Pregenerated sensors for SMG6-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000278941

Ensembl transcript IDs: ENST00000624930.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATAATAGCTAAATTCTGGGACTGGTGGTTTTTGTGCTTCCAGATTTaGGTCACCAAAGCTCATCAATTCTCGGTTCTTACTCCCTGGCAG	+
Preference number: 5 (lower is better) Translates to: IIAKFWDWWFLCFQI*VTKAHQFSVLTPWQ Trigger: CTGCCAGGGAGTAAGAACCGAGAATTGATGAGCTTTGGTGACTCAAATCTGGAAGCACAAAAACCACCAGTCCCAGAATTTAGCTATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624930.1
CDS GCA 72 bp	TTGACCCTGACCTGGTCATCAGAACATTTAAAACCCTaGCAATCTGTCCTTCTCCCCTCTACTTCCACACCC	+
Preference number: 6 (lower is better) Translates to: LTLTWSSEHLKP*QSVLLPSTSTP Trigger: GGGTGTGGAAGTAGAGGGGAGAAGGACAGATTGGCAGGGTTTTAAATGTTCTGATGACCAGGTCAGGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624930.1
CDS TCA 72 bp	AAATTCTGGGACTGGTGGTTTTTGTGCTTCCAGATTTaGGTCACCAAAGCTCATCAATTCTCGGTTCTTACT	+
Preference number: 6 (lower is better) Translates to: KFWDWWFLCFQI*VTKAHQFSVLT Trigger: AGTAAGAACCGAGAATTGATGAGCTTTGGTGACTCAAATCTGGAAGCACAAAAACCACCAGTCCCAGAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624930.1

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