAGGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATATAGCAGTGACTCACTaGGCAGACACTGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGTEKGLPELHSDSDLLDIAVTH*ADTGPQ
Trigger: CTGGGGACCAGTGTCTGCCCAGTGAGTCACTGCTAT...ATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR TCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGAGAGAAAGGTTTGCCTaGACTTCACTCCGATTCGGA +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWRERFA*TSLRFG
Trigger: TCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCT...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAAGTCCATGGAGACCTTaGCTGCTGGAAGAGGATAGG +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQSPWRP*LLEEDR
Trigger: CCTATCCTCTTCCAGCAGTCAAGGTCTCCATGGACT...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAATGTTTCTTGCAGAATaGGGTTCTCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRMFLAE*GSLWLH
Trigger: GTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACAT...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGGGTGATGAATGGGGATaGACTGGGAGTTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWGDEWG*TGSYLL
Trigger: AAGCAAGTAACTCCCAGTTCATCCCCATTCATCACC...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCGACTGTGCTGTTGGCTaGGCTGGTAAAGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIADCAVG*AGKDVR
Trigger: CCTTACATCTTTACCAGCTCAGCCAACAGCACAGTC...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATACAGGAGGTTGCAATaGCGGCTCAAACAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARYRRLQ*RLKQFY
Trigger: ATAAAACTGTTTGAGCCGTCATTGCAACCTCCTGTA...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTGGGACCTTGACTTCTaGGGGATTATGGTTATATGG +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHWDLDF*GIMVIW
Trigger: CCATATAACCATAATCCCTCAGAAGTCAAGGTCCCA...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAGAATTCTGGGACCTTaGCTTCTGAGGGATTATGGT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHRILGP*LLRDYG
Trigger: ACCATAATCCCTCAGAAGTCAAGGTCCCAGAATTCT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACAGGATGAATGTGACATaGGCTCTGAGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHRMNVT*ALRASP
Trigger: TGGAGAAGCCCTCAGAGCTCATGTCACATTCATCCT...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTTTTGGGTATCTTTCCTaGTTGAGAGAGAATCCGGTG +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIFGYLS*LRENPV
Trigger: CACCGGATTCTCTCTCAATCAGGAAAGATACCCAAA...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGGCCATTGAGGGACTaGGTTCTGCTTTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLGPLRD*VLLWSW
Trigger: CCAGCTCCAAAGCAGAACTCAGTCCCTCAATGGCCC...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTCCTACCAGAGCCTTCTaGCAGGCCTTGAACTCTCCC +
Preference number: 4 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCPTRAF*QALNSP
Trigger: GGGAGAGTTCAAGGCCTGTCAGAAGGCTCTGGTAGG...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGGTTTTCTTCTGTGCCTaGTGGGCACATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLVFFCA*WAHVRA
Trigger: AGCACGGACATGTGCCCATCAGGCACAGAAGAAAAC...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAACTCTCTGAAGAGCAATaGGCGTTATCTCACCCCTTT +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKLSEEQ*ALSHPF
Trigger: AAAGGGGTGAGATAACGCTCATTGCTCTTCAGAGAG...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAACACAGGGAAGGGGCTaGAGAGAAGCACAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGITQGRG*REAQKV
Trigger: AACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGT...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGAATGTTGCAGCTGCCTaGATGCAGAGCTCAAACACA +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWNVAAA*MQSSNT
Trigger: TGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATT...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGGGCGCAAGAATCAGTaGCAGTTCAAACACTGGAAT +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHGRKNQ*QFKHWN
Trigger: ATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACTTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHFWYRS*RACLDV
Trigger: GACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAA...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACATTTGCTCGATTCTTTaGCTGGCCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHICSIL*LALQCC
Trigger: ACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAAT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTCAGGGAACAGAGAAAGGTTTaGCTGAACTTCACTCCGATT +
Preference number: 4 (lower is better)
Translates to: RTLPGWSGFCIELDPIFREQRKV*LNFTPI
Trigger: AATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTC...CCTGAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAACAGAGAAAGGTTTaGCTGAACTTCACTCCGATT +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESEQRKV*LNFTPI
Trigger: AATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGAACAGAGAAAGGTTTaGCTGAACTTCACTCCGATT +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEEQRKV*LNFTPI
Trigger: AATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGCCTATAGTAGGACTCTaGCTGGCTGGTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWPIVGL*LAGLVS
Trigger: AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGG...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCGGAACTTCACAGCAATaGTTCTGCAGTAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVGTSQQ*FCSSRK
Trigger: TTTTCTACTACTGCAGAAGCATTGCTGTGAAGTTCC...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAATCTGTTATCAGCCATaGTGTAGGAAGAATCCCAGT +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARICYQP*CRKNPS
Trigger: ACTGGGATTCTTCCTACAGCATGGCTGATAACAGAT...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGGTGACCGTTTGCCCCTaGGGTCTATGTTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEVTVCP*GLCLLA
Trigger: AGCAAGCAAACATAGACCGCAGGGGCAAACGGTCAC...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACCTGGGTACAGGATCCTaGTCTGGACGGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHLGTGS*SGRKTP
Trigger: AGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAG...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGCTGAGAGATAATCAATaGCAAACCCACCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWLRDNQ*QTHPWL
Trigger: CAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAG...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACTGCTGCATTAACAGCTaGTCCAGAGCAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHCCINS*SRAEGP
Trigger: TGGACCTTCTGCTCTGGAGCAGCTGTTAATGCAGCA...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAATGCTGTTTCTGCTTCTaGTGCATTAACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKCCFCF*CINSCS
Trigger: GGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCA...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCGTGGAGGGTTCATGGTaGCTTGTCCCCGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCVEGSW*LVPVAV
Trigger: AACAGCAACGGGGACAAGGCACCATGAACCCTCCAC...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGACCTTCATTCCCAGGTTaGCACTTTGGCCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRPSFPG*HFGLSV
Trigger: CACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGG...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCCTGCAAACCCAACATaGCATGGTTTATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGPANPT*HGLWSL
Trigger: AAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAACCTGCAAACCCAACATaGCATGGTTTATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKPANPT*HGLWSL
Trigger: AAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGG...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCCCTGCAAACCCAACATaGCATGGTTTATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGPANPT*HGLWSL
Trigger: AAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGG...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAGAACGGGGCTTTCCTTaGTACACACTGACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEERGFP*YTLTRS
Trigger: GCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTC...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATATGGACCCCATGCTGTTaGTTCTTGGGGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIWTPCC*FLGRCD
Trigger: ATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCA...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGACCCCATGCTGTTaGTTCTTGGGGAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWWTPCC*FLGRCD
Trigger: ATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCA...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAAACTGCTGGACCCCATaGTGTTGCTTCTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRNCWTP*CCFLGR
Trigger: TCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGTT...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTAGGCACATGTCCGTGCTaGCTTGAATTTCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLGTCPC*LEFHSE
Trigger: TTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCC...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCTTTCATTGCTGGGGTTaGCCAGACTGCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIFHCWG*PDCSDN
Trigger: GTTGTCACTGCAGTCTGGGCAACCCCAGCAATGAAA...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCAAAAGGTTTCATATTaGCATTGGGTAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIQKVSY*HWVGGF
Trigger: GAAGCCCCCTACCCAATGGCAATATGAAACCTTTTG...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCTGGAATGTTGCAGCTaGCTGAATGCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGLECCS*LNAELK
Trigger: TTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGCTGGAATGTTGCAGCTaGCTGAATGCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWLECCS*LNAELK
Trigger: TTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAG...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCAAACACTGGAATGTTaGAGCTGCCTGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGQTLEC*SCLNAE
Trigger: CTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTGGACCCCATGCTGTTaGTTCTTTAGGCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGWTPCC*FFRLSM
Trigger: CATGGAAAGCCTAAAGAAGCAACAGCATGGGGTCCA...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507469.5
CDS-3UTR CCA 90 bp TCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTGCAGTGTTGTGATCTGTCCAGACTTCAGCTaGACCCAGCTTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: SLRFGFARFFAWPCSVVICPDFS*TQLRIC
Trigger: ACAGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACA...GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CCA 90 bp GCCTTGCAGTGTTGTGATCTGATTCTTAAAGGCGTGATTCCAGCTGAAAACAAACCTGCAGAGCCTGCCTaGATGTCCAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALQCCDLILKGVIPAENKPAEPA*MSRLQL
Trigger: CAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGG...TTTGTTTTCAGCTGGAATCACGCCTTTAAGAATCAGATCACAACACTGCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHVTSIF*YRSCRA
Trigger: GGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTAC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTTCTCTGATAATTCCCAATTaGGAAGACTTCACACGGCAT +
Preference number: 4 (lower is better)
Translates to: DKLSCMPIVGLCLAGLVSLIIPN*EDFTRH
Trigger: ATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAG...AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCACTGATAATTCCCAATTaGGAAGACTTCACACGGCAT +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESLIIPN*EDFTRH
Trigger: ATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAG...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCACTGTGGCTTCACTATaGCGCTGGTATGCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGITVASL*RWYASV
Trigger: AACAGACGCATACCAGCGCCATAGTGAAGCCACAGT...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTACTGTGGCTTCACTATaGCGCTGGTATGCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGTVASL*RWYASV
Trigger: AACAGACGCATACCAGCGCCATAGTGAAGCCACAGT...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGGAGACCTTGACTGCTaGAAGAGGATAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHGDLDC*KRIGIV
Trigger: TACAATGCCTATCCTCTTCCAGCAGTCAAGGTCTCC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTCCTCTTCATGGGGATaGAAACTATTCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNSSSWG*KLFRRE
Trigger: TTCTCTTCTGAATAGTTTCCATCCCCATGAAGAGGA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAGAGAGGTCCTCTTCATaGGGATGGAAACTATTCAGA +
Preference number: 4 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPERSSS*GWKLFR
Trigger: TCTGAATAGTTTCCATCCCCATGAAGAGGACCTCTC...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCCGTATTCGTCGTTGCTaGCCTTCTTTGTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIARIRRC*PSLSPV
Trigger: TACAGGGGACAAAGAAGGCCAGCAACGACGAATACG...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCGTATTCGTCGTTGCTaGCCTTCTTTGTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIRIRRC*PSLSPV
Trigger: TACAGGGGACAAAGAAGGCCAGCAACGACGAATACG...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGATTACAGGTGTTTTTCTaGCTTCAGACACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRLQVFF*LQTLES
Trigger: AGACTCCAGTGTCTGAAGCCAGAAAAACACCTGTAA...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGTTACTTGCTTGAGTTaGGGTTTGAGTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESVTCLS*GLSYRC
Trigger: ACACCTGTAACTCAAACCCCAACTCAAGCAAGTAAC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTGAAGAAAGGTTCCTaGGACAGAAACACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGILKKGS*DRNTSW
Trigger: CCAGCTGGTGTTTCTGTCCCAGGAACCTTTCTTCAG...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACCACCTGGTTTCCTGCTaGAGAGTGAGCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHHLVSC*RVSCRL
Trigger: CAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTG...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACGCTCAAACAGTTTTATaGGGTCTTGGGTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHAQTVL*GLGSEG
Trigger: ACCTTCAGACCCAAGACCCCATAAAACTGTTTGAGC...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGGGGATTATGGTTATATaGCTCCATGGGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLGIMVI*LHGKRL
Trigger: AAGCCTTTTCCCATGGAGCCATATAACCATAATCCC...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTACTTCTGAGGGATTATaGTTATATGGCTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGTSEGL*LYGSMG
Trigger: TCCCATGGAGCCATATAACCATAATCCCTCAGAAGT...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGTACAGAGATGTTTCCTaGGGGGCCATTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLYRDVS*GAIEGL
Trigger: CAGTCCCTCAATGGCCCCCCAGGAAACATCTCTGTA...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGAATGGAACAGAATTATaGTTGTGTGTTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRNGTEL*LCVGGE
Trigger: CTCTCCTCCAACACACAACCATAATTCTGTTCCATT...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTCAATGGGTCCAAAATTaGAGAATGGAACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCQWVQN*RMEQNY
Trigger: ATAATTCTGTTCCATTCTCCAATTTTGGACCCATTG...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGTATCTGGAGTCCCAATaGGTCCAAAATTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEYLESQ*VQNWRM
Trigger: CATTCTCCAATTTTGGACCCATTGGGACTCCAGATA...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATAAACCCACCCATGGCTaGCTTATCAGTTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNKPTHG*LISFPP
Trigger: CGGTGGAAAACTGATAAGCCAGCCATGGGTGGGTTT...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTGCCACTCGGAGTGCTaGCCTGATGCCAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLCHSEC*PDANCS
Trigger: AGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAACTTTGGCCTCAGTGTaGAGGGTTCATGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRTLASV*RVHGAL
Trigger: CAAGGCACCATGAACCCTCCACACTGAGGCCAAAGT...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAACTAGCATACAGCATTaGGTAAAAGAAGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRTSIQH*VKEGME
Trigger: CTCCATCCCTTCTTTTACCCAATGCTGTATGCTAGT...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAGACAACTGGGGCTCCTaGATGTGCTTTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQDNWGS*MCFALQ
Trigger: CTGTAGAGCAAAGCACATCCAGGAGCCCCAGTTGTC...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGTTTCATATTGCCATTaGGTAGGGGGCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTVSYCH*VGGFTF
Trigger: AAAGGTGAAGCCCCCTACCCAATGGCAATATGAAAC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGCTTTAGATAGGAGCTaGGTATTACTGGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTALDRS*VLLGVR
Trigger: TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCGGGATTTTACCTCTTTaGGAGGAAAACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVGILPL*EENFFL
Trigger: AAGGAAGAAGTTTTCCTCCCAAAGAGGTAAAATCCC...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGTCCAGACTTCAGCTaGACCCAGCTTAGAATCGGA +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWCPDFS*TQLRIG
Trigger: TCCGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACA...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508461.5
CDS-3UTR CCA 90 bp GAGAAAGGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTTCACTGGGCAGACACTaGTCCCCAGATCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: EKGLPELHSDSDLLDSLPSLGRH*SPDPVL
Trigger: TAGAACAGGATCTGGGGACCAGTGTCTGCCCAGTGA...AGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR TCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTTACTCAGGTACACATaGCCGTGGAATTTAATAAAG +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNLLRYT*PWNLIK
Trigger: CTTTATTAAATTCCACGGTCATGTGTACCTGAGTAA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGTGTCGCACTAATACTTaGGAGGTCCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEECRTNT*EVLFMG
Trigger: CCCCATGAAGAGGACCTCTCAAGTATTAGTGCGACA...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAATGTTTCTTGCAGAATaGGGTTCTCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPMFLAE*GSLWLH
Trigger: GTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACAT...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATCTCGGAGTGCTGGCCTaGTGCCAACTGCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDLGVLA*CQLLSE
Trigger: CTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAG...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTATACTTACACCCTCTTaGCAGCGAGAAACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIILTPS*QRETEK
Trigger: CTTTTCTGTTTCTCGCTGTCAAGAGGGTGTAAGTAT...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCTTCCTTGCTACACACTaGCTAGAAGCACACCTGTGT +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIFLATH*LEAHLC
Trigger: ACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAA...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCTCTCTGAAGAGCAATaGGCGTTATCTCACCCCTTT +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNLSEEQ*ALSHPF
Trigger: AAAGGGGTGAGATAACGCTCATTGCTCTTCAGAGAG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATTCCAACCACTCTCTCTaGAGAGCAATGAGCGTTATC +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNSNHSL*RAMSVI
Trigger: GATAACGCTCATTGCTCTTCAGAGAGAGTGGTTGGA...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGACACAGGGAAGGGGCTaGAGAGAAGCACAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEETQGRG*REAQKV
Trigger: AACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGT...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGACACAGGGAAGGGGCTaGAGAGAAGCACAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLTQGRG*REAQKV
Trigger: AACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGT...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTATTTGCTCGATTCTTTaGCTGGCCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GLPELHSDSDLLDSLPGLICSIL*LALQCC
Trigger: ACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAAT...AAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR GCA 90 bp CTAGGAACAGAGAAAGGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATACTCCGATTCGGATTTaGTCGATTCTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGTEKGLPELHSDSDLLDTPIRI*SILCLA
Trigger: GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGT...ATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR GCA 90 bp AGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTCAGGGGAACTTCACAGCAATaGTTCTGCAGTAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: RTLPGWSGFCIELDPIFRGTSQQ*FCSSRK
Trigger: TTTTCTACTACTGCAGAAGCATTGCTGTGAAGTTCC...CCTGAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCATGGAGACCTTGACTaGTGGAAGAGGATAGGCATT +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNHGDLD*WKRIGI
Trigger: AATGCCTATCCTCTTCCAGCAGTCAAGGTCTCCATG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAACATGGAGACCTTGACTaGTGGAAGAGGATAGGCATT +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEHGDLD*WKRIGI
Trigger: AATGCCTATCCTCTTCCAGCAGTCAAGGTCTCCATG...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCTCTTTCATCCACCACTaGCTCCTGAAAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCSFIHH*LLKDPG
Trigger: CCCAGGGTCTTTCAGGAGGCAGTGGTGGATGAAAGA...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGTGTCGTATTCGTCGTTaGTGGCCTTCTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLCRIRR*WPSLSP
Trigger: AGGGGACAAAGAAGGCCAGCAACGACGAATACGACA...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGTCGTATTCGTCGTTaGTGGCCTTCTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRCRIRR*WPSLSP
Trigger: AGGGGACAAAGAAGGCCAGCAACGACGAATACGACA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGATAGAGATCAAGCGTTaGTGTCGTATTCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGIEIKR*CRIRRC
Trigger: GCAACGACGAATACGACAGCAACGCTTGATCTCTAT...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTTACAGTTATTCCTTTaGTATAGTCCCTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNLQLFL*YSPFSP
Trigger: AGGTGAGAAGGGACTATAGCAAAGGAATAACTGTAA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000508461.5
CDS-3UTR GCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCGAACTGGGAGTTACTTaGTTGAGTTGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGELGVT*LSWGLS
Trigger: ACTCAAACCCCAACTCAAGCAAGTAACTCCCAGTTC...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGAACTGGGAGTTACTTaGTTGAGTTGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHELGVT*LSWGLS
Trigger: ACTCAAACCCCAACTCAAGCAAGTAACTCCCAGTTC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAAAAGATGTAAGGGGTTaGTGGGAAGGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEKDVRG*WEGGCD
Trigger: ATCACAGCCACCTTCCCAGCAACCCCTTACATCTTT...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCAAAGATGTAAGGGGTTaGTGGGAAGGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIAKDVRG*WEGGCD
Trigger: ATCACAGCCACCTTCCCAGCAACCCCTTACATCTTT...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTGCATTACAGGAGGTTaGAATGACGGCTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGCITGG*NDGSNS
Trigger: ACTGTTTGAGCCGTCATTGCAACCTCCTGTAATGCA...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCTGCATTACAGGAGGTTaGAATGACGGCTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGCITGG*NDGSNS
Trigger: ACTGTTTGAGCCGTCATTGCAACCTCCTGTAATGCA...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCTCTAGAGGCTGCTGCTaGATTACAGGAGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGISRGCC*ITGGCN
Trigger: ATTGCAACCTCCTGTAATGCAGCAGCAGCCTCTAGA...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATATCTAGAGGCTGCTGCTaGATTACAGGAGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGISRGCC*ITGGCN
Trigger: ATTGCAACCTCCTGTAATGCAGCAGCAGCCTCTAGA...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTATCTGTTATCAGCCATaGTGTAGGAAGAATCCCAGT +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIICYQP*CRKNPS
Trigger: ACTGGGATTCTTCCTACAGCATGGCTGATAACAGAT...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGCCTGCGGTCTATGTTTaGTTGCTGTGCCATTACAGA +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWPAVYV*LLCHYR
Trigger: TCTGTAATGGCACAGCAAGCAAACATAGACCGCAGG...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCTGCGGTCTATGTTTaGTTGCTGTGCCATTACAGA +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIPAVYV*LLCHYR
Trigger: TCTGTAATGGCACAGCAAGCAAACATAGACCGCAGG...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCCTGCGGTCTATGTTTaGTTGCTGTGCCATTACAGA +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNPAVYV*LLCHYR
Trigger: TCTGTAATGGCACAGCAAGCAAACATAGACCGCAGG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCTGAGAGATAATCAATaGCAAACCCACCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNLRDNQ*QTHPWL
Trigger: CAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGTGCCACTCGGAGTaGTGGCCTGATGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDRCHSE*WPDANC
Trigger: GCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCT...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGCCCCGTTGCTGTTTCTaGTTCTGCTGCATTAACAGC +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEPRCCF*FCCINS
Trigger: GCTGTTAATGCAGCAGAAGCAGAAACAGCAACGGGG...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACCTGCAAACCCAACATaGCATGGTTTATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIPANPT*HGLWSL
Trigger: AAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGG...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTACTGCGAACATTTCGTaGACACTCAGCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCTANIS*TLSGLV
Trigger: CACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGT...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATTGGCTTCTCCCATCTaGCTTCCCTTCTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRLASPI*LPFSAF
Trigger: GAAAGCTGAGAAGGGAAGGCAGATGGGAGAAGCCAA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATATGGGCACATGTCCGTaGTGCCTTGAATTTCACTCT +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNMGTCP*CLEFHS
Trigger: AGAGTGAAATTCAAGGCAGCACGGACATGTGCCCAT...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGACTCCTGGATGTGCTTTaGTCTACAGCTGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRLLDVL*STAVFQ
Trigger: CTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAG...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTGGAATGTTGCAGCTaGCTGAATGCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGILECCS*LNAELK
Trigger: TTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAG...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCAAACACTGGAATGTTaGAGCTGCCTGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIQTLEC*SCLNAE
Trigger: CTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTG...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCAAACACTGGAATGTTaGAGCTGCCTGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNQTLEC*SCLNAE
Trigger: CTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATTGTCCAGACTTCAGCTaGACCCAGCTTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNCPDFS*TQLRIC
Trigger: ACAGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACA...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHVTSIF*YRSCRA
Trigger: GGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTAC...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGVTSIF*YRSCRA
Trigger: GGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTAC...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGGCTCGATTCTTTGCCTaGCCTTGCAGTGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLARFFA*PCSVVI
Trigger: GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGC...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTGCAGCTGATAATTCCCAATTaGGAAGACTTCACACGGCAT +
Preference number: 4 (lower is better)
Translates to: CLNFTPIRICSILCLALQLIIPN*EDFTRH
Trigger: ATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAG...CTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCGCTTCACTATGGCGCTaGTATGCGTCTGTTTATTGC +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIAASLWR*YASVYC
Trigger: GCAATAAACAGACGCATACCAGCGCCATAGTGAAGC...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAACAGGAGCTAGACTGTaGCTTCACTATGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRTGARL*LHYGAG
Trigger: ACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGT...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCRTLPG*SGFCIE
Trigger: CTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAG +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHRTLPG*SGFCIE
Trigger: CTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCT...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATATAAGGCTGACCATTaGAGGGGACAAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRYKADH*RGQAEL
Trigger: CAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAAAAATTGTGGTCAGATaGTCTCCTTTGGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESKIVVR*SPLEEA
Trigger: AGCTTCTTCCAAAGGAGACCATCTGACCACAATTTT...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAAAATTGTGGTCAGATaGTCTCCTTTGGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSCMPIVGLCLAGLVSVSKIVVR*SPLEEA
Trigger: AGCTTCTTCCAAAGGAGACCATCTGACCACAATTTT...CGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CCA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATCCTCTTCATGGGGATaGAAACTATTCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARSSSWG*KLFRRE
Trigger: TTCTCTTCTGAATAGTTTCCATCCCCATGAAGAGGA...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGGAGAGGTCCTCTTCATaGGGATGGAAACTATTCAGA +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGERSSS*GWKLFR
Trigger: TCTGAATAGTTTCCATCCCCATGAAGAGGACCTCTC...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATACACTGAATCAGCCTTaGCTGATTATCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHTLNQP*LIISNP
Trigger: TGGATTGCTGATAATCAGCCAAGGCTGATTCAGTGT...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGTCTCTTTGGCTTCACTaGGGTCTTCCAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSESLWLH*GLPVLI
Trigger: AATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGA...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAATTTGAAGGTAACCACTaGCTTCTCTCCTGTGTCACA +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKFEGNH*LLSCVT
Trigger: TGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAAA...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACGTTACTTGCTTGAGTTaGGGTTTGAGTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHVTCLS*GLSYRC
Trigger: ACACCTGTAACTCAAACCCCAACTCAAGCAAGTAAC...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGACTGAAGAAAGGTTCCTaGGACAGAAACACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRLKKGS*DRNTSW
Trigger: CCAGCTGGTGTTTCTGTCCCAGGAACCTTTCTTCAG...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTCACCTGGTTTCCTGCTaGAGAGTGAGCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCHLVSC*RVSCRL
Trigger: CAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTG...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCACCTGGTTTCCTGCTaGAGAGTGAGCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLHLVSC*RVSCRL
Trigger: CAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGATTCCACAGCTGTTTaGAGGCATCTGCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNDSTAV*RHLPVD
Trigger: ATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATC...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGGCTCAAACAGTTTTATaGGGTCTTGGGTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGAQTVL*GLGSEG
Trigger: ACCTTCAGACCCAAGACCCCATAAAACTGTTTGAGC...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGTTCTGCTTTGGAGCTaGATGTCAGGTTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHVLLWS*MSGFSH
Trigger: ATGGGAAAAACCTGACATCCAGCTCCAAAGCAGAAC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAAGTTCTGCTTTGGAGCTaGATGTCAGGTTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKVLLWS*MSGFSH
Trigger: ATGGGAAAAACCTGACATCCAGCTCCAAAGCAGAAC...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGGTTCTGCTTTGGAGCTaGATGTCAGGTTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGVLLWS*MSGFSH
Trigger: ATGGGAAAAACCTGACATCCAGCTCCAAAGCAGAAC...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCTTGAATGATCTGAACTaGCAGGAAGTGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGLNDLN*QEVMET
Trigger: GGTCTCCATCACTTCCTGCCAGTTCAGATCATTCAA...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATAATGAGGAGACTGGCTaGCTGGTGTTGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNNEETG*LVLNDL
Trigger: CAGATCATTCAACACCAGCCAGCCAGTCTCCTCATT...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTTATCTGGAGTCCCAATaGGTCCAAAATTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIYLESQ*VQNWRM
Trigger: CATTCTCCAATTTTGGACCCATTGGGACTCCAGATA...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTATCTATCCCTGTTATCTaGAGTCCCAATGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLSIPVI*SPNGSK
Trigger: TTTGGACCCATTGGGACTCCAGATAACAGGGATAGA...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTCTATCCCTGTTATCTaGAGTCCCAATGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHSIPVI*SPNGSK
Trigger: TTTGGACCCATTGGGACTCCAGATAACAGGGATAGA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGTCHGL*SLHSQV
Trigger: AACCTGGGAATGAAGGCTCCATAAACCATGGCATGT...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATAAACCCAACATGCCATaGTTTATGGAGCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHKPNMP*FMEPSF
Trigger: GAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCACTTCCCATGTGGCTaGGGACATGCACGATGGAGA +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLHFPCG*GHARWR
Trigger: TCTCCATCGTGCATGTCCCCAGCCACATGGGAAGTG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGGGGTGGGAAGTAGAATaGGGGCACAAAAACCAACCA +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEGWEVE*GHKNQP
Trigger: TGGTTGGTTTTTGTGCCCCCATTCTACTTCCCACCC...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGACTGCAGTGACAACTaGGGCTCCTGGATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRDCSDN*GSWMCF
Trigger: AAAGCACATCCAGGAGCCCCAGTTGTCACTGCAGTC...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTGGGATTTTACCTCTTTaGGAGGAAAACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGGILPL*EENFFL
Trigger: AAGGAAGAAGTTTTCCTCCCAAAGAGGTAAAATCCC...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCCCTCAAACGGCATTCTaGGTACAGGATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCPQTAF*VQDPAL
Trigger: CAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGG...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000508461.5
CDS-3UTR TCA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTTACTCAGGTACACATaGCCGTGGAATTTAATAAAG +
Preference number: 4 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLLLRYT*PWNLIK
Trigger: CTTTATTAAATTCCACGGTCATGTGTACCTGAGTAA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTTACTCAGGTACACATaGCCGTGGAATTTAATAAAG +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGLLRYT*PWNLIK
Trigger: CTTTATTAAATTCCACGGTCATGTGTACCTGAGTAA...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAACCTGTAATACCCTGGTaGCCTTTGGAAAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEPVIPW*PLEKSK
Trigger: CTTGGATTTTTCCAAAGGTCACCAGGGTATTACAGG...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCGACTGTGCTGTTGGCTaGGCTGGTAAAGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCDCAVG*AGKDVR
Trigger: CCTTACATCTTTACCAGCTCAGCCAACAGCACAGTC...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTACAGGAGGTTGCAATaGCGGCTCAAACAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWYRRLQ*RLKQFY
Trigger: ATAAAACTGTTTGAGCCGTCATTGCAACCTCCTGTA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACAGGATGAATGTGACATaGGCTCTGAGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHRMNVT*ALRASP
Trigger: TGGAGAAGCCCTCAGAGCTCATGTCACATTCATCCT...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATTTGGGTATCTTTCCTaGTTGAGAGAGAATCCGGTG +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEFGYLS*LRENPV
Trigger: CACCGGATTCTCTCTCAATCAGGAAAGATACCCAAA...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGAACATTTCCACTGGCTaGAGAGGTCGGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLNISTG*RGRFPI
Trigger: GATGGGGAACCGACCTCTTCAGCCAGTGGAAATGTT...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCCGAGCACCTACAGAGTaGAGGGCATTCCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSRAPTE*RAFPAG
Trigger: TCCAGCAGGGAATGCCCTTCACTCTGTAGGTGCTCG...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCCTAGCCTGCCTTCTGTaGGACTGCTTGCTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSLACLL*DCLLCD
Trigger: GTCGCACAGCAAGCAGTCTCACAGAAGGCAGGCTAG...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATTTGCCCAGACTGCAGTaGCAACTGGGGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDLPRLQ*QLGLLD
Trigger: ATCCAGGAGCCCCAGTTGTCACTGCAGTCTGGGCAA...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGCTCTCTGAAGAGCAATaGGCGTTATCTCACCCCTTT +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEELSEEQ*ALSHPF
Trigger: AAAGGGGTGAGATAACGCTCATTGCTCTTCAGAGAG...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAACACAGGGAAGGGGCTaGAGAGAAGCACAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRTQGRG*REAQKV
Trigger: AACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGT...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACGTTTTCTCCCACAATaGCTATCTGCAAGAACATCC +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIRFLPQ*LSARTS
Trigger: GGATGTTCTTGCAGATAGTCATTGTGGGAGAAAACG...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367537.7
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCATTTGCTCGATTCTTTaGCTGGCCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIICSIL*LALQCC
Trigger: ACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAAT...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTATTTGCTCGATTCTTTaGCTGGCCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGICSIL*LALQCC
Trigger: ACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAAT...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCCGATTCGGATTTaGTCGATTCTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHTPIRI*SILCLA
Trigger: GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGT...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACACTATGGCGCTGGTATaGGTCTGTTTATTGCTGATA +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHTMALV*VCLLLI
Trigger: TATCAGCAATAAACAGACGCATACCAGCGCCATAGT...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTGGGGACAAGCTGAGCTaGATGCCTATAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCGDKLS*MPIVGL
Trigger: GAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCC...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAGGAACTTCACAGCAATaGTTCTGCAGTAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTGTSQQ*FCSSRK
Trigger: TTTTCTACTACTGCAGAAGCATTGCTGTGAAGTTCC...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATATAGAGATCAAGCGTTaGTGTCGTATTCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNIEIKR*CRIRRC
Trigger: GCAACGACGAATACGACAGCAACGCTTGATCTCTAT...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAGTCTGGGATTTTACCTaGACTGCCACATTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIVWDFT*TATFCF
Trigger: AAAGCAGAATGTGGCAGTGCAGGTAAAATCCCAGAC...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000508461.5
CDS-3UTR GCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTTGCATTACAGGAGGTTaGAATGACGGCTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGCITGG*NDGSNS
Trigger: ACTGTTTGAGCCGTCATTGCAACCTCCTGTAATGCA...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAAGTTTTCCACCGATCTaGAGTCCTTCTATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGISFPPI*SPSIPV
Trigger: AACAGGGATAGAAGGACTGCAGATCGGTGGAAAACT...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCAGTTTTCCACCGATCTaGAGTCCTTCTATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIASFPPI*SPSIPV
Trigger: AACAGGGATAGAAGGACTGCAGATCGGTGGAAAACT...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGCAGAAGGTCCAGGATaGATCATGGAACTGGACCAG +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLAEGPG*IMELDQ
Trigger: CTGGTCCAGTTCCATGATGCATCCTGGACCTTCTGC...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACATTCTTTTTGTTGCACTaGGAACATTTCGTGCACACT +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTFFLLH*EHFVHT
Trigger: AGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTTTCTTTTTGTTGCACTaGGAACATTTCGTGCACACT +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIFFLLH*EHFVHT
Trigger: AGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCGATTTTTCTTTTTGTTaGACTGCGAACATTTCGTGC +
Preference number: 4 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGDFSFC*TANISC
Trigger: GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATC...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGATTTTTCTTTTTGTTaGACTGCGAACATTTCGTGC +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESDFSFC*TANISC
Trigger: GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGGGCACATGTCCGTGCTaGCTTGAATTTCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLGTCPC*LEFHSE
Trigger: TTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCC...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACTCGTGTTTTCTTCTGTaGCTGATGGGCACATGTCCG +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHSCFLL*LMGTCP
Trigger: CGGACATGTGCCCATCAGGCACAGAAGAAAACACGA...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACCAAAAGGTTTCATATTaGCATTGGGTAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHQKVSY*HWVGGF
Trigger: GAAGCCCCCTACCCAATGGCAATATGAAACCTTTTG...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAAACTGCTGGACCCCATaGTGTTGCTTCTTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQNCWTP*CCFFRL
Trigger: AAGCCTAAAGAAGCAACAGCATGGGGTCCAGCAGTT...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507469.5
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCGCTCGATTCTTTGCCTaGCCTTGCAGTGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCARFFA*PCSVVI
Trigger: GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGC...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAGCTTCACTATGGCGCTaGTATGCGTCTGTTTATTGC +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQASLWR*YASVYC
Trigger: GCAATAAACAGACGCATACCAGCGCCATAGTGAAGC...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACTGTGGCTTCACTATaGCGCTGGTATGCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCTVASL*RWYASV
Trigger: AACAGACGCATACCAGCGCCATAGTGAAGCCACAGT...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGATCTGCCTGGCTGGTCTaGTTTCTGTATCGAGCAATG +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRSAWLV*FLYRAM
Trigger: CATTGCTCGATACAGAAACCAGACCAGCCAGGCAGA...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGAGTTGAAAGCTTTTTaGAATAGCAGCCTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEELKAF*NSSLLN
Trigger: GTTTAAGAGGCTGCTATTCCAAAAAGCTTTCAACTC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAGTTGAAAGCTTTTTaGAATAGCAGCCTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESELKAF*NSSLLN
Trigger: GTTTAAGAGGCTGCTATTCCAAAAAGCTTTCAACTC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCGAGAGGTCCTCTTCATaGGGATGGAAACTATTCAGA +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIERSSS*GWKLFR
Trigger: TCTGAATAGTTTCCATCCCCATGAAGAGGACCTCTC...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACCGTATTCGTCGTTGCTaGCCTTCTTTGTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHRIRRC*PSLSPV
Trigger: TACAGGGGACAAAGAAGGCCAGCAACGACGAATACG...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACACACTGAATCAGCCTTaGCTGATTATCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHTLNQP*LIISNP
Trigger: TGGATTGCTGATAATCAGCCAAGGCTGATTCAGTGT...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACTCTCTTTGGCTTCACTaGGGTCTTCCAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHSLWLH*GLPVLI
Trigger: AATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGA...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAATTTCTTAGTTCTGTCTaGGATTTTACCTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKFLSSV*DFTCTA
Trigger: GGCAGTGCAGGTAAAATCCCAGACAGAACTAAGAAA...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347615.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTTACAGGTGTTTTTCTaGCTTCAGACACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGLQVFF*LQTLES
Trigger: AGACTCCAGTGTCTGAAGCCAGAAAAACACCTGTAA...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGTTACTTGCTTGAGTTaGGGTTTGAGTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHVTCLS*GLSYRC
Trigger: ACACCTGTAACTCAAACCCCAACTCAAGCAAGTAAC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCGCTCAAACAGTTTTATaGGGTCTTGGGTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIAQTVL*GLGSEG
Trigger: ACCTTCAGACCCAAGACCCCATAAAACTGTTTGAGC...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGATCTCAAACGGCATTCTaGGTACAGGATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRSQTAF*VQDPAL
Trigger: CAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGA...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAATGGAACAGAATTATaGTTGTGTGTTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHNGTEL*LCVGGE
Trigger: CTCTCCTCCAACACACAACCATAATTCTGTTCCATT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTATCTGGAGTCCCAATaGGTCCAAAATTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGYLESQ*VQNWRM
Trigger: CATTCTCCAATTTTGGACCCATTGGGACTCCAGATA...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGTCHGL*SLHSQV
Trigger: AACCTGGGAATGAAGGCTCCATAAACCATGGCATGT...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGAAACCCAACATGCCATaGTTTATGGAGCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWKPNMP*FMEPSF
Trigger: GAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGACTAGCATACAGCATTaGGTAAAAGAAGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGTSIQH*VKEGME
Trigger: CTCCATCCCTTCTTTTACCCAATGCTGTATGCTAGT...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTCGTCTCTTCCAAAATaGACGACGTCGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHSSLPK*TTSCFL
Trigger: AAGAAAACACGACGTCGTCCATTTTGGAAGAGACGA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGACAACTGGGGCTCCTaGATGTGCTTTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLDNWGS*MCFALQ
Trigger: CTGTAGAGCAAAGCACATCCAGGAGCCCCAGTTGTC...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACGTTTCATATTGCCATTaGGTAGGGGGCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHVSYCH*VGGFTF
Trigger: AAAGGTGAAGCCCCCTACCCAATGGCAATATGAAAC...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGGCTTTAGATAGGAGCTaGGTATTACTGGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWALDRS*VLLGVR
Trigger: TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGC...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
3UTR CAA 72 bp GGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTaGCAGCTGCCTGAATGCAGAGCTCAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: GARISDSSNTGM*QLPECRAQTHK
Trigger: TTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACAGAGAAAGGTTTGCCTaGACTTCACTCCGATTCGGA +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHRERFA*TSLRFG
Trigger: TCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCT...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGCTAACTGCTGAGAGTTaGAAGCTTTTTGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWLTAES*KLFGIA
Trigger: TGCTATTCCAAAAAGCTTTCAACTCTCAGCAGTTAG...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCTACAGGAGGTTGCAATaGCGGCTCAAACAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIAYRRLQ*RLKQFY
Trigger: ATAAAACTGTTTGAGCCGTCATTGCAACCTCCTGTA...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAATGGGACCTTGACTTCTaGGGGATTATGGTTATATGG +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQWDLDF*GIMVIW
Trigger: CCATATAACCATAATCCCTCAGAAGTCAAGGTCCCA...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAAGAATTCTGGGACCTTaGCTTCTGAGGGATTATGGT +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQRILGP*LLRDYG
Trigger: ACCATAATCCCTCAGAAGTCAAGGTCCCAGAATTCT...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAATTTGGGTATCTTTCCTaGTTGAGAGAGAATCCGGTG +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQFGYLS*LRENPV
Trigger: CACCGGATTCTCTCTCAATCAGGAAAGATACCCAAA...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATCTTGGGTTAGAGGAATaGGGAGACTGGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDLGLEE*GDWLAG
Trigger: ACCAGCCAGCCAGTCTCCTCATTCCTCTAACCCAAG...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATACTTACACCCTCTTaGCAGCGAGAAACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIAILTPS*QRETEK
Trigger: CTTTTCTGTTTCTCGCTGTCAAGAGGGTGTAAGTAT...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCTCCAACCACTCTCTCTaGAGAGCAATGAGCGTTATC +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCSNHSL*RAMSVI
Trigger: GATAACGCTCATTGCTCTTCAGAGAGAGTGGTTGGA...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACTCCAACCACTCTCTCTaGAGAGCAATGAGCGTTATC +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHSNHSL*RAMSVI
Trigger: GATAACGCTCATTGCTCTTCAGAGAGAGTGGTTGGA...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCTTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSFWYRS*RACLDV
Trigger: GACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAA...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAGAACAGAGAAAGGTTTaGCTGAACTTCACTCCGATT +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEEQRKV*LNFTPI
Trigger: AATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTC...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACACTATGGCGCTGGTATaGGTCTGTTTATTGCTGATA +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHTMALV*VCLLLI
Trigger: TATCAGCAATAAACAGACGCATACCAGCGCCATAGT...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAACTATGGCGCTGGTATaGGTCTGTTTATTGCTGATA +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGITMALV*VCLLLI
Trigger: TATCAGCAATAAACAGACGCATACCAGCGCCATAGT...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGACATGGAGACCTTGACTaGTGGAAGAGGATAGGCATT +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRHGDLD*WKRIGI
Trigger: AATGCCTATCCTCTTCCAGCAGTCAAGGTCTCCATG...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACTTACAGTTATTCCTTTaGTATAGTCCCTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: CCTANISCTLSGLVEYLHLQLFL*YSPFSP
Trigger: AGGTGAGAAGGGACTATAGCAAAGGAATAACTGTAA...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000508461.5
CDS-3UTR GCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGATCTAGAGGCTGCTGCTaGATTACAGGAGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRSRGCC*ITGGCN
Trigger: ATTGCAACCTCCTGTAATGCAGCAGCAGCCTCTAGA...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAATCTGTTATCAGCCATaGTGTAGGAAGAATCCCAGT +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIICYQP*CRKNPS
Trigger: ACTGGGATTCTTCCTACAGCATGGCTGATAACAGAT...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTTATGTTTGCTTGCTGTaGCATTACAGATCTGTTATC +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIYVCLL*HYRSVI
Trigger: GATAACAGATCTGTAATGGCACAGCAAGCAAACATA...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCATATGTTTGCTTGCTGTaGCATTACAGATCTGTTATC +
Preference number: 4 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPYVCLL*HYRSVI
Trigger: GATAACAGATCTGTAATGGCACAGCAAGCAAACATA...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTCTCCTGGTGACCGTTTaGCCCTGCGGTCTATGTTTG +
Preference number: 4 (lower is better)
Translates to: CETACCATVKCTGIKNVILLVTV*PCGLCL
Trigger: CAAACATAGACCGCAGGGGCAAACGGTCACCAGGAG...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGTTTTCCACCGATCTaGAGTCCTTCTATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEESFPPI*SPSIPV
Trigger: AACAGGGATAGAAGGACTGCAGATCGGTGGAAAACT...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGTTTCTGCTTCTGCTaGATTAACAGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRCFCFC*INSCSR
Trigger: TCTGGAGCAGCTGTTAATGCAGCAGAAGCAGAAACA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGCAAAAGGTTTCATATTaGCATTGGGTAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEQKVSY*HWVGGF
Trigger: GAAGCCCCCTACCCAATGGCAATATGAAACCTTTTG...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCVTSIF*YRSCRA
Trigger: GGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTAC...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCAAAATTGTGGTCAGATaGTCTCCTTTGGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGKIVVR*SPLEEA
Trigger: AGCTTCTTCCAAAGGAGACCATCTGACCACAATTTT...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGAAAATTGTGGTCAGATaGTCTCCTTTGGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGKIVVR*SPLEEA
Trigger: AGCTTCTTCCAAAGGAGACCATCTGACCACAATTTT...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAACACTGAATCAGCCTTaGCTGATTATCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVETLNQP*LIISNP
Trigger: TGGATTGCTGATAATCAGCCAAGGCTGATTCAGTGT...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATAACACTGAATCAGCCTTaGCTGATTATCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGITLNQP*LIISNP
Trigger: TGGATTGCTGATAATCAGCCAAGGCTGATTCAGTGT...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCACACTGAATCAGCCTTaGCTGATTATCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIATLNQP*LIISNP
Trigger: TGGATTGCTGATAATCAGCCAAGGCTGATTCAGTGT...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTCTCTTTGGCTTCACTaGGGTCTTCCAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGSLWLH*GLPVLI
Trigger: AATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGA...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATTTCTTAGTTCTGTCTaGGATTTTACCTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEFLSSV*DFTCTA
Trigger: GGCAGTGCAGGTAAAATCCCAGACAGAACTAAGAAA...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000508461.5
CDS-3UTR CCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGTTACTTGCTTGAGTTaGGGTTTGAGTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNVTCLS*GLSYRC
Trigger: ACACCTGTAACTCAAACCCCAACTCAAGCAAGTAAC...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCGGGGATAACATATGTTaGGGGCGGAAACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSGDNIC*GRKPWP
Trigger: AGGCCAGGGTTTCCGCCCCCAACATATGTTATCCCC...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAGCTCAAACAGTTTTATaGGGTCTTGGGTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRAQTVL*GLGSEG
Trigger: ACCTTCAGACCCAAGACCCCATAAAACTGTTTGAGC...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAACTTCTGAGGGATTATaGTTATATGGCTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVETSEGL*LYGSMG
Trigger: TCCCATGGAGCCATATAACCATAATCCCTCAGAAGT...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACAAACCCAACATGCCATaGTTTATGGAGCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHKPNMP*FMEPSF
Trigger: GAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCCATGCTGTTGCTTCTTaGGGAGATGTGATGTTGCAC +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCHAVAS*GDVMLH
Trigger: GTGCAACATCACATCTCCCCAAGAAGCAACAGCATG...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGACATGCTGTTGCTTCTTaGGGAGATGTGATGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRHAVAS*GDVMLH
Trigger: GTGCAACATCACATCTCCCCAAGAAGCAACAGCATG...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAGCTTTAGATAGGAGCTaGGTATTACTGGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRALDRS*VLLGVR
Trigger: TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGC...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAGCTTTAGATAGGAGCTaGGTATTACTGGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQALDRS*VLLGVR
Trigger: TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGC...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCTCATAAGGTAGAATaGTTTAAGACATTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: TVWASPANPTCHGLWSLHSHKVE*FKTFGG
Trigger: ACCTCCGAATGTCTTAAACCATTCTACCTTATGAGA...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367537.7
CDS-3UTR CCA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTTTTCTTAGTTCTGTCTaGGATTTTACCTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIFLSSV*DFTSLG
Trigger: TCCCAAAGAGGTAAAATCCCAGACAGAACTAAGAAA...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000515829.6
3UTR CAA 72 bp GGTATTACTGGGAGTGAGATGGTAAACCTGGTTAGCTaGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACA +
Preference number: 4 (lower is better)
Translates to: GITGSEMVNLVS*SRAQESVTVQT
Trigger: TGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGTAATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
3UTR CAA 72 bp ACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATTCTTAAAGGCGTGATT +
Preference number: 4 (lower is better)
Translates to: TPIRICSILCLA*QCCDLILKGVI
Trigger: AATCACGCCTTTAAGAATCAGATCACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR TCA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCTAACTGCTGAGAGTTaGAAGCTTTTTGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: RAQESVTVQTLECCSCLNLTAES*KLFGIA
Trigger: TGCTATTCCAAAAAGCTTTCAACTCTCAGCAGTTAG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGACCTGTAATACCCTGGTaGCCTTTGGAAAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRPVIPW*PLEKSK
Trigger: CTTGGATTTTTCCAAAGGTCACCAGGGTATTACAGG...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGTACAGGAGGTTGCAATaGCGGCTCAAACAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLYRRLQ*RLKQFY
Trigger: ATAAAACTGTTTGAGCCGTCATTGCAACCTCCTGTA...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCAGAATTCTGGGACCTTaGCTTCTGAGGGATTATGGT +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCRILGP*LLRDYG
Trigger: ACCATAATCCCTCAGAAGTCAAGGTCCCAGAATTCT...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAATTTGCTCGATTCTTTaGCTGGCCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRICSIL*LALQCC
Trigger: ACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAAT...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATGGGGACAAGCTGAGCTaGATGCCTATAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDGDKLS*MPIVGL
Trigger: GAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCC...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGGGAACTTCACAGCAATaGTTCTGCAGTAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWGTSQQ*FCSSRK
Trigger: TTTTCTACTACTGCAGAAGCATTGCTGTGAAGTTCC...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAACTTCACAGCAATaGTTCTGCAGTAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGGTSQQ*FCSSRK
Trigger: TTTTCTACTACTGCAGAAGCATTGCTGTGAAGTTCC...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGATCTGTTATCAGCCATaGTGTAGGAAGAATCCCAGT +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLICYQP*CRKNPS
Trigger: ACTGGGATTCTTCCTACAGCATGGCTGATAACAGAT...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTATGTTTGCTTGCTGTaGCATTACAGATCTGTTATC +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHYVCLL*HYRSVI
Trigger: GATAACAGATCTGTAATGGCACAGCAAGCAAACATA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCTATGTTTGCTTGCTGTaGCATTACAGATCTGTTATC +
Preference number: 4 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGYVCLL*HYRSVI
Trigger: GATAACAGATCTGTAATGGCACAGCAAGCAAACATA...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCAGTTTTCCACCGATCTaGAGTCCTTCTATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCSFPPI*SPSIPV
Trigger: AACAGGGATAGAAGGACTGCAGATCGGTGGAAAACT...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATTGGCCTGATGCCAACTaGTCTCAGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDWPDAN*SQRMTL
Trigger: CAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCA...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTGCTGTTTCTGCTTCTaGTGCATTAACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLCCFCF*CINSCS
Trigger: GGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTAGATTTTTCTTTTTGTTaGACTGCGAACATTTCGTGC +
Preference number: 4 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLDFSFC*TANISC
Trigger: GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATC...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGATTGCAGCTGCCTGAATaGAGAGCTCAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRLQLPE*RAQTHK
Trigger: TTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAA...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTGTCCAGACTTCAGCTaGACCCAGCTTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLCPDFS*TQLRIC
Trigger: ACAGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAACTGATAATTCCCAATTaGGAAGACTTCACACGGCAT +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQLIIPN*EDFTRH
Trigger: ATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAG...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCAAAATTGTGGTCAGATaGTCTCCTTTGGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIKIVVR*SPLEEA
Trigger: AGCTTCTTCCAAAGGAGACCATCTGACCACAATTTT...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTAGTAGTAGAAAATTGTaGTCAGATGGTCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGSSRKL*SDGLLW
Trigger: CCAAAGGAGACCATCTGACCACAATTTTCTACTACT...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGAGTTGAAAGCTTTTTaGAATAGCAGCCTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHELKAF*NSSLLN
Trigger: GTTTAAGAGGCTGCTATTCCAAAAAGCTTTCAACTC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGGAGTTGAAAGCTTTTTaGAATAGCAGCCTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGELKAF*NSSLLN
Trigger: GTTTAAGAGGCTGCTATTCCAAAAAGCTTTCAACTC...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCTCCTCTTCATGGGGATaGAAACTATTCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGISSSWG*KLFRRE
Trigger: TTCTCTTCTGAATAGTTTCCATCCCCATGAAGAGGA...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACTTTGAAGGTAACCACTaGCTTCTCTCCTGTGTCACA +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHFEGNH*LLSCVT
Trigger: TGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAAA...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATTACAGGTGTTTTTCTaGCTTCAGACACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRLQVFF*LQTLES
Trigger: AGACTCCAGTGTCTGAAGCCAGAAAAACACCTGTAA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTGATTCCACAGCTGTTTaGAGGCATCTGCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCDSTAV*RHLPVD
Trigger: ATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATC...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGGGGATTATGGTTATATaGCTCCATGGGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLGIMVI*LHGKRL
Trigger: AAGCCTTTTCCCATGGAGCCATATAACCATAATCCC...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGATTGAATGATCTGAACTaGCAGGAAGTGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRLNDLN*QEVMET
Trigger: GGTCTCCATCACTTCCTGCCAGTTCAGATCATTCAA...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCAATGGAACAGAATTATaGTTGTGTGTTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KGGHREGAEEKHKRFHIANGTEL*LCVGGE
Trigger: CTCTCCTCCAACACACAACCATAATTCTGTTCCATT...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAAATGGAACAGAATTATaGTTGTGTGTTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVENGTEL*LCVGGE
Trigger: CTCTCCTCCAACACACAACCATAATTCTGTTCCATT...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACACAATGGGTCCAAAATTaGAGAATGGAACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTQWVQN*RMEQNY
Trigger: ATAATTCTGTTCCATTCTCCAATTTTGGACCCATTG...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCTCTATCCCTGTTATCTaGAGTCCCAATGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCSIPVI*SPNGSK
Trigger: TTTGGACCCATTGGGACTCCAGATAACAGGGATAGA...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRTCHGL*SLHSQV
Trigger: AACCTGGGAATGAAGGCTCCATAAACCATGGCATGT...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCGTGTCAGGCTGTGAATaGACTAGCCTGCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSVSGCE*TSLPSV
Trigger: CACAGAAGGCAGGCTAGTCCATTCACAGCCTGACAC...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATCGTCTCTTCCAAAATaGACGACGTCGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRSSLPK*TTSCFL
Trigger: AAGAAAACACGACGTCGTCCATTTTGGAAGAGACGA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp CCCAATTGGGAAGACTTCACACGGCATGGTAAATCTACATTAAATACTGTACACAGAGAAAGGTTTGCCTaGACTTCACTCCGATTCGGA +
Preference number: 4 (lower is better)
Translates to: PNWEDFTRHGKSTLNTVHRERFA*TSLRFG
Trigger: TCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCT...GTGTACAGTATTTAATGTAGATTTACCATGCCGTGTGAAGTCTTCCCAATTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR TCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTTTACTCAGGTACACATaGCCGTGGAATTTAATAAAG +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGLLRYT*PWNLIK
Trigger: CTTTATTAAATTCCACGGTCATGTGTACCTGAGTAA...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR TCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGACTAACTGCTGAGAGTTaGAAGCTTTTTGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRLTAES*KLFGIA
Trigger: TGCTATTCCAAAAAGCTTTCAACTCTCAGCAGTTAG...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCTGTCGCACTAATACTTaGGAGGTCCTCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSCRTNT*EVLFMG
Trigger: CCCCATGAAGAGGACCTCTCAAGTATTAGTGCGACA...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCCTGTAATACCCTGGTaGCCTTTGGAAAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLPVIPW*PLEKSK
Trigger: CTTGGATTTTTCCAAAGGTCACCAGGGTATTACAGG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCAGGATGAATGTGACATaGGCTCTGAGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSRMNVT*ALRASP
Trigger: TGGAGAAGCCCTCAGAGCTCATGTCACATTCATCCT...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTCCTTCTGACAGGCCTTaGACTCTCCCTTATGGAACA +
Preference number: 4 (lower is better)
Translates to: CETACCATVKCTGIKNVIPSDRP*TLPYGT
Trigger: TGTTCCATAAGGGAGAGTTCAAGGCCTGTCAGAAGG...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGACATCTGGGACTTAAATaGAACGTTTTCTCCCACAAT +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRHLGLK*NVFSHN
Trigger: ATTGTGGGAGAAAACGTTTCATTTAAGTCCCAGATG...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367537.7
CDS-3UTR GCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCGAACAGAGAAAGGTTTaGCTGAACTTCACTCCGATT +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCEQRKV*LNFTPI
Trigger: AATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTC...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCCCTATAGTAGGACTCTaGCTGGCTGGTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSPIVGL*LAGLVS
Trigger: AGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGG...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGATTTTTCTTTTTGTTaGACTGCGAACATTTCGTGC +
Preference number: 4 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGDFSFC*TANISC
Trigger: GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATC...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCTTGGCTTCTCCCATCTaGCTTCCCTTCTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSLASPI*LPFSAF
Trigger: GAAAGCTGAGAAGGGAAGGCAGATGGGAGAAGCCAA...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTGAACGGGGCTTTCCTTaGTACACACTGACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: CETACCATVKCTGIKNVIERGFP*YTLTRS
Trigger: GCTTCTAGTCAGTGTGTAGCAAGGAAAGCCCCGTTC...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR GCA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCTTCAGGACTTCTGCCTaGCTAATATTACTTGATTTC +
Preference number: 4 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGIFRTSA*LILLDF
Trigger: GAAATCAAGTAATATTAGGCAGGCAGAAGTCCTGAA...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367537.7
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCCTGATAATTCCCAATTaGGAAGACTTCACACGGCAT +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCLIIPN*EDFTRH
Trigger: ATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAG...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGTAGTAGAAAATTGTaGTCAGATGGTCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEESSRKL*SDGLLW
Trigger: CCAAAGGAGACCATCTGACCACAATTTTCTACTACT...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGAGTAGTAGAAAATTGTaGTCAGATGGTCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLSSRKL*SDGLLW
Trigger: CCAAAGGAGACCATCTGACCACAATTTTCTACTACT...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGTCTCTTTGGCTTCACTaGGGTCTTCCAGTATTAATT +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEESLWLH*GLPVLI
Trigger: AATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGA...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACTTACAGGTGTTTTTCTaGCTTCAGACACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHLQVFF*LQTLES
Trigger: AGACTCCAGTGTCTGAAGCCAGAAAAACACCTGTAA...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCTTACAGGTGTTTTTCTaGCTTCAGACACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCLQVFF*LQTLES
Trigger: AGACTCCAGTGTCTGAAGCCAGAAAAACACCTGTAA...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACGTTACTTGCTTGAGTTaGGGTTTGAGTTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHVTCLS*GLSYRC
Trigger: ACACCTGTAACTCAAACCCCAACTCAAGCAAGTAAC...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACGGGATTATGGTTATATaGCTCCATGGGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHGIMVI*LHGKRL
Trigger: AAGCCTTTTCCCATGGAGCCATATAACCATAATCCC...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAAACCCACCCATGGCTaGCTTATCAGTTTTCCACCG +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDKPTHG*LISFPP
Trigger: CGGTGGAAAACTGATAAGCCAGCCATGGGTGGGTTT...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATTTTCGGTCCTCATCTaGGACTTAAATGAAACGTTT +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEFSVLI*DLNETF
Trigger: AAACGTTTCATTTAAGTCCCAGATGAGGACCGAAAA...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367537.7
CDS-3UTR CCA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGGGGATTTTACCTCTTTaGGAGGAAAACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEGILPL*EENFFL
Trigger: AAGGAAGAAGTTTTCCTCCCAAAGAGGTAAAATCCC...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTATGTTTCTTGCAGAATaGGGTTCTCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCMFLAE*GSLWLH
Trigger: GTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACAT...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATTTCCTTGCTACACACTaGCTAGAAGCACACCTGTGT +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDFLATH*LEAHLC
Trigger: ACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAA...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAATGTTGCAGCTGCCTaGATGCAGAGCTCAAACACA +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDNVAAA*MQSSNT
Trigger: TGTGTTTGAGCTCTGCATTCAGGCAGCTGCAACATT...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCGGGCGCAAGAATCAGTaGCAGTTCAAACACTGGAAT +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSGRKNQ*QFKHWN
Trigger: ATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCC...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR TCA 90 bp GAGAAAGGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTAGGCGTGATTCCAGCTaGAAACAAAATGTAATTCTA +
Preference number: 4 (lower is better)
Translates to: EKGLPELHSDSDLLDSLPRRDSS*KQNVIL
Trigger: TAGAATTACATTTTGTTTTCAGCTGGAATCACGCCT...AGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR GCA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGGAACTTCACAGCAATaGTTCTGCAGTAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRGTSQQ*FCSSRK
Trigger: TTTTCTACTACTGCAGAAGCATTGCTGTGAAGTTCC...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATATGTTTGCTTGCTGTaGCATTACAGATCTGTTATC +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRYVCLL*HYRSVI
Trigger: GATAACAGATCTGTAATGGCACAGCAAGCAAACATA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCCTACGCAGATACTGCTaGTTCCTTCCTCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSLRRYC*FLPLQT
Trigger: AGTCTGAAGAGGAAGGAAGCAGCAGTATCTGCGTAG...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCAATGGAACAGAATTATaGTTGTGTGTTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: DGEFLMDFSFCCTANISCNGTEL*LCVGGE
Trigger: CTCTCCTCCAACACACAACCATAATTCTGTTCCATT...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAACAATGGGTCCAAAATTaGAGAATGGAACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: FSFCCTANISCTLSGLVEQWVQN*RMEQNY
Trigger: ATAATTCTGTTCCATTCTCCAATTTTGGACCCATTG...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATTTCTTAGTTCTGTCTaGGATTTTACCTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRFLSSV*DFTSLG
Trigger: TCCCAAAGAGGTAAAATCCCAGACAGAACTAAGAAA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp CCCAATTGGGAAGACTTCACACGGCATGGTAAATCTACATTAAATACTGTACACGAACAGAGAAAGGTTTaGCTGAACTTCACTCCGATT +
Preference number: 4 (lower is better)
Translates to: PNWEDFTRHGKSTLNTVHEQRKV*LNFTPI
Trigger: AATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTC...GTGTACAGTATTTAATGTAGATTTACCATGCCGTGTGAAGTCTTCCCAATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR GCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATGGATTTTACCTGCACTaGCACATTCTGCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDGFYLH*HILLSC
Trigger: ACAGGAAAGCAGAATGTGGCAGTGCAGGTAAAATCC...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347615.6
CDS-3UTR GCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATGAACTGGGAGTTACTTaGTTGAGTTGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDELGVT*LSWGLS
Trigger: ACTCAAACCCCAACTCAAGCAAGTAACTCCCAGTTC...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR GCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCTTGCAGCTGCCTGAATaGAGAGCTCAAACACACAAA +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSLQLPE*RAQTHK
Trigger: TTTGTGTGTTTGAGCTCTGCATTCAGGCAGCTGCAA...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp ATTCCCAATTGGGAAGACTTCACACGGCATGGTAAATCTACATTAAATACTGTAGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IPNWEDFTRHGKSTLNTVVTSIF*YRSCRA
Trigger: GGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTAC...TACAGTATTTAATGTAGATTTACCATGCCGTGTGAAGTCTTCCCAATTGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTCCTCTTCATGGGGATaGAAACTATTCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLSSSWG*KLFRRE
Trigger: TTCTCTTCTGAATAGTTTCCATCCCCATGAAGAGGA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAACAATGGGTCCAAAATTaGAGAATGGAACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQQWVQN*RMEQNY
Trigger: ATAATTCTGTTCCATTCTCCAATTTTGGACCCATTG...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATTCTATCCCTGTTATCTaGAGTCCCAATGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDSIPVI*SPNGSK
Trigger: TTTGGACCCATTGGGACTCCAGATAACAGGGATAGA...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCTCTATCCCTGTTATCTaGAGTCCCAATGGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSSIPVI*SPNGSK
Trigger: TTTGGACCCATTGGGACTCCAGATAACAGGGATAGA...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTGTTTCATATTGCCATTaGGTAGGGGGCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: CETACCATVKCTGIKNVIVSYCH*VGGFTF
Trigger: AAAGGTGAAGCCCCCTACCCAATGGCAATATGAAAC...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTGGGATTATGGTTATATaGCTCCATGGGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CETACCATVKCTGIKNVIGIMVI*LHGKRL
Trigger: AAGCCTTTTCCCATGGAGCCATATAACCATAATCCC...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATACTTCTGAGGGATTATaGTTATATGGCTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDTSEGL*LYGSMG
Trigger: TCCCATGGAGCCATATAACCATAATCCCTCAGAAGT...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCACTAGCATACAGCATTaGGTAAAAGAAGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSTSIQH*VKEGME
Trigger: CTCCATCCCTTCTTTTACCCAATGCTGTATGCTAGT...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATTCGTCTCTTCCAAAATaGACGACGTCGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDSSLPK*TTSCFL
Trigger: AAGAAAACACGACGTCGTCCATTTTGGAAGAGACGA...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTTTCTTAGTTCTGTCTaGGATTTTACCTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLFLSSV*DFTSLG
Trigger: TCCCAAAGAGGTAAAATCCCAGACAGAACTAAGAAA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CCA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCAATGGGTCCAAAATTaGAGAATGGAACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: KHQILMQNGALDRSWVLLQWVQN*RMEQNY
Trigger: ATAATTCTGTTCCATTCTCCAATTTTGGACCCATTG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR TCA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATTTACTCAGGTACACATaGCCGTGGAATTTAATAAAG +
Preference number: 4 (lower is better)
Translates to: RVRKHSKHQILMQNGALDLLRYT*PWNLIK
Trigger: CTTTATTAAATTCCACGGTCATGTGTACCTGAGTAA...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS GCA 90 bp GGACAGCAGAGGAATCCTCCATGGAAGGGCCATGGCCTGTCCAGGTaGCACTCGGAGTGCTGGCCTGATGCCAACTGCTCTCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: GQQRNPPWKGHGLSR*HSECWPDANCSQRM
Trigger: CATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGAGGATTCCTCTGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS TCA 90 bp GGAGGGGGTCCCTCTCGCGAGATTTCAGCAGCGCCTGTCCCTCAGTaGTTTCCGCCTCTCTGTAGCGCTCCCTTTTGGGATCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: GGGPSREISAAPVPQ*FPPLCSAPFWDQRA
Trigger: AGCTCGTTGATCCCAAAAGGGAGCGCTACAGAGAGGCGGAAATCACTGAGGGACAGGCGCTGCTGAAATCTCGCGAGAGGGACCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS CCA 90 bp CCTCCATGGAAGGGCCATGGCCTGTCCAGGTGCCACTCGGAGTGCTaGCCTGATGCCAACTGCTCTCAGAGGATGACGTTGCTGAGAGAT +
Preference number: 5 (lower is better)
Translates to: PPWKGHGLSRCHSEC*PDANCSQRMTLLRD
Trigger: ATCTCTCAGCAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGGACTGTTTCCCAGCTaGCACCTGGTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARGLFPS*HLVSCW
Trigger: CCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCTGGTCCAGAGGGCCGTaGCTGGCTGTAAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSWSRGP*LAVRNV
Trigger: CACATTCCTTACAGCCAGCAACGGCCCTCTGGACCA...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCGGACTGTTTCCCAGCTaGCACCTGGTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGGLFPS*HLVSCW
Trigger: CCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCC...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTAGGGTTCATGGTGCCTaGTCCCCGTTGCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARRVHGA*SPLLFL
Trigger: CAGAAACAGCAACGGGGACAAGGCACCATGAACCCT...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGTCCCAGGTTGCCACTTaGGCCTCAGTGTGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVSQVAT*ASVWRV
Trigger: AACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGA...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS TCA 90 bp GCTGGTAAAGATGTAAGGGGTTGCTGGGAAGGTGGCTGTGATTGTTaGGGTCCCTGGTTCATTGGCCCTGGTCCAGAGGGCCGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: AGKDVRGCWEGGCDC*GPWFIGPGPEGRCW
Trigger: CCAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCTCAACAATCACAGCCACCTTCCCAGCAACCCCTTACATCTTTACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS TCA 90 bp TGTCTCTTGTCTCTGCTCCTCGCTGGGCATCTGTTCCATTCTCTCTaGGTAGTCTGGCTTCCTCTGCTTTCCGGGGCCTCAGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: CLLSLLLAGHLFHSL*VVWLPLLSGASGHS
Trigger: GCTGTGCCCTGAGGCCCCGGAAAGCAGAGGAAGCCAGACTACTCAGAGAGAATGGAACAGATGCCCAGCGAGGAGCAGAGACAAGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495321.1
CDS-3UTR CAA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCCACTCCGATTCGGATTaGCTCGATTCTTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSHSDSD*LDSLPG
Trigger: GCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTG...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCGGACTGTTTCCCAGCTaGCACCTGGTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QGTVWASPANPTCHGLWSGLFPS*HLVSCW
Trigger: CCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCC...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCACTCCTGGTGACCGTTaGCCCCTGCGGTCTATGTTT +
Preference number: 5 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGTPGDR*PLRSMF
Trigger: AAACATAGACCGCAGGGGCAAACGGTCACCAGGAGT...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTGCCTTCATTCCCAGGTaGCCACTTTGGCCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCAFIPR*PLWPQC
Trigger: ACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGC...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS TCA 90 bp CGGCATTCTGGGTACAGGATCCTGCTCTGGACGGAAGACTCCTGGTaGCCGTTTGCCCCTGCGGTCTATGTTTGCTTGCTGTGCCATTAC +
Preference number: 5 (lower is better)
Translates to: RHSGYRILLWTEDSW*PFAPAVYVCLLCHY
Trigger: GTAATGGCACAGCAAGCAAACATAGACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAGAATGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp GGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTTGCCACTTTGGCCTCAGTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: GTVWASPANPTCHGL*SLHSQVATLASVWR
Trigger: CCTCCACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp CCTGCAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATaGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PAGDCVGQSCKPNMP*FMEPSFPGCHFGLS
Trigger: ACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCTCAGAAACACCCCACTaGGTTTTCACCTCATCTCGG +
Preference number: 5 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSSETPH*VFTSSR
Trigger: CCGAGATGAGGTGAAAACCAAGTGGGGTGTTTCTGA...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTGTCGTATTCGTCGTaGCTGGCCTTCTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: QGTVWASPANPTCHGLWSLSYSS*LAFFVP
Trigger: GGGGACAAAGAAGGCCAGCAACGACGAATACGACAG...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACACTGGCTGGCTGGTGTaGAATGATCTGAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHTGWLV*NDLNWQ
Trigger: CTGCCAGTTCAGATCATTCAACACCAGCCAGCCAGT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCAATTATGGTTGTGTGTaGGAGGAGAGCTGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSNYGCV*EESWVG
Trigger: GCCTACCCAGCTCTCCTCCAACACACAACCATAATT...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCGCCTTCATTCCCAGGTaGCCACTTTGGCCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: QGTVWASPANPTCHGLWSAFIPR*PLWPQC
Trigger: ACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGC...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGGCTCCTGGATGTGCTTaGCTCTACAGCTGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVAPGCA*LYSCLP
Trigger: TGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGC...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGCAGAGGGGAGCTCTaGGGGTCCTCAAACGGCATT +
Preference number: 5 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVSRGEL*GSSNGI
Trigger: AATGCCGTTTGAGGACCCCAAGAGCTCCCCTCTGCT...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000507469.5
CDS TCA 90 bp CCTCCAGTGTCATGCATCACCAGCTCCCACTATGGACTATGCTGGTaGCCTGGAGCCGGCCCACAAGAAGGGGTGAGTTATATGGCACAA +
Preference number: 5 (lower is better)
Translates to: PPVSCITSSHYGLCW*PGAGPQEGVSYMAQ
Trigger: TTGTGCCATATAACTCACCCCTTCTTGTGGGCCGGCTCCAGGTCACCAGCATAGTCCATAGTGGGAGCTGGTGATGCATGACACTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS GCA 90 bp CATGGCCTGTCCAGGTGCCACTCGGAGTGCTGGCCTGATGCCAACTaGTCTCAGAGGATGACGTTGCTGAGAGATAATCAATGCCAAACC +
Preference number: 5 (lower is better)
Translates to: HGLSRCHSECWPDAN*SQRMTLLRDNQCQT
Trigger: GGTTTGGCATTGATTATCTCTCAGCAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCTGGACAGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 90 bp CCTCAGTGTGGAGGGTTCATGGTGCCTTGTCCCCGTTGCTGTTTCTaGTTCTGCTGCATTAACAGCTGCTCCAGAGCAGAAGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PQCGGFMVPCPRCCF*FCCINSCSRAEGPG
Trigger: TCCTGGACCTTCTGCTCTGGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCAACGGGGACAAGGCACCATGAACCCTCCACACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp AGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAGCAATGTCTCCAAGGTGGACGAGGC +
Preference number: 5 (lower is better)
Translates to: RGQAELHAYSRTLPG*SGFCIEQCLQGGRG
Trigger: GCCTCGTCCACCTTGGAGACATTGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507406.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGGATTTGCTCGATTCTTaGCCTGGCCTTGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVDLLDS*PGLAVL
Trigger: CAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATC...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp TGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTCACTCCGATTCGGATTaGCTCGATTCTTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: WRGQAELHAYSRTLPGWSHSDSD*LDSLPG
Trigger: GCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTG...AGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CAA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCGGAACAGAGAAAGGTTaGCCTGAACTTCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSGTEKG*PELHSD
Trigger: ATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCC...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTCAGATGGTCTCCTTaGGAAGAAGCTAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARVRWSP*EEAKIA
Trigger: GGCTATCTTAGCTTCTTCCAAAGGAGACCATCTGAC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGCGTTGCTGGCCTTCTTaGTCCCCTGTAATACCCTGG +
Preference number: 5 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRRCWPS*SPVIPW
Trigger: CCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACG...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGAGAATGAGGTTCTCTTaGGCTTCACTGGGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVRMRFS*ASLGSS
Trigger: GGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCT...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACAGAATGAGGTTCTCTTaGGCTTCACTGGGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHRMRFS*ASLGSS
Trigger: GGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCT...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTCTGGGAGTTACTTGCTaGAGTTGGGGTTTGAGTTAC +
Preference number: 5 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARLGVTC*SWGLSY
Trigger: GTAACTCAAACCCCAACTCAAGCAAGTAACTCCCAG...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGGAGGCATCTGCCTGTaGATACTGCTGGAATCCAGA +
Preference number: 5 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQGGICL*ILLESR
Trigger: TCTGGATTCCAGCAGTATCAACAGGCAGATGCCTCC...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACCAGTTTTATGGGGTCTaGGGTCTGAAGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHQFYGV*GLKVVG
Trigger: CCCTACTACCTTCAGACCCAAGACCCCATAAAACTG...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTTTTATGGGGTCTaGGGTCTGAAGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGQFYGV*GLKVVG
Trigger: CCCTACTACCTTCAGACCCAAGACCCCATAAAACTG...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGGACTGAGTTCTGCTTaGGAGCTGGATGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHGLSSA*ELDVRF
Trigger: AAACCTGACATCCAGCTCCAAAGCAGAACTCAGTCC...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCCAGTCCGGAACAGAATTATGGTaGTGTGTTGGAGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: SEKQKRGLPPAGDCVGQSGTELW*CVGGEL
Trigger: CAGCTCTCCTCCAACACACAACCATAATTCTGTTCC...GGACTGGCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGGGTTCATGGTGCCTaGTCCCCGTTGCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNRVHGA*SPLLFL
Trigger: CAGAAACAGCAACGGGGACAAGGCACCATGAACCCT...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGCTCCTGGATGTGCTTaGCTCTACAGCTGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQAPGCA*LYSCLP
Trigger: TGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGC...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTAAACCTGGTTAGCTaGTCTAGGGCGCAAGAATCA +
Preference number: 5 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARVNLVS*SRAQES
Trigger: TGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCAGCAGAGGGGAGCTCTaGGGGTCCTCAAACGGCATT +
Preference number: 5 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGSRGEL*GSSNGI
Trigger: AATGCCGTTTGAGGACCCCAAGAGCTCCCCTCTGCT...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367537.7
CDS-3UTR CAA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAGCAGAGGGGAGCTCTaGGGGTCCTCAAACGGCATT +
Preference number: 5 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARSRGEL*GSSNGI
Trigger: AATGCCGTTTGAGGACCCCAAGAGCTCCCCTCTGCT...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367537.7
ENST00000508461.5
CDS GCA 90 bp CCACTTTGGCCTCAGTGTGGAGGGTTCATGGTGCCTTGTCCCCGTTaGTGTTTCTGCTTCTGCTGCATTAACAGCTGCTCCAGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: PLWPQCGGFMVPCPR*CFCFCCINSCSRAE
Trigger: TTCTGCTCTGGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCAACGGGGACAAGGCACCATGAACCCTCCACACTGAGGCCAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS GCA 90 bp TGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTaGCACTTTGGCCTCAGTGTGGAGGGTTCATGGTGCCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: CKPNMPWFMEPSFPG*HFGLSVEGSWCLVP
Trigger: GGGGACAAGGCACCATGAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp CAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTaGCCTCAGTGTGGAGGGTTCATGGTGCCTTGTCCCCGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: QHAMVYGAFIPRLPL*PQCGGFMVPCPRCC
Trigger: ACAGCAACGGGGACAAGGCACCATGAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTGGTCTGATTTGCTCGATTCTTaGCCTGGCCTTGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: WRGQAELHAYSRTLPGWSDLLDS*PGLAVL
Trigger: CAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATC...AGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CAA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGCACTCCGATTCGGATTaGCTCGATTCTTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRHSDSD*LDSLPG
Trigger: GCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTG...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCGGAACAGAGAAAGGTTaGCCTGAACTTCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGGTEKG*PELHSD
Trigger: ATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCC...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCTCAGAAACACCCCACTaGGTTTTCACCTCATCTCGG +
Preference number: 5 (lower is better)
Translates to: QGTVWASPANPTCHGLWSSETPH*VFTSSR
Trigger: CCGAGATGAGGTGAAAACCAAGTGGGGTGTTTCTGA...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCACGTTGCTGGCCTTCTTaGTCCCCTGTAATACCCTGG +
Preference number: 5 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESRCWPS*SPVIPW
Trigger: CCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACG...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACGTTGCTGGCCTTCTTaGTCCCCTGTAATACCCTGG +
Preference number: 5 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARRCWPS*SPVIPW
Trigger: CCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGACTGTCGTATTCGTCGTaGCTGGCCTTCTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRLSYSS*LAFFVP
Trigger: GGGGACAAAGAAGGCCAGCAACGACGAATACGACAG...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTTATAGAGATCAAGCGTaGCTGTCGTATTCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARYRDQA*LSYSSL
Trigger: CAACGACGAATACGACAGCAACGCTTGATCTCTATA...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACGGACTGTTTCCCAGCTaGCACCTGGTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CCTANISCTLSGLVEYLHGLFPS*HLVSCW
Trigger: CCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCC...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCATGGTCCAGAGGGCCGTaGCTGGCTGTAAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPWSRGP*LAVRNV
Trigger: CACATTCCTTACAGCCAGCAACGGCCCTCTGGACCA...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGGAGGCATCTGCCTGTaGATACTGCTGGAATCCAGA +
Preference number: 5 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNGGICL*ILLESR
Trigger: TCTGGATTCCAGCAGTATCAACAGGCAGATGCCTCC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACCCCTGCGGTCTATGTTaGCTTGCTGTGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNPCGLC*LAVPLQ
Trigger: CTGTAATGGCACAGCAAGCAAACATAGACCGCAGGG...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTCCTGGTGACCGTTaGCCCCTGCGGTCTATGTTT +
Preference number: 5 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSETPGDR*PLRSMF
Trigger: AAACATAGACCGCAGGGGCAAACGGTCACCAGGAGT...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTGGAACAGAATTATGGTaGTGTGTTGGAGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCGTELW*CVGGEL
Trigger: CAGCTCTCCTCCAACACACAACCATAATTCTGTTCC...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCAGGGTTCATGGTGCCTaGTCCCCGTTGCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGRVHGA*SPLLFL
Trigger: CAGAAACAGCAACGGGGACAAGGCACCATGAACCCT...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAACACTGTATCCTCGATaGGGGCTCGAGCACCTACAG +
Preference number: 5 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARTLYPR*GLEHLQ
Trigger: CTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGT...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTCTTCAGACTGTCTTTaGGGCCCCAACTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLSSDCL*GPNCWT
Trigger: GGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAGA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTGTAAACCTGGTTAGCTaGTCTAGGGCGCAAGAATCA +
Preference number: 5 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCVNLVS*SRAQES
Trigger: TGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS TCA 90 bp ATTGTATGTCCAGACACGGTCGTTAGGGACACTTTAGGCTTTCCATaGGGACAGCAGAGGAATCCTCCATGGAAGGGCCATGGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: IVCPDTVVRDTLGFP*GQQRNPPWKGHGLS
Trigger: GGACAGGCCATGGCCCTTCCATGGAGGATTCCTCTGCTGTCCTCATGGAAAGCCTAAAGTGTCCCTAACGACCGTGTCTGGACATACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495321.1
CDS GCA 90 bp GCTGTAAGGAATGTGGGACTGTTTCCCAGCTTGCACCTGGTTTCCTaGTGGAGAGTGAGCTGTAGGCTGAAGAAAGGTTCCTGGGACAGA +
Preference number: 5 (lower is better)
Translates to: AVRNVGLFPSLHLVS*WRVSCRLKKGSWDR
Trigger: TCTGTCCCAGGAACCTTTCTTCAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCACATTCCTTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 90 bp TTCTCCAATAAGGATTTCTCAAACGGCATTCTGGGTACAGGATCCTaGTCTGGACGGAAGACTCCTGGTGACCGTTTGCCCCTGCGGTCT +
Preference number: 5 (lower is better)
Translates to: FSNKDFSNGILGTGS*SGRKTPGDRLPLRS
Trigger: AGACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGAAATCCTTATTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000515829.6
CDS CCA 90 bp GGAGACCACGGAGTCCCTTCAAAAAGGGAATACAGAGATGTTTCCTaGGGGGCCATTGAGGGACTGAGTTCTGCTTTGGAGCTGGATGTC +
Preference number: 5 (lower is better)
Translates to: GDHGVPSKREYRDVS*GAIEGLSSALELDV
Trigger: GACATCCAGCTCCAAAGCAGAACTCAGTCCCTCAATGGCCCCCCAGGAAACATCTCTGTATTCCCTTTTTGAAGGGACTCCGTGGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000493045.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp AGTGTCATGCATCACCAGCTCCCACTATGGACTATGCTGGTGACCTaGAGCCGGCCCACAAGAAGGGGTGAGTTATATGGCACAATGTCT +
Preference number: 5 (lower is better)
Translates to: SVMHHQLPLWTMLVT*SRPTRRGELYGTMS
Trigger: AGACATTGTGCCATATAACTCACCCCTTCTTGTGGGCCGGCTCCAGGTCACCAGCATAGTCCATAGTGGGAGCTGGTGATGCATGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CAA 90 bp CAGCACCACCACCCACACTGTATCCTCGATTGGGGCTCGAGCACCTACAGAGTGATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: QHHHPHCILDWGSSTYRVILCLA*QCCDLI
Trigger: AATCAGATCACAACACTGCAAGGCCAGGCAAAGAAT...CACTCTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGTGGGTGGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGCAGTTTTATGGGGTCTaGGGTCTGAAGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRQFYGV*GLKVVG
Trigger: CCCTACTACCTTCAGACCCAAGACCCCATAAAACTG...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCCCCTGCGGTCTATGTTaGCTTGCTGTGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGPCGLC*LAVPLQ
Trigger: CTGTAATGGCACAGCAAGCAAACATAGACCGCAGGG...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAACTCCTGGTGACCGTTaGCCCCTGCGGTCTATGTTT +
Preference number: 5 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTTPGDR*PLRSMF
Trigger: AAACATAGACCGCAGGGGCAAACGGTCACCAGGAGT...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGGGACTGAGTTCTGCTTaGGAGCTGGATGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRGLSSA*ELDVRF
Trigger: AAACCTGACATCCAGCTCCAAAGCAGAACTCAGTCC...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGGACTGAGTTCTGCTTaGGAGCTGGATGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNGLSSA*ELDVRF
Trigger: AAACCTGACATCCAGCTCCAAAGCAGAACTCAGTCC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTGGCTGGCTGGTGTaGAATGATCTGAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSETGWLV*NDLNWQ
Trigger: CTGCCAGTTCAGATCATTCAACACCAGCCAGCCAGT...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAATTATGGTTGTGTGTaGGAGGAGAGCTGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVNYGCV*EESWVG
Trigger: GCCTACCCAGCTCTCCTCCAACACACAACCATAATT...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AACTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACTCTCAGAGGATGACGTaGCTGAGAGATAATCAATGC +
Preference number: 5 (lower is better)
Translates to: NSIHSHTQPLPSGTADGHSQRMT*LRDNQC
Trigger: GCATTGATTATCTCTCAGCAACGTCATCCTCTGAGA...GTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTCCCAGGTTGCCACTTaGGCCTCAGTGTGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWSQVAT*ASVWRV
Trigger: AACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAACACTGTATCCTCGATaGGGGCTCGAGCACCTACAG +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPTLYPR*GLEHLQ
Trigger: CTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGT...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCCCATGCTGTTGCTTCTaGGGGAGATGTGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: PSLLHSEDDKARNPAPRVPCCCF*GRCDVA
Trigger: TGCAACATCACATCTCCCCAAGAAGCAACAGCATGG...GACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGCTCCTGGATGTGCTTaGCTCTACAGCTGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESAPGCA*LYSCLP
Trigger: TGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS GCA 90 bp TCCAAATCGGTAACTAGCATTTTCTGGTACAGGTCCTGCAGAGCCTaGCTGGATGTCCAGACTTCAGCTGGACCCAGCTTAGAATCGGAG +
Preference number: 5 (lower is better)
Translates to: SKSVTSIFWYRSCRA*LDVQTSAGPSLESE
Trigger: CTCCGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTACCGATTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419169.5
ENST00000508461.5
CDS CCA 90 bp GTAAGGAATGTGGGACTGTTTCCCAGCTTGCACCTGGTTTCCTGCTaGAGAGTGAGCTGTAGGCTGAAGAAAGGTTCCTGGGACAGAAAC +
Preference number: 5 (lower is better)
Translates to: VRNVGLFPSLHLVSC*RVSCRLKKGSWDRN
Trigger: GTTTCTGTCCCAGGAACCTTTCTTCAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCACATTCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp TTTTCCCTAATGGGCCTTGAACCTGAGGGGGATTCCACAGCTGTTTaGAGGCATCTGCCTGTTGATACTGCTGGAATCCAGAGTGGTGAG +
Preference number: 5 (lower is better)
Translates to: FSLMGLEPEGDSTAV*RHLPVDTAGIQSGE
Trigger: CTCACCACTCTGGATTCCAGCAGTATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATCCCCCTCAGGTTCAAGGCCCATTAGGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCGATTTGCTCGATTCTTaGCCTGGCCTTGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGDLLDS*PGLAVL
Trigger: CAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATC...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CTTGACAGCGAGAAACAGAAAAGAGGGCTGCCACCTGCAGGGGACTGTGTGGGCTTTAGAAAGTGCTTTTaGCAGATTAGTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: LDSEKQKRGLPPAGDCVGFRKCF*QISGGS
Trigger: GCTGCCTCCACTAATCTGCAAAAAGCACTTTCTAAA...GCCCACACAGTCCCCTGCAGGTGGCAGCCCTCTTTTCTGTTTCTCGCTGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCTGTCGTATTCGTCGTaGCTGGCCTTCTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGLSYSS*LAFFVP
Trigger: GGGGACAAAGAAGGCCAGCAACGACGAATACGACAG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCCATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTTTATCAGCAATCCATTaGCCTATAGAGATCAAGCGT +
Preference number: 5 (lower is better)
Translates to: LHTLAHTTPPLWDSRWARLSAIH*PIEIKR
Trigger: ACGCTTGATCTCTATAGGCAAATGGATTGCTGATAA...ACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGAGAATGAGGTTCTCTTaGGCTTCACTGGGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLRMRFS*ASLGSS
Trigger: GGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCT...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAAATTATGGTTGTGTGTaGGAGGAGAGCTGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRNYGCV*EESWVG
Trigger: GCCTACCCAGCTCTCCTCCAACACACAACCATAATT...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTAATTATGGTTGTGTGTaGGAGGAGAGCTGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGNYGCV*EESWVG
Trigger: GCCTACCCAGCTCTCCTCCAACACACAACCATAATT...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATCCCAGGTTGCCACTTaGGCCTCAGTGTGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: FSFCCTANISCTLSGLVESQVAT*ASVWRV
Trigger: AACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGA...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTAACACTGTATCCTCGATaGGGGCTCGAGCACCTACAG +
Preference number: 5 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLTLYPR*GLEHLQ
Trigger: CTGTAGGTGCTCGAGCCCCAATCGAGGATACAGTGT...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTCCATGCTGTTGCTTCTaGGGGAGATGTGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: GQSCKPNMPWFMEPSFPGPCCCF*GRCDVA
Trigger: TGCAACATCACATCTCCCCAAGAAGCAACAGCATGG...ACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTCTTCAGACTGTCTTTaGGGCCCCAACTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWSSDCL*GPNCWT
Trigger: GGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAGA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTCTTCAGACTGTCTTTaGGGCCCCAACTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGSSDCL*GPNCWT
Trigger: GGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAGA...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGGTTTCATATTGCCATaGGGTAGGGGGCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESGFILP*GRGLHL
Trigger: AAGGTGAAGCCCCCTACCCAATGGCAATATGAAACC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGTAAACCTGGTTAGCTaGTCTAGGGCGCAAGAATCA +
Preference number: 5 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNVNLVS*SRAQES
Trigger: TGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS GCA 90 bp TCCAAATCGGTAACTAGCATTTTCTGGTACAGGTCCTGCAGAGCCTaGCTGGATGTCCAGACTTCAGCTGGACCCAGCTTAGAATCTGTC +
Preference number: 5 (lower is better)
Translates to: SKSVTSIFWYRSCRA*LDVQTSAGPSLESV
Trigger: GACAGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTACCGATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000367538.1
ENST00000440812.7
ENST00000444547.6
ENST00000507469.5
ENST00000507691.6
ENST00000515829.6
ENST00000638826.1
CDS GCA 90 bp CCTGGGCTCCCATCTGCAGCCAGCGACTCTATCACAGATGTTTCTTaGAGAATGAGGTTCTCTTTGGCTTCACTGGGGTCTTCCAGTATT +
Preference number: 5 (lower is better)
Translates to: PGLPSAASDSITDVS*RMRFSLASLGSSSI
Trigger: AATACTGGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACATCTGTGATAGAGTCGCTGGCTGCAGATGGGAGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAACACTCCGATTCGGATTaGCTCGATTCTTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKHSDSD*LDSLPG
Trigger: GCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTG...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTGCAGTGTTGCACTCCGATTCGGATTaGCTCGATTCTTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ELHSDSDLLDSLPGLAVLHSDSD*LDSLPG
Trigger: GCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTG...CAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CAA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGCACTCCGATTCGGATTaGCTCGATTCTTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGHSDSD*LDSLPG
Trigger: GCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTG...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ACTCTGCCTGGCTGGTCTGGTTTCTGTATCGAGCTAGACCCCATTTTCAGGTCCGGAACAGAGAAAGGTTaGCCTGAACTTCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: TLPGWSGFCIELDPIFRSGTEKG*PELHSD
Trigger: ATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCC...GGACCTGAAAATGGGGTCTAGCTCGATACAGAAACCAGACCAGCCAGGCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CAA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAGCTGATAATTCCCAATaGGGAAGACTTCACACGGCA +
Preference number: 5 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARADNSQ*GRLHTA
Trigger: TGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGC...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAATTTAGAAAGTGCTTTTaGCAGATTAGTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQFRKCF*QISGGS
Trigger: GCTGCCTCCACTAATCTGCAAAAAGCACTTTCTAAA...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACGTTGCTGGCCTTCTTaGTCCCCTGTAATACCCTGG +
Preference number: 5 (lower is better)
Translates to: FFLLHCEHFVHTQRAGGIRCWPS*SPVIPW
Trigger: CCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACG...TATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGCTGTCGTATTCGTCGTaGCTGGCCTTCTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWLSYSS*LAFFVP
Trigger: GGGGACAAAGAAGGCCAGCAACGACGAATACGACAG...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCTGTCGTATTCGTCGTaGCTGGCCTTCTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGILSYSS*LAFFVP
Trigger: GGGGACAAAGAAGGCCAGCAACGACGAATACGACAG...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGCACACTGAATCAGCCTaGGCTGATTATCAGCAATCC +
Preference number: 5 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLHTESA*ADYQQS
Trigger: GGATTGCTGATAATCAGCCAAGGCTGATTCAGTGTG...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAGAATGAGGTTCTCTTaGGCTTCACTGGGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: CCTANISCTLSGLVEYLHRMRFS*ASLGSS
Trigger: GGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CAGGGGACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCCTGTGTCACAGTTGTaGCTTAAATTTCGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: QGTVWASPANPTCHGLWSPVSQL*LKFRLV
Trigger: TACAAGCCGAAATTTAAGCAACAACTGTGACACAGG...GCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGACTGGGAGTTACTTGCTaGAGTTGGGGTTTGAGTTAC +
Preference number: 5 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARLGVTC*SWGLSY
Trigger: GTAACTCAAACCCCAACTCAAGCAAGTAACTCCCAG...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGTGGTCCAGAGGGCCGTaGCTGGCTGTAAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEWSRGP*LAVRNV
Trigger: CACATTCCTTACAGCCAGCAACGGCCCTCTGGACCA...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAATGGTCCAGAGGGCCGTaGCTGGCTGTAAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQWSRGP*LAVRNV
Trigger: CACATTCCTTACAGCCAGCAACGGCCCTCTGGACCA...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACCCCTGCGGTCTATGTTaGCTTGCTGTGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHPCGLC*LAVPLQ
Trigger: CTGTAATGGCACAGCAAGCAAACATAGACCGCAGGG...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCACTCCTGGTGACCGTTaGCCCCTGCGGTCTATGTTT +
Preference number: 5 (lower is better)
Translates to: KGGHREGAEEKHKRFHIATPGDR*PLRSMF
Trigger: AAACATAGACCGCAGGGGCAAACGGTCACCAGGAGT...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTAATTATGGTTGTGTGTaGGAGGAGAGCTGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFINYGCV*EESWVG
Trigger: GCCTACCCAGCTCTCCTCCAACACACAACCATAATT...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGAGGAACAGAATTATGGTaGTGTGTTGGAGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRGTELW*CVGGEL
Trigger: CAGCTCTCCTCCAACACACAACCATAATTCTGTTCC...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACTCTCAGAGGATGACGTaGCTGAGAGATAATCAATGC +
Preference number: 5 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNSQRMT*LRDNQC
Trigger: GCATTGATTATCTCTCAGCAACGTCATCCTCTGAGA...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAGCCTTCATTCCCAGGTaGCCACTTTGGCCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: FSFCCTANISCTLSGLVEAFIPR*PLWPQC
Trigger: ACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGC...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAACTGAGAAGTTCCCATaGGCTTCTCCCATCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPTEKFP*ASPICL
Trigger: AAGGCAGATGGGAGAAGCCAATGGGAACTTCTCAGT...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAATGGGATTTTACCTCTTaGGGAGGAAAACTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQWDFTS*GGKLLP
Trigger: AGGAAGAAGTTTTCCTCCCAAAGAGGTAAAATCCCA...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS GCA 90 bp AAAGCGTATTCCAAATCGGTAACTAGCATTTTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTCCAGACTTCAGCTGGACCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: KAYSKSVTSIFWYRS*RACLDVQTSAGPSL
Trigger: TAAGCTGGGTCCAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTACCGATTTGGAATACGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000367538.1
ENST00000419169.5
ENST00000440812.7
ENST00000444547.6
ENST00000507469.5
ENST00000507691.6
ENST00000508461.5
ENST00000515829.6
ENST00000638826.1
CDS GCA 90 bp AATGCCAAACCCACCCATGGCTGGCTTATCAGTTTTCCACCGATCTaGAGTCCTTCTATCCCTGTTATCTGGAGTCCCAATGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: NAKPTHGWLISFPPI*SPSIPVIWSPNGSK
Trigger: TTTGGACCCATTGGGACTCCAGATAACAGGGATAGAAGGACTGCAGATCGGTGGAAAACTGATAAGCCAGCCATGGGTGGGTTTGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 90 bp TGCTTCTGCTGCATTAACAGCTGCTCCAGAGCAGAAGGTCCAGGATaGATCATGGAACTGGACCAGATAGACTTTAGGCTTTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: CFCCINSCSRAEGPG*IMELDQIDFRLSMR
Trigger: CCTCATGGAAAGCCTAAAGTCTATCTGGTCCAGTTCCATGATGCATCCTGGACCTTCTGCTCTGGAGCAGCTGTTAATGCAGCAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGILCLA*QCCDLI
Trigger: AATCAGATCACAACACTGCAAGGCCAGGCAAAGAAT...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTGATTTGCTCGATTCTTaGCCTGGCCTTGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: GLPELHSDSDLLDSLPGLDLLDS*PGLAVL
Trigger: CAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATC...AAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CAA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGGATTTGCTCGATTCTTaGCCTGGCCTTGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGDLLDS*PGLAVL
Trigger: CAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATC...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATCACTCCGATTCGGATTaGCTCGATTCTTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RAQESVTVQTLECCSCLNHSDSD*LDSLPG
Trigger: GCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTG...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACGGAACAGAGAAAGGTTaGCCTGAACTTCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: CCTANISCTLSGLVEYLHGTEKG*PELHSD
Trigger: ATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCC...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTGCTGATAATTCCCAATaGGGAAGACTTCACACGGCA +
Preference number: 5 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFIADNSQ*GRLHTA
Trigger: TGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGC...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAGTCAGATGGTCTCCTTaGGAAGAAGCTAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPVRWSP*EEAKIA
Trigger: GGCTATCTTAGCTTCTTCCAAAGGAGACCATCTGAC...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTATCAGAAACACCCCACTaGGTTTTCACCTCATCTCGG +
Preference number: 5 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLSETPH*VFTSSR
Trigger: CCGAGATGAGGTGAAAACCAAGTGGGGTGTTTCTGA...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGATTCTGTAGAGGACACTaGCACAGGATGCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARFCRGH*HRMPRK
Trigger: TTTTCTTGGCATCCTGTGCAAGTGTCCTCTACAGAA...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCACACTGAATCAGCCTaGGCTGATTATCAGCAATCC +
Preference number: 5 (lower is better)
Translates to: CCTANISCTLSGLVEYLHHTESA*ADYQQS
Trigger: GGATTGCTGATAATCAGCCAAGGCTGATTCAGTGTG...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATACACTCGCACACACAACCCCTCCCCTCTGGGACAGCAGATGGGCACGTGTGTTATCACAGATGTTTCTaGCAGAATGAGGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: IHSHTQPLPSGTADGHVCYHRCF*QNEVLF
Trigger: AAAGAGAACCTCATTCTGCAAGAAACATCTGTGATA...ACACACGTGCCCATCTGCTGTCCCAGAGGGGAGGGGTTGTGTGTGCGAGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTCTCCTGTGTCACAGTaGTTGCTTAAATTTCGGCTT +
Preference number: 5 (lower is better)
Translates to: GPVLQTQHAMVYGAFIPRSPVSQ*LLKFRL
Trigger: AAGCCGAAATTTAAGCAACAACTGTGACACAGGAGA...CCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGAGGAAAACTTCTTCCTaGGTCTCTGTTCACTTCTCG +
Preference number: 5 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLRKTSS*VSVHFS
Trigger: CGAGAAGTGAACAGAGACCAAGGAAGAAGTTTTCCT...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTGGGAGTTACTTGCTaGAGTTGGGGTTTGAGTTAC +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPLGVTC*SWGLSY
Trigger: GTAACTCAAACCCCAACTCAAGCAAGTAACTCCCAG...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACGGAGGCATCTGCCTGTaGATACTGCTGGAATCCAGA +
Preference number: 5 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHGGICL*ILLESR
Trigger: TCTGGATTCCAGCAGTATCAACAGGCAGATGCCTCC...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGCCCTGCGGTCTATGTTaGCTTGCTGTGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWPCGLC*LAVPLQ
Trigger: CTGTAATGGCACAGCAAGCAAACATAGACCGCAGGG...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGACTCCTGGTGACCGTTaGCCCCTGCGGTCTATGTTT +
Preference number: 5 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLTPGDR*PLRSMF
Trigger: AAACATAGACCGCAGGGGCAAACGGTCACCAGGAGT...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAACTGGCTGGCTGGTGTaGAATGATCTGAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: FSFCCTANISCTLSGLVETGWLV*NDLNWQ
Trigger: CTGCCAGTTCAGATCATTCAACACCAGCCAGCCAGT...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTACTGGCTGGCTGGTGTaGAATGATCTGAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGTGWLV*NDLNWQ
Trigger: CTGCCAGTTCAGATCATTCAACACCAGCCAGCCAGT...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAGGAACAGAATTATGGTaGTGTGTTGGAGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPGTELW*CVGGEL
Trigger: CAGCTCTCCTCCAACACACAACCATAATTCTGTTCC...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGGCCTTCATTCCCAGGTaGCCACTTTGGCCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEAFIPR*PLWPQC
Trigger: ACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGC...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGACTGAGAAGTTCCCATaGGCTTCTCCCATCTGCCTT +
Preference number: 5 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGTEKFP*ASPICL
Trigger: AAGGCAGATGGGAGAAGCCAATGGGAACTTCTCAGT...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGTCTTCAGACTGTCTTTaGGGCCCCAACTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLSSDCL*GPNCWT
Trigger: GGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAGA...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCGGTTTCATATTGCCATaGGGTAGGGGGCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGGFILP*GRGLHL
Trigger: AAGGTGAAGCCCCCTACCCAATGGCAATATGAAACC...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGGTTTCATATTGCCATaGGGTAGGGGGCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHGFILP*GRGLHL
Trigger: AAGGTGAAGCCCCCTACCCAATGGCAATATGAAACC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGCAGCAGCTGCAGGTCTaGCACAGACAAAAACAAAAA +
Preference number: 5 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEQQLQV*HRQKQK
Trigger: TTTTTGTTTTTGTCTGTGCAAGACCTGCAGCTGCTG...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCACAGCAGCTGCAGGTCTaGCACAGACAAAAACAAAAA +
Preference number: 5 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESQQLQV*HRQKQK
Trigger: TTTTTGTTTTTGTCTGTGCAAGACCTGCAGCTGCTG...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS CCA 90 bp TCTGGAGTCCCAATGGGTCCAAAATTGGAGAATGGAACAGAATTATaGTTGTGTGTTGGAGGAGAGCTGGGTAGGCTGCTTGGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: SGVPMGPKLENGTEL*LCVGGELGRLLGLE
Trigger: CTCTAACCCAAGCAGCCTACCCAGCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAAGATTTGCTCGATTCTTaGCCTGGCCTTGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: FSFCCTANISCTLSGLVEDLLDS*PGLAVL
Trigger: CAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATC...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTTGCAGTGTTGTGATCGGAACAGAGAAAGGTTaGCCTGAACTTCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: SLRFGFARFFAWPCSVVIGTEKG*PELHSD
Trigger: ATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCC...GATCACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CAA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGGCTGATAATTCCCAATaGGGAAGACTTCACACGGCA +
Preference number: 5 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWADNSQ*GRLHTA
Trigger: TGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGC...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAAGCTGATAATTCCCAATaGGGAAGACTTCACACGGCA +
Preference number: 5 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKADNSQ*GRLHTA
Trigger: TGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGC...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGGTCAGATGGTCTCCTTaGGAAGAAGCTAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWVRWSP*EEAKIA
Trigger: GGCTATCTTAGCTTCTTCCAAAGGAGACCATCTGAC...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACGTCAGATGGTCTCCTTaGGAAGAAGCTAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHVRWSP*EEAKIA
Trigger: GGCTATCTTAGCTTCTTCCAAAGGAGACCATCTGAC...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTTCAGAAACACCCCACTaGGTTTTCACCTCATCTCGG +
Preference number: 5 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGSETPH*VFTSSR
Trigger: CCGAGATGAGGTGAAAACCAAGTGGGGTGTTTCTGA...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAAGATTCTCCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCTCAGAAACACCCCACTaGGTTTTCACCTCATCTCGG +
Preference number: 5 (lower is better)
Translates to: KDSPPPHYSTVRMIRRGISETPH*VFTSSR
Trigger: CCGAGATGAGGTGAAAACCAAGTGGGGTGTTTCTGA...GATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGGAGAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTCCTGGATGTGCTTTGCTCTACAGCTGTCTTCCAGCTCTTAAGTTCCACAAGGAAAACTTCTTCCTaGGTCTCTGTTCACTTCTCG +
Preference number: 5 (lower is better)
Translates to: GLLDVLCSTAVFQLLSSTRKTSS*VSVHFS
Trigger: CGAGAAGTGAACAGAGACCAAGGAAGAAGTTTTCCT...TGTGGAACTTAAGAGCTGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACAGGAAAACTTCTTCCTaGGTCTCTGTTCACTTCTCG +
Preference number: 5 (lower is better)
Translates to: CCTANISCTLSGLVEYLHRKTSS*VSVHFS
Trigger: CGAGAAGTGAACAGAGACCAAGGAAGAAGTTTTCCT...GTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCAAGTTACTTGCTTGAGTaGGGGTTTGAGTTACAGGTG +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPSYLLE*GFELQV
Trigger: CACCTGTAACTCAAACCCCAACTCAAGCAAGTAACT...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACCTGGGAGTTACTTGCTaGAGTTGGGGTTTGAGTTAC +
Preference number: 5 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHLGVTC*SWGLSY
Trigger: GTAACTCAAACCCCAACTCAAGCAAGTAACTCCCAG...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGACTGTTTCCCAGCTaGCACCTGGTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KHQILMQNGALDRSWVLLGLFPS*HLVSCW
Trigger: CCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCC...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTGGTCCAGAGGGCCGTaGCTGGCTGTAAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: KHQILMQNGALDRSWVLLWSRGP*LAVRNV
Trigger: CACATTCCTTACAGCCAGCAACGGCCCTCTGGACCA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAGGAGGCATCTGCCTGTaGATACTGCTGGAATCCAGA +
Preference number: 5 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQGGICL*ILLESR
Trigger: TCTGGATTCCAGCAGTATCAACAGGCAGATGCCTCC...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTCAGTTTTATGGGGTCTaGGGTCTGAAGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGQFYGV*GLKVVG
Trigger: CCCTACTACCTTCAGACCCAAGACCCCATAAAACTG...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACGGACTGAGTTCTGCTTaGGAGCTGGATGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHGLSSA*ELDVRF
Trigger: AAACCTGACATCCAGCTCCAAAGCAGAACTCAGTCC...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp ACTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCTCAGAGGATGACGTaGCTGAGAGATAATCAATGC +
Preference number: 5 (lower is better)
Translates to: TVWASPANPTCHGLWSLHSQRMT*LRDNQC
Trigger: GCATTGATTATCTCTCAGCAACGTCATCCTCTGAGA...ATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACAGGGTTCATGGTGCCTaGTCCCCGTTGCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHRVHGA*SPLLFL
Trigger: CAGAAACAGCAACGGGGACAAGGCACCATGAACCCT...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGTCCCAGGTTGCCACTTaGGCCTCAGTGTGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: KHQILMQNGALDRSWVLLSQVAT*ASVWRV
Trigger: AACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGA...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACGGATTTTTCTTTTTGTaGCACTGCGAACATTTCGTG +
Preference number: 5 (lower is better)
Translates to: RAHSAGWWNTYTLLTARNGFFFL*HCEHFV
Trigger: CACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC...GTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCCCCCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGATGGATTTTTCTTTTaGTTGCACTGCGAACATTTC +
Preference number: 5 (lower is better)
Translates to: PPPHYSTVRMIRRGIPPQDGFFF*LHCEHF
Trigger: GAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATC...TTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGGGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS TCA 90 bp CGTATTCGTCGTTGCTGGCCTTCTTTGTCCCCTGTAATACCCTGGTaGCCTTTGGAAAAATCCAAGTTCCTGAAAGAAGGTCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: RIRRCWPSLSPVIPW*PLEKSKFLKEGLNA
Trigger: GGCATTGAGACCTTCTTTCAGGAACTTGGATTTTTCCAAAGGTCACCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACGACGAATACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTAGGACTCTGCCTTCCTGTTCTACTTTCTaGTCTAAAGCGTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: ADHWRGQAELHAYSRTLPSCSTF*SKAYSK
Trigger: TTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGA...AGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CAA 90 bp AAGGTTTGCCTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: KVCLNFTPIRICSILCLAILCLA*QCCDLI
Trigger: AATCAGATCACAACACTGCAAGGCCAGGCAAAGAAT...GGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CAA 90 bp ACTGATTATAAGGCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTGCTGATAATTCCCAATaGGGAAGACTTCACACGGCA +
Preference number: 5 (lower is better)
Translates to: TDYKADHWRGQAELHAYSADNSQ*GRLHTA
Trigger: TGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGC...ACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATAATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CAA 90 bp ACTGATTATAAGGCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTGTCAGATGGTCTCCTTaGGAAGAAGCTAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: TDYKADHWRGQAELHAYSVRWSP*EEAKIA
Trigger: GGCTATCTTAGCTTCTTCCAAAGGAGACCATCTGAC...ACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATAATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCATTTAGAAAGTGCTTTTaGCAGATTAGTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPFRKCF*QISGGS
Trigger: GCTGCCTCCACTAATCTGCAAAAAGCACTTTCTAAA...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTTCTGTAGAGGACACTaGCACAGGATGCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHFCRGH*HRMPRK
Trigger: TTTTCTTGGCATCCTGTGCAAGTGTCCTCTACAGAA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTTCTGTAGAGGACACTaGCACAGGATGCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWFCRGH*HRMPRK
Trigger: TTTTCTTGGCATCCTGTGCAAGTGTCCTCTACAGAA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCGTTGCTGGCCTTCTTaGTCCCCTGTAATACCCTGG +
Preference number: 5 (lower is better)
Translates to: KHQILMQNGALDRSWVLLRCWPS*SPVIPW
Trigger: CCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATGGTATAGAGATCAAGCGTaGCTGTCGTATTCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LMQNGALDRSWVLLGVRWYRDQA*LSYSSL
Trigger: CAACGACGAATACGACAGCAACGCTTGATCTCTATA...CCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGTATAGAGATCAAGCGTaGCTGTCGTATTCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVYRDQA*LSYSSL
Trigger: CAACGACGAATACGACAGCAACGCTTGATCTCTATA...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTGGGAGACTGTTATCAGCAATCCATTaGCCTATAGAGATCAAGCGT +
Preference number: 5 (lower is better)
Translates to: AHVRAALNFTLKVEAGRLLSAIH*PIEIKR
Trigger: ACGCTTGATCTCTATAGGCAAATGGATTGCTGATAA...CAGTCTCCCAGCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACCACACTGAATCAGCCTaGGCTGATTATCAGCAATCC +
Preference number: 5 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHHTESA*ADYQQS
Trigger: GGATTGCTGATAATCAGCCAAGGCTGATTCAGTGTG...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGTCTTAATGTTTTCTTaGAAGGTAACCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEVLMFS*KVTTGF
Trigger: GAAGCCAGTGGTTACCTTCAAAGAAAACATTAAGAC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CCTCATTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGTCTTAATGTTTTCTTaGAAGGTAACCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PHYSTVRMIRRGIPPQESVLMFS*KVTTGF
Trigger: GAAGCCAGTGGTTACCTTCAAAGAAAACATTAAGAC...TGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGAGGAAAACTTCTTCCTaGGTCTCTGTTCACTTCTCG +
Preference number: 5 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGRKTSS*VSVHFS
Trigger: CGAGAAGTGAACAGAGACCAAGGAAGAAGTTTTCCT...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTGTGTGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTTGCTTGAGTTGGGGTTaGAGTTACAGGTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LCGPVLQTQHAMVYGAFICLSWG*SYRCFS
Trigger: AGAAAAACACCTGTAACTCAAACCCCAACTCAAGCA...AATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTCCTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCATGCTTGAGTTGGGGTTaGAGTTACAGGTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: VLQTQHAMVYGAFIPRLPCLSWG*SYRCFS
Trigger: AGAAAAACACCTGTAACTCAAACCCCAACTCAAGCA...TGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGAGTTACTTGCTTGAGTaGGGGTTTGAGTTACAGGTG +
Preference number: 5 (lower is better)
Translates to: GHREGAEEKHKRFHIAIGSYLLE*GFELQV
Trigger: CACCTGTAACTCAAACCCCAACTCAAGCAAGTAACT...CCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGGAGGCATCTGCCTGTaGATACTGCTGGAATCCAGA +
Preference number: 5 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRGGICL*ILLESR
Trigger: TCTGGATTCCAGCAGTATCAACAGGCAGATGCCTCC...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGCAGTTTTATGGGGTCTaGGGTCTGAAGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLQFYGV*GLKVVG
Trigger: CCCTACTACCTTCAGACCCAAGACCCCATAAAACTG...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCCCCTGCGGTCTATGTTaGCTTGCTGTGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: DGEFLMDFSFCCTANISCPCGLC*LAVPLQ
Trigger: CTGTAATGGCACAGCAAGCAAACATAGACCGCAGGG...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAACTGGCTGGCTGGTGTaGAATGATCTGAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRTGWLV*NDLNWQ
Trigger: CTGCCAGTTCAGATCATTCAACACCAGCCAGCCAGT...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAACAGAATTATGGTaGTGTGTTGGAGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGGTELW*CVGGEL
Trigger: CAGCTCTCCTCCAACACACAACCATAATTCTGTTCC...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTACTCCACAGTGAGGATGATAAGGCGAGGAATCCCGCCCCAAGAGTCAGAAAATCTCAGAGGATGACGTaGCTGAGAGATAATCAATGC +
Preference number: 5 (lower is better)
Translates to: LLHSEDDKARNPAPRVRKSQRMT*LRDNQC
Trigger: GCATTGATTATCTCTCAGCAACGTCATCCTCTGAGA...TTTTCTGACTCTTGGGGCGGGATTCCTCGCCTTATCATCCTCACTGTGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAACTGAGAAGTTCCCATaGGCTTCTCCCATCTGCCTT +
Preference number: 5 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRTEKFP*ASPICL
Trigger: AAGGCAGATGGGAGAAGCCAATGGGAACTTCTCAGT...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACGCTCCTGGATGTGCTTaGCTCTACAGCTGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHAPGCA*LYSCLP
Trigger: TGGAAGACAGCTGTAGAGCAAAGCACATCCAGGAGC...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS TCA 90 bp TCCCATCTGCAGCCAGCGACTCTATCACAGATGTTTCTTGCAGAATaGGGTTCTCTTTGGCTTCACTGGGGTCTTCCAGTATTAATTCTG +
Preference number: 5 (lower is better)
Translates to: SHLQPATLSQMFLAE*GSLWLHWGLPVLIL
Trigger: CAGAATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACATCTGTGATAGAGTCGCTGGCTGCAGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 90 bp GTTTTCACCTCATCTCGGCTTTCCAGTGCTTTAGAAAGTGCTTTTTaGAGATTAGTGGAGGCAGCTGGGAAAGGGAACTTCACAGCAATG +
Preference number: 5 (lower is better)
Translates to: VFTSSRLSSALESAF*RLVEAAGKGNFTAM
Trigger: CATTGCTGTGAAGTTCCCTTTCCCAGCTGCCTCCACTAATCTGCAAAAAGCACTTTCTAAAGCACTGGAAAGCCGAGATGAGGTGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507406.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp ACTTTCTTGTCTAAAGCGTATTCCAAATCGGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCCTGCCTGGATGTCCAGACTTCAGCT +
Preference number: 5 (lower is better)
Translates to: TFLSKAYSKSVTSIF*YRSCRACLDVQTSA
Trigger: AGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTACCGATTTGGAATACGCTTTAGACAAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000367538.1
ENST00000419169.5
ENST00000440812.7
ENST00000444547.6
ENST00000507469.5
ENST00000507691.6
ENST00000508461.5
ENST00000515829.6
ENST00000638826.1
CDS CCA 90 bp TCCTCTGGAAGTGGTGTCGCACTAATACTTGAGAGGTCCTCTTCATaGGGATGGAAACTATTCAGAAGAGAAATCAACCAGGGCCAAATG +
Preference number: 5 (lower is better)
Translates to: SSGSGVALILERSSS*GWKLFRREINQGQM
Trigger: CATTTGGCCCTGGTTGATTTCTCTTCTGAATAGTTTCCATCCCCATGAAGAGGACCTCTCAAGTATTAGTGCGACACCACTTCCAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp CAGTCCTTCTATCCCTGTTATCTGGAGTCCCAATGGGTCCAAAATTaGAGAATGGAACAGAATTATGGTTGTGTGTTGGAGGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QSFYPCYLESQWVQN*RMEQNYGCVLEESW
Trigger: CCAGCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATAGAAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ACTGATTATAAGGCTGACCATTGGAGGGGACAAGCTGAGCTGCATGCCTATAGTATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: TDYKADHWRGQAELHAYSILCLA*QCCDLI
Trigger: AATCAGATCACAACACTGCAAGGCCAGGCAAAGAAT...ACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATAATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS-3UTR CAA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: RAQESVTVQTLECCSCLNILCLA*QCCDLI
Trigger: AATCAGATCACAACACTGCAAGGCCAGGCAAAGAAT...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWILCLA*QCCDLI
Trigger: AATCAGATCACAACACTGCAAGGCCAGGCAAAGAAT...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAGCTGATAATTCCCAATaGGGAAGACTTCACACGGCA +
Preference number: 5 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQADNSQ*GRLHTA
Trigger: TGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGC...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATTTCTGTAGAGGACACTaGCACAGGATGCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: RAQESVTVQTLECCSCLNFCRGH*HRMPRK
Trigger: TTTTCTTGGCATCCTGTGCAAGTGTCCTCTACAGAA...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATATAGAGATCAAGCGTaGCTGTCGTATTCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: FSFCCTANISCTLSGLVEYRDQA*LSYSSL
Trigger: CAACGACGAATACGACAGCAACGCTTGATCTCTATA...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAAACAGATATCACAGATGTTTCTaGCAGAATGAGGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: AHSAGWWNTYTLLTARNRYHRCF*QNEVLF
Trigger: AAAGAGAACCTCATTCTGCAAGAAACATCTGTGATA...TCTGTTTCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGCCTGATGGGCACATGTCCGTGCTGCCTTGAATTTCACTCTGAAAGTGGAGGCTATCACAGATGTTTCTaGCAGAATGAGGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: CLMGTCPCCLEFHSESGGYHRCF*QNEVLF
Trigger: AAAGAGAACCTCATTCTGCAAGAAACATCTGTGATA...GCCTCCACTTTCAGAGTGAAATTCAAGGCAGCACGGACATGTGCCCATCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp ACTGCTGGACCCCATGCTGTTGCTTCTTGGGGAGATGTGATGTTGCACACATTACCTGTGTCACAGTTGTaGCTTAAATTTCGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: TAGPHAVASWGDVMLHTLPVSQL*LKFRLV
Trigger: TACAAGCCGAAATTTAAGCAACAACTGTGACACAGG...TAATGTGTGCAACATCACATCTCCCCAAGAAGCAACAGCATGGGGTCCAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTCTCCTGTGTCACAGTaGTTGCTTAAATTTCGGCTT +
Preference number: 5 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHSPVSQ*LLKFRL
Trigger: AAGCCGAAATTTAAGCAACAACTGTGACACAGGAGA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ACTGGGAGTGAGATGGTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGTGCTTGAGTTGGGGTTaGAGTTACAGGTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: TGSEMVNLVSLSRAQESVCLSWG*SYRCFS
Trigger: AGAAAAACACCTGTAACTCAAACCCCAACTCAAGCA...CACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTACCATCTCACTCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGAGTTACTTGCTTGAGTaGGGGTTTGAGTTACAGGTG +
Preference number: 5 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWSYLLE*GFELQV
Trigger: CACCTGTAACTCAAACCCCAACTCAAGCAAGTAACT...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAACTGGGAGTTACTTGCTaGAGTTGGGGTTTGAGTTAC +
Preference number: 5 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQLGVTC*SWGLSY
Trigger: GTAACTCAAACCCCAACTCAAGCAAGTAACTCCCAG...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGGATGGATTTTTCTTTTaGTTGCACTGCGAACATTTC +
Preference number: 5 (lower is better)
Translates to: ISCTLSGLVEYLHPLDSEDGFFF*LHCEHF
Trigger: GAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATC...CTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTCGTGCACACTCAGCGGGCTGGTGGAATACTTACACCCTCTTGACAGCGAGAGATGGATTTTTCTTTTaGTTGCACTGCGAACATTTC +
Preference number: 5 (lower is better)
Translates to: FRAHSAGWWNTYTLLTARDGFFF*LHCEHF
Trigger: GAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATC...TCTCGCTGTCAAGAGGGTGTAAGTATTCCACCAGCCCGCTGAGTGTGCACGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS TCA 90 bp TATCAGCCATGCTGTAGGAAGAATCCCAGTAGAATTCTGGGACCTTaGCTTCTGAGGGATTATGGTTATATGGCTCCATGGGAAAAGGCT +
Preference number: 5 (lower is better)
Translates to: YQPCCRKNPSRILGP*LLRDYGYMAPWEKA
Trigger: AGCCTTTTCCCATGGAGCCATATAACCATAATCCCTCAGAAGTCAAGGTCCCAGAATTCTACTGGGATTCTTCCTACAGCATGGCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 90 bp TCCACCGATCTGCAGTCCTTCTATCCCTGTTATCTGGAGTCCCAATaGGTCCAAAATTGGAGAATGGAACAGAATTATGGTTGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: STDLQSFYPCYLESQ*VQNWRMEQNYGCVL
Trigger: CAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATAGAAGGACTGCAGATCGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAAATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQILCLA*QCCDLI
Trigger: AATCAGATCACAACACTGCAAGGCCAGGCAAAGAAT...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GACGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCGGAACAGAGAAAGGTTaGCCTGAACTTCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: DGEFLMDFSFCCTANISCGTEKG*PELHSD
Trigger: ATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCC...GCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGGAACAGAGAAAGGTTaGCCTGAACTTCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRGTEKG*PELHSD
Trigger: ATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCC...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTTTTAGAAAGTGCTTTTaGCAGATTAGTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGFRKCF*QISGGS
Trigger: GCTGCCTCCACTAATCTGCAAAAAGCACTTTCTAAA...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCTTATCAGCAATCCATTaGCCTATAGAGATCAAGCGT +
Preference number: 5 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGLSAIH*PIEIKR
Trigger: ACGCTTGATCTCTATAGGCAAATGGATTGCTGATAA...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTCCTGTGTCACAGTTGTaGCTTAAATTTCGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGPVSQL*LKFRLV
Trigger: TACAAGCCGAAATTTAAGCAACAACTGTGACACAGG...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACGTAATTTGAAATCCTACAGCAGTCTACCTGCTAGTCCAGCCCAGCACCACTCTCCTGTGTCACAGTaGTTGCTTAAATTTCGGCTT +
Preference number: 5 (lower is better)
Translates to: KRNLKSYSSLPASPAQHHSPVSQ*LLKFRL
Trigger: AAGCCGAAATTTAAGCAACAACTGTGACACAGGAGA...GTGGTGCTGGGCTGGACTAGCAGGTAGACTGCTGTAGGATTTCAAATTACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTGCCACTTTGGCGTCTTAATGTTTTCTTaGAAGGTAACCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: KPNMPWFMEPSFPGCHFGVLMFS*KVTTGF
Trigger: GAAGCCAGTGGTTACCTTCAAAGAAAACATTAAGAC...GCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AGGGCGCAAGAATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATTGCTTGAGTTGGGGTTaGAGTTACAGGTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: RAQESVTVQTLECCSCLNCLSWG*SYRCFS
Trigger: AGAAAAACACCTGTAACTCAAACCCCAACTCAAGCA...ATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGATTCTTGCGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTGGAATGCTTGAGTTGGGGTTaGAGTTACAGGTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: FSFCCTANISCTLSGLVECLSWG*SYRCFS
Trigger: AGAAAAACACCTGTAACTCAAACCCCAACTCAAGCA...TTCCACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAATCTCAGAGGATGACGTaGCTGAGAGATAATCAATGC +
Preference number: 5 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQSQRMT*LRDNQC
Trigger: GCATTGATTATCTCTCAGCAACGTCATCCTCTGAGA...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTCCATGCTGTTGCTTCTaGGGGAGATGTGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCPCCCF*GRCDVA
Trigger: TGCAACATCACATCTCCCCAAGAAGCAACAGCATGG...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGAGTAAACCTGGTTAGCTaGTCTAGGGCGCAAGAATCA +
Preference number: 5 (lower is better)
Translates to: LKHTNWVKVVGKRLGKRRVNLVS*SRAQES
Trigger: TGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC...TCTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAACAGCAGCTGCAGGTCTaGCACAGACAAAAACAAAAA +
Preference number: 5 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQQQLQV*HRQKQK
Trigger: TTTTTGTTTTTGTCTGTGCAAGACCTGCAGCTGCTG...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAAGGTGGACACAGGGAAGGGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCTGGGATTTTACCTCTTaGGGAGGAAAACTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: KGGHREGAEEKHKRFHIAWDFTS*GGKLLP
Trigger: AGGAAGAAGTTTTCCTCCCAAAGAGGTAAAATCCCA...GGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCCCTTCCCTGTGTCCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTCCTGTTCTACTTTCTaGTCTAAAGCGTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHSCSTF*SKAYSK
Trigger: TTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCCTTGCAGTGTTGTGATCTGATTCTTAAAGGCGTGATTCCAGCTGAAAACAAAGCTGATAATTCCCAATaGGGAAGACTTCACACGGCA +
Preference number: 5 (lower is better)
Translates to: ALQCCDLILKGVIPAENKADNSQ*GRLHTA
Trigger: TGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGC...TTTGTTTTCAGCTGGAATCACGCCTTTAAGAATCAGATCACAACACTGCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CAA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATTTAGAAAGTGCTTTTaGCAGATTAGTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRFRKCF*QISGGS
Trigger: GCTGCCTCCACTAATCTGCAAAAAGCACTTTCTAAA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACTATAGAGATCAAGCGTaGCTGTCGTATTCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHYRDQA*LSYSSL
Trigger: CAACGACGAATACGACAGCAACGCTTGATCTCTATA...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTTATCAGCAATCCATTaGCCTATAGAGATCAAGCGT +
Preference number: 5 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWLSAIH*PIEIKR
Trigger: ACGCTTGATCTCTATAGGCAAATGGATTGCTGATAA...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCACACTGAATCAGCCTaGGCTGATTATCAGCAATCC +
Preference number: 5 (lower is better)
Translates to: KHQILMQNGALDRSWVLLHTESA*ADYQQS
Trigger: GGATTGCTGATAATCAGCCAAGGCTGATTCAGTGTG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GGGCTGAAGAGAAGCACAAAAGGTTTCATATTGCCATTGGGTAGGGGGCTTCACTATCACAGATGTTTCTaGCAGAATGAGGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GLKRSTKGFILPLGRGLHYHRCF*QNEVLF
Trigger: AAAGAGAACCTCATTCTGCAAGAAACATCTGTGATA...GTGAAGCCCCCTACCCAATGGCAATATGAAACCTTTTGTGCTTCTCTTCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGCCTGTGTCACAGTTGTaGCTTAAATTTCGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLPVSQL*LKFRLV
Trigger: TACAAGCCGAAATTTAAGCAACAACTGTGACACAGG...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATCAGTGACAGTTCAAACACTGGAATGTTGCAGCTGCCTGAATGCAGAGCTCAATCTCCTGTGTCACAGTaGTTGCTTAAATTTCGGCTT +
Preference number: 5 (lower is better)
Translates to: ISDSSNTGMLQLPECRAQSPVSQ*LLKFRL
Trigger: AAGCCGAAATTTAAGCAACAACTGTGACACAGGAGA...TTGAGCTCTGCATTCAGGCAGCTGCAACATTCCAGTGTTTGAACTGTCACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GTAAACCTGGTTAGCTTGTCTAGGGCGCAAGAATCAGTGACAGTTCAAACACTGTGGGATTTTACCTCTTaGGGAGGAAAACTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VNLVSLSRAQESVTVQTLWDFTS*GGKLLP
Trigger: AGGAAGAAGTTTTCCTCCCAAAGAGGTAAAATCCCA...CAGTGTTTGAACTGTCACTGATTCTTGCGCCCTAGACAAGCTAACCAGGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS GCA 90 bp GGACCCAGCTTAGAATCTGTCATGTCAGCCTTCAGGACTTCTGCCTaGCTAATATTACTTGATTTCAGATGCTCCTCTGATTTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: GPSLESVMSAFRTSA*LILLDFRCSSDFKF
Trigger: AAACTTGAAATCAGAGGAGCATCTGAAATCAAGTAATATTAGGCAGGCAGAAGTCCTGAAGGCTGACATGACAGATTCTAAGCTGGGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000502375.1
ENST00000507691.6
CDS GCA 90 bp AGAAGATGTGAATTCAAATCTGTTAACACCAAGACACCGCCTAAGTaGCAGTTGCCACAGGTGCATAGAATCCTCCTTTTAGATCAAACC +
Preference number: 5 (lower is better)
Translates to: RRCEFKSVNTKTPPK*QLPQVHRILLLDQT
Trigger: GGTTTGATCTAAAAGGAGGATTCTATGCACCTGTGGCAACTGGCACTTAGGCGGTGTCTTGGTGTTAACAGATTTGAATTCACATCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS-3UTR CAA 90 bp GGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTTCCTGTTCTACTTTCTaGTCTAAAGCGTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: GFFFLLHCEHFVHTQRAGSCSTF*SKAYSK
Trigger: TTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGA...ACCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCTTCTTGGGGAGATGTGATGTTGCACACATTAGGAATAAAAACAATTACTAGCGATTTGCTCGATTCTTaGCCTGGCCTTGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: ASWGDVMLHTLGIKTITSDLLDS*PGLAVL
Trigger: CAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATC...GCTAGTAATTGTTTTTATTCCTAATGTGTGCAACATCACATCTCCCCAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTTTCTGTAGAGGACACTaGCACAGGATGCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCFCRGH*HRMPRK
Trigger: TTTTCTTGGCATCCTGTGCAAGTGTCCTCTACAGAA...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGATTATCAGCAATCCATTaGCCTATAGAGATCAAGCGT +
Preference number: 5 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRLSAIH*PIEIKR
Trigger: ACGCTTGATCTCTATAGGCAAATGGATTGCTGATAA...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACACTCAGCGGGCTGGTATCACAGATGTTTCTaGCAGAATGAGGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: WIFLFVALRTFRAHSAGWYHRCF*QNEVLF
Trigger: AAAGAGAACCTCATTCTGCAAGAAACATCTGTGATA...CCAGCCCGCTGAGTGTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCTCAAACACACAAACTGGGTAAAGGTAGTAGGAAAAAGGCTTGGGAAGAGGAGGTCTTAATGTTTTCTTaGAAGGTAACCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: AQTHKLGKGSRKKAWEEEVLMFS*KVTTGF
Trigger: GAAGCCAGTGGTTACCTTCAAAGAAAACATTAAGAC...CTCCTCTTCCCAAGCCTTTTTCCTACTACCTTTACCCAGTTTGTGTGTTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TTTCCTTGCTACACACTGACTAGAAGCACACCTGTGTATGGAAGAATTCAGTGTAGGAAAACTTCTTCCTaGGTCTCTGTTCACTTCTCG +
Preference number: 5 (lower is better)
Translates to: FPCYTLTRSTPVYGRIQCRKTSS*VSVHFS
Trigger: CGAGAAGTGAACAGAGACCAAGGAAGAAGTTTTCCT...ACACTGAATTCTTCCATACACAGGTGTGCTTCTAGTCAGTGTGTAGCAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATGGACTGAGTTCTGCTTaGGAGCTGGATGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: RVRKHSKHQILMQNGALDGLSSA*ELDVRF
Trigger: AAACCTGACATCCAGCTCCAAAGCAGAACTCAGTCC...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp ATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGGGAGTGAGAGGATTTTTCTTTTTGTaGCACTGCGAACATTTCGTG +
Preference number: 5 (lower is better)
Translates to: ILMQNGALDRSWVLLGVRGFFFL*HCEHFV
Trigger: CACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC...TCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS TCA 90 bp GAACCAAAGCAAAAGCATGCCTGTATTCGCCCACTGAGTACAATTTaGGGCTCAGAAGATGTGAATTCAAATCTGTTAACACCAAGACAC +
Preference number: 5 (lower is better)
Translates to: EPKQKHACIRPLSTI*GSEDVNSNLLTPRH
Trigger: GTGTCTTGGTGTTAACAGATTTGAATTCACATCTTCTGAGCCTCAAATTGTACTCAGTGGGCGAATACAGGCATGCTTTTGCTTTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS GCA 90 bp ATAAGCCAGCCAATACCTGTCATGTCAGCCTTCAGGACTTCTGCCTaGCTAATATTACTTGATTTCAGATGCTCCTCTGATTTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: ISQPIPVMSAFRTSA*LILLDFRCSSDFKF
Trigger: AAACTTGAAATCAGAGGAGCATCTGAAATCAAGTAATATTAGGCAGGCAGAAGTCCTGAAGGCTGACATGACAGGTATTGGCTGGCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493609.1
CDS-3UTR CAA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATCACACTGAATCAGCCTaGGCTGATTATCAGCAATCC +
Preference number: 5 (lower is better)
Translates to: RVRKHSKHQILMQNGALDHTESA*ADYQQS
Trigger: GGATTGCTGATAATCAGCCAAGGCTGATTCAGTGTG...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp AAACACCAAATTCTCATGCAGAATGGGGCTTTAGATAGGAGCTGGGTATTACTGCCTGTGTCACAGTTGTaGCTTAAATTTCGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: KHQILMQNGALDRSWVLLPVSQL*LKFRLV
Trigger: TACAAGCCGAAATTTAAGCAACAACTGTGACACAGG...CAGTAATACCCAGCTCCTATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS CCA 90 bp CTTGATTTCAGATGCTCCTCTGATTTCAAGTTTTCGGTCCTCATCTaGGACTTAAATGAAACGTTTTCTCCCACAATGACTATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: LDFRCSSDFKFSVLI*DLNETFSPTMTICK
Trigger: CTTGCAGATAGTCATTGTGGGAGAAAACGTTTCATTTAAGTCCCAGATGAGGACCGAAAACTTGAAATCAGAGGAGCATCTGAAATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367537.7
ENST00000493609.1
ENST00000502375.1
ENST00000507691.6
CDS-3UTR CAA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTAGTTACTTGCTTGAGTaGGGGTTTGAGTTACAGGTG +
Preference number: 5 (lower is better)
Translates to: CETACCATVKCTGIKNVISYLLE*GFELQV
Trigger: CACCTGTAACTCAAACCCCAACTCAAGCAAGTAACT...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS-3UTR CAA 90 bp CGGAGAGTTCCTGATGGATTTTTCTTTTTGTTGCACTGCGAACATTTCGTGCACGATGGATTTTTCTTTTaGTTGCACTGCGAACATTTC +
Preference number: 5 (lower is better)
Translates to: RRVPDGFFFLLHCEHFVHDGFFF*LHCEHF
Trigger: GAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATC...GTGCACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCCATCAGGAACTCTCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTCAGCAGCTGCAGGTCTaGCACAGACAAAAACAAAAA +
Preference number: 5 (lower is better)
Translates to: CETACCATVKCTGIKNVIQQLQV*HRQKQK
Trigger: TTTTTGTTTTTGTCTGTGCAAGACCTGCAGCTGCTG...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS CCA 90 bp ACTATGGCGCTGGTATGCGTCTGTTTATTGCTGATAATTCCCAATTaGGAAGACTTCACACGGCATGGTAAATCTACATTAAATACTGTA +
Preference number: 5 (lower is better)
Translates to: TMALVCVCLLLIIPN*EDFTRHGKSTLNTV
Trigger: TACAGTATTTAATGTAGATTTACCATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGCAATAAACAGACGCATACCAGCGCCATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000440812.7
ENST00000507406.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS-3UTR CAA 90 bp GCCTTGCAGTGTTGTGATCTGATTCTTAAAGGCGTGATTCCAGCTGAAAACAAATCCTGTTCTACTTTCTaGTCTAAAGCGTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: ALQCCDLILKGVIPAENKSCSTF*SKAYSK
Trigger: TTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGA...TTTGTTTTCAGCTGGAATCACGCCTTTAAGAATCAGATCACAACACTGCAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444547.6
CDS-3UTR CAA 90 bp AGAGTCAGAAAACATTCCAAACACCAAATTCTCATGCAGAATGGGGCTTTAGATGTCTTAATGTTTTCTTaGAAGGTAACCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: RVRKHSKHQILMQNGALDVLMFS*KVTTGF
Trigger: GAAGCCAGTGGTTACCTTCAAAGAAAACATTAAGAC...ATCTAAAGCCCCATTCTGCATGAGAATTTGGTGTTTGGAATGTTTTCTGACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000515829.6
CDS-3UTR CAA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTGGATTTTTCTTTTTGTaGCACTGCGAACATTTCGTG +
Preference number: 5 (lower is better)
Translates to: CETACCATVKCTGIKNVIGFFFL*HCEHFV
Trigger: CACGAAATGTTCGCAGTGCAACAAAAAGAAAAATCC...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS GCA 90 bp TTCTTAATATTAATCTTACCATACTATGGAACCAAAGCAAAAGCATaGCTGTATTCGCCCACTGAGTACAATTTGAGGCTCAGAAGATGT +
Preference number: 5 (lower is better)
Translates to: FLILILPYYGTKAKA*LYSPTEYNLRLRRC
Trigger: ACATCTTCTGAGCCTCAAATTGTACTCAGTGGGCGAATACAGGCATGCTTTTGCTTTGGTTCCATAGTATGGTAAGATTAATATTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS-3UTR CAA 90 bp TGTGAGACTGCTTGCTGTGCGACTGTAAAATGTACAGGAATCAAAAACGTAATTTCCTGTTCTACTTTCTaGTCTAAAGCGTATTCCAAA +
Preference number: 5 (lower is better)
Translates to: CETACCATVKCTGIKNVISCSTF*SKAYSK
Trigger: TTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGA...AATTACGTTTTTGATTCCTGTACATTTTACAGTCGCACAGCAAGCAGTCTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000515829.6
CDS GCA 90 bp TTGTCATTATCATTTTATAGTTATTACTCCTCCCAGCAATCCTCTTaGAATATACATATAGGGATCCACACACGTCAATACTTTCATGTC +
Preference number: 5 (lower is better)
Translates to: LSLSFYSYYSSQQSS*NIHIGIHTRQYFHV
Trigger: GACATGAAAGTATTGACGTGTGTGGATCCCTATATGTATATTGCAAGAGGATTGCTGGGAGGAGTAATAACTATAAAATGATAATGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502375.1
CDS TCA 72 bp CCATGGCCTGTCCAGGTGCCACTCGGAGTGCTGGCCTaGTGCCAACTGCTCTCAGAGGATGACGTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PWPVQVPLGVLA*CQLLSEDDVAE
Trigger: CTCAGCAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCTGGACAGGCCATGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp AGGAATCCTCCATGGAAGGGCCATGGCCTGTCCAGGTaGCACTCGGAGTGCTGGCCTGATGCCAACTGCTCT +
Preference number: 6 (lower is better)
Translates to: RNPPWKGHGLSR*HSECWPDANCS
Trigger: AGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGAGGATTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp AAGGGCCATGGCCTGTCCAGGTGCCACTCGGAGTGCTaGCCTGATGCCAACTGCTCTCAGAGGATGACGTTG +
Preference number: 6 (lower is better)
Translates to: KGHGLSRCHSEC*PDANCSQRMTL
Trigger: CAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCTGGACAGGCCATGGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp GGGGTTGCTGGGAAGGTGGCTGTGATTGTTGAGGTCCCTGGTTCATaGGCCCTGGTCCAGAGGGCCGTTGCTGGCTGTAAGGAATGTGGG +
Preference number: 6 (lower is better)
Translates to: GVAGKVAVIVEVPGS*ALVQRAVAGCKECG
Trigger: CCCACATTCCTTACAGCCAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCTCAACAATCACAGCCACCTTCCCAGCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp GCAGAGGGGAGCTCTTGGGGTCCTCAAACGGCATTCTaGGTACAGGATCCTGCTCTGGACGGAAGACTCCTG +
Preference number: 6 (lower is better)
Translates to: AEGSSWGPQTAF*VQDPALDGRLL
Trigger: CAGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGGACCCCAAGAGCTCCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
CDS CCA 72 bp GTCCTGCAGAGCCTGCCTGGATGTCCAGACTTCAGCTaGACCCAGCTTAGAATCGGAGGTACTGCGCGCTCT +
Preference number: 6 (lower is better)
Translates to: VLQSLPGCPDFS*TQLRIGGTARS
Trigger: AGAGCGCGCAGTACCTCCGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419169.5
ENST00000508461.5
CDS CAA 72 bp AGGTCCCTGGTTCATTGGCCCTGGTCCAGAGGGCCGTaGCTGGCTGTAAGGAATGTGGGACTGTTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: RSLVHWPWSRGP*LAVRNVGLFPS
Trigger: GCTGGGAAACAGTCCCACATTCCTTACAGCCAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp GGGAAGGTGGCTGTGATTGTTGAGGTCCCTGGTTCATaGGCCCTGGTCCAGAGGGCCGTTGCTGGCTGTAAG +
Preference number: 6 (lower is better)
Translates to: GKVAVIVEVPGS*ALVQRAVAGCK
Trigger: CTTACAGCCAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCTCAACAATCACAGCCACCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS TCA 72 bp GGGTACAGGATCCTGCTCTGGACGGAAGACTCCTGGTaGCCGTTTGCCCCTGCGGTCTATGTTTGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: GYRILLWTEDSW*PFAPAVYVCLL
Trigger: CAGCAAGCAAACATAGACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS TCA 72 bp CCCTCTCGCGAGATTTCAGCAGCGCCTGTCCCTCAGTaGTTTCCGCCTCTCTGTAGCGCTCCCTTTTGGGAT +
Preference number: 6 (lower is better)
Translates to: PSREISAAPVPQ*FPPLCSAPFWD
Trigger: ATCCCAAAAGGGAGCGCTACAGAGAGGCGGAAATCACTGAGGGACAGGCGCTGCTGAAATCTCGCGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS GCA 72 bp TTGGGGTCCTCAAACGGCATTCTGGGTACAGGATCCTaGTCTGGACGGAAGACTCCTGGTGACCGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: LGSSNGILGTGS*SGRKTPGDRLP
Trigger: GGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGGACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
CDS CCA 72 bp CATCACCAGCTCCCACTATGGACTATGCTGGTGACCTaGAGCCGGCCCACAAGAAGGGGTGAGTTATATGGC +
Preference number: 6 (lower is better)
Translates to: HHQLPLWTMLVT*SRPTRRGELYG
Trigger: GCCATATAACTCACCCCTTCTTGTGGGCCGGCTCCAGGTCACCAGCATAGTCCATAGTGGGAGCTGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS CAA 72 bp GGATCCTGCTCTGGACGGAAGACTCCTGGTGACCGTTaGCCCCTGCGGTCTATGTTTGCTTGCTGTGCCATT +
Preference number: 6 (lower is better)
Translates to: GSCSGRKTPGDR*PLRSMFACCAI
Trigger: AATGGCACAGCAAGCAAACATAGACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS TCA 72 bp TATGCTGGTGACCTGGAGCCGGCCCACAAGAAGGGGTaGGTTATATGGCACAATGTCTCCAAGGTGGACGAG +
Preference number: 6 (lower is better)
Translates to: YAGDLEPAHKKG*VIWHNVSKVDE
Trigger: CTCGTCCACCTTGGAGACATTGTGCCATATAACTCACCCCTTCTTGTGGGCCGGCTCCAGGTCACCAGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS TCA 72 bp TCATGCATCACCAGCTCCCACTATGGACTATGCTGGTaGCCTGGAGCCGGCCCACAAGAAGGGGTGAGTTAT +
Preference number: 6 (lower is better)
Translates to: SCITSSHYGLCW*PGAGPQEGVSY
Trigger: ATAACTCACCCCTTCTTGTGGGCCGGCTCCAGGTCACCAGCATAGTCCATAGTGGGAGCTGGTGATGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440812.7
CDS GCA 72 bp GATCCTGCTCTGGACGGAAGACTCCTGGTGACCGTTTaGCCCTGCGGTCTATGTTTGCTTGCTGTGCCATTA +
Preference number: 6 (lower is better)
Translates to: DPALDGRLLVTV*PCGLCLLAVPL
Trigger: TAATGGCACAGCAAGCAAACATAGACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp CCTCAGTGTGGAGGGTTCATGGTGCCTTGTCCCCGTTaGTGTTTCTGCTTCTGCTGCATTAACAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: PQCGGFMVPCPR*CFCFCCINSCS
Trigger: GGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCAACGGGGACAAGGCACCATGAACCCTCCACACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp GTCCTGCAGAGCCTGCCTGGATGTCCAGACTTCAGCTaGACCCAGCTTAGAATCTGTCATGTCAGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: VLQSLPGCPDFS*TQLRICHVSLQ
Trigger: CTGAAGGCTGACATGACAGATTCTAAGCTGGGTCCAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000367538.1
ENST00000440812.7
ENST00000444547.6
ENST00000507469.5
ENST00000507691.6
ENST00000515829.6
ENST00000638826.1
CDS CCA 72 bp GTGGGACTGTTTCCCAGCTTGCACCTGGTTTCCTGCTaGAGAGTGAGCTGTAGGCTGAAGAAAGGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: VGLFPSLHLVSC*RVSCRLKKGSW
Trigger: CCAGGAACCTTTCTTCAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp AGCCTTCATTCCCAGGTTGCCACTTTGGCCTCAGTGTaGAGGGTTCATGGTGCCTTGTCCCCGTTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: SLHSQVATLASV*RVHGALSPLLF
Trigger: AAACAGCAACGGGGACAAGGCACCATGAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp AGAGGGCCGTTGCTGGCTGTAAGGAATGTGGGACTGTTTCCCAGCTaGCACCTGGTTTCCTGCTGGAGAGTGAGCTGTAGGCTGAAGAAA +
Preference number: 6 (lower is better)
Translates to: RGPLLAVRNVGLFPS*HLVSCWRVSCRLKK
Trigger: TTTCTTCAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCACATTCCTTACAGCCAGCAACGGCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp CTGCAAACCCAACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTaGCCACTTTGGCCTCAGTGTGGAGGGTTCATGGTGCCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: LQTQHAMVYGAFIPR*PLWPQCGGFMVPCP
Trigger: GGGACAAGGCACCATGAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS TCA 72 bp CCAGACACGGTCGTTAGGGACACTTTAGGCTTTCCATaGGGACAGCAGAGGAATCCTCCATGGAAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: PDTVVRDTLGFP*GQQRNPPWKGH
Trigger: ATGGCCCTTCCATGGAGGATTCCTCTGCTGTCCTCATGGAAAGCCTAAAGTGTCCCTAACGACCGTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495321.1
CDS GCA 72 bp AAGGATTTCTCAAACGGCATTCTGGGTACAGGATCCTaGTCTGGACGGAAGACTCCTGGTGACCGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: KDFSNGILGTGS*SGRKTPGDRLP
Trigger: GGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGAAATCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000515829.6
CDS GCA 72 bp TCCAGGTGCCACTCGGAGTGCTGGCCTGATGCCAACTaGTCTCAGAGGATGACGTTGCTGAGAGATAATCAA +
Preference number: 6 (lower is better)
Translates to: SRCHSECWPDAN*SQRMTLLRDNQ
Trigger: TTGATTATCTCTCAGCAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp GGAGGGTTCATGGTGCCTTGTCCCCGTTGCTGTTTCTaGTTCTGCTGCATTAACAGCTGCTCCAGAGCAGAA +
Preference number: 6 (lower is better)
Translates to: GGFMVPCPRCCF*FCCINSCSRAE
Trigger: TTCTGCTCTGGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCAACGGGGACAAGGCACCATGAACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp ATGGGCCTTGAACCTGAGGGGGATTCCACAGCTGTTTaGAGGCATCTGCCTGTTGATACTGCTGGAATCCAG +
Preference number: 6 (lower is better)
Translates to: MGLEPEGDSTAV*RHLPVDTAGIQ
Trigger: CTGGATTCCAGCAGTATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATCCCCCTCAGGTTCAAGGCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp TGGGCCAGTCCTGCAAACCCAACATGCCATGGTTTATaGAGCCTTCATTCCCAGGTTGCCACTTTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: WASPANPTCHGL*SLHSQVATLAS
Trigger: TGAGGCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTTGGGTTTGCAGGACTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp TTGCTGGCTGTAAGGAATGTGGGACTGTTTCCCAGCTaGCACCTGGTTTCCTGCTGGAGAGTGAGCTGTAGG +
Preference number: 6 (lower is better)
Translates to: LLAVRNVGLFPS*HLVSCWRVSCR
Trigger: CCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCACATTCCTTACAGCCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp CACTCGGAGTGCTGGCCTGATGCCAACTGCTCTCAGAGGATGACGTaGCTGAGAGATAATCAATGCCAAACCCACCCATGGCTGGCTTAT +
Preference number: 6 (lower is better)
Translates to: HSECWPDANCSQRMT*LRDNQCQTHPWLAY
Trigger: ATAAGCCAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAGCAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp TGGGCTACGCAGATACTGCTGCTTCCTTCCTCTTCAGACTGTCTTTaGGGCCCCAACTGCTGGACCCCATGCTGTTGCTTCTTTAGGCTT +
Preference number: 6 (lower is better)
Translates to: WATQILLLPSSSDCL*GPNCWTPCCCFFRL
Trigger: AAGCCTAAAGAAGCAACAGCATGGGGTCCAGCAGTTGGGGCCCAAAAGACAGTCTGAAGAGGAAGGAAGCAGCAGTATCTGCGTAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507469.5
CDS GCA 72 bp GTAACTAGCATTTTCTGGTACAGGTCCTGCAGAGCCTaGCTGGATGTCCAGACTTCAGCTGGACCCAGCTTA +
Preference number: 6 (lower is better)
Translates to: VTSIFWYRSCRA*LDVQTSAGPSL
Trigger: TAAGCTGGGTCCAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000367538.1
ENST00000419169.5
ENST00000440812.7
ENST00000444547.6
ENST00000507469.5
ENST00000507691.6
ENST00000508461.5
ENST00000515829.6
ENST00000638826.1
CDS GCA 72 bp AATGTGGGACTGTTTCCCAGCTTGCACCTGGTTTCCTaGTGGAGAGTGAGCTGTAGGCTGAAGAAAGGTTCC +
Preference number: 6 (lower is better)
Translates to: NVGLFPSLHLVS*WRVSCRLKKGS
Trigger: GGAACCTTTCTTCAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp CCTGGTGACCGTTTGCCCCTGCGGTCTATGTTTGCTTaGTGTGCCATTACAGATCTGTTATCAGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: PGDRLPLRSMFA*CAITDLLSAML
Trigger: CAGCATGGCTGATAACAGATCTGTAATGGCACAGCAAGCAAACATAGACCGCAGGGGCAAACGGTCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp AACATGCCATGGTTTATGGAGCCTTCATTCCCAGGTTaGCACTTTGGCCTCAGTGTGGAGGGTTCATGGTGC +
Preference number: 6 (lower is better)
Translates to: NMPWFMEPSFPG*HFGLSVEGSWC
Trigger: GCACCATGAACCCTCCACACTGAGGCCAAAGTGGCAACCTGGGAATGAAGGCTCCATAAACCATGGCATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp GCTGAGCTGCATGCCTATAGTAGGACTCTGCCTGGCTaGTCTGGTTTCTGTATCGAGCAATGTCTCCAAGGT +
Preference number: 6 (lower is better)
Translates to: AELHAYSRTLPG*SGFCIEQCLQG
Trigger: ACCTTGGAGACATTGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507406.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp CCCTGGGCTCCCATCTGCAGCCAGCGACTCTATCACAGATGTTTCTaGCAGAATGAGGTTCTCTTTGGCTTCACTGGGGTCTTCCAGTAT +
Preference number: 6 (lower is better)
Translates to: PWAPICSQRLYHRCF*QNEVLFGFTGVFQY
Trigger: ATACTGGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACATCTGTGATAGAGTCGCTGGCTGCAGATGGGAGCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp TCCAAATCGGTAACTAGCATTTTCTGGTACAGGTCCTaGAGAGCCTGCCTGGATGTCCAGACTTCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: SKSVTSIFWYRS*RACLDVQTSAG
Trigger: TCCAGCTGAAGTCTGGACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTACCGATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000367538.1
ENST00000419169.5
ENST00000440812.7
ENST00000444547.6
ENST00000507469.5
ENST00000507691.6
ENST00000508461.5
ENST00000515829.6
ENST00000638826.1
CDS GCA 72 bp CCCACCCATGGCTGGCTTATCAGTTTTCCACCGATCTaGAGTCCTTCTATCCCTGTTATCTGGAGTCCCAAT +
Preference number: 6 (lower is better)
Translates to: PTHGWLISFPPI*SPSIPVIWSPN
Trigger: ATTGGGACTCCAGATAACAGGGATAGAAGGACTGCAGATCGGTGGAAAACTGATAAGCCAGCCATGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp AGGGCTTCTCCAATAAGGATTTCTCAAACGGCATTCTaGGTACAGGATCCTGCTCTGGACGGAAGACTCCTG +
Preference number: 6 (lower is better)
Translates to: RASPIRISQTAF*VQDPALDGRLL
Trigger: CAGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGAAATCCTTATTGGAGAAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347615.6
ENST00000515829.6
CDS CAA 72 bp GCCTATAGAGATCAAGCGTTGCTGTCGTATTCGTCGTaGCTGGCCTTCTTTGTCCCCTGTAATACCCTGGTG +
Preference number: 6 (lower is better)
Translates to: AYRDQALLSYSS*LAFFVPCNTLV
Trigger: CACCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACGACGAATACGACAGCAACGCTTGATCTCTATAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp CCCATCTGCAGCCAGCGACTCTATCACAGATGTTTCTaGCAGAATGAGGTTCTCTTTGGCTTCACTGGGGTC +
Preference number: 6 (lower is better)
Translates to: PICSQRLYHRCF*QNEVLFGFTGV
Trigger: GACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACATCTGTGATAGAGTCGCTGGCTGCAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp AGGCTGGAACCGGAGACTGAAAAGTTTCTGTGTCTCTaGTCTCTGCTCCTCGCTGGGCATCTGTTCCATTCT +
Preference number: 6 (lower is better)
Translates to: RLEPETEKFLCL*SLLLAGHLFHS
Trigger: AGAATGGAACAGATGCCCAGCGAGGAGCAGAGACAAGAGACACAGAAACTTTTCAGTCTCCGGTTCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495321.1
CDS GCA 72 bp AACCGGAGACTGAAAAGTTTCTGTGTCTCTTGTCTCTaGTCCTCGCTGGGCATCTGTTCCATTCTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: NRRLKSFCVSCL*SSLGICSILSE
Trigger: CTCAGAGAGAATGGAACAGATGCCCAGCGAGGAGCAGAGACAAGAGACACAGAAACTTTTCAGTCTCCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495321.1
CDS CAA 90 bp GGAGTCCCAATGGGTCCAAAATTGGAGAATGGAACAGAATTATGGTaGTGTGTTGGAGGAGAGCTGGGTAGGCTGCTTGGGTTAGAGGAA +
Preference number: 6 (lower is better)
Translates to: GVPMGPKLENGTELW*CVGGELGRLLGLEE
Trigger: TTCCTCTAACCCAAGCAGCCTACCCAGCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS TCA 72 bp CAGCCAGCGACTCTATCACAGATGTTTCTTGCAGAATaGGGTTCTCTTTGGCTTCACTGGGGTCTTCCAGTA +
Preference number: 6 (lower is better)
Translates to: QPATLSQMFLAE*GSLWLHWGLPV
Trigger: TACTGGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACATCTGTGATAGAGTCGCTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp TGCTCTCAGAGGATGACGTTGCTGAGAGATAATCAATaGCAAACCCACCCATGGCTGGCTTATCAGTTTTCC +
Preference number: 6 (lower is better)
Translates to: CSQRMTLLRDNQ*QTHPWLAYQFS
Trigger: GGAAAACTGATAAGCCAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAGCAACGTCATCCTCTGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000495321.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp TGCATTAACAGCTGCTCCAGAGCAGAAGGTCCAGGATaGATCATGGAACTGGACCAGATAGACTTTAGGCTT +
Preference number: 6 (lower is better)
Translates to: CINSCSRAEGPG*IMELDQIDFRL
Trigger: AAGCCTAAAGTCTATCTGGTCCAGTTCCATGATGCATCCTGGACCTTCTGCTCTGGAGCAGCTGTTAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp TCTAAAGCGTATTCCAAATCGGTAACTAGCATTTTCTaGTACAGGTCCTGCAGAGCCTGCCTGGATGTCCAG +
Preference number: 6 (lower is better)
Translates to: SKAYSKSVTSIF*YRSCRACLDVQ
Trigger: CTGGACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAAAATGCTAGTTACCGATTTGGAATACGCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000367538.1
ENST00000419169.5
ENST00000440812.7
ENST00000444547.6
ENST00000507469.5
ENST00000507691.6
ENST00000508461.5
ENST00000515829.6
ENST00000638826.1
CDS CAA 90 bp AATCCATTTGCCTATAGAGATCAAGCGTTGCTGTCGTATTCGTCGTaGCTGGCCTTCTTTGTCCCCTGTAATACCCTGGTGACCTTTGGA +
Preference number: 6 (lower is better)
Translates to: NPFAYRDQALLSYSS*LAFFVPCNTLVTFG
Trigger: TCCAAAGGTCACCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACGACGAATACGACAGCAACGCTTGATCTCTATAGGCAAATGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp CTGAACTTCACTCCGATTCGGATTTGCTCGATTCTTTGCCTGGCCTaGCAGTGTTGTGATCTGATTCTTAAAGGCGTGATTCCAGAGATC +
Preference number: 6 (lower is better)
Translates to: LNFTPIRICSILCLA*QCCDLILKGVIPEI
Trigger: GATCTCTGGAATCACGCCTTTAAGAATCAGATCACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000440812.7
ENST00000507469.5
ENST00000507691.6
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp GAGCTAGACTGTGGCTTCACTATGGCGCTGGTATGCGTCTGTTTATaGCTGATAATTCCCAATTGGGAAGACTTCACACGGCATGGTAAA +
Preference number: 6 (lower is better)
Translates to: ELDCGFTMALVCVCL*LIIPNWEDFTRHGK
Trigger: TTTACCATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGCAATAAACAGACGCATACCAGCGCCATAGTGAAGCCACAGTCTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000440812.7
ENST00000507406.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp CCTTGGCTGATTATCAGCAATCCATTTGCCTATAGAGATCAAGCGTaGCTGTCGTATTCGTCGTTGCTGGCCTTCTTTGTCCCCTGTAAT +
Preference number: 6 (lower is better)
Translates to: PWLIISNPFAYRDQA*LSYSSLLAFFVPCN
Trigger: ATTACAGGGGACAAAGAAGGCCAGCAACGACGAATACGACAGCAACGCTTGATCTCTATAGGCAAATGGATTGCTGATAATCAGCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp GCAGTCCTTCTATCCCTGTTATCTGGAGTCCCAATGGGTCCAAAATaGGAGAATGGAACAGAATTATGGTTGTGTGTTGGAGGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: AVLLSLLSGVPMGPK*ENGTELWLCVGGEL
Trigger: CAGCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATAGAAGGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp CAGGAGCTAGACTGTGGCTTCACTATGGCGCTGGTATaGGTCTGTTTATTGCTGATAATTCCCAATTGGGAA +
Preference number: 6 (lower is better)
Translates to: QELDCGFTMALV*VCLLLIIPNWE
Trigger: TTCCCAATTGGGAATTATCAGCAATAAACAGACGCATACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000440812.7
ENST00000507406.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp TTACAGGAGGTTGCAATGACGGCTCAAACAGTTTTATaGGGTCTTGGGTCTGAAGGTAGTAGGGCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: LQEVAMTAQTVL*GLGSEGSRAVS
Trigger: TGAAACAGCCCTACTACCTTCAGACCCAAGACCCCATAAAACTGTTTGAGCCGTCATTGCAACCTCCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp TGTGGCTTCACTATGGCGCTGGTATGCGTCTGTTTATaGCTGATAATTCCCAATTGGGAAGACTTCACACGG +
Preference number: 6 (lower is better)
Translates to: CGFTMALVCVCL*LIIPNWEDFTR
Trigger: CCGTGTGAAGTCTTCCCAATTGGGAATTATCAGCAATAAACAGACGCATACCAGCGCCATAGTGAAGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000440812.7
ENST00000507406.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp GCCAGCGACTCTATCACAGATGTTTCTTGCAGAATGAGGTTCTCTTaGGCTTCACTGGGGTCTTCCAGTATTAATTCTGGGATTTCTGTG +
Preference number: 6 (lower is better)
Translates to: ASDSITDVSCRMRFS*ASLGSSSINSGISV
Trigger: CACAGAAATCCCAGAATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACATCTGTGATAGAGTCGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp TTATCAGCAATCCATTTGCCTATAGAGATCAAGCGTTaGTGTCGTATTCGTCGTTGCTGGCCTTCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: LSAIHLPIEIKR*CRIRRCWPSLS
Trigger: GGACAAAGAAGGCCAGCAACGACGAATACGACAGCAACGCTTGATCTCTATAGGCAAATGGATTGCTGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp GGGCAGACACTGGTCCCCAGATCCTGTTCTACTTTCTaGTCTAAAGCGTATTCCAAATCGGTAACTAGCATT +
Preference number: 6 (lower is better)
Translates to: GQTLVPRSCSTF*SKAYSKSVTSI
Trigger: AATGCTAGTTACCGATTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGATCTGGGGACCAGTGTCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444547.6
ENST00000638826.1
CDS GCA 72 bp GAATTCAAATCTGTTAACACCAAGACACCGCCTAAGTaGCAGTTGCCACAGGTGCATAGAATCCTCCTTTTA +
Preference number: 6 (lower is better)
Translates to: EFKSVNTKTPPK*QLPQVHRILLL
Trigger: TAAAAGGAGGATTCTATGCACCTGTGGCAACTGGCACTTAGGCGGTGTCTTGGTGTTAACAGATTTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS CCA 72 bp ATGAATGGGGATGAACTGGGAGTTACTTGCTTGAGTTaGGGTTTGAGTTACAGGTGTTTTTCTGGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: MNGDELGVTCLS*GLSYRCFSGFR
Trigger: TCTGAAGCCAGAAAAACACCTGTAACTCAAACCCCAACTCAAGCAAGTAACTCCCAGTTCATCCCCATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp CTGCAGTCCTTCTATCCCTGTTATCTGGAGTCCCAATaGGTCCAAAATTGGAGAATGGAACAGAATTATGGT +
Preference number: 6 (lower is better)
Translates to: LQSFYPCYLESQ*VQNWRMEQNYG
Trigger: ACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATAGAAGGACTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp ATTATCAGCAATCCATTTGCCTATAGAGATCAAGCGTaGCTGTCGTATTCGTCGTTGCTGGCCTTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: IISNPFAYRDQA*LSYSSLLAFFV
Trigger: GACAAAGAAGGCCAGCAACGACGAATACGACAGCAACGCTTGATCTCTATAGGCAAATGGATTGCTGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp AAATCTGTTAACACCAAGACACCGCCTAAGTGCCAGTaGCCACAGGTGCATAGAATCCTCCTTTTAGATCAA +
Preference number: 6 (lower is better)
Translates to: KSVNTKTPPKCQ*PQVHRILLLDQ
Trigger: TTGATCTAAAAGGAGGATTCTATGCACCTGTGGCAACTGGCACTTAGGCGGTGTCTTGGTGTTAACAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS CAA 90 bp TTTTCTTTGAAGGTAACCACTGGCTTCTCTCCTGTGTCACAGTTGTaGCTTAAATTTCGGCTTGTAGATAGCACTGATTTTAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: FSLKVTTGFSPVSQL*LKFRLVDSTDFSPG
Trigger: CCCAGGGCTAAAATCAGTGCTATCTACAAGCCGAAATTTAAGCAACAACTGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CCA 72 bp TATCCCTGTTATCTGGAGTCCCAATGGGTCCAAAATTaGAGAATGGAACAGAATTATGGTTGTGTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: YPCYLESQWVQN*RMEQNYGCVLE
Trigger: CTCCAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp TCTATCACAGATGTTTCTTGCAGAATGAGGTTCTCTTaGGCTTCACTGGGGTCTTCCAGTATTAATTCTGGG +
Preference number: 6 (lower is better)
Translates to: SITDVSCRMRFS*ASLGSSSINSG
Trigger: CCCAGAATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACATCTGTGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp TTGAAGGTAACCACTGGCTTCTCTCCTGTGTCACAGTaGTTGCTTAAATTTCGGCTTGTAGATAGCACTGAT +
Preference number: 6 (lower is better)
Translates to: LKVTTGFSPVSQ*LLKFRLVDSTD
Trigger: ATCAGTGCTATCTACAAGCCGAAATTTAAGCAACAACTGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp CTATCCCTGTTATCTGGAGTCCCAATGGGTCCAAAATaGGAGAATGGAACAGAATTATGGTTGTGTGTTGGA +
Preference number: 6 (lower is better)
Translates to: LSLLSGVPMGPK*ENGTELWLCVG
Trigger: TCCAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 90 bp GGAACCAAAGCAAAAGCATGCCTGTATTCGCCCACTGAGTACAATTaGAGGCTCAGAAGATGTGAATTCAAATCTGTTAACACCAAGACA +
Preference number: 6 (lower is better)
Translates to: GTKAKACLYSPTEYN*RLRRCEFKSVNTKT
Trigger: TGTCTTGGTGTTAACAGATTTGAATTCACATCTTCTGAGCCTCAAATTGTACTCAGTGGGCGAATACAGGCATGCTTTTGCTTTGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS GCA 72 bp TTAGAATCTGTCATGTCAGCCTTCAGGACTTCTGCCTaGCTAATATTACTTGATTTCAGATGCTCCTCTGAT +
Preference number: 6 (lower is better)
Translates to: LESVMSAFRTSA*LILLDFRCSSD
Trigger: ATCAGAGGAGCATCTGAAATCAAGTAATATTAGGCAGGCAGAAGTCCTGAAGGCTGACATGACAGATTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367537.7
ENST00000502375.1
ENST00000507691.6
CDS GCA 72 bp TTAATCTTACCATACTATGGAACCAAAGCAAAAGCATaGCTGTATTCGCCCACTGAGTACAATTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: LILPYYGTKAKA*LYSPTEYNLRL
Trigger: GAGCCTCAAATTGTACTCAGTGGGCGAATACAGGCATGCTTTTGCTTTGGTTCCATAGTATGGTAAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS CCA 72 bp AGATGCTCCTCTGATTTCAAGTTTTCGGTCCTCATCTaGGACTTAAATGAAACGTTTTCTCCCACAATGACT +
Preference number: 6 (lower is better)
Translates to: RCSSDFKFSVLI*DLNETFSPTMT
Trigger: AGTCATTGTGGGAGAAAACGTTTCATTTAAGTCCCAGATGAGGACCGAAAACTTGAAATCAGAGGAGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367537.7
ENST00000493609.1
ENST00000502375.1
ENST00000507691.6
CDS CAA 72 bp AAGGTAACCACTGGCTTCTCTCCTGTGTCACAGTTGTaGCTTAAATTTCGGCTTGTAGATAGCACTGATTTT +
Preference number: 6 (lower is better)
Translates to: KVTTGFSPVSQL*LKFRLVDSTDF
Trigger: AAAATCAGTGCTATCTACAAGCCGAAATTTAAGCAACAACTGTGACACAGGAGAGAAGCCAGTGGTTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS CAA 72 bp GCAAAAGCATGCCTGTATTCGCCCACTGAGTACAATTaGAGGCTCAGAAGATGTGAATTCAAATCTGTTAAC +
Preference number: 6 (lower is better)
Translates to: AKACLYSPTEYN*RLRRCEFKSVN
Trigger: GTTAACAGATTTGAATTCACATCTTCTGAGCCTCAAATTGTACTCAGTGGGCGAATACAGGCATGCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS CAA 90 bp ATGTTTTCTTTGAAGGTAACCACTGGCTTCTCTCCTGTGTCACAGTaGTTGCTTAAATTTCGGCTTGTAGATAGCACTGATTTTAGCCCT +
Preference number: 6 (lower is better)
Translates to: MFSLKVTTGFSPVSQ*LLKFRLVDSTDFSP
Trigger: AGGGCTAAAATCAGTGCTATCTACAAGCCGAAATTTAAGCAACAACTGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAAAGAAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS TCA 72 bp CAAAAGCATGCCTGTATTCGCCCACTGAGTACAATTTaGGGCTCAGAAGATGTGAATTCAAATCTGTTAACA +
Preference number: 6 (lower is better)
Translates to: QKHACIRPLSTI*GSEDVNSNLLT
Trigger: TGTTAACAGATTTGAATTCACATCTTCTGAGCCTCAAATTGTACTCAGTGGGCGAATACAGGCATGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493045.1
CDS CCA 72 bp CTGGTATGCGTCTGTTTATTGCTGATAATTCCCAATTaGGAAGACTTCACACGGCATGGTAAATCTACATTA +
Preference number: 6 (lower is better)
Translates to: LVCVCLLLIIPN*EDFTRHGKSTL
Trigger: TAATGTAGATTTACCATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGCAATAAACAGACGCATACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347615.6
ENST00000367537.7
ENST00000419169.5
ENST00000440812.7
ENST00000507406.1
ENST00000507469.5
ENST00000508461.5
ENST00000515829.6
CDS GCA 72 bp TCATTTTATAGTTATTACTCCTCCCAGCAATCCTCTTaGAATATACATATAGGGATCCACACACGTCAATAC +
Preference number: 6 (lower is better)
Translates to: SFYSYYSSQQSS*NIHIGIHTRQY
Trigger: GTATTGACGTGTGTGGATCCCTATATGTATATTGCAAGAGGATTGCTGGGAGGAGTAATAACTATAAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502375.1
CDS CAA 90 bp ACTTCTCAAATGATAGGTAATACTTACAGATCCTGTTCTACTTTCTaGTCTAAAGCGTATTCCAAATCGGTAACTAGCATTTTCTGGTAC +
Preference number: 6 (lower is better)
Translates to: TSQMIGNTYRSCSTF*SKAYSKSVTSIFWY
Trigger: GTACCAGAAAATGCTAGTTACCGATTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGATCTGTAAGTATTACCTATCATTTGAGAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367538.1
CDS CAA 72 bp ATGATAGGTAATACTTACAGATCCTGTTCTACTTTCTaGTCTAAAGCGTATTCCAAATCGGTAACTAGCATT +
Preference number: 6 (lower is better)
Translates to: MIGNTYRSCSTF*SKAYSKSVTSI
Trigger: AATGCTAGTTACCGATTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGATCTGTAAGTATTACCTATCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367538.1