RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMCR8 (Homo sapiens)

Ensembl gene IDs: ENSG00000176994

Ensembl transcript IDs: ENST00000406438.5, ENST00000639332.2

Found 857 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCCAGGAGAGCTGCTaGCTGCTCCTCCCTTGCATGGTGGTGATGGCCTCATGGCGCCTC +
Preference number: 1 (lower is better)
Translates to: CALAGRSQWATQESC*LLLPCMVVMASWRL
Trigger: GAGGCGCCATGAGGCCATCACCACCATGCAAGGGAGGAGCAGCCAGCAGCTCTCCTGGGTGGCCCACTGGCTCCTGCCGGCCAGAGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp GGTGGCGAGGACAGCGGACAGGGTGCTGCTCACGCTCTGTGGCCCTaGGGCCAAGGTCGCATGTTTCCCACGACCCAGAGGGTGGCAGCC +
Preference number: 1 (lower is better)
Translates to: GGEDSGQGAAHALWP*GQGRMFPTTQRVAA
Trigger: GGCTGCCACCCTCTGGGTCGTGGGAAACATGCGACCTTGGCCTCAGGGCCACAGAGCGTGAGCAGCACCCTGTCCGCTGTCCTCGCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp TCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCCAGGAGAGCTaGTGGCTGCTCCTCCCTTGCATGGTGGTGATGGCCTCATGGCGC +
Preference number: 1 (lower is better)
Translates to: SCALAGRSQWATQES*WLLLPCMVVMASWR
Trigger: GCGCCATGAGGCCATCACCACCATGCAAGGGAGGAGCAGCCAGCAGCTCTCCTGGGTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp GGTCTGCAGACCTTCCCCACGAGGAAGGTCAGTGCTCATGCGCTCTaGCCGGCAGGAGCCAGTGGGCCACCCAGGAGAGCTGCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: GLQTFPTRKVSAHAL*PAGASGPPRRAAGC
Trigger: GCAGCCAGCAGCTCTCCTGGGTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGGGGAAGGTCTGCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp CCAGTGTGCTCCTCCCATCAGGCTTTGGCCTTCCTGCCCTCACCCTaGCCCACCAAGGGACTGGTGGCTTCCCTTCTGCCCTGGCTGCCA +
Preference number: 1 (lower is better)
Translates to: PVCSSHQALAFLPSP*PTKGLVASLLPWLP
Trigger: TGGCAGCCAGGGCAGAAGGGAAGCCACCAGTCCCTTGGTGGGGCAGGGTGAGGGCAGGAAGGCCAAAGCCTGATGGGAGGAGCACACTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp CCATGTTCACACGGGTCTGCAGACCTTCCCCACGAGGAAGGTCAGTaGTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCCAGGAG +
Preference number: 1 (lower is better)
Translates to: PCSHGSADLPHEEGQ*SCALAGRSQWATQE
Trigger: CTCCTGGGTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGGGGAAGGTCTGCAGACCCGTGTGAACATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp TGTGGCCCTGAGGCCAAGGTCGCATGTTTCCCACGACCCAGAGGGTaGCAGCCTTTCTCACCCCCACTGGCTGGTCCAGGGCCTCCCCTA +
Preference number: 1 (lower is better)
Translates to: CGPEAKVACFPRPRG*QPFSPPLAGPGPPL
Trigger: TAGGGGAGGCCCTGGACCAGCCAGTGGGGGTGAGAAAGGCTGCCACCCTCTGGGTCGTGGGAAACATGCGACCTTGGCCTCAGGGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp TCACACACGCGCCAGCTGCACTCCTGCACCAGCCGCTGCAACGACTaGACCTCACGTGGTGGCGGGGACTCACATTCACAAGACGGGACG +
Preference number: 1 (lower is better)
Translates to: SHTRQLHSCTSRCND*TSRGGGDSHSQDGT
Trigger: CGTCCCGTCTTGTGAATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp AGCAACACCTACGAGATGCTATCACACACGCGCCAGCTGCACTCCTaGACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGAC +
Preference number: 1 (lower is better)
Translates to: SNTYEMLSHTRQLHS*TSRCNDCTSRGGGD
Trigger: GTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTGATAGCATCTCGTAGGTGTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp CCAGCTGCACTCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTaGTGGCGGGGACTCACATTCACAAGACGGGACGGGAACATGCAG +
Preference number: 1 (lower is better)
Translates to: PAALLHQPLQRLHLT*WRGLTFTRRDGNMQ
Trigger: CTGCATGTTCCCGTCCCGTCTTGTGAATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp GAGATGCTATCACACACGCGCCAGCTGCACTCCTGCACCAGCCGCTaGAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTCACAA +
Preference number: 1 (lower is better)
Translates to: EMLSHTRQLHSCTSR*NDCTSRGGGDSHSQ
Trigger: TTGTGAATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTGATAGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp TCTTGTGCAGCAACACCTACGAGATGCTATCACACACGCGCCAGCTaGACTCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTG +
Preference number: 1 (lower is better)
Translates to: SCAATPTRCYHTRAS*TPAPAAATTAPHVV
Trigger: CACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTGATAGCATCTCGTAGGTGTTGCTGCACAAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp GTTTCAAACTTGTCCTCAGAAGGGGGACTCAACTGGGGACGGCCGTaGGCTGTGGTGACTGAGGTGCACACAGCCTCCCAGAGGCAGAAC +
Preference number: 1 (lower is better)
Translates to: VSNLSSEGGLNWGRP*AVVTEVHTASQRQN
Trigger: GTTCTGCCTCTGGGAGGCTGTGTGCACCTCAGTCACCACAGCTCACGGCCGTCCCCAGTTGAGTCCCCCTTCTGAGGACAAGTTTGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp TCCTACTGGCTGTGCAGACAAAGATGTGACAGCAGCACTAGATGCTaGCCCAACAAGCAGTGCTGGGCCTGGGCGGTGGGGCATGTTCAG +
Preference number: 1 (lower is better)
Translates to: SYWLCRQRCDSSTRC*PNKQCWAWAVGHVQ
Trigger: CTGAACATGCCCCACCGCCCAGGCCCAGCACTGCTTGTTGGGTCAGCATCTAGTGCTGCTGTCACATCTTTGTCTGCACAGCCAGTAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp AGTGGTTGCAAAGGTTTATGTGGGTGGGAGCTGGAGTGTGGCCTCTaGCATGTTCACACGGGTCTGCAGACCTTCCCCACGAGGAAGGTC +
Preference number: 1 (lower is better)
Translates to: SGCKGLCGWELECGL*HVHTGLQTFPTRKV
Trigger: GACCTTCCTCGTGGGGAAGGTCTGCAGACCCGTGTGAACATGGCAGAGGCCACACTCCAGCTCCCACCCACATAAACCTTTGCAACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp ATGAAGAACCACCTTGAGGGAGACCAGCCCTGCTTGCCACTTACATaGCTGCCCCTGAGACGGTCTGTTCTGTTCATGCCCCAGCAGCCT +
Preference number: 1 (lower is better)
Translates to: MKNHLEGDQPCLPLT*LPLRRSVLFMPQQP
Trigger: AGGCTGCTGGGGCATGAACAGAACAGACCGTCTCAGGGGCAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCCCTCAAGGTGGTTCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp GTGCTATTTGAGTTCTCATCGGCTGGGCCAACCACCTGCACCAGCTaGCTAAACAGAACCGTTGCTGTCCCAAGCCCACGAGACCCAGTG +
Preference number: 1 (lower is better)
Translates to: VLFEFSSAGPTTCTS*LNRTVAVPSPRDPV
Trigger: CACTGGGTCTCGTGGGCTTGGGACAGCAACGGTTCTGTTTAGTCAGCTGGTGCAGGTGGTTGGCCCAGCCGATGAGAACTCAAATAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp TCTCCAGCCCCCAAGGTGGTCCTCACCATTGGCTTTGGTCACTTGTaGCCGCTTCACACTAGGACTAGTGAACACTCTGCTCGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: SPAPKVVLTIGFGHL*PLHTRTSEHSARSW
Trigger: CCAGGAACGAGCAGAGTGTTCACTAGTCCTAGTGTGAAGCGGGCACAAGTGACCAAAGCCAATGGTGAGGACCACCTTGGGGGCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp GCAGAACCTGAAGAGCGCCACGTGGTAGCTCATCCAGGAAATCCGTaGTATTTGAGTTCTCATCGGCTGGGCCAACCACCTGCACCAGCT +
Preference number: 1 (lower is better)
Translates to: AEPEERHVVAHPGNP*YLSSHRLGQPPAPA
Trigger: AGCTGGTGCAGGTGGTTGGCCCAGCCGATGAGAACTCAAATAGCACGGATTTCCTGGATGAGCTACCACGTGGCGCTCTTCAGGTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp CGGGCCATGCCCTTAAAACGAGGACTTGGACAAGGAGGGAACCACTaGAGTGACGTGATGCAAGCCCTCTTCGGTCACTCTTGGCTTCCA +
Preference number: 1 (lower is better)
Translates to: RAMPLKRGLGQGGNH*SDVMQALFGHSWLP
Trigger: TGGAAGCCAAGAGTGACCGAAGAGGGCTTGCATCACGTCACTCCAGTGGTTCCCTCCTTGTCCAAGTCCTCGTTTTAAGGGCATGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp GGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCAATGCTaGATACAGCCAGTGTGCTCCTCCCATCAGGCTTTGGCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: GCHPRSFCHSSVRQC*IQPVCSSHQALAFL
Trigger: CAGGAAGGCCAAAGCCTGATGGGAGGAGCACACTGGCTGTATTCAGCATTGCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp AGGACAGTGGGCTCCAGGAAGCAAATAAAGGGCTGCATCTGGGTCTaGAGGAGGCGATGGGTGTTCTGCCCTCCTGTTTTCCACCAAACC +
Preference number: 1 (lower is better)
Translates to: RTVGSRKQIKGCIWV*RRRWVFCPPVFHQT
Trigger: GGTTTGGTGGAAAACAGGAGGGCAGAACACCCATCGCCTCCTTCAGACCCAGATGCAGCCCTTTATTTGCTTCCTGGAGCCCACTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp CATGCCCTTAAAACGAGGACTTGGACAAGGAGGGAACCACTGGAGTaGCGTGATGCAAGCCCTCTTCGGTCACTCTTGGCTTCCACCAGG +
Preference number: 1 (lower is better)
Translates to: HALKTRTWTRREPLE*RDASPLRSLLASTR
Trigger: CCTGGTGGAAGCCAAGAGTGACCGAAGAGGGCTTGCATCACGTCACTCCAGTGGTTCCCTCCTTGTCCAAGTCCTCGTTTTAAGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp TTGGCATTGACTCTGGTTAACTCTTGTGCAGCAACACCTACGAGATaGTATCACACACGCGCCAGCTGCACTCCTGCACCAGCCGCTGCA +
Preference number: 1 (lower is better)
Translates to: LALTLVNSCAATPTR*YHTRASCTPAPAAA
Trigger: TGCAGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTGATAGCATCTCGTAGGTGTTGCTGCACAAGAGTTAACCAGAGTCAATGCCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp ACACTAGGACTAGTGAACACTCTGCTCGTTCCTGGTGAAAGAGTATaGGGAGTGAGTCCCAAGGCCCGCTCACAGGCACTTCTCTCCCAG +
Preference number: 1 (lower is better)
Translates to: TLGLVNTLLVPGERV*GVSPKARSQALLSQ
Trigger: CTGGGAGAGAAGTGCCTGTGAGCGGGCCTTGGGACTCACTCCCCATACTCTTTCACCAGGAACGAGCAGAGTGTTCACTAGTCCTAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp CAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTaGGGCAATCCTACTGGCTGTGCAGACAAAGATGTGACAGCAGCA +
Preference number: 1 (lower is better)
Translates to: QFPQRPCTPSDKPPG*GNPTGCADKDVTAA
Trigger: TGCTGCTGTCACATCTTTGTCTGCACAGCCAGTAGGATTGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp GCTGCCATCTCCAGGGCTCGCTGTAAACAGCCTCCACTCTTGGGCTaGATAAGCACTCCCAAGAAGCTGGGCCCCTACCAACAGATTAAT +
Preference number: 1 (lower is better)
Translates to: AAISRARCKQPPLLG*ISTPKKLGPYQQIN
Trigger: ATTAATCTGTTGGTAGGGGCCCAGCTTCTTGGGAGTGCTTATTCAGCCCAAGAGTGGAGGCTGTTTACAGCGAGCCCTGGAGATGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp TGGGGTCTAGCCTGTCGGCGTTTGCTTTATTGTGGGTGGAGCAGCTaGTGCAGAATCTGTGAGTTGACTCACCAGTCCCTACAGTTCTGC +
Preference number: 1 (lower is better)
Translates to: WGLACRRLLYCGWSS*CRICELTHQSLQFC
Trigger: GCAGAACTGTAGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGACAGGCTAGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp CCTGCAATCTGGGGTCTAGCCTGTCGGCGTTTGCTTTATTGTGGGTaGAGCAGCTGCTGCAGAATCTGTGAGTTGACTCACCAGTCCCTA +
Preference number: 1 (lower is better)
Translates to: PAIWGLACRRLLYCG*SSCCRICELTHQSL
Trigger: TAGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGACAGGCTAGACCCCAGATTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp CTGTTCATGCCCCAGCAGCCTTTTGCCTTAGGTTTCAGGACCTTCTaGACCACCCTTGAGGGTGTGTGCCAGCAAATACCTCAAGTGGAC +
Preference number: 1 (lower is better)
Translates to: LFMPQQPFALGFRTF*TTLEGVCQQIPQVD
Trigger: GTCCACTTGAGGTATTTGCTGGCACACACCCTCAAGGGTGGTTCAGAAGGTCCTGAAACCTAAGGCAAAAGGCTGCTGGGGCATGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp GGTCTAGCCTGTCGGCGTTTGCTTTATTGTGGGTGGAGCAGCTGCTaGAGAATCTGTGAGTTGACTCACCAGTCCCTACAGTTCTGCTAC +
Preference number: 1 (lower is better)
Translates to: GLACRRLLYCGWSSC*RICELTHQSLQFCY
Trigger: GTAGCAGAACTGTAGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGACAGGCTAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp GCCTCTGCCTCCAGCGCAAGTAACAGACGTTTCACATTTAAAGGCTaGCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCAA +
Preference number: 1 (lower is better)
Translates to: ASASSASNRRFTFKG*QGIAGDSPVCEHAQ
Trigger: TTGCGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGTGAAACGTCTGTTACTTGCGCTGGAGGCAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp TGGGTGTTCTGCCCTCCTGTTTTCCACCAAACCACAACAGTTACCTaGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCAATG +
Preference number: 1 (lower is better)
Translates to: WVFCPPVFHQTTTVT*LSPSFILPLKCPAM
Trigger: CATTGCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAAACAGGAGGGCAGAACACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp CCAGCAGCCTTTTGCCTTAGGTTTCAGGACCTTCTGAACCACCCTTaGGGGTGTGTGCCAGCAAATACCTCAAGTGGACTTCTACTTAGG +
Preference number: 1 (lower is better)
Translates to: PAAFCLRFQDLLNHP*GCVPANTSSGLLLR
Trigger: CCTAAGTAGAAGTCCACTTGAGGTATTTGCTGGCACACACCCTCAAGGGTGGTTCAGAAGGTCCTGAAACCTAAGGCAAAAGGCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp TCGGCGTTTGCTTTATTGTGGGTGGAGCAGCTGCTGCAGAATCTGTaGGTTGACTCACCAGTCCCTACAGTTCTGCTACCAAAGTGGTCT +
Preference number: 1 (lower is better)
Translates to: SAFALLWVEQLLQNL*VDSPVPTVLLPKWS
Trigger: AGACCACTTTGGTAGCAGAACTGTAGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 90 bp CAACTTCAGCTTCTAGAAGGCCAAGTGTGGCTGCAATTCAGGATCTaGCCCAAACTCATCAGCCCTTCCCAAGTTTCCCAGGTGAGAACA +
Preference number: 1 (lower is better)
Translates to: QLQLLEGQVWLQFRI*PKLISPSQVSQVRT
Trigger: TGTTCTCACCTGGGAAACTTGGGAAGGGCTGATGAGTTTGGGGCAGATCCTGAATTGCAGCCACACTTGGCCTTCTAGAAGCTGAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp AGTTATGGCCTTGGAGGCCTAAGTAGACAGCAATTAACCAGCCAGTaGGAAAACGAATCAGCATCTAGAACAGGAGGGGAGGGAACCGTA +
Preference number: 1 (lower is better)
Translates to: SYGLGGLSRQQLTSQ*ENESASRTGGEGTV
Trigger: TACGGTTCCCTCCCCTCCTGTTCTAGATGCTGATTCGTTTTCTCACTGGCTGGTTAATTGCTGTCTACTTAGGCCTCCAAGGCCATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp GGCTTCCCAGTGTTAACTGCCTCTGCCCAAATCATGACTCAGTCCTaGTACCACGTCAAGATCCCTTTGAAAGGAAACATACTTTGCATC +
Preference number: 1 (lower is better)
Translates to: GFPVLTASAQIMTQS*YHVKIPLKGNILCI
Trigger: GATGCAAAGTATGTTTCCTTTCAAAGGGATCTTGACGTGGTACCAGGACTGAGTCATGATTTGGGCAGAGGCAGTTAACACTGGGAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp TGGCAACTGTTTTCAACCACTGAAGCAAAGAAGGTAAAGGCCAGATaGGGAATGAAAGGTAAGGTACTGTGGTCTATTTCCAAATTTGGG +
Preference number: 1 (lower is better)
Translates to: WQLFSTTEAKKVKAR*GMKGKVLWSISKFG
Trigger: CCCAAATTTGGAAATAGACCACAGTACCTTACCTTTCATTCCCCATCTGGCCTTTACCTTCTTTGCTTCAGTGGTTGAAAACAGTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 90 bp GCAAAGAAGGTAAAGGCCAGATGGGGAATGAAAGGTAAGGTACTGTaGTCTATTTCCAAATTTGGGAGCAATGTGTGTAACTTCAACTGT +
Preference number: 1 (lower is better)
Translates to: AKKVKARWGMKGKVL*SISKFGSNVCNFNC
Trigger: ACAGTTGAAGTTACACACATTGCTCCCAAATTTGGAAATAGACCACAGTACCTTACCTTTCATTCCCCATCTGGCCTTTACCTTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp ATTAATTTCTTAAAAAGTACACTTCTCATACTATGTGTTTGGCATTaGCTCTGGTTAACTCTTGTGCAGCAACACCTACGAGATGCTATC +
Preference number: 1 (lower is better)
Translates to: INFLKSTLLILCVWH*LWLTLVQQHLRDAI
Trigger: GATAGCATCTCGTAGGTGTTGCTGCACAAGAGTTAACCAGAGTCAATGCCAAACACATAGTATGAGAAGTGTACTTTTTAAGAAATTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 90 bp AAAATGGGACTTGTCATTTGTGTGAGGTTGAAATCTACTATACTTTaGATATGGCAACTGTTTTCAACCACTGAAGCAAAGAAGGTAAAG +
Preference number: 1 (lower is better)
Translates to: KMGLVICVRLKSTIL*IWQLFSTTEAKKVK
Trigger: CTTTACCTTCTTTGCTTCAGTGGTTGAAAACAGTTGCCATATTCAAAGTATAGTAGATTTCAACCTCACACAAATGACAAGTCCCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCAGCGGACAGGGTGCTaGTCACGCTCTGTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHQRTGC*SRSVAL
Trigger: CAGGGCCACAGAGCGTGAGCAGCACCCTGTCCGCTG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGGACAGCGGACAGGGTaGTGCTCACGCTCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHGQRTG*CSRSVA
Trigger: GGCCACAGAGCGTGAGCAGCACCCTGTCCGCTGTCC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCAGCGGACAGGGTGCTaGTCACGCTCTGTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHQRTGC*SRSVAL
Trigger: CAGGGCCACAGAGCGTGAGCAGCACCCTGTCCGCTG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGACAGCGGACAGGGTaGTGCTCACGCTCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGQRTG*CSRSVA
Trigger: GGCCACAGAGCGTGAGCAGCACCCTGTCCGCTGTCC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGTGCTCATGCGCTCTaGCCGGCAGGAGCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHSAHAL*PAGASG
Trigger: CCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCCCAGAGGCAGAACCTaGAGAGCGCCACGTGGTAGC +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQPRGRT*RAPRGS
Trigger: GCTACCACGTGGCGCTCTTCAGGTTCTGCCTCTGGG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTTCCTGCCCTCACCCTaGCCCACCAAGGGACTGGTG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHFLPSP*PTKGLV
Trigger: CACCAGTCCCTTGGTGGGGCAGGGTGAGGGCAGGAA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGATGGCGCCTCAGCCCTaGTCTGCCTGCTGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQMAPQP*SACCAL
Trigger: GAGAGCACAGCAGGCAGAGCAGGGCTGAGGCGCCAT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGAAGGTCAGTGCTCATaGGCTCTGGCCGGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHEGQCS*ALAGRS
Trigger: GCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGCTCAGGCAACTGTTTaGTCATGCCAACCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHAQATV*SCQPLP
Trigger: GGGGAGGGGTTGGCATGACCAAACAGTTGCCTGAGC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGGAGAGCTGCTGGCTaGTCCTCCCTTGCATGGTGG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHRRAAG*SSLAWW
Trigger: CCACCATGCAAGGGAGGAGCAGCCAGCAGCTCTCCT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGTAGGTGGCAGCCCCTaGAATCTGGGGTCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHVGGSP*NLGSSL
Trigger: CAGGCTAGACCCCAGATTGCAGGGGCTGCCACCTAC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGCCCACGAGACCCAGTaGGAGGTAGTGAAGTGGTTG +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQAHETQ*EVVKWL
Trigger: CAACCACTTCACTACCTCTCACTGGGTCTCGTGGGC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATACCACTGGAGTGACGTaGTGCAAGCCCTCTTCGGTC +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHTTGVT*CKPSSV
Trigger: GACCGAAGAGGGCTTGCATCACGTCACTCCAGTGGT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGTGGCTGCTCCTCCCTTaGATGGTGGTGATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQWLLLP*MVVMAS
Trigger: TGAGGCCATCACCACCATGCAAGGGAGGAGCAGCCA...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGCTCAGGCAACTGTTTaGTCATGCCAACCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQAQATV*SCQPLP
Trigger: GGGGAGGGGTTGGCATGACCAAACAGTTGCCTGAGC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCCACCAAGGGACTGGTaGCTTCCCTTCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVPPRDW*LPFCPG
Trigger: GCCAGGGCAGAAGGGAAGCCACCAGTCCCTTGGTGG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGCCGGCAGGAGCCAGTaGGCCACCCAGGAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKAGRSQ*ATQESC
Trigger: GCAGCTCTCCTGGGTGGCCCACTGGCTCCTGCCGGC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCACCCTCGTTCATTTTaGCACTCAAGTGTCCGGCAA +
Preference number: 2 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHHPRSF*HSSVRQ
Trigger: TTGCCGGACACTTGAGTGGCAAAATGAACGAGGGTG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTGCCCCACCAAGGGACTaGTGGCTTCCCTTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: PLPKEARGGQGITISGIGAPPRD*WLPFCP
Trigger: AGGGCAGAAGGGAAGCCACCAGTCCCTTGGTGGGGC...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCCTGGTGAAAGAGTATaGGGAGTGAGTCCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHPGERV*GVSPKA
Trigger: GGCCTTGGGACTCACTCCCCATACTCTTTCACCAGG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCCTGGTGAAAGAGTATaGGGAGTGAGTCCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQPGERV*GVSPKA
Trigger: GGCCTTGGGACTCACTCCCCATACTCTTTCACCAGG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGGGGATCACTATCAGTaGGATAGGTGCTGGCGGAAC +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQGDHYQ*DRCWRN
Trigger: GTTCCGCCAGCACCTATCCCACTGATAGTGATCCCC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCTCTTCGGTCACTCTTaGCTTCCACCAGGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHLFGHS*LPPGVS
Trigger: AGAGACCCCTGGTGGAAGCCAAGAGTGACCGAAGAG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCACGCTCTGTGGCCCTaGGGCCAAGGTCGCATGTTT +
Preference number: 2 (lower is better)
Translates to: PLPKEARGGQGITISGIGHALWP*GQGRMF
Trigger: AAACATGCGACCTTGGCCTCAGGGCCACAGAGCGTG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGTTCTACCAAAGGAGTaGGGTTCCTGGGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHVLPKE*GSWGNR
Trigger: CCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAAC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAATGGCGCCTCAGCCCTaGTCTGCCTGCTGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAMAPQP*SACCAL
Trigger: GAGAGCACAGCAGGCAGAGCAGGGCTGAGGCGCCAT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGTCTGTTCTGTTCATaGCCCAGCAGCCTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGLFCS*PSSLLP
Trigger: AGGCAAAAGGCTGCTGGGGCATGAACAGAACAGACC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGTTTTCGCTCTTGTTaGCCAGGGTGGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHSFRSC*PGWSAV
Trigger: CACTGCACTCCACCCTGGGCAACAAGAGCGAAAACT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGCCCCACCAAGGGACTaGTGGCTTCCCTTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAAPPRD*WLPFCP
Trigger: AGGGCAGAAGGGAAGCCACCAGTCCCTTGGTGGGGC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGTGGGAGCTGGAGTGTaGCCTCTGCCATGTTCACAC +
Preference number: 2 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVVGAGV*PLPCSH
Trigger: GTGTGAACATGGCAGAGGCCACACTCCAGCTCCCAC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGTATGTGGGTGGGAGCTaGAGTGTGGCCTCTGCCATG +
Preference number: 2 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVYVGGS*SVASAM
Trigger: CATGGCAGAGGCCACACTCCAGCTCCCACCCACATA...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGGCTGCATCTGGGTCTaGAGGAGGCGATGGGTGTTC +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAGCIWV*RRRWVF
Trigger: GAACACCCATCGCCTCCTTCAGACCCAGATGCAGCC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATGGGAGCAAGGACCCTaGACAGAAGCCAACGGCTGG +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAWEQGP*TEANGW
Trigger: CCAGCCGTTGGCTTCTGTTCAGGGTCCTTGCTCCCA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGTACAGAGAACCAATaGGATGTAGGCAGCACCATC +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGTENQ*DVGSTI
Trigger: GATGGTGCTGCCTACATCTCATTGGTTCTCTGTACC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGGCCAGATGGGGAATaGAAGGTAAGGTACTGTGGT +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHRPDGE*KVRYCG
Trigger: ACCACAGTACCTTACCTTTCATTCCCCATCTGGCCT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCACCCTCGTTCATTTTaGCACTCAAGTGTCCGGCAA +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHHPRSF*HSSVRQ
Trigger: TTGCCGGACACTTGAGTGGCAAAATGAACGAGGGTG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGAAGGTCAGTGCTCATaGGCTCTGGCCGGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKEGQCS*ALAGRS
Trigger: GCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGACTAAACAGAACCGTTaGTGTCCCAAGCCCACGAGA +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQTKQNR*CPKPTR
Trigger: TCTCGTGGGCTTGGGACAGCAACGGTTCTGTTTAGT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCCACGACCCAGAGGGTaGCAGCCTTTCTCACCCCCA +
Preference number: 2 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKPRPRG*QPFSPP
Trigger: TGGGGGTGAGAAAGGCTGCCACCCTCTGGGTCGTGG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTATGTGGGTGGGAGCTaGAGTGTGGCCTCTGCCATG +
Preference number: 2 (lower is better)
Translates to: PLPKEARGGQGITISGIGYVGGS*SVASAM
Trigger: CATGGCAGAGGCCACACTCCAGCTCCCACCCACATA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 90 bp GCCTGCTGTGCTCTCCAGCCCCCAAGGTGGTCCTCACCATTGGCTTaGGTCACTTGTGCCCGCTTCACACTAGGACTAGTGAACACTCTG +
Preference number: 2 (lower is better)
Translates to: ACCALQPPRWSSPLA*VTCARFTLGLVNTL
Trigger: CAGAGTGTTCACTAGTCCTAGTGTGAAGCGGGCACAAGTGACCAAAGCCAATGGTGAGGACCACCTTGGGGGCTGGAGAGCACAGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCCCCTCCCCATACCCTaGGTCACAGGTCTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKPLPIP*VTGLGH
Trigger: GTGACCAAGACCTGTGACTCAGGGTATGGGGAGGGG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGGCTGCATCTGGGTCTaGAGGAGGCGATGGGTGTTC +
Preference number: 2 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKGCIWV*RRRWVF
Trigger: GAACACCCATCGCCTCCTTCAGACCCAGATGCAGCC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACAAACCAGTGGCCATTaGCTAAGGAGGCTCGGGGAG +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAQTSGH*LRRLGE
Trigger: CTCCCCGAGCCTCCTTAGGCAATGGCCACTGGTTTG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGAGGGAGACCAGCCCTaGTTGCCACTTACATGGCTG +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAEGDQP*LPLTWL
Trigger: CAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCCCTC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCAGGAAAACTTAGTTTaGCCAGCCTTGTCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHQENLV*PALSAE
Trigger: CTCAGCTGACAAGGCTGGGCAAACTAAGTTTTCCTG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCTACTAGGAGCCACGTaGGAACCATGCTGCCAGACA +
Preference number: 2 (lower is better)
Translates to: PLPKEARGGQGITISGIGLLGAT*EPCCQT
Trigger: TGTCTGGCAGCATGGTTCCCACGTGGCTCCTAGTAG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGACCACAACAGTTACCTaGCTGTCACCCTCGTTCATT +
Preference number: 2 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQTTTVT*LSPSFI
Trigger: AATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATATCATGACTCAGTCCTaGTACCACGTCAAGATCCCT +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHIMTQS*YHVKIP
Trigger: AGGGATCTTGACGTGGTACCAGGACTGAGTCATGAT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATACCAGTTTCAGTACCTaGGCCCTCAAAGCAATAGTG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHTSFST*ALKAIV
Trigger: CACTATTGCTTTGAGGGCCCAGGTACTGAAACTGGT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 90 bp TGCTCTCCAGCCCCCAAGGTGGTCCTCACCATTGGCTTTGGTCACTaGTGCCCGCTTCACACTAGGACTAGTGAACACTCTGCTCGTTCC +
Preference number: 2 (lower is better)
Translates to: CSPAPKVVLTIGFGH*CPLHTRTSEHSARS
Trigger: GGAACGAGCAGAGTGTTCACTAGTCCTAGTGTGAAGCGGGCACAAGTGACCAAAGCCAATGGTGAGGACCACCTTGGGGGCTGGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAAAGAGTATGGGGAGTaGGTCCCAAGGCCCGCTCAC +
Preference number: 2 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKKEYGE*VPRPAH
Trigger: GTGAGCGGGCCTTGGGACTCACTCCCCATACTCTTT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAGGGAACCACTGGAGTaGCGTGATGCAAGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAREPLE*RDASPL
Trigger: AAGAGGGCTTGCATCACGTCACTCCAGTGGTTCCCT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACCTCTGCCCAAATCATaGCTCAGTCCTGGTACCACG +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAPLPKS*LSPGTT
Trigger: CGTGGTACCAGGACTGAGTCATGATTTGGGCAGAGG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTGGCTGCTCCTCCCTTaGATGGTGGTGATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKWLLLP*MVVMAS
Trigger: TGAGGCCATCACCACCATGCAAGGGAGGAGCAGCCA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAATGTTCACACGGGTCTaGAGACCTTCCCCACGAGGA +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAMFTRV*RPSPRG
Trigger: TCCTCGTGGGGAAGGTCTGCAGACCCGTGTGAACAT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCTGGAGTGTGGCCTCTaGCATGTTCACACGGGTCTG +
Preference number: 2 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKLECGL*HVHTGL
Trigger: CAGACCCGTGTGAACATGGCAGAGGCCACACTCCAG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTTCACATTTAAAGGCTaGCAAGGTATTGCTGGCGAC +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHFTFKG*QGIAGD
Trigger: GTCGCCAGCAATACCTTGGCAGCCTTTAAATGTGAA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCAGTCCCTACAGTTCTaGTACCAAAGTGGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHQSLQF*YQSGLQ
Trigger: TTGAAGACCACTTTGGTAGCAGAACTGTAGGGACTG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCCCAGAGGCAGAACCTaGAGAGCGCCACGTGGTAGC +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAPRGRT*RAPRGS
Trigger: GCTACCACGTGGCGCTCTTCAGGTTCTGCCTCTGGG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCAATTAACCAGCCAGTaGGAAAACGAATCAGCATCT +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHQLTSQ*ENESAS
Trigger: AGATGCTGATTCGTTTTCTCACTGGCTGGTTAATTG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGACTGGAGAAAAAGCTaGCACAAAACTCAAGACAAC +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHDWRKS*HKTQDN
Trigger: GTTGTCTTGAGTTTTGTGTCAGCTTTTTCTCCAGTC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGGCTTTGGTCACTTGTaGCCGCTTCACACTAGGACT +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAGFGHL*PLHTRT
Trigger: AGTCCTAGTGTGAAGCGGGCACAAGTGACCAAAGCC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCCTCCTCCTTTCCACTaGTTTAACCAAACCTTAATG +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHPPPFH*FNQTLM
Trigger: CATTAAGGTTTGGTTAAAGCAGTGGAAAGGAGGAGG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCTCACCCCCACTGGCTaGTCCAGGGCCTCCCCTAGG +
Preference number: 2 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGLTPTG*SRASPR
Trigger: CCTAGGGGAGGCCCTGGACCAGCCAGTGGGGGTGAG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAAAGGTTTATGTGGGTaGGAGCTGGAGTGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAKGLCG*ELECGL
Trigger: GAGGCCACACTCCAGCTCCCACCCACATAAACCTTT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 90 bp TGCCCTCGGCCTCCAACTGCAGCCGCCCTGGCGCGTGAAATGAAATaGGTGGGCCTTCCTAGGATTGTAAAATGGGACTTGTCATTTGTG +
Preference number: 2 (lower is better)
Translates to: CPRPPTAAALAREMK*VGLPRIVKWDLSFV
Trigger: CACAAATGACAAGTCCCATTTTACAATCCTAGGAAGGCCCACCAATTTCATTTCACGCGCCAGGGCGGCTGCAGTTGGAGGCCGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCCCCTCCCCATACCCTaGGTCACAGGTCTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAPLPIP*VTGLGH
Trigger: GTGACCAAGACCTGTGACTCAGGGTATGGGGAGGGG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCAGTGCTCATGCGCTCTaGCCGGCAGGAGCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGSAHAL*PAGASG
Trigger: CCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACT...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 90 bp CCAGCGCAAGTAACAGACGTTTCACATTTAAAGGCTGCCAAGGTATaGCTGGCGACTCTCCTGTCTGTGAACATGCGCAACGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: PAQVTDVSHLKAAKV*LATLLSVNMRNGHR
Trigger: CCTGTGCCCGTTGCGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGTGAAACGTCTGTTACTTGCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGCGCCCGGCCTCAACTaGAAATTCTTGATGAGATTA +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAAPGLN*KFLMRL
Trigger: TAATCTCATCAAGAATTTTCAGTTGAGGCCGGGCGC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAACTGTTGGAGTAAATaGGTTATGGAAAAGCCACAA +
Preference number: 2 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHNCWSK*VMEKPQ
Trigger: TTGTGGCTTTTCCATAACTCATTTACTCCAACAGTT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCTCACCCCCACTGGCTaGTCCAGGGCCTCCCCTAGG +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQLTPTG*SRASPR
Trigger: CCTAGGGGAGGCCCTGGACCAGCCAGTGGGGGTGAG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACTTTCTCACCCCCACTaGCTGGTCCAGGGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGLSHPH*LVQGLP
Trigger: GGGGAGGCCCTGGACCAGCCAGTGGGGGTGAGAAAG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCCCAACAAGCAGTGCTaGGCCTGGGCGGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGPNKQC*AWAVGH
Trigger: ATGCCCCACCGCCCAGGCCCAGCACTGCTTGTTGGG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGCCACGTGGGAACCATaGTGCCAGACACCAGAAACT +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAATWEP*CQTPET
Trigger: AGTTTCTGGTGTCTGGCAGCATGGTTCCCACGTGGC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCCCTTCTGCCCTGGCTaGCAGTCCTCAGAAAACCAA +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAPFCPG*QSSENQ
Trigger: TTGGTTTTCTGAGGACTGGCAGCCAGGGCAGAAGGG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGATGTTCACACGGGTCTaGAGACCTTCCCCACGAGGA +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAMFTRV*RPSPRG
Trigger: TCCTCGTGGGGAAGGTCTGCAGACCCGTGTGAACAT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGCTTCCCTTCTGCCCTaGCTGCCAGTCCTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAASLLP*LPVLRK
Trigger: TTTTCTGAGGACTGGCAGCCAGGGCAGAAGGGAAGC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACCACCAAGGGACTGGTaGCTTCCCTTCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGPPRDW*LPFCPG
Trigger: GCCAGGGCAGAAGGGAAGCCACCAGTCCCTTGGTGG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCTTTCTCACCCCCACTaGCTGGTCCAGGGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQLSHPH*LVQGLP
Trigger: GGGGAGGCCCTGGACCAGCCAGTGGGGGTGAGAAAG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGTGGTGATGGCCTCATaGCGCCTCAGCCCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGVVMAS*RLSPAL
Trigger: CAGAGCAGGGCTGAGGCGCCATGAGGCCATCACCAC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGGGGATCACTATCAGTaGGATAGGTGCTGGCGGAAC +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAGDHYQ*DRCWRN
Trigger: GTTCCGCCAGCACCTATCCCACTGATAGTGATCCCC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTAAGCAGTGCTGGGCCTaGGCGGTGGGGCATGTTCAG +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGKQCWA*AVGHVQ
Trigger: CTGAACATGCCCCACCGCCCAGGCCCAGCACTGCTT...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 90 bp TTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTaGCCACTCAAGTGTCCGGCAATGCTGAATACAGCCAGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: FHQTTTVTWLSPSFI*PLKCPAMLNTASVL
Trigger: GAGCACACTGGCTGTATTCAGCATTGCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 90 bp CATCTTTACTTAATGAAGAACCACCTTGAGGGAGACCAGCCCTGCTaGCCACTTACATGGCTGCCCCTGAGACGGTCTGTTCTGTTCATG +
Preference number: 2 (lower is better)
Translates to: HLYLMKNHLEGDQPC*PLTWLPLRRSVLFM
Trigger: CATGAACAGAACAGACCGTCTCAGGGGCAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCCCTCAAGGTGGTTCTTCATTAAGTAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCACGCTCTGTGGCCCTaGGGCCAAGGTCGCATGTTT +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGHALWP*GQGRMF
Trigger: AAACATGCGACCTTGGCCTCAGGGCCACAGAGCGTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCCCTTCTGCCCTGGCTaGCAGTCCTCAGAAAACCAA +
Preference number: 2 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATPFCPG*QSSENQ
Trigger: TTGGTTTTCTGAGGACTGGCAGCCAGGGCAGAAGGG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGTGGTGATGGCCTCATaGCGCCTCAGCCCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQVVMAS*RLSPAL
Trigger: CAGAGCAGGGCTGAGGCGCCATGAGGCCATCACCAC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAACCCAGGAGAGCTGCTaGCTGCTCCTCCCTTGCATG +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGTQESC*LLLPCM
Trigger: CATGCAAGGGAGGAGCAGCCAGCAGCTCTCCTGGGT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGACAGAAGCCAACGGCTaGAGCCAACGGGCCATGCCC +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQTEANG*SQRAMP
Trigger: GGGCATGGCCCGTTGGCTCCAGCCGTTGGCTTCTGT...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATGTGAATTTCTGTGTTaGTGTGACAGGAATGCCACA +
Preference number: 2 (lower is better)
Translates to: LSSPKGLAHLLINPLAEACEFLC*CDRNAT
Trigger: TGTGGCATTCCTGTCACACCAACACAGAAATTCACA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTCCCTTGCATGGTGGTaGTGGCCTCATGGCGCCTCA +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQSLAWW*WPHGAS
Trigger: TGAGGCGCCATGAGGCCATCACCACCATGCAAGGGA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGCCCACGAGACCCAGTaGGAGGTAGTGAAGTGGTTG +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGAHETQ*EVVKWL
Trigger: CAACCACTTCACTACCTCTCACTGGGTCTCGTGGGC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGCCACGTGGGAACCATaGTGCCAGACACCAGAAACT +
Preference number: 2 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGATWEP*CQTPET
Trigger: AGTTTCTGGTGTCTGGCAGCATGGTTCCCACGTGGC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTTATCAGTGGGATAGGTaGTGGCGGAACCAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGYQWDR*WRNQGV
Trigger: CACCCCCTGGTTCCGCCAGCACCTATCCCACTGATA...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACTCCAGCCCCCAAGGTaGTCCTCACCATTGGCTTTG +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGLQPPR*SSPLAL
Trigger: CAAAGCCAATGGTGAGGACCACCTTGGGGGCTGGAG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGAAATCCGTGCTATTTaGGTTCTCATCGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGEIRAI*VLIGWA
Trigger: GGCCCAGCCGATGAGAACTCAAATAGCACGGATTTC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCAATGAAGAACCACCTTaGGGGAGACCAGCCCTGCTT +
Preference number: 2 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGNEEPP*GRPALL
Trigger: AAGCAGGGCTGGTCTCCCTCAAGGTGGTTCTTCATT...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCAAGGCCAAGTGTGGCTaGAATTCAGGATCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGKAKCG*NSGSAP
Trigger: TGGGGCAGATCCTGAATTGCAGCCACACTTGGCCTT...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGACCACAACAGTTACCTaGCTGTCACCCTCGTTCATT +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHATTTVT*LSPSFI
Trigger: AATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCTCTTCGGTCACTCTTaGCTTCCACCAGGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGLFGHS*LPPGVS
Trigger: AGAGACCCCTGGTGGAAGCCAAGAGTGACCGAAGAG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACAAGGAGGGAACCACTaGAGTGACGTGATGCAAGCC +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGQGGNH*SDVMQA
Trigger: GGCTTGCATCACGTCACTCCAGTGGTTCCCTCCTTG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCTTAAAACGAGGACTTaGACAAGGAGGGAACCACTG +
Preference number: 2 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHALKTRT*TRREPL
Trigger: CAGTGGTTCCCTCCTTGTCCAAGTCCTCGTTTTAAG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGAGTGTCCGGCAATGCTaGATACAGCCAGTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQSVRQC*IQPVCS
Trigger: GGAGCACACTGGCTGTATTCAGCATTGCCGGACACT...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTACCACCTGCACCAGCTaGCTAAACAGAACCGTTGCT +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGTTCTS*LNRTVA
Trigger: AGCAACGGTTCTGTTTAGTCAGCTGGTGCAGGTGGT...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGAAATCCGTGCTATTTaGGTTCTCATCGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGEIRAI*VLIGWA
Trigger: GGCCCAGCCGATGAGAACTCAAATAGCACGGATTTC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCCCTGGCGCGTGAAATaGAATTGGTGGGCCTTCCTA +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQPWRVK*NWWAFL
Trigger: TAGGAAGGCCCACCAATTTCATTTCACGCGCCAGGG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCTACTAGGAGCCACGTaGGAACCATGCTGCCAGACA +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQLLGAT*EPCCQT
Trigger: TGTCTGGCAGCATGGTTCCCACGTGGCTCCTAGTAG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAAAAGGTTTATGTGGGTaGGAGCTGGAGTGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGKGLCG*ELECGL
Trigger: GAGGCCACACTCCAGCTCCCACCCACATAAACCTTT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCTACTTAGGACCACTTaGGGGCACAACTTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGLLRTT*GHNFSF
Trigger: GAAGCTGAAGTTGTGCCCTCAAGTGGTCCTAAGTAG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACTGCAATTCAGGATCTaGCCCAAACTCATCAGCCCT +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGLQFRI*PKLISP
Trigger: AGGGCTGATGAGTTTGGGGCAGATCCTGAATTGCAG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAACCCTTGAGGGTGTGTaGCAGCAAATACCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGTLEGV*QQIPQV
Trigger: CACTTGAGGTATTTGCTGGCACACACCCTCAAGGGT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATTGCAAAGGTTTATGTaGGTGGGAGCTGGAGTGTGG +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGLQRFM*VGAGVW
Trigger: CCACACTCCAGCTCCCACCCACATAAACCTTTGCAA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCTAGAAGGCCAAGTGTaGCTGCAATTCAGGATCTGC +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGLEGQV*LQFRIC
Trigger: GCAGATCCTGAATTGCAGCCACACTTGGCCTTCTAG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTTCACATTTAAAGGCTaGCAAGGTATTGCTGGCGAC +
Preference number: 2 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGFTFKG*QGIAGD
Trigger: GTCGCCAGCAATACCTTGGCAGCCTTTAAATGTGAA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCTGCAATTCAGGATCTaGCCCAAACTCATCAGCCCT +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQLQFRI*PKLISP
Trigger: AGGGCTGATGAGTTTGGGGCAGATCCTGAATTGCAG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGCAGCAGTCAGCACATaGAAGACATTCAGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQAAVST*KTFSEQ
Trigger: CTGCTCACTGAATGTCTTGCATGTGCTGACTGCTGC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTTCCCCCAAAGGCCTTaGACACCTTCTGATAAACCC +
Preference number: 2 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQFPQRP*TPSDKP
Trigger: GGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTATCATGACTCAGTCCTaGTACCACGTCAAGATCCCT +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGIMTQS*YHVKIP
Trigger: AGGGATCTTGACGTGGTACCAGGACTGAGTCATGAT...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACATCCAGGAAATCCGTaGTATTTGAGTTCTCATCGG +
Preference number: 2 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGHPGNP*YLSSHR
Trigger: CCGATGAGAACTCAAATAGCACGGATTTCCTGGATG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTACGTCAAGATCCCTTTaGAAGGAAACATACTTTGCA +
Preference number: 2 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGTSRSL*KETYFA
Trigger: TGCAAAGTATGTTTCCTTTCAAAGGGATCTTGACGT...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp CACGGGTCTGCAGACCTTCCCCACGAGGAAGGTCAGTaGTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: HGSADLPHEEGQ*SCALAGRSQWA
Trigger: GGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGGGGAAGGTCTGCAGACCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp TCACACACGCGCCAGCTGCACTCCTGCACCAGCCGCTaGAACGACTGCACCTCACGTGGTGGCGGGGACTCA +
Preference number: 3 (lower is better)
Translates to: SHTRQLHSCTSR*NDCTSRGGGDS
Trigger: TGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp GACAGCGGACAGGGTGCTGCTCACGCTCTGTGGCCCTaGGGCCAAGGTCGCATGTTTCCCACGACCCAGAGG +
Preference number: 3 (lower is better)
Translates to: DSGQGAAHALWP*GQGRMFPTTQR
Trigger: CCTCTGGGTCGTGGGAAACATGCGACCTTGGCCTCAGGGCCACAGAGCGTGAGCAGCACCCTGTCCGCTGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp AGGAGAGCTGCTGGCTGCTCCTCCCTTGCATGGTGGTaGTGGCCTCATGGCGCCTCAGCCCTGCTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: RRAAGCSSLAWW*WPHGASALLCL
Trigger: CAGGCAGAGCAGGGCTGAGGCGCCATGAGGCCATCACCACCATGCAAGGGAGGAGCAGCCAGCAGCTCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp GAGGCCAAGGTCGCATGTTTCCCACGACCCAGAGGGTaGCAGCCTTTCTCACCCCCACTGGCTGGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: EAKVACFPRPRG*QPFSPPLAGPG
Trigger: CCCTGGACCAGCCAGTGGGGGTGAGAAAGGCTGCCACCCTCTGGGTCGTGGGAAACATGCGACCTTGGCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp CTCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTaGTGGCGGGGACTCACATTCACAAGACGGGACGGG +
Preference number: 3 (lower is better)
Translates to: LLHQPLQRLHLT*WRGLTFTRRDG
Trigger: CCCGTCCCGTCTTGTGAATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp CGCCAGCTGCACTCCTGCACCAGCCGCTGCAACGACTaGACCTCACGTGGTGGCGGGGACTCACATTCACAA +
Preference number: 3 (lower is better)
Translates to: RQLHSCTSRCND*TSRGGGDSHSQ
Trigger: TTGTGAATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCTGGCTGCTCCTCCCTaGCATGGTGGTGATGGCCTC +
Preference number: 3 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVLAAPP*HGGDGL
Trigger: GAGGCCATCACCACCATGCAAGGGAGGAGCAGCCAG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGGTGGTCCTCACCATaGGCTTTGGTCACTTGTGCC +
Preference number: 3 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHRWSSP*ALVTCA
Trigger: GGCACAAGTGACCAAAGCCAATGGTGAGGACCACCT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp GGCAGCCTGTGGTCCCACCTTGTAGGTGGCAGCCCCTaGAATCTGGGGTCTAGCCTGTCGGCGTTTGCTTTA +
Preference number: 3 (lower is better)
Translates to: GSLWSHLVGGSP*NLGSSLSAFAL
Trigger: TAAAGCAAACGCCGACAGGCTAGACCCCAGATTGCAGGGGCTGCCACCTACAAGGTGGGACCACAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp TACGAGATGCTATCACACACGCGCCAGCTGCACTCCTaGACCAGCCGCTGCAACGACTGCACCTCACGTGGT +
Preference number: 3 (lower is better)
Translates to: YEMLSHTRQLHS*TSRCNDCTSRG
Trigger: ACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTGATAGCATCTCGTA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp GCAACACCTACGAGATGCTATCACACACGCGCCAGCTaGACTCCTGCACCAGCCGCTGCAACGACTGCACCT +
Preference number: 3 (lower is better)
Translates to: ATPTRCYHTRAS*TPAPAAATTAP
Trigger: AGGTGCAGTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTGATAGCATCTCGTAGGTGTTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGAGCTCAGGCAACTGTTaGGTCATGCCAACCCCTCCC +
Preference number: 3 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVSSGNC*VMPTPP
Trigger: GGGAGGGGTTGGCATGACCAAACAGTTGCCTGAGCT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp CTGTGCAGACAAAGATGTGACAGCAGCACTAGATGCTaGCCCAACAAGCAGTGCTGGGCCTGGGCGGTGGGG +
Preference number: 3 (lower is better)
Translates to: LCRQRCDSSTRC*PNKQCWAWAVG
Trigger: CCCCACCGCCCAGGCCCAGCACTGCTTGTTGGGTCAGCATCTAGTGCTGCTGTCACATCTTTGTCTGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp GGGAGGCCAGGGGATCACTATCAGTGGGATAGGTGCTaGCGGAACCAGGGGGTGTCTCCTTCCCAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: GRPGDHYQWDRC*RNQGVSPSQFQ
Trigger: TTGAAACTGGGAAGGAGACACCCCCTGGTTCCGCCAGCACCTATCCCACTGATAGTGATCCCCTGGCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp CACCTTGAGGGAGACCAGCCCTGCTTGCCACTTACATaGCTGCCCCTGAGACGGTCTGTTCTGTTCATGCCC +
Preference number: 3 (lower is better)
Translates to: HLEGDQPCLPLT*LPLRRSVLFMP
Trigger: GGGCATGAACAGAACAGACCGTCTCAGGGGCAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCCCTCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTAGCTCAGGCAACTGTTaGGTCATGCCAACCCCTCCC +
Preference number: 3 (lower is better)
Translates to: PLPKEARGGQGITISGIGSSGNC*VMPTPP
Trigger: GGGAGGGGTTGGCATGACCAAACAGTTGCCTGAGCT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGAGGTAGTGAAGTGGTaGCAAAGGTTTATGTGGGTG +
Preference number: 3 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQEVVKW*QRFMWV
Trigger: CACCCACATAAACCTTTGCAACCACTTCACTACCTC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp ACACTCTGCTCGTTCCTGGTGAAAGAGTATGGGGAGTaGGTCCCAAGGCCCGCTCACAGGCACTTCTCTCCC +
Preference number: 3 (lower is better)
Translates to: TLCSFLVKEYGE*VPRPAHRHFSP
Trigger: GGGAGAGAAGTGCCTGTGAGCGGGCCTTGGGACTCACTCCCCATACTCTTTCACCAGGAACGAGCAGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp GAGTTCTCATCGGCTGGGCCAACCACCTGCACCAGCTaGCTAAACAGAACCGTTGCTGTCCCAAGCCCACGA +
Preference number: 3 (lower is better)
Translates to: EFSSAGPTTCTS*LNRTVAVPSPR
Trigger: TCGTGGGCTTGGGACAGCAACGGTTCTGTTTAGTCAGCTGGTGCAGGTGGTTGGCCCAGCCGATGAGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTCACCCTCGTTCATTTaGCCACTCAAGTGTCCGGCA +
Preference number: 3 (lower is better)
Translates to: PLPKEARGGQGITISGIGSPSFI*PLKCPA
Trigger: TGCCGGACACTTGAGTGGCAAAATGAACGAGGGTGA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTGGAAATCCGTGCTATTaGAGTTCTCATCGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: PLPKEARGGQGITISGIGGNPCY*SSHRLG
Trigger: GCCCAGCCGATGAGAACTCAAATAGCACGGATTTCC...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp GAGGACTTGGACAAGGAGGGAACCACTGGAGTGACGTaGTGCAAGCCCTCTTCGGTCACTCTTGGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: EDLDKEGTTGVT*CKPSSVTLGFH
Trigger: GTGGAAGCCAAGAGTGACCGAAGAGGGCTTGCATCACGTCACTCCAGTGGTTCCCTCCTTGTCCAAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp TCCAGGGCTCGCTGTAAACAGCCTCCACTCTTGGGCTaGATAAGCACTCCCAAGAAGCTGGGCCCCTACCAA +
Preference number: 3 (lower is better)
Translates to: SRARCKQPPLLG*ISTPKKLGPYQ
Trigger: TTGGTAGGGGCCCAGCTTCTTGGGAGTGCTTATTCAGCCCAAGAGTGGAGGCTGTTTACAGCGAGCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp TTCAAGGCTGCAAGAAACTCTCTGTCTACAAACCAGTaGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: FKAARNSLSTNQ*PLPKEARGGQG
Trigger: CCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGTTTGTAGACAGAGAGTTTCTTGCAGCCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTCTAAAGTGGGGCTTTaGAAAATCACCAGTCCACAA +
Preference number: 3 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHSKVGL*KITSPQ
Trigger: TTGTGGACTGGTGATTTTCAAAAGCCCCACTTTAGA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCTTTTCACTGCAACCTaGAAGGTGGCATTTATCTCA +
Preference number: 3 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHLFTAT*KVAFIS
Trigger: TGAGATAAATGCCACCTTCAAGGTTGCAGTGAAAAG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp GGCTCCAGGAAGCAAATAAAGGGCTGCATCTGGGTCTaGAGGAGGCGATGGGTGTTCTGCCCTCCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: GSRKQIKGCIWV*RRRWVFCPPVF
Trigger: GAAAACAGGAGGGCAGAACACCCATCGCCTCCTTCAGACCCAGATGCAGCCCTTTATTTGCTTCCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp AGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTaGACATGCGCAACGGGCACAGGTACAGAGAACCAA +
Preference number: 3 (lower is better)
Translates to: RLPRYCWRLSCL*TCATGTGTENQ
Trigger: TTGGTTCTCTGTACCTGTGCCCGTTGCGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp GAAGAGCGCCACGTGGTAGCTCATCCAGGAAATCCGTaGTATTTGAGTTCTCATCGGCTGGGCCAACCACCT +
Preference number: 3 (lower is better)
Translates to: EERHVVAHPGNP*YLSSHRLGQPP
Trigger: AGGTGGTTGGCCCAGCCGATGAGAACTCAAATAGCACGGATTTCCTGGATGAGCTACCACGTGGCGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp CTAGTGAACACTCTGCTCGTTCCTGGTGAAAGAGTATaGGGAGTGAGTCCCAAGGCCCGCTCACAGGCACTT +
Preference number: 3 (lower is better)
Translates to: LVNTLLVPGERV*GVSPKARSQAL
Trigger: AAGTGCCTGTGAGCGGGCCTTGGGACTCACTCCCCATACTCTTTCACCAGGAACGAGCAGAGTGTTCACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGATTGGCTTTGGTCACTaGTGCCCGCTTCACACTAGG +
Preference number: 3 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKIGFGH*CPLHTR
Trigger: CCTAGTGTGAAGCGGGCACAAGTGACCAAAGCCAAT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATTCCCAGTTTCAAACTaGTCCTCAGAAGGGGGACTC +
Preference number: 3 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAFPVSN*SSEGGL
Trigger: GAGTCCCCCTTCTGAGGACAAGTTTGAAACTGGGAA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp GCCTGTCGGCGTTTGCTTTATTGTGGGTGGAGCAGCTaGTGCAGAATCTGTGAGTTGACTCACCAGTCCCTA +
Preference number: 3 (lower is better)
Translates to: ACRRLLYCGWSS*CRICELTHQSL
Trigger: TAGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp ACTCTGGTTAACTCTTGTGCAGCAACACCTACGAGATaGTATCACACACGCGCCAGCTGCACTCCTGCACCA +
Preference number: 3 (lower is better)
Translates to: TLVNSCAATPTR*YHTRASCTPAP
Trigger: TGGTGCAGGAGTGCAGCTGGCGCGTGTGTGATAGCATCTCGTAGGTGTTGCTGCACAAGAGTTAACCAGAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp CCCTTAAAACGAGGACTTGGACAAGGAGGGAACCACTaGAGTGACGTGATGCAAGCCCTCTTCGGTCACTCT +
Preference number: 3 (lower is better)
Translates to: PLKRGLGQGGNH*SDVMQALFGHS
Trigger: AGAGTGACCGAAGAGGGCTTGCATCACGTCACTCCAGTGGTTCCCTCCTTGTCCAAGTCCTCGTTTTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGAAAGCTGACTTGTTaGCTTCAAAACACAAACCAA +
Preference number: 3 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHRKLTC*LQNTNQ
Trigger: TTGGTTTGTGTTTTGAAGCAAACAAGTCAGCTTTCT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp CCTCGTTCATTTTGCCACTCAAGTGTCCGGCAATGCTaGATACAGCCAGTGTGCTCCTCCCATCAGGCTTTG +
Preference number: 3 (lower is better)
Translates to: PRSFCHSSVRQC*IQPVCSSHQAL
Trigger: CAAAGCCTGATGGGAGGAGCACACTGGCTGTATTCAGCATTGCCGGACACTTGAGTGGCAAAATGAACGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp ACAGAACCGTTGCTGTCCCAAGCCCACGAGACCCAGTaGGAGGTAGTGAAGTGGTTGCAAAGGTTTATGTGG +
Preference number: 3 (lower is better)
Translates to: TEPLLSQAHETQ*EVVKWLQRFMW
Trigger: CCACATAAACCTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAACGGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp CAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTaGGGCAATCCTACTGGCTGTGCAGACAAAGATGTG +
Preference number: 3 (lower is better)
Translates to: QRPCTPSDKPPG*GNPTGCADKDV
Trigger: CACATCTTTGTCTGCACAGCCAGTAGGATTGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp CTTCTAGAAGGCCAAGTGTGGCTGCAATTCAGGATCTaGCCCAAACTCATCAGCCCTTCCCAAGTTTCCCAG +
Preference number: 3 (lower is better)
Translates to: LLEGQVWLQFRI*PKLISPSQVSQ
Trigger: CTGGGAAACTTGGGAAGGGCTGATGAGTTTGGGGCAGATCCTGAATTGCAGCCACACTTGGCCTTCTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR GCA 72 bp TGTCGGCGTTTGCTTTATTGTGGGTGGAGCAGCTGCTaGAGAATCTGTGAGTTGACTCACCAGTCCCTACAG +
Preference number: 3 (lower is better)
Translates to: CRRLLYCGWSSC*RICELTHQSLQ
Trigger: CTGTAGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCTGGCTGCTCCTCCCTaGCATGGTGGTGATGGCCTC +
Preference number: 3 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGLAAPP*HGGDGL
Trigger: GAGGCCATCACCACCATGCAAGGGAGGAGCAGCCAG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCCTCTTCGGTCACTCTaGGCTTCCACCAGGGGTCTC +
Preference number: 3 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGPLRSL*ASTRGL
Trigger: GAGACCCCTGGTGGAAGCCAAGAGTGACCGAAGAGG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTCACCCTCGTTCATTTaGCCACTCAAGTGTCCGGCA +
Preference number: 3 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHASPSFI*PLKCPA
Trigger: TGCCGGACACTTGAGTGGCAAAATGAACGAGGGTGA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACCTCTTCGGTCACTCTaGGCTTCCACCAGGGGTCTC +
Preference number: 3 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGPLRSL*ASTRGL
Trigger: GAGACCCCTGGTGGAAGCCAAGAGTGACCGAAGAGG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp GCTTTATTGTGGGTGGAGCAGCTGCTGCAGAATCTGTaGGTTGACTCACCAGTCCCTACAGTTCTGCTACCA +
Preference number: 3 (lower is better)
Translates to: ALLWVEQLLQNL*VDSPVPTVLLP
Trigger: TGGTAGCAGAACTGTAGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCCACAATAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCAGTTTTCGCTCTTGTaGCCCAGGGTGGAGTGCAGT +
Preference number: 3 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGQFSLL*PRVECS
Trigger: ACTGCACTCCACCCTGGGCAACAAGAGCGAAAACTG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp GTCACGAAGCCATCTTTACTTAATGAAGAACCACCTTaGGGGAGACCAGCCCTGCTTGCCACTTACATGGCT +
Preference number: 3 (lower is better)
Translates to: VTKPSLLNEEPP*GRPALLATYMA
Trigger: AGCCATGTAAGTGGCAAGCAGGGCTGGTCTCCCTCAAGGTGGTTCTTCATTAAGTAAAGATGGCTTCGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp TGCCCTCCTGTTTTCCACCAAACCACAACAGTTACCTaGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGT +
Preference number: 3 (lower is better)
Translates to: CPPVFHQTTTVT*LSPSFILPLKC
Trigger: ACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAAACAGGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp CTTGGAGGCCTAAGTAGACAGCAATTAACCAGCCAGTaGGAAAACGAATCAGCATCTAGAACAGGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: LGGLSRQQLTSQ*ENESASRTGGE
Trigger: CTCCCCTCCTGTTCTAGATGCTGATTCGTTTTCTCACTGGCTGGTTAATTGCTGTCTACTTAGGCCTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp TTTTGCCTTAGGTTTCAGGACCTTCTGAACCACCCTTaGGGGTGTGTGCCAGCAAATACCTCAAGTGGACTT +
Preference number: 3 (lower is better)
Translates to: FCLRFQDLLNHP*GCVPANTSSGL
Trigger: AAGTCCACTTGAGGTATTTGCTGGCACACACCCTCAAGGGTGGTTCAGAAGGTCCTGAAACCTAAGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR-3UTR CAA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGAAGGCTGCCAAGGTATaGCTGGCGACTCTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQKAAKV*LATLLS
Trigger: AGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTT...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp ATCAGCCCTTCCCAAGTTTCCCAGGTGAGAACAGTATaGGCTGTGAATTTCTGTGTTGGTGTGACAGGAATG +
Preference number: 3 (lower is better)
Translates to: ISPSQVSQVRTV*AVNFCVGVTGM
Trigger: CATTCCTGTCACACCAACACAGAAATTCACAGCTCATACTGTTCTCACCTGGGAAACTTGGGAAGGGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp GGCTCAGGAAAACTTAGTTTGCCCAGCCTTGTCAGCTaGGATTGGTTTTGCTTTCCAGCCAGAAGTAGAAAC +
Preference number: 3 (lower is better)
Translates to: GSGKLSLPSLVS*DWFCFPARSRN
Trigger: GTTTCTACTTCTGGCTGGAAAGCAAAACCAATCTCAGCTGACAAGGCTGGGCAAACTAAGTTTTCCTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp GCTGACACAAAACTCAAGACAACCAGTTTCAGTACCTaGGCCCTCAAAGCAATAGTGAGGACTGAGAAAGTA +
Preference number: 3 (lower is better)
Translates to: ADTKLKTTSFST*ALKAIVRTEKV
Trigger: TACTTTCTCAGTCCTCACTATTGCTTTGAGGGCCCAGGTACTGAAACTGGTTGTCTTGAGTTTTGTGTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CCA 72 bp TTTTCAACCACTGAAGCAAAGAAGGTAAAGGCCAGATaGGGAATGAAAGGTAAGGTACTGTGGTCTATTTCC +
Preference number: 3 (lower is better)
Translates to: FSTTEAKKVKAR*GMKGKVLWSIS
Trigger: GGAAATAGACCACAGTACCTTACCTTTCATTCCCCATCTGGCCTTTACCTTCTTTGCTTCAGTGGTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp ATTCATCACATAGGATTATGCTTTTCACTGCAACCTTaGAGGTGGCATTTATCTCAATCTGTGACTCCAGCT +
Preference number: 3 (lower is better)
Translates to: IHHIGLCFSLQP*RWHLSQSVTPA
Trigger: AGCTGGAGTCACAGATTGAGATAAATGCCACCTTCAAGGTTGCAGTGAAAAGCATAATCCTATGTGATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp TACTATACTTTGAATATGGCAACTGTTTTCAACCACTaGAGCAAAGAAGGTAAAGGCCAGATGGGGAATGAA +
Preference number: 3 (lower is better)
Translates to: YYTLNMATVFNH*SKEGKGQMGNE
Trigger: TTCATTCCCCATCTGGCCTTTACCTTCTTTGCTTCAGTGGTTGAAAACAGTTGCCATATTCAAAGTATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR TCA 72 bp TTAAAAAGTACACTTCTCATACTATGTGTTTGGCATTaGCTCTGGTTAACTCTTGTGCAGCAACACCTACGA +
Preference number: 3 (lower is better)
Translates to: LKSTLLILCVWH*LWLTLVQQHLR
Trigger: TCGTAGGTGTTGCTGCACAAGAGTTAACCAGAGTCAATGCCAAACACATAGTATGAGAAGTGTACTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGGCAGACAATCCCGGTaGGGCAGCCTGTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHGRQSR*GSLWSH
Trigger: GTGGGACCACAGGCTGCCTCACCGGGATTGTCTGCC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCCACAACCCGGATCCTaGTACCGCGGCGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHPQPGS*YRGAAI
Trigger: GATGGCGGCGCCGCGGTAGCAGGATCCGGGTTGTGG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGGTCAGCCAAGCGCTaGTGCCCCTCACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGSAKR*CPSLPE
Trigger: CTCGGGCAGTGAGGGGCAGCAGCGCTTGGCTGACCC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGCGGGGCACCAGGGTaGCTCTGTAAAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGGAPG*LCKGGS
Trigger: GCTGCCCCCTTTACAGAGGCACCCTGGTGCCCCGCC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCCACGACCCAGAGGGTaGCAGCCTTTCTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHPRPRG*QPFSPP
Trigger: TGGGGGTGAGAAAGGCTGCCACCCTCTGGGTCGTGG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGATGCCTGGCTGGCCTaGTCCTGGATGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHDAWLA*SWMCSI
Trigger: GATGGAGCACATCCAGGATCAGGCCAGCCAGGCATC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCACGCTCTGTGGCCCTaGGGCCAAGGTCGCATGTTT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHHALWP*GQGRMF
Trigger: AAACATGCGACCTTGGCCTCAGGGCCACAGAGCGTG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACAGGAGAGCTGCTGGCTaGTCCTCCCTTGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHRRAAG*SSLAWW
Trigger: CCACCATGCAAGGGAGGAGCAGCCAGCAGCTCTCCT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCAGTGGGATAGGTGCTaGCGGAACCAGGGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHQWDRC*RNQGVS
Trigger: AGACACCCCCTGGTTCCGCCAGCACCTATCCCACTG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACTGTGTTCAATGTGGCTaGGCTGAGCCAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHCVQCG*AEPGSG
Trigger: CCCAGACCCTGGCTCAGCTCAGCCACATTGAACACA...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGGCCGTGAGCTGTGGTaGCTGAGGTGCACACAGCCT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQGRELW*LRCTQP
Trigger: AGGCTGTGTGCACCTCAGTCACCACAGCTCACGGCC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACACCACTGGAGTGACGTaGTGCAAGCCCTCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHTTGVT*CKPSSV
Trigger: GACCGAAGAGGGCTTGCATCACGTCACTCCAGTGGT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGGCCGCAGGCCCAACTaGCCTTCTCTTCTTCGTCCG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQGRRPN*PSLLRP
Trigger: CGGACGAAGAAGAGAAGGGCAGTTGGGCCTGCGGCC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCCCGGGGTCCTAGGCTaGTTCTCACACACCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQPGVLG*FSHTRG
Trigger: TCCTCGGGTGTGTGAGAAGCAGCCTAGGACCCCGGG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCCTTACGGCCTTCTTTaGGACTCCCCGAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQPYGLL*DSPNPG
Trigger: CCCCGGGTTCGGGGAGTCGCAAAGAAGGCCGTAAGG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGAAGGTCAGTGCTCATaGGCTCTGGCCGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQEGQCS*ALAGRS
Trigger: GCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGGGCATGTTCAGCACTaGGGGCAGCAGTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHGHVQH*GQQSAH
Trigger: ATGTGCTGACTGCTGCCCGCAGTGCTGAACATGCCC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGTGGTGATGGCCTCATaGCGCCTCAGCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQVVMAS*RLSPAL
Trigger: CAGAGCAGGGCTGAGGCGCCATGAGGCCATCACCAC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGTGGTGATGGCCTCATaGCGCCTCAGCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHVVMAS*RLSPAL
Trigger: CAGAGCAGGGCTGAGGCGCCATGAGGCCATCACCAC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCTGCACCTCACGTGGTaGCGGGGACTCACATTCACA +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHLHLTW*RGLTFT
Trigger: TGTGAATGTGAGTCCCCGCCACCACGTGAGGTGCAG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGAGGGCAGCACCAACTaGCCATCGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQEGSTN*PSLSFP
Trigger: TGGGAAGGAGAGCGATGGTCAGTTGGTGCTGCCCTC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCCCCTCCCCATACCCTaGGTCACAGGTCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQPLPIP*VTGLGH
Trigger: GTGACCAAGACCTGTGACTCAGGGTATGGGGAGGGG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACAGTGTCCGGCAATGCTaGATACAGCCAGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHSVRQC*IQPVCS
Trigger: GGAGCACACTGGCTGTATTCAGCATTGCCGGACACT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGCTGCATCTGGGTCTaGAGGAGGCGATGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGCIWV*RRRWVF
Trigger: GAACACCCATCGCCTCCTTCAGACCCAGATGCAGCC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTGGGTCAGCCAAGCGCTaGTGCCCCTCACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGGSAKR*CPSLPE
Trigger: CTCGGGCAGTGAGGGGCAGCAGCGCTTGGCTGACCC...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGGTCCTGTGGCTGACTaGTTTGCTCCGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQGPVAD*FAPDHL
Trigger: CAGGTGGTCCGGAGCAAAGCAGTCAGCCACAGGACC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTCGTGGGTAGGCAGGTaGAGGTGGTGGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHSWVGR*RWWQKV
Trigger: CACCTTCTGCCACCACCTGCACCTGCCTACCCACGA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGCAGATCCAGGAGGATaGCCCACGAAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQADPGG*PTKEAW
Trigger: CCAGGCTTCCTTCGTGGGCCATCCTCCTGGATCTGC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGGACTGATGCTTGCCTaGAAGCGGATGGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHGLMLA*KRMAPS
Trigger: TGAAGGAGCCATCCGCTTCCAGGCAAGCATCAGTCC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGACCCAGGAGAGCTGCTaGCTGCTCCTCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQTQESC*LLLPCM
Trigger: CATGCAAGGGAGGAGCAGCCAGCAGCTCTCCTGGGT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGGGGATCACTATCAGTaGGATAGGTGCTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHGDHYQ*DRCWRN
Trigger: GTTCCGCCAGCACCTATCCCACTGATAGTGATCCCC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACTGCTTGCCACTTACATaGCTGCCCCTGAGACGGTCT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHCLPLT*LPLRRS
Trigger: AGACCGTCTCAGGGGCAGCCATGTAAGTGGCAAGCA...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCGACTGCACCTCACGTaGTGGCGGGGACTCACATTC +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQRLHLT*WRGLTF
Trigger: GAATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCAAAAGCCCCCGCTCTaGACAAGGCTTAACGCGAGG +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHQKPPL*TRLNAR
Trigger: CCTCGCGTTAAGCCTTGTTCAGAGCGGGGGCTTTTG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCTCTCCGGAACCCACTaGGACAGCAAAAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVLSGTH*DSKSPR
Trigger: GCGGGGGCTTTTGCTGTCGCAGTGGGTTCCGGAGAG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGGGTGTAGGCTGGTCTaGAGGTGTAAAGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHGCRLV*RCKGLC
Trigger: ACACAGACCTTTACACCTGCAGACCAGCCTACACCC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGTTCCTGCCCTCACCCTaGCCCACCAAGGGACTGGTG +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVFLPSP*PTKGLV
Trigger: CACCAGTCCCTTGGTGGGGCAGGGTGAGGGCAGGAA...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTGGACAGCGGACAGGGTaGTGCTCACGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGGQRTG*CSRSVA
Trigger: GGCCACAGAGCGTGAGCAGCACCCTGTCCGCTGTCC...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACGGCTTTGGTCACTTGTaGCCGCTTCACACTAGGACT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHGFGHL*PLHTRT
Trigger: AGTCCTAGTGTGAAGCGGGCACAAGTGACCAAAGCC...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACAAGGCCAAGTGTGGCTaGAATTCAGGATCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHKAKCG*NSGSAP
Trigger: TGGGGCAGATCCTGAATTGCAGCCACACTTGGCCTT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGGCATGTTCAGCACTaGGGGCAGCAGTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGHVQH*GQQSAH
Trigger: ATGTGCTGACTGCTGCCCGCAGTGCTGAACATGCCC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCACACACGCGCCAGCTaGACTCCTGCACCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGHTRAS*TPAPAA
Trigger: AGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGCCTTGGAGCAGAGCTaGGTGAGCATGCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQALEQS*VSMLWT
Trigger: TGTCCAGAGCATGCTCACCCAGCTCTGCTCCAAGGC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGCTCAGGCAACTGTTTaGTCATGCCAACCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHAQATV*SCQPLP
Trigger: GGGGAGGGGTTGGCATGACCAAACAGTTGCCTGAGC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCCACGACCCAGAGGGTaGCAGCCTTTCTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVPRPRG*QPFSPP
Trigger: TGGGGGTGAGAAAGGCTGCCACCCTCTGGGTCGTGG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGTATGTGGGTGGGAGCTaGAGTGTGGCCTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQYVGGS*SVASAM
Trigger: CATGGCAGAGGCCACACTCCAGCTCCCACCCACATA...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGACAGAAGCCAACGGCTaGAGCCAACGGGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVTEANG*SQRAMP
Trigger: GGGCATGGCCCGTTGGCTCCAGCCGTTGGCTTCTGT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCCCAACAAGCAGTGCTaGGCCTGGGCGGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGPNKQC*AWAVGH
Trigger: ATGCCCCACCGCCCAGGCCCAGCACTGCTTGTTGGG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGCAGCCCCTGCAATCTaGGGTCTAGCCTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVAAPAI*GLACRR
Trigger: ACGCCGACAGGCTAGACCCCAGATTGCAGGGGCTGC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCTACTTAGGACCACTTaGGGGCACAACTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHLLRTT*GHNFSF
Trigger: GAAGCTGAAGTTGTGCCCTCAAGTGGTCCTAAGTAG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGCTGCTGCCCCTCACTaGCCGAGGGCAGAAACCGTC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAAAAPH*PRAETV
Trigger: GACGGTTTCTGCCCTCGGGCAGTGAGGGGCAGCAGC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGTGCTGCGAAATCACCTaGACTCTCCGGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQCCEIT*TLRNPL
Trigger: CAGTGGGTTCCGGAGAGTGCAGGTGATTTCGCAGCA...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGTGGTGGACGCTACACTaGTCACGTAGCTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQWWTLH*SRSWWC
Trigger: ACACCACCAGCTACGTGAGCAGTGTAGCGTCCACCA...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGCCACGTGGGAACCATaGTGCCAGACACCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQATWEP*CQTPET
Trigger: AGTTTCTGGTGTCTGGCAGCATGGTTCCCACGTGGC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTATGGCGCCTCAGCCCTaGTCTGCCTGCTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGMAPQP*SACCAL
Trigger: GAGAGCACAGCAGGCAGAGCAGGGCTGAGGCGCCAT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATATGTTCACACGGGTCTaGAGACCTTCCCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHMFTRV*RPSPRG
Trigger: TCCTCGTGGGGAAGGTCTGCAGACCCGTGTGAACAT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGCAACACCTACGAGATaGTATCACACACGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHATPTR*YHTRAS
Trigger: GCTGGCGCGTGTGTGATAGCATCTCGTAGGTGTTGC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACTCGTATAGGGTAAGGTaGTGCACGTATGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHSYRVR*CTYAKA
Trigger: CGCCTTTGCATACGTGCACCACCTTACCCTATACGA...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGTCCTGTCTGAGCTGGTaGACGCTACACTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQSCLSW*TLHCSR
Trigger: ACGTGAGCAGTGTAGCGTCCACCAGCTCAGACAGGA...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGACCCAGGAGAGCTGCTaGCTGCTCCTCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVTQESC*LLLPCM
Trigger: CATGCAAGGGAGGAGCAGCCAGCAGCTCTCCTGGGT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCTCTTCGGTCACTCTTaGCTTCCACCAGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQLFGHS*LPPGVS
Trigger: AGAGACCCCTGGTGGAAGCCAAGAGTGACCGAAGAG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGCTCAATGGTACTGTaGGGCTTGCCTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVGSMVL*GLPGCQ
Trigger: CTGACAGCCAGGCAAGCCTCACAGTACCATTGAGCC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCAGAGGGGCAGGTACTaGGGACTTCAATACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHQRGRY*GLQYCP
Trigger: AGGACAGTATTGAAGTCCTCAGTACCTGCCCCTCTG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGGGGTACTGGCGGATaGATTTTAAGGCGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHRGTGG*ILRRSG
Trigger: GCCAGAACGCCTTAAAATTCATCCGCCAGTACCCCT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGACATAGTCAAACCTaGGCATGGGGTGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVGHSQT*AWGGWS
Trigger: GGACCAGCCACCCCATGCTCAGGTTTGACTATGTCC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGAAAGAGTATGGGGAGTaGGTCCCAAGGCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVKEYGE*VPRPAH
Trigger: GTGAGCGGGCCTTGGGACTCACTCCCCATACTCTTT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGAAATCCGTGCTATTTaGGTTCTCATCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQEIRAI*VLIGWA
Trigger: GGCCCAGCCGATGAGAACTCAAATAGCACGGATTTC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACCCAGAGGCAGAACCTaGAGAGCGCCACGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAPRGRT*RAPRGS
Trigger: GCTACCACGTGGCGCTCTTCAGGTTCTGCCTCTGGG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTGGGAGCAAGGACCCTaGACAGAAGCCAACGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGWEQGP*TEANGW
Trigger: CCAGCCGTTGGCTTCTGTTCAGGGTCCTTGCTCCCA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCGACTCTCCTGTCTGTaGACATGCGCAACGGGCACA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVRLSCL*TCATGT
Trigger: TGTGCCCGTTGCGCATGTTCACAGACAGGAGAGTCG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCTTCTGAACCACCCTTaGGGGTGTGTGCCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQLLNHP*GCVPAN
Trigger: ATTTGCTGGCACACACCCTCAAGGGTGGTTCAGAAG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACTCTCCGGAACCCACTaGGACAGCAAAAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEALSGTH*DSKSPR
Trigger: GCGGGGGCTTTTGCTGTCGCAGTGGGTTCCGGAGAG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACCCGGGGTCCTAGGCTaGTTCTCACACACCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAPGVLG*FSHTRG
Trigger: TCCTCGGGTGTGTGAGAAGCAGCCTAGGACCCCGGG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGGTTGGGGTCCCACCTaGTCAGAGAACTCGGAAATA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQGWGPT*SENSEI
Trigger: TATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAACC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGGTGTAGGCTGGTCTaGAGGTGTAAAGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGCRLV*RCKGLC
Trigger: ACACAGACCTTTACACCTGCAGACCAGCCTACACCC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCCTGGGGGTCGAAACTaGTCAACTCAGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHPGGRN*STQSLP
Trigger: TGGAAGTGACTGAGTTGAGCAGTTTCGACCCCCAGG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCTGTGTGCGGTGGTCTaGCAGGCGGGGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGLCAVV*QAGHQG
Trigger: ACCCTGGTGCCCCGCCTGGCAGACCACCGCACACAG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACACGAGGAAGGTCAGTaGTCATGCGCTCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAHEEGQ*SCALAG
Trigger: GCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTTGCCTGGAAGCGGATaGCTCCTTCATTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHLPGSG*LLHCHL
Trigger: CAGATGGCAATGAAGGAGCCATCCGCTTCCAGGCAA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTGTCTCACCCAGTTCTaGAGGACTGATGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHCLTQF*RTDACL
Trigger: CAGGCAAGCATCAGTCCTCCAGAACTGGGTGAGACA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGGGTGGCTGGTCCCTaGAGATTCCTGCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVGVAGP*RFLHVV
Trigger: CACTACATGCAGGAATCTCCAGGGACCAGCCACCCC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGCTCAGGCAACTGTTTaGTCATGCCAACCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVAQATV*SCQPLP
Trigger: GGGGAGGGGTTGGCATGACCAAACAGTTGCCTGAGC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACACCACAACAGTTACCTaGCTGTCACCCTCGTTCATT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHTTTVT*LSPSFI
Trigger: AATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCTCACCCCCACTGGCTaGTCCAGGGCCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGLTPTG*SRASPR
Trigger: CCTAGGGGAGGCCCTGGACCAGCCAGTGGGGGTGAG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACATCATGACTCAGTCCTaGTACCACGTCAAGATCCCT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHIMTQS*YHVKIP
Trigger: AGGGATCTTGACGTGGTACCAGGACTGAGTCATGAT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGCACTCCCAAGAAGCTaGGCCCCTACCAACAGATTA +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHALPRS*APTNRL
Trigger: TAATCTGTTGGTAGGGGCCCAGCTTCTTGGGAGTGC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCAGGGGTTAGCACCCTaGCTGGCGAAGGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKQGLAP*LAKGKS
Trigger: GCTCTTCCCCTTCGCCAGTCAGGGTGCTAACCCCTG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCCTGGAACTGCTGCATaGTTTTATGCTGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQPGTAA*FYAGLQ
Trigger: CTGCAGACCAGCATAAAATCATGCAGCAGTTCCAGG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCCCTTCAACTTCCGATaGGGGTATGAGCGGATCTGC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVPFNFR*GYERIC
Trigger: GCAGATCCGCTCATACCCTCATCGGAAGTTGAAGGG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGTTCCTGCTCCATCTTaGTCAACACAGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHVPAPS*STQTPH
Trigger: GTGTGGAGTCTGTGTTGATCAAGATGGAGCAGGAAC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCAAGTGTCCTCCCACTaGGCAGGGAGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGQVSSH*AGSRWL
Trigger: CAGCCATCTACTCCCTGCTCAGTGGGAGGACACTTG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCCCAGAGGCAGAACCTaGAGAGCGCCACGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKPRGRT*RAPRGS
Trigger: GCTACCACGTGGCGCTCTTCAGGTTCTGCCTCTGGG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGCAATAGTGAGGACTaGGAAAGTAGCAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHSNSED*ESSKGH
Trigger: GTGCCCCTTGCTACTTTCTCAGTCCTCACTATTGCT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAGCCGCCCTGGCGCGTaGAATGAAATTGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEASRPGA*NEIGGP
Trigger: AGGCCCACCAATTTCATTTCACGCGCCAGGGCGGCT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGCAGAATCTGTGAGTTaGCTCACCAGTCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQAESVS*LTSPYS
Trigger: ACTGTAGGGACTGGTGAGTCAACTCACAGATTCTGC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCCAGCACAAGAAACCTaGTGCGAAATCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHPAQET*CEITCT
Trigger: AGTGCAGGTGATTTCGCAGCAGGTTTCTTGTGCTGG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGGAAGTGGGAAAGAATaGGGTGTTAATCGACGCGCA +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHGSGKE*GVNRRA
Trigger: TGCGCGTCGATTAACACCGCATTCTTTCCCACTTCC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGTGTCAAGGTCCAGGATaGTCGTGTAGCGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVCQGPG*SCSGCS
Trigger: GCTACAGCCGCTACACGAGCATCCTGGACCTTGACA...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTTCCTGCCCTCACCCTaGCCCACCAAGGGACTGGTG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKFLPSP*PTKGLV
Trigger: CACCAGTCCCTTGGTGGGGCAGGGTGAGGGCAGGAA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAGGAGAGCTGCTGGCTaGTCCTCCCTTGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEARRAAG*SSLAWW
Trigger: CCACCATGCAAGGGAGGAGCAGCCAGCAGCTCTCCT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCTGGAGTGTGGCCTCTaGCATGTTCACACGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGLECGL*HVHTGL
Trigger: CAGACCCGTGTGAACATGGCAGAGGCCACACTCCAG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACTTCACATTTAAAGGCTaGCAAGGTATTGCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHFTFKG*QGIAGD
Trigger: GTCGCCAGCAATACCTTGGCAGCCTTTAAATGTGAA...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCTGCAATTCAGGATCTaGCCCAAACTCATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQLQFRI*PKLISP
Trigger: AGGGCTGATGAGTTTGGGGCAGATCCTGAATTGCAG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATACCCTTGAGGGTGTGTaGCAGCAAATACCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHTLEGV*QQIPQV
Trigger: CACTTGAGGTATTTGCTGGCACACACCCTCAAGGGT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACAGTGTTAACTGCCTCTaGCCAAATCATGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHSVNCL*PNHDSV
Trigger: GACTGAGTCATGATTTGGGCAGAGGCAGTTAACACT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGGCAGCAGTCAGCACATaGAAGACATTCAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQAAVST*KTFSEQ
Trigger: CTGCTCACTGAATGTCTTGCATGTGCTGACTGCTGC...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGTAGGTGGCAGCCCCTaGAATCTGGGGTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAVGGSP*NLGSSL
Trigger: CAGGCTAGACCCCAGATTGCAGGGGCTGCCACCTAC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATCCTGCACCAGCCGCTaGAACGACTGCACCTCACGT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEASCTSR*NDCTSR
Trigger: ACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCGCCAGCTGCACTCCTaGACCAGCCGCTGCAACGAC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGRQLHS*TSRCND
Trigger: GTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCTCCCAGCACCACCTTaGAGTCCTCCACGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVLPAPP*SPPRSS
Trigger: TGAACTTCGTGGAGGACTCCAAGGTGGTGCTGGGAG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCTCTATCAATCTGACTaGTCAGGAGGTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHLYQSD*SGGNTG
Trigger: ACCTGTGTTACCTCCTGACCAGTCAGATTGATAGAG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACACACAGACTCCACACTaGACTTGTAAGAACCAACAC +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHTQTPH*TCKNQH
Trigger: GTGTTGGTTCTTACAAGTCCAGTGTGGAGTCTGTGT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCACTGCTCACGTAGCTaGTGGTGTCTGAGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHHCSRS*WCLSSC
Trigger: ACAACTACTCAGACACCACCAGCTACGTGAGCAGTG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTAACCTGAGCATGGGGTaGCTGGTCCCTGGAGATTCC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGNLSMG*LVPGDS
Trigger: GGAATCTCCAGGGACCAGCCACCCCATGCTCAGGTT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCAGTGCTCATGCGCTCTaGCCGGCAGGAGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGSAHAL*PAGASG
Trigger: CCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACT...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCTAGAAGGCCAAGTGTaGCTGCAATTCAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQLEGQV*LQFRIC
Trigger: GCAGATCCTGAATTGCAGCCACACTTGGCCTTCTAG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAAGCAGTGCTGGGCCTaGGCGGTGGGGCATGTTCAG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKKQCWA*AVGHVQ
Trigger: CTGAACATGCCCCACCGCCCAGGCCCAGCACTGCTT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGCAGCCCCTGCAATCTaGGGTCTAGCCTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKAAPAI*GLACRR
Trigger: ACGCCGACAGGCTAGACCCCAGATTGCAGGGGCTGC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACGACTGCACCTCACGTaGTGGCGGGGACTCACATTC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEARLHLT*WRGLTF
Trigger: GAATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACAAAAGCCCCCGCTCTaGACAAGGCTTAACGCGAGG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAQKPPL*TRLNAR
Trigger: CCTCGCGTTAAGCCTTGTTCAGAGCGGGGGCTTTTG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCAGGGGTTAGCACCCTaGCTGGCGAAGGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGQGLAP*LAKGKS
Trigger: GCTCTTCCCCTTCGCCAGTCAGGGTGCTAACCCCTG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGGCTCAATGGTACTGTaGGGCTTGCCTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAGSMVL*GLPGCQ
Trigger: CTGACAGCCAGGCAAGCCTCACAGTACCATTGAGCC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGAGGGCAGCACCAACTaGCCATCGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKEGSTN*PSLSFP
Trigger: TGGGAAGGAGAGCGATGGTCAGTTGGTGCTGCCCTC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGACCACCTGCACCAGCTaGCTAAACAGAACCGTTGCT +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVTTCTS*LNRTVA
Trigger: AGCAACGGTTCTGTTTAGTCAGCTGGTGCAGGTGGT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGAAATCCGTGCTATTTaGGTTCTCATCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVEIRAI*VLIGWA
Trigger: GGCCCAGCCGATGAGAACTCAAATAGCACGGATTTC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACCAATTAACCAGCCAGTaGGAAAACGAATCAGCATCT +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHQLTSQ*ENESAS
Trigger: AGATGCTGATTCGTTTTCTCACTGGCTGGTTAATTG...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATGCGCCCGGCCTCAACTaGAAATTCTTGATGAGATTA +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHAPGLN*KFLMRL
Trigger: TAATCTCATCAAGAATTTTCAGTTGAGGCCGGGCGC...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCCCTGGCGCGTGAAATaGAATTGGTGGGCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGPWRVK*NWWAFL
Trigger: TAGGAAGGCCCACCAATTTCATTTCACGCGCCAGGG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGTATAGGGTAAGGTGGTaGACGTATGCAAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVYRVRW*TYAKAP
Trigger: GGGCGCCTTTGCATACGTGCACCACCTTACCCTATA...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTATGTTCACACGGGTCTaGAGACCTTCCCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGMFTRV*RPSPRG
Trigger: TCCTCGTGGGGAAGGTCTGCAGACCCGTGTGAACAT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGAAGGCCAAGTGTGGCTaGAATTCAGGATCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVKAKCG*NSGSAP
Trigger: TGGGGCAGATCCTGAATTGCAGCCACACTTGGCCTT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCTTCCCAGTGTTAACTaGCTCTGCCCAAATCATGAC +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHLPSVN*LCPNHD
Trigger: GTCATGATTTGGGCAGAGGCAGTTAACACTGGGAAG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGTGTGGGTGGAGCAGCTaGTGCAGAATCTGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVCGWSS*CRICEL
Trigger: CAACTCACAGATTCTGCAGCAGCTGCTCCACCCACA...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCAGCCGCTGCAACGACTaGACCTCACGTGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSSRCND*TSRGGG
Trigger: CCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTCCTGCACCAGCCGCTaGAACGACTGCACCTCACGT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSCTSR*NDCTSR
Trigger: ACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACAGGGAGTAGATGGCTaGGTGGGCAAAGGGGTACTG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAQGVDG*VGKGVL
Trigger: CAGTACCCCTTTGCCCACCCAGCCATCTACTCCCTG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTTTAGGAAGCTCATCTaGCGGCTGGCTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGFRKLI*RLATSS
Trigger: GGAGCTGGTAGCCAGCCGCCAGATGAGCTTCCTAAA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATACCACAACAGTTACCTaGCTGTCACCCTCGTTCATT +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHTTTVT*LSPSFI
Trigger: AATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCTCTTCGGTCACTCTTaGCTTCCACCAGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGLFGHS*LPPGVS
Trigger: AGAGACCCCTGGTGGAAGCCAAGAGTGACCGAAGAG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACAAGGTAAAGGCCAGATaGGGAATGAAAGGTAAGGTA +
Preference number: 4 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHKVKAR*GMKGKV
Trigger: TACCTTACCTTTCATTCCCCATCTGGCCTTTACCTT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGCACTCCCAAGAAGCTaGGCCCCTACCAACAGATTA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVALPRS*APTNRL
Trigger: TAATCTGTTGGTAGGGGCCCAGCTTCTTGGGAGTGC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp GCAGCCCCTGCAATCTGGGGTCTAGCCTGTCGGCGTTaGCTTTATTGTGGGTGGAGCAGCTGCTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: AAPAIWGLACRR*LYCGWSSCCRI
Trigger: GATTCTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGACAGGCTAGACCCCAGATTGCAGGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCCTGGAACTGCTGCATaGTTTTATGCTGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVPGTAA*FYAGLQ
Trigger: CTGCAGACCAGCATAAAATCATGCAGCAGTTCCAGG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATCAATGTGGCTGAGCTaGGCCAGGGTCTGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEASMWLS*ARVWVK
Trigger: TTTCACCCAGACCCTGGCTCAGCTCAGCCACATTGA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTACCACCTGCACCAGCTaGCTAAACAGAACCGTTGCT +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGTTCTS*LNRTVA
Trigger: AGCAACGGTTCTGTTTAGTCAGCTGGTGCAGGTGGT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGTACAGAGAACCAATaGGATGTAGGCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVGTENQ*DVGSTI
Trigger: GATGGTGCTGCCTACATCTCATTGGTTCTCTGTACC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCTTCTGAACCACCCTTaGGGGTGTGTGCCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGLLNHP*GCVPAN
Trigger: ATTTGCTGGCACACACCCTCAAGGGTGGTTCAGAAG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTAATGAAGAACCACCTTaGGGGAGACCAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGNEEPP*GRPALL
Trigger: AAGCAGGGCTGGTCTCCCTCAAGGTGGTTCTTCATT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCTAAAGTGGGGCTTTTaGAAATCACCAGTCCACAAC +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQLKWGF*KSPVHN
Trigger: GTTGTGGACTGGTGATTTTCAAAAGCCCCACTTTAG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGAGGCCAGATGGGGAATaGAAGGTAAGGTACTGTGGT +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVRPDGE*KVRYCG
Trigger: ACCACAGTACCTTACCTTTCATTCCCCATCTGGCCT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCAGCCGCCCTGGCGCGTaGAATGAAATTGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGSRPGA*NEIGGP
Trigger: AGGCCCACCAATTTCATTTCACGCGCCAGGGCGGCT...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGATAAACCCCCTGGCTaGGGCAATCCTACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEADKPPG*GNPTGC
Trigger: ACAGCCAGTAGGATTGCCTCAGCCAGGGGGTTTATC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCTGCTGCAGAATCTGTaGGTTGACTCACCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGLLQNL*VDSPVP
Trigger: AGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTCAGCCAAGCGCTGCTaGCCCTCACTGCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATSAKRC*PSLPEG
Trigger: GCCCTCGGGCAGTGAGGGGCAGCAGCGCTTGGCTGA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATAGCTCCTGGAACTGCTaGATGATTTTATGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHSSWNC*MILCWS
Trigger: AGACCAGCATAAAATCATGCAGCAGTTCCAGGAGCT...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGTTAGAGGTAGTGGATaGCTGGCTGGCCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAVRGSG*LAGLIL
Trigger: CAGGATCAGGCCAGCCAGGCATCCACTACCTCTAAC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTCATCTCCCAGTTCCTaGTCCATCTTGATCAACACA +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHSSPSS*SILINT
Trigger: TGTGTTGATCAAGATGGAGCAGGAACTGGGAGATGA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTGGAGGACTGATGCTTaGCTGGAAGCGGATGGCTCC +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKWRTDA*LEADGS
Trigger: GGAGCCATCCGCTTCCAGGCAAGCATCAGTCCTCCA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATGGTGGACGCTACACTaGTCACGTAGCTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAWWTLH*SRSWWC
Trigger: ACACCACCAGCTACGTGAGCAGTGTAGCGTCCACCA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCCAGCCCTCTTTTTATaGCTATCGGAAGACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVPALFL*LSEDRP
Trigger: TGGCCTGTCTTCCGATAGGCATAAAAAGAGGGCTGG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTGGCTTTGGTCACTTGTaGCCGCTTCACACTAGGACT +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGGFGHL*PLHTRT
Trigger: AGTCCTAGTGTGAAGCGGGCACAAGTGACCAAAGCC...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGAGGGAGACCAGCCCTaGTTGCCACTTACATGGCTG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKEGDQP*LPLTWL
Trigger: CAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCCCTC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGTCGGCTGAAAGCTCCTaGAACTGCTGCATGATTTTA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQSAESS*NCCMIL
Trigger: TAAAATCATGCAGCAGTTCCAGGAGCTTTCAGCCGA...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTCGTTGGCTTTCTTCTaGATCTCCGTTTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHSLAFF*ISVSVC
Trigger: ACACACAGAAACGGAGATCCAGAAGAAAGCCAACGA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGTGCTTTGATAAGTTTTaGGGTGTAGGCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQCFDKF*GVGWSA
Trigger: TGCAGACCAGCCTACACCCCAAAACTTATCAAAGCA...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAGAGTGTGTGTGGGCTaGAGTGGAGGGCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKRVCVG*SGGQHQ
Trigger: TTGGTGCTGCCCTCCACTCCAGCCCACACACACTCT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCTCTACACGGAACCCCTaGTCCTTCTGCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGSTRNP*SFCLWR
Trigger: GCGCCACAGGCAGAAGGACCAGGGGTTCCGTGTAGA...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAGCTCATCTGGCGGCTaGCTACCAGCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSSSGG*LPAPLS
Trigger: AGACAGAGGAGCTGGTAGCCAGCCGCCAGATGAGCT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTAGCTCAGCCAGGTACTaGACCACCCTAACATCCTCA +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGSSARY*TTLTSS
Trigger: TGAGGATGTTAGGGTGGTCCAGTACCTGGCTGAGCT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGCCCCACCAAGGGACTaGTGGCTTCCCTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSAPPRD*WLPFCP
Trigger: AGGGCAGAAGGGAAGCCACCAGTCCCTTGGTGGGGC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTAAAGGTTTATGTGGGTaGGAGCTGGAGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGKGLCG*ELECGL
Trigger: GAGGCCACACTCCAGCTCCCACCCACATAAACCTTT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp CGCCACGTGGTAGCTCATCCAGGAAATCCGTGCTATTaGAGTTCTCATCGGCTGGGCCAACCACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RHVVAHPGNPCY*SSHRLGQPPAP
Trigger: TGGTGCAGGTGGTTGGCCCAGCCGATGAGAACTCAAATAGCACGGATTTCCTGGATGAGCTACCACGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp GCTGCAAGAAACTCTCTGTCTACAAACCAGTGGCCATaGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACT +
Preference number: 4 (lower is better)
Translates to: AARNSLSTNQWP*PKEARGGQGIT
Trigger: AGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGTTTGTAGACAGAGAGTTTCTTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTCAATGTGGCTGAGCTaGGCCAGGGTCTGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSMWLS*ARVWVK
Trigger: TTTCACCCAGACCCTGGCTCAGCTCAGCCACATTGA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTACTTTCACCACTGCTaGTACTCCCTTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHYFHHC*YSLSYP
Trigger: TGGATATGAAAGGGAGTATCAGCAGTGGTGAAAGTA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGTACTTTCACCACTGCTaGTACTCCCTTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQYFHHC*YSLSYP
Trigger: TGGATATGAAAGGGAGTATCAGCAGTGGTGAAAGTA...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGTAGCTGGTGGTGTCTaGGTAGTTGTCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKVAGGV*VVVQAG
Trigger: ACCAGCCTGGACAACTACTCAGACACCACCAGCTAC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCAAGTGTCCTCCCACTaGGCAGGGAGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGQVSSH*AGSRWL
Trigger: CAGCCATCTACTCCCTGCTCAGTGGGAGGACACTTG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGAGGTGCTGCCCCGCTTaGTCTGTGTGCGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHARCCPA*SVCGGL
Trigger: CAGACCACCGCACACAGATCAAGCGGGGCAGCACCT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGGCCGTGAGCTGTGGTaGCTGAGGTGCACACAGCCT +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAGRELW*LRCTQP
Trigger: AGGCTGTGTGCACCTCAGTCACCACAGCTCACGGCC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACAGTGGTGGTGCCAGTaGTCACTTTCTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAQWWCQ*SLSDLP
Trigger: AGGAAGGTCAGAAAGTGATCACTGGCACCACCACTG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTTCAGTTCCCCGGAGTaGAGGGGGCATAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAFSSPE*RGHREG
Trigger: CCCCTCCCTATGCCCCCTTCACTCCGGGGAACTGAA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGACTGTTTTCAACCACTaGAGCAAAGAAGGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQTVFNH*SKEGKG
Trigger: GCCTTTACCTTCTTTGCTTCAGTGGTTGAAAACAGT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGGTCCTGTGGCTGACTaGTTTGCTCCGGACCACCTG +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSGPVAD*FAPDHL
Trigger: CAGGTGGTCCGGAGCAAAGCAGTCAGCCACAGGACC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGGCGGGGCACCAGGGTaGCTCTGTAAAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGGGAPG*LCKGGS
Trigger: GCTGCCCCCTTTACAGAGGCACCCTGGTGCCCCGCC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCTGTGTGCGGTGGTCTaGCAGGCGGGGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGLCAVV*QAGHQG
Trigger: ACCCTGGTGCCCCGCCTGGCAGACCACCGCACACAG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCAAACCAGTGGCCATTaGCTAAGGAGGCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGQTSGH*LRRLGE
Trigger: CTCCCCGAGCCTCCTTAGGCAATGGCCACTGGTTTG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTGCAGCAGTCAGCACATaGAAGACATTCAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGAAVST*KTFSEQ
Trigger: CTGCTCACTGAATGTCTTGCATGTGCTGACTGCTGC...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGGGTGGAGCAGCTGCTaGAGAATCTGTGAGTTGACT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAGWSSC*RICELT
Trigger: AGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGTAGGTGGCAGCCCCTaGAATCTGGGGTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSVGGSP*NLGSSL
Trigger: CAGGCTAGACCCCAGATTGCAGGGGCTGCCACCTAC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGCCGCTGCAACGACTaGACCTCACGTGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATSRCND*TSRGGG
Trigger: CCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTGCTCACGTAGCTGGTaGTGTCTGAGTAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGCSRSW*CLSSCP
Trigger: TGGACAACTACTCAGACACCACCAGCTACGTGAGCA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCTACTAGGAGCCACGTaGGAACCATGCTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKLLGAT*EPCCQT
Trigger: TGTCTGGCAGCATGGTTCCCACGTGGCTCCTAGTAG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCCACCAAGGGACTGGTaGCTTCCCTTCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAPPRDW*LPFCPG
Trigger: GCCAGGGCAGAAGGGAAGCCACCAGTCCCTTGGTGG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCTCCAGCCCCCAAGGTaGTCCTCACCATTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGLQPPR*SSPLAL
Trigger: CAAAGCCAATGGTGAGGACCACCTTGGGGGCTGGAG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCGTACTACAGGCCGATaGGCAGGCCGGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATRTTGR*AGRASA
Trigger: TGCTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGACAGAAGCCAACGGCTaGAGCCAACGGGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHATEANG*SQRAMP
Trigger: GGGCATGGCCCGTTGGCTCCAGCCGTTGGCTTCTGT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp GCCCCCAAGGTGGTCCTCACCATTGGCTTTGGTCACTaGTGCCCGCTTCACACTAGGACTAGTGAACACTCT +
Preference number: 4 (lower is better)
Translates to: APKVVLTIGFGH*CPLHTRTSEHS
Trigger: AGAGTGTTCACTAGTCCTAGTGTGAAGCGGGCACAAGTGACCAAAGCCAATGGTGAGGACCACCTTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCACTCTTCCTCTTTGGTaGAGGCCACTACGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGTLPLW*RPLRQG
Trigger: CCCCTGACGTAGTGGCCTTCACCAAAGAGGAAGAGT...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTAACACAGGTCTCCTCTaGACATGTGTTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGNTGLL*TCVQCG
Trigger: GCCACATTGAACACATGTTCAGAGGAGACCTGTGTT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCAGAGGGGCAGGTACTaGGGACTTCAATACTGTCCT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKQRGRY*GLQYCP
Trigger: AGGACAGTATTGAAGTCCTCAGTACCTGCCCCTCTG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCCAGTTCTGGAGGACTaGTGCTTGCCTGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSPVLED*CLPGSG
Trigger: TCCGCTTCCAGGCAAGCATCAGTCCTCCAGAACTGG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCAGAGGGGATCCTGTCTaGGCTGGTGGACGCTACACT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSRGDPV*AGGRYT
Trigger: AGTGTAGCGTCCACCAGCTCAGACAGGATCCCCTCT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGGTGCTGCCCCGCTTaGTCTGTGTGCGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATRCCPA*SVCGGL
Trigger: CAGACCACCGCACACAGATCAAGCGGGGCAGCACCT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTCCCTTGCATGGTGGTaGTGGCCTCATGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHASLAWW*WPHGAS
Trigger: TGAGGCGCCATGAGGCCATCACCACCATGCAAGGGA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTGGGAGCAAGGACCCTaGACAGAAGCCAACGGCTGG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAWEQGP*TEANGW
Trigger: CCAGCCGTTGGCTTCTGTTCAGGGTCCTTGCTCCCA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGACGTCAAGATCCCTTTaGAAGGAAACATACTTTGCA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQTSRSL*KETYFA
Trigger: TGCAAAGTATGTTTCCTTTCAAAGGGATCTTGACGT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCCTCCACTCTTGGGCTaGATAAGCACTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKPPLLG*ISTPKK
Trigger: CTTCTTGGGAGTGCTTATTCAGCCCAAGAGTGGAGG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGGAAGTGGGAAAGAATaGGGTGTTAATCGACGCGCA +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAGSGKE*GVNRRA
Trigger: TGCGCGTCGATTAACACCGCATTCTTTCCCACTTCC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAAGGTGGTGCACGTATaGAAAGGCGCCCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKKVVHV*KGALLR
Trigger: TCTAAGGAGGGCGCCTTTGCATACGTGCACCACCTT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGACACTTGGTGGACTTTaGTTTGATAAGTTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQTLGGL*FDKFWG
Trigger: ACCCCAAAACTTATCAAAGCAAAGTCCACCAAGTGT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTGGTACTGTGAGGCTTaGCTGGCTGTCAGATTTAGA +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGWYCEA*LAVRFR
Trigger: TCTAAATCTGACAGCCAGGCAAGCCTCACAGTACCA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCTGGAGGACTGATGCTTaGCTGGAAGCGGATGGCTCC +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSWRTDA*LEADGS
Trigger: GGAGCCATCCGCTTCCAGGCAAGCATCAGTCCTCCA...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCCCTTCTGCCCTGGCTaGCAGTCCTCAGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGPFCPG*QSSENQ
Trigger: TTGGTTTTCTGAGGACTGGCAGCCAGGGCAGAAGGG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTATGGCGCCTCAGCCCTaGTCTGCCTGCTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATMAPQP*SACCAL
Trigger: GAGAGCACAGCAGGCAGAGCAGGGCTGAGGCGCCAT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATTCCCCCAAAGGCCTTaGACACCTTCTGATAAACCC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAFPQRP*TPSDKP
Trigger: GGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCAGGAAAACTTAGTTTaGCCAGCCTTGTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGQENLV*PALSAE
Trigger: CTCAGCTGACAAGGCTGGGCAAACTAAGTTTTCCTG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAACAGATTAATCGGCTaGAGAGTGCTCATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEANRLIG*RVLIPS
Trigger: GGAGGGGATGAGCACTCTGCAGCCGATTAATCTGTT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGGGTGGAGCAGCTGCTaGAGAATCTGTGAGTTGACT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKGWSSC*RICELT
Trigger: AGTCAACTCACAGATTCTGCAGCAGCTGCTCCACCC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCGCAACACCTACGAGATaGTATCACACACGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGATPTR*YHTRAS
Trigger: GCTGGCGCGTGTGTGATAGCATCTCGTAGGTGTTGC...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCCACGAAGTTCAGCTTaGGGTAGGCAGATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGPRSSA*GRQIQE
Trigger: CTCCTGGATCTGCCTACCCCAAGCTGAACTTCGTGG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGTCGGCTGAAAGCTCCTaGAACTGCTGCATGATTTTA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVSAESS*NCCMIL
Trigger: TAAAATCATGCAGCAGTTCCAGGAGCTTTCAGCCGA...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTACTGTGAGGCTTGCCTaGCTGTCAGATTTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGTVRLA*LSDLES
Trigger: GCTTTCTAAATCTGACAGCCAGGCAAGCCTCACAGT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTTGCCTGGAAGCGGATaGCTCCTTCATTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKLPGSG*LLHCHL
Trigger: CAGATGGCAATGAAGGAGCCATCCGCTTCCAGGCAA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTCTACACGGAACCCCTaGTCCTTCTGCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHASTRNP*SFCLWR
Trigger: GCGCCACAGGCAGAAGGACCAGGGGTTCCGTGTAGA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTTGATCTGTGTGCGGTaGTCTGCCAGGCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATLICVR*SARRGT
Trigger: GGTGCCCCGCCTGGCAGACCACCGCACACAGATCAA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGCCTTGGAGCAGAGCTaGGTGAGCATGCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSALEQS*VSMLWT
Trigger: TGTCCAGAGCATGCTCACCCAGCTCTGCTCCAAGGC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCAGCTCATCTGGCGGCTaGCTACCAGCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSSSSGG*LPAPLS
Trigger: AGACAGAGGAGCTGGTAGCCAGCCGCCAGATGAGCT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACTCACCCCCACTGGCTaGTCCAGGGCCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGLTPTG*SRASPR
Trigger: CCTAGGGGAGGCCCTGGACCAGCCAGTGGGGGTGAG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGCCGGCAGGAGCCAGTaGGCCACCCAGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQAGRSQ*ATQESC
Trigger: GCAGCTCTCCTGGGTGGCCCACTGGCTCCTGCCGGC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATTGCAAAGGTTTATGTaGGTGGGAGCTGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEALQRFM*VGAGVW
Trigger: CCACACTCCAGCTCCCACCCACATAAACCTTTGCAA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCAAGGAGGGAACCACTaGAGTGACGTGATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGQGGNH*SDVMQA
Trigger: GGCTTGCATCACGTCACTCCAGTGGTTCCCTCCTTG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTACCAGTTTCAGTACCTaGGCCCTCAAAGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGTSFST*ALKAIV
Trigger: CACTATTGCTTTGAGGGCCCAGGTACTGAAACTGGT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp TTAATGAAGAACCACCTTGAGGGAGACCAGCCCTGCTaGCCACTTACATGGCTGCCCCTGAGACGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LMKNHLEGDQPC*PLTWLPLRRSV
Trigger: AACAGACCGTCTCAGGGGCAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCCCTCAAGGTGGTTCTTCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp CCTCCAACTGCAGCCGCCCTGGCGCGTGAAATGAAATaGGTGGGCCTTCCTAGGATTGTAAAATGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PPTAAALAREMK*VGLPRIVKWDL
Trigger: CAAGTCCCATTTTACAATCCTAGGAAGGCCCACCAATTTCATTTCACGCGCCAGGGCGGCTGCAGTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTGCTTCAGCAGGTCTTaGTGTTCAATGATGGACTTC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGCFSRS*CSMMDF
Trigger: GAAGTCCATCATTGAACATCAAGACCTGCTGAAGCA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAACACAGGTCTCCTCTaGACATGTGTTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEANTGLL*TCVQCG
Trigger: GCCACATTGAACACATGTTCAGAGGAGACCTGTGTT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGAGAGGGGATCCTGTCTaGGCTGGTGGACGCTACACT +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHARGDPV*AGGRYT
Trigger: AGTGTAGCGTCCACCAGCTCAGACAGGATCCCCTCT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTGGCTGCATCTGGGTCTaGAGGAGGCGATGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATGCIWV*RRRWVF
Trigger: GAACACCCATCGCCTCCTTCAGACCCAGATGCAGCC...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCACGCTCTGTGGCCCTaGGGCCAAGGTCGCATGTTT +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATHALWP*GQGRMF
Trigger: AAACATGCGACCTTGGCCTCAGGGCCACAGAGCGTG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTCCCTTGCATGGTGGTaGTGGCCTCATGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATSLAWW*WPHGAS
Trigger: TGAGGCGCCATGAGGCCATCACCACCATGCAAGGGA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCAGGTGAGAACAGTATaGGCTGTGAATTTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVQVRTV*AVNFCV
Trigger: AACACAGAAATTCACAGCTCATACTGTTCTCACCTG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGGTTTCAGGACCTTCTaGACCACCCTTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSGFRTF*TTLEGV
Trigger: CACACCCTCAAGGGTGGTTCAGAAGGTCCTGAAACC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCCTCTGCCCAAATCATaGCTCAGTCCTGGTACCACG +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSPLPKS*LSPGTT
Trigger: CGTGGTACCAGGACTGAGTCATGATTTGGGCAGAGG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAGTAGCAAGGGGCACTaGTGTCATCTATTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEASSKGH*CHLFSG
Trigger: CCCAGAAAATAGATGACATCAGTGCCCCTTGCTACT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAGCAATAGTGAGGACTaGGAAAGTAGCAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSNSED*ESSKGH
Trigger: GTGCCCCTTGCTACTTTCTCAGTCCTCACTATTGCT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGAACTGTTGGAGTAAATaGGTTATGGAAAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQNCWSK*VMEKPQ
Trigger: TTGTGGCTTTTCCATAACTCATTTACTCCAACAGTT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCCCTGGCGCGTGAAATaGAATTGGTGGGCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSPWRVK*NWWAFL
Trigger: TAGGAAGGCCCACCAATTTCATTTCACGCGCCAGGG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGATAAACCCCCTGGCTaGGGCAATCCTACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSDKPPG*GNPTGC
Trigger: ACAGCCAGTAGGATTGCCTCAGCCAGGGGGTTTATC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCCACAACCCGGATCCTaGTACCGCGGCGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQPQPGS*YRGAAI
Trigger: GATGGCGGCGCCGCGGTAGCAGGATCCGGGTTGTGG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGCTGCTGCCCCTCACTaGCCGAGGGCAGAAACCGTC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGAAAPH*PRAETV
Trigger: GACGGTTTCTGCCCTCGGGCAGTGAGGGGCAGCAGC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCCTTACGGCCTTCTTTaGGACTCCCCGAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGPYGLL*DSPNPG
Trigger: CCCCGGGTTCGGGGAGTCGCAAAGAAGGCCGTAAGG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATGGCTCCTTCATTaGCATCTGGATATGATTCTT +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVGWLLH*HLDMIL
Trigger: AAGAATCATATCCAGATGGCAATGAAGGAGCCATCC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCAGCGGACAGGGTGCTaGTCACGCTCTGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGQRTGC*SRSVAL
Trigger: CAGGGCCACAGAGCGTGAGCAGCACCCTGTCCGCTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACAGCGGACAGGGTGCTaGTCACGCTCTGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGQRTGC*SRSVAL
Trigger: CAGGGCCACAGAGCGTGAGCAGCACCCTGTCCGCTG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCACGAGGAAGGTCAGTaGTCATGCGCTCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGHEEGQ*SCALAG
Trigger: GCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCTGGAGTGTGGCCTCTaGCATGTTCACACGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHALECGL*HVHTGL
Trigger: CAGACCCGTGTGAACATGGCAGAGGCCACACTCCAG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCATCCAGGAAATCCGTaGTATTTGAGTTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGHPGNP*YLSSHR
Trigger: CCGATGAGAACTCAAATAGCACGGATTTCCTGGATG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCAAACCAGTGGCCATTaGCTAAGGAGGCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAQTSGH*LRRLGE
Trigger: CTCCCCGAGCCTCCTTAGGCAATGGCCACTGGTTTG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCAGGCTGCCAAGGTATTaGTGGCGACTCTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSRLPRY*WRLSCL
Trigger: CAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGACCCTTGAGGGTGTGTaGCAGCAAATACCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKTLEGV*QQIPQV
Trigger: CACTTGAGGTATTTGCTGGCACACACCCTCAAGGGT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCCTCCTCCTTTCCACTaGTTTAACCAAACCTTAATG +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVPPPFH*FNQTLM
Trigger: CATTAAGGTTTGGTTAAAGCAGTGGAAAGGAGGAGG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGAAGTGCCAAAAACTTTaGTGTCATTGGGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVKCQKL*CHWGWS
Trigger: TGACCATCCCCAATGACACCAAAGTTTTTGGCACTT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTCGTATAGGGTAAGGTaGTGCACGTATGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSYRVR*CTYAKA
Trigger: CGCCTTTGCATACGTGCACCACCTTACCCTATACGA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTTTTGGGGTGTAGGCTaGTCTGCAGGTGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKFWGVG*SAGVKV
Trigger: GACCTTTACACCTGCAGACCAGCCTACACCCCAAAA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTGCTTTGATAAGTTTTaGGGTGTAGGCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGCFDKF*GVGWSA
Trigger: TGCAGACCAGCCTACACCCCAAAACTTATCAAAGCA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTTGCTCCGGACCACCTaGGGGCTCAATGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHALLRTT*GLNGTV
Trigger: CACAGTACCATTGAGCCCCCAGGTGGTCCGGAGCAA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCTGTCTCACCCAGTTCTaGAGGACTGATGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGCLTQF*RTDACL
Trigger: CAGGCAAGCATCAGTCCTCCAGAACTGGGTGAGACA...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCTCCTGTCTGAGCTGGTaGACGCTACACTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSSCLSW*TLHCSR
Trigger: ACGTGAGCAGTGTAGCGTCCACCAGCTCAGACAGGA...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGGATCCTGTCTGAGCTaGTGGACGCTACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSGSCLS*WTLHCS
Trigger: TGAGCAGTGTAGCGTCCACCAGCTCAGACAGGATCC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTTGATCTGTGTGCGGTaGTCTGCCAGGCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGLICVR*SARRGT
Trigger: GGTGCCCCGCCTGGCAGACCACCGCACACAGATCAA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGGGGTGGCTGGTCCCTaGAGATTCCTGCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAGVAGP*RFLHVV
Trigger: CACTACATGCAGGAATCTCCAGGGACCAGCCACCCC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGCTTCCCTTCTGCCCTaGCTGCCAGTCCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSASLLP*LPVLRK
Trigger: TTTTCTGAGGACTGGCAGCCAGGGCAGAAGGGAAGC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCTGTCTACAAACCAGTaGCCATTGCCTAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKLSTNQ*PLPKEA
Trigger: AGCCTCCTTAGGCAATGGCCACTGGTTTGTAGACAG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACGTACTACAGGCCGATaGGCAGGCCGGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGRTTGR*AGRASA
Trigger: TGCTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAGAAGAGAAGCTGGCTaGCTCCATGATGACCTCGAT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKRREAG*LHDDLD
Trigger: ATCGAGGTCATCATGGAGCCAGCCAGCTTCTCTTCT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATTGCTTTATTGTGGGTaGAGCAGCTGCTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEALLYCG*SSCCRI
Trigger: GATTCTGCAGCAGCTGCTCCACCCACAATAAAGCAA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCTCTCTGAGGCCTCATaGACGCCAAGGCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQLSEAS*TPRPQA
Trigger: GGCCTGCGGCCTTGGCGTTCATGAGGCCTCAGAGAG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACTACGTCAGGGGCGCTaGTCATATTTCCAGATATAT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEALRQGR*SYFQIY
Trigger: ATATATCTGGAAATATGATCAGCGCCCCTGACGTAG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGACTCTTCCTCTTTGGTaGAGGCCACTACGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHATLPLW*RPLRQG
Trigger: CCCCTGACGTAGTGGCCTTCACCAAAGAGGAAGAGT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGGTCTTGATGTTCAATaGTGGACTTCTCCACACTGG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKGLDVQ*WTSPHW
Trigger: CCAGTGTGGAGAAGTCCATCATTGAACATCAAGACC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATGCTTCAGCAGGTCTTaGTGTTCAATGATGGACTTC +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEACFSRS*CSMMDF
Trigger: GAAGTCCATCATTGAACATCAAGACCTGCTGAAGCA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTACCACTGGAGTGACGTaGTGCAAGCCCTCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATTTGVT*CKPSSV
Trigger: GACCGAAGAGGGCTTGCATCACGTCACTCCAGTGGT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGAGGGAACCACTGGAGTaGCGTGATGCAAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAREPLE*RDASPL
Trigger: AAGAGGGCTTGCATCACGTCACTCCAGTGGTTCCCT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCGGTACAGAGAACCAATaGGATGTAGGCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGGTENQ*DVGSTI
Trigger: GATGGTGCTGCCTACATCTCATTGGTTCTCTGTACC...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATTCAGTTCCCCGGAGTaGAGGGGGCATAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGFSSPE*RGHREG
Trigger: CCCCTCCCTATGCCCCCTTCACTCCGGGGAACTGAA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTACTGTTTTCAACCACTaGAGCAAAGAAGGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGTVFNH*SKEGKG
Trigger: GCCTTTACCTTCTTTGCTTCAGTGGTTGAAAACAGT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGTTTTCACTGCAACCTTaGAGGTGGCATTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVFSLQP*RWHLSQ
Trigger: TTGAGATAAATGCCACCTTCAAGGTTGCAGTGAAAA...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCTATGTGTTTGGCATTaGCTCTGGTTAACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGLCVWH*LWLTLV
Trigger: CACAAGAGTTAACCAGAGTCAATGCCAAACACATAG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGGCCGCAGGCCCAACTaGCCTTCTCTTCTTCGTCCG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGGRRPN*PSLLRP
Trigger: CGGACGAAGAAGAGAAGGGCAGTTGGGCCTGCGGCC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACATCCAGGAAATCCGTaGTATTTGAGTTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAHPGNP*YLSSHR
Trigger: CCGATGAGAACTCAAATAGCACGGATTTCCTGGATG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCTCCACCAGGGGTCTCTaGCTCCTTGATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSSTRGL*LLDEKR
Trigger: TCTCTTCTCATCAAGGAGGCAGAGACCCCTGGTGGA...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCTTCCCCCAAAGGCCTTaGACACCTTCTGATAAACCC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGFPQRP*TPSDKP
Trigger: GGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAA...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCGCCAGCTGCACTCCTaGACCAGCCGCTGCAACGAC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQRQLHS*TSRCND
Trigger: GTCGTTGCAGCGGCTGGTGCAGGAGTGCAGCTGGCG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCACACACGCGCCAGCTaGACTCCTGCACCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQHTRAS*TPAPAA
Trigger: AGCGGCTGGTGCAGGAGTGCAGCTGGCGCGTGTGTG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCTGGTGTCATTGGGGATaGTCAGTAAGGGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSWCHWG*SVRVGV
Trigger: GACCCCAACCCTTACTGACCATCCCCAATGACACCA...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAAAAGCCTTTGTCGTTaGCTTTCTTCTGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAKSLCR*LSSGSP
Trigger: CGGAGATCCAGAAGAAAGCCAACGACAAAGGCTTTT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACTCTATCAATCTGACTaGTCAGGAGGTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEALYQSD*SGGNTG
Trigger: ACCTGTGTTACCTCCTGACCAGTCAGATTGATAGAG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGAGTGTGTGTGGGCTaGAGTGGAGGGCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATRVCVG*SGGQHQ
Trigger: TTGGTGCTGCCCTCCACTCCAGCCCACACACACTCT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGGATCCTGTCTGAGCTaGTGGACGCTACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAGSCLS*WTLHCS
Trigger: TGAGCAGTGTAGCGTCCACCAGCTCAGACAGGATCC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTTTAGGAAGCTCATCTaGCGGCTGGCTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAFRKLI*RLATSS
Trigger: GGAGCTGGTAGCCAGCCGCCAGATGAGCTTCCTAAA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCTTGGTCACAGTGTCTaGGACCGACCTCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKLGHSV*DRPQIL
Trigger: TAAAATCTGAGGTCGGTCCCAGACACTGTGACCAAG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTGTGGGAGCTGGAGTGTaGCCTCTGCCATGTTCACAC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATVGAGV*PLPCSH
Trigger: GTGTGAACATGGCAGAGGCCACACTCCAGCTCCCAC...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCTTGCAAAGGTTTATGTaGGTGGGAGCTGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGLQRFM*VGAGVW
Trigger: CCACACTCCAGCTCCCACCCACATAAACCTTTGCAA...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCCCAACAAGCAGTGCTaGGCCTGGGCGGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQPNKQC*AWAVGH
Trigger: ATGCCCCACCGCCCAGGCCCAGCACTGCTTGTTGGG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGTTCCATCACAGTTTTaGGGCAAAGCCAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKVPSQF*GKARKL
Trigger: CAGCTTTCTGGCTTTGCCCCAAAACTGTGATGGAAC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTTCCTCCGGAGCTCTCTaGGGCCTCATGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGSSGAL*GLMNAK
Trigger: CTTGGCGTTCATGAGGCCTCAGAGAGCTCCGGAGGA...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCTTCCGATGAGGGTATaGGCGGATCTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATLPMRV*ADLLQQ
Trigger: CTGCTGAAGCAGATCCGCTCATACCCTCATCGGAAG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGTTCCTGCTCCATCTTaGTCAACACAGACTCCACAC +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSVPAPS*STQTPH
Trigger: GTGTGGAGTCTGTGTTGATCAAGATGGAGCAGGAAC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCCAGTTCTGGAGGACTaGTGCTTGCCTGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGPVLED*CLPGSG
Trigger: TCCGCTTCCAGGCAAGCATCAGTCCTCCAGAACTGG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCGTTGGCATTTTCCACTaGAAAGTCTACACGGAACCC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGVGIFH*KVYTEP
Trigger: GGGTTCCGTGTAGACTTTTCAGTGGAAAATGCCAAC...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCAGTCACGAGTTTCCTaGCTATGGCCTCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAQSRVS*LWPHLP
Trigger: GGGAAGATGAGGCCATAGTCAGGAAACTCGTGACTG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGGGAACCACTGGAGTaGCGTGATGCAAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATREPLE*RDASPL
Trigger: AAGAGGGCTTGCATCACGTCACTCCAGTGGTTCCCT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGCAGCACTAGATGCTaGCCCAACAAGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATSSTRC*PNKQCW
Trigger: CCAGCACTGCTTGTTGGGTCAGCATCTAGTGCTGCT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCTGCTGCAGAATCTGTaGGTTGACTCACCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHALLQNL*VDSPVP
Trigger: AGGGACTGGTGAGTCAACTCACAGATTCTGCAGCAG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTTTTCACTGCAACCTTaGAGGTGGCATTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: PLPKEARGGQGITISGIGFSLQP*RWHLSQ
Trigger: TTGAGATAAATGCCACCTTCAAGGTTGCAGTGAAAA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGGTTGGGGTCCCACCTaGTCAGAGAACTCGGAAATA +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAGWGPT*SENSEI
Trigger: TATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAACC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAGCTCCTGGAACTGCTaGATGATTTTATGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSSWNC*MILCWS
Trigger: AGACCAGCATAAAATCATGCAGCAGTTCCAGGAGCT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTGTTAGAGGTAGTGGATaGCTGGCTGGCCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATVRGSG*LAGLIL
Trigger: CAGGATCAGGCCAGCCAGGCATCCACTACCTCTAAC...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCCTGGGGGTCGAAACTaGTCAACTCAGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAPGGRN*STQSLP
Trigger: TGGAAGTGACTGAGTTGAGCAGTTTCGACCCCCAGG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCTGGTACTGTGAGGCTTaGCTGGCTGTCAGATTTAGA +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGWYCEA*LAVRFR
Trigger: TCTAAATCTGACAGCCAGGCAAGCCTCACAGTACCA...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATCGTGGGTAGGCAGGTaGAGGTGGTGGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGSWVGR*RWWQKV
Trigger: CACCTTCTGCCACCACCTGCACCTGCCTACCCACGA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCACCCTCGTTCATTTTaGCACTCAAGTGTCCGGCAA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSHPRSF*HSSVRQ
Trigger: TTGCCGGACACTTGAGTGGCAAAATGAACGAGGGTG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTGGCTGCTCCTCCCTTaGATGGTGGTGATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGWLLLP*MVVMAS
Trigger: TGAGGCCATCACCACCATGCAAGGGAGGAGCAGCCA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTTCACATTTAAAGGCTaGCAAGGTATTGCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKFTFKG*QGIAGD
Trigger: GTCGCCAGCAATACCTTGGCAGCCTTTAAATGTGAA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCTGCAATTCAGGATCTaGCCCAAACTCATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSLQFRI*PKLISP
Trigger: AGGGCTGATGAGTTTGGGGCAGATCCTGAATTGCAG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGAGTTTTCGCTCTTGTTaGCCAGGGTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHASFRSC*PGWSAV
Trigger: CACTGCACTCCACCCTGGGCAACAAGAGCGAAAACT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTATGGTCAGTAAGGGTTaGGGTCCCACCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATMVSKG*GPTCSE
Trigger: CTCTGAGCAGGTGGGACCCCAACCCTTACTGACCAT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTGGTGTCATTGGGGATaGTCAGTAAGGGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAWCHWG*SVRVGV
Trigger: GACCCCAACCCTTACTGACCATCCCCAATGACACCA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGCAGATCCAGGAGGATaGCCCACGAAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGADPGG*PTKEAW
Trigger: CCAGGCTTCCTTCGTGGGCCATCCTCCTGGATCTGC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCATTCTTCTAGAGAACTaGAAGGCGGCCTGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGILLEN*KAACLD
Trigger: GTCAAGACAGGCCGCCTTCCAGTTCTCTAGAAGAAT...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGACACAGACTCCACACTaGACTTGTAAGAACCAACAC +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKTQTPH*TCKNQH
Trigger: GTGTTGGTTCTTACAAGTCCAGTGTGGAGTCTGTGT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGTGGGAGCTGGAGTGTaGCCTCTGCCATGTTCACAC +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGVGAGV*PLPCSH
Trigger: GTGTGAACATGGCAGAGGCCACACTCCAGCTCCCAC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTATGTGGGTGGGAGCTaGAGTGTGGCCTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGYVGGS*SVASAM
Trigger: CATGGCAGAGGCCACACTCCAGCTCCCACCCACATA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCTGTCTACAAACCAGTaGCCATTGCCTAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSLSTNQ*PLPKEA
Trigger: AGCCTCCTTAGGCAATGGCCACTGGTTTGTAGACAG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCAGAAGAGAAGCTGGCTaGCTCCATGATGACCTCGAT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSRREAG*LHDDLD
Trigger: ATCGAGGTCATCATGGAGCCAGCCAGCTTCTCTTCT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTGCTTGCCACTTACATaGCTGCCCCTGAGACGGTCT +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATCLPLT*LPLRRS
Trigger: AGACCGTCTCAGGGGCAGCCATGTAAGTGGCAAGCA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTCCTCCGGAGCTCTCTaGGGCCTCATGAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQSSGAL*GLMNAK
Trigger: CTTGGCGTTCATGAGGCCTCAGAGAGCTCCGGAGGA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATGTGTTCAATGTGGCTaGGCTGAGCCAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGCVQCG*AEPGSG
Trigger: CCCAGACCCTGGCTCAGCTCAGCCACATTGAACACA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGAAGGCGGCCTGTCTTaGCTGGGCTTAGAGGGTATG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGEGGLS*LGLEGM
Trigger: CATACCCTCTAAGCCCAGTCAAGACAGGCCGCCTTC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCGGAGGAGTCTATTTGTaGTGGGGTGTTTTCTATGCT +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGGGVYL*WGVFYA
Trigger: AGCATAGAAAACACCCCATCACAAATAGACTCCTCC...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGGGGTACTGGCGGATaGATTTTAAGGCGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATRGTGG*ILRRSG
Trigger: GCCAGAACGCCTTAAAATTCATCCGCCAGTACCCCT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAGTCACGAGTTTCCTaGCTATGGCCTCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATQSRVS*LWPHLP
Trigger: GGGAAGATGAGGCCATAGTCAGGAAACTCGTGACTG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGGACATAGTCAAACCTaGGCATGGGGTGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGGHSQT*AWGGWS
Trigger: GGACCAGCCACCCCATGCTCAGGTTTGACTATGTCC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAAAAGAGTATGGGGAGTaGGTCCCAAGGCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGKEYGE*VPRPAH
Trigger: GTGAGCGGGCCTTGGGACTCACTCCCCATACTCTTT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGCCCACGAGACCCAGTaGGAGGTAGTGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGAHETQ*EVVKWL
Trigger: CAACCACTTCACTACCTCTCACTGGGTCTCGTGGGC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACGACTCTCCTGTCTGTaGACATGCGCAACGGGCACA +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGRLSCL*TCATGT
Trigger: TGTGCCCGTTGCGCATGTTCACAGACAGGAGAGTCG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAGTGGTGGTGCCAGTaGTCACTTTCTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATQWWCQ*SLSDLP
Trigger: AGGAAGGTCAGAAAGTGATCACTGGCACCACCACTG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGGTTTCAGGACCTTCTaGACCACCCTTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGGFRTF*TTLEGV
Trigger: CACACCCTCAAGGGTGGTTCAGAAGGTCCTGAAACC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGCGCCCGGCCTCAACTaGAAATTCTTGATGAGATTA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSAPGLN*KFLMRL
Trigger: TAATCTCATCAAGAATTTTCAGTTGAGGCCGGGCGC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGGACTGGAGAAAAAGCTaGCACAAAACTCAAGACAAC +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKDWRKS*HKTQDN
Trigger: GTTGTCTTGAGTTTTGTGTCAGCTTTTTCTCCAGTC...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGAGGCCAGATGGGGAATaGAAGGTAAGGTACTGTGGT +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHARPDGE*KVRYCG
Trigger: ACCACAGTACCTTACCTTTCATTCCCCATCTGGCCT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAAGGTGGTGCACGTATaGAAAGGCGCCCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATKVVHV*KGALLR
Trigger: TCTAAGGAGGGCGCCTTTGCATACGTGCACCACCTT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCAGAGATATAAGCCATaGAAAACGGCCTCACGAAGC +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSQRYKP*KTASRS
Trigger: GCTTCGTGAGGCCGTTTTGCATGGCTTATATCTCTG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATATCAGTGGGATAGGTaGTGGCGGAACCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGYQWDR*WRNQGV
Trigger: CACCCCCTGGTTCCGCCAGCACCTATCCCACTGATA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGAGGGAGACCAGCCCTaGTTGCCACTTACATGGCTG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGEGDQP*LPLTWL
Trigger: CAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCCCTC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCTTCCCAGTGTTAACTaGCTCTGCCCAAATCATGAC +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSLPSVN*LCPNHD
Trigger: GTCATGATTTGGGCAGAGGCAGTTAACACTGGGAAG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCAATCCTACTGGCTGTaGAGACAAAGATGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSQSYWL*RQRCDS
Trigger: GCTGTCACATCTTTGTCTGCACAGCCAGTAGGATTG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCAGTCCCTACAGTTCTaGTACCAAAGTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGQSLQF*YQSGLQ
Trigger: TTGAAGACCACTTTGGTAGCAGAACTGTAGGGACTG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGACGGGACGGGAACATaGAGTAATAAAATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEADGTGT*SNKIAF
Trigger: AAAAGCTATTTTATTACTGCATGTTCCCGTCCCGTC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCCACGAAGTTCAGCTTaGGGTAGGCAGATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGPRSSA*GRQIQE
Trigger: CTCCTGGATCTGCCTACCCCAAGCTGAACTTCGTGG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCTCCCAGCACCACCTTaGAGTCCTCCACGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGLPAPP*SPPRSS
Trigger: TGAACTTCGTGGAGGACTCCAAGGTGGTGCTGGGAG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCTCGTTGGCTTTCTTCTaGATCTCCGTTTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGSLAFF*ISVSVC
Trigger: ACACACAGAAACGGAGATCCAGAAGAAAGCCAACGA...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCTGGACTTCTCCACACTaGCCAGTTCATTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSWTSPH*PVHWLS
Trigger: AGAAAGCCAATGAACTGGCCAGTGTGGAGAAGTCCA...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCACTGTGAGGCTTGCCTaGCTGTCAGATTTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSTVRLA*LSDLES
Trigger: GCTTTCTAAATCTGACAGCCAGGCAAGCCTCACAGT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACACCTGGGGGCTCAATaGTACTGTGAGGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGHLGAQ*YCEACL
Trigger: CAGGCAAGCCTCACAGTACCATTGAGCCCCCAGGTG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCACCTGGGGGCTCAATaGTACTGTGAGGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGHLGAQ*YCEACL
Trigger: CAGGCAAGCCTCACAGTACCATTGAGCCCCCAGGTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCAGGGAGTAGATGGCTaGGTGGGCAAAGGGGTACTG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGQGVDG*VGKGVL
Trigger: CAGTACCCCTTTGCCCACCCAGCCATCTACTCCCTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATCTGTCTCCTTGTCGTaGGTAGGCAGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGSVSLS*VGRCRW
Trigger: CCACCTGCACCTGCCTACCCACGACAAGGAGACAGA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGCTCAGCCAGGTACTaGACCACCCTAACATCCTCA +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATSSARY*TTLTSS
Trigger: TGAGGATGTTAGGGTGGTCCAGTACCTGGCTGAGCT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAAACCTGAGCATGGGGTaGCTGGTCCCTGGAGATTCC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGNLSMG*LVPGDS
Trigger: GGAATCTCCAGGGACCAGCCACCCCATGCTCAGGTT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGCTTCCCTTCTGCCCTaGCTGCCAGTCCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGASLLP*LPVLRK
Trigger: TTTTCTGAGGACTGGCAGCCAGGGCAGAAGGGAAGC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCTCCAGCCCCCAAGGTaGTCCTCACCATTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGLQPPR*SSPLAL
Trigger: CAAAGCCAATGGTGAGGACCACCTTGGGGGCTGGAG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTGTGAATTTCTGTGTTaGTGTGACAGGAATGCCACA +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKCEFLC*CDRNAT
Trigger: TGTGGCATTCCTGTCACACCAACACAGAAATTCACA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCATCATGACTCAGTCCTaGTACCACGTCAAGATCCCT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSIMTQS*YHVKIP
Trigger: AGGGATCTTGACGTGGTACCAGGACTGAGTCATGAT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAAGGTAAAGGCCAGATaGGGAATGAAAGGTAAGGTA +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKKVKAR*GMKGKV
Trigger: TACCTTACCTTTCATTCCCCATCTGGCCTTTACCTT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACTGCACCTCACGTGGTaGCGGGGACTCACATTCACA +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGLHLTW*RGLTFT
Trigger: TGTGAATGTGAGTCCCCGCCACCACGTGAGGTGCAG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGAAGGCGGCCTGTCTTaGCTGGGCTTAGAGGGTATG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQEGGLS*LGLEGM
Trigger: CATACCCTCTAAGCCCAGTCAAGACAGGCCGCCTTC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCGGAGGAGTCTATTTGTaGTGGGGTGTTTTCTATGCT +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSGGVYL*WGVFYA
Trigger: AGCATAGAAAACACCCCATCACAAATAGACTCCTCC...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGTAGCTGGTGGTGTCTaGGTAGTTGTCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGVAGGV*VVVQAG
Trigger: ACCAGCCTGGACAACTACTCAGACACCACCAGCTAC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTAGTGTCCGGCAATGCTaGATACAGCCAGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGSVRQC*IQPVCS
Trigger: GGAGCACACTGGCTGTATTCAGCATTGCCGGACACT...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGCCCACGAGACCCAGTaGGAGGTAGTGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQAHETQ*EVVKWL
Trigger: CAACCACTTCACTACCTCTCACTGGGTCTCGTGGGC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACCTCTGCCCAAATCATaGCTCAGTCCTGGTACCACG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGPLPKS*LSPGTT
Trigger: CGTGGTACCAGGACTGAGTCATGATTTGGGCAGAGG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGTTCTACCAAAGGAGTaGGGTTCCTGGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGVLPKE*GSWGNR
Trigger: CCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAAC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAACTGTTGGAGTAAATaGGTTATGGAAAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LSSPKGLAHLLINPLAEANCWSK*VMEKPQ
Trigger: TTGTGGCTTTTCCATAACTCATTTACTCCAACAGTT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTAGCAGCACTAGATGCTaGCCCAACAAGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGSSTRC*PNKQCW
Trigger: CCAGCACTGCTTGTTGGGTCAGCATCTAGTGCTGCT...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTGCAGAATCTGTGAGTTaGCTCACCAGTCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATAESVS*LTSPYS
Trigger: ACTGTAGGGACTGGTGAGTCAACTCACAGATTCTGC...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATGCTGCGAAATCACCTaGACTCTCCGGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGCCEIT*TLRNPL
Trigger: CAGTGGGTTCCGGAGAGTGCAGGTGATTTCGCAGCA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCCAGCACAAGAAACCTaGTGCGAAATCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATPAQET*CEITCT
Trigger: AGTGCAGGTGATTTCGCAGCAGGTTTCTTGTGCTGG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCAGAGATATAAGCCATaGAAAACGGCCTCACGAAGC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAQRYKP*KTASRS
Trigger: GCTTCGTGAGGCCGTTTTGCATGGCTTATATCTCTG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAGGTGGATTTCTCCGTaGCCAAAACTTCAATACTTT +
Preference number: 4 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKRWISP*PKLQYF
Trigger: AAAGTATTGAAGTTTTGGGCACGGAGAAATCCACCT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGACAAAGATAGCCAGTaGAGTCACGAGTTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHADKDSQ*SHEFPD
Trigger: GTCAGGAAACTCGTGACTGCACTGGCTATCTTTGTC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGGGGAGGCCACTCTCTaGAAGCCAATAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGGEATL*KPISFH
Trigger: GTGGAAGCTTATTGGCTTGCAGAGAGTGGCCTCCCC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATGTCAAGGTCCAGGATaGTCGTGTAGCGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGCQGPG*SCSGCS
Trigger: GCTACAGCCGCTACACGAGCATCCTGGACCTTGACA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTGTAGGCAGCACCATCTaGCACAAAAGGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATVGSTI*HKRFSI
Trigger: GATGGAGAACCTTTTGTGGCAGATGGTGCTGCCTAC...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGGTCTGTTCTGTTCATaGCCCAGCAGCCTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGGLFCS*PSSLLP
Trigger: AGGCAAAAGGCTGCTGGGGCATGAACAGAACAGACC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCAGGAAAACTTAGTTTaGCCAGCCTTGTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAQENLV*PALSAE
Trigger: CTCAGCTGACAAGGCTGGGCAAACTAAGTTTTCCTG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTGTGGGTGGAGCAGCTaGTGCAGAATCTGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGCGWSS*CRICEL
Trigger: CAACTCACAGATTCTGCAGCAGCTGCTCCACCCACA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAATGGTCAGTAAGGGTTaGGGTCCCACCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGMVSKG*GPTCSE
Trigger: CTCTGAGCAGGTGGGACCCCAACCCTTACTGACCAT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGATTCTTCTAGAGAACTaGAAGGCGGCCTGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAILLEN*KAACLD
Trigger: GTCAAGACAGGCCGCCTTCCAGTTCTCTAGAAGAAT...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTTGCTCCGGACCACCTaGGGGCTCAATGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQLLRTT*GLNGTV
Trigger: CACAGTACCATTGAGCCCCCAGGTGGTCCGGAGCAA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGGACTGATGCTTGCCTaGAAGCGGATGGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGGLMLA*KRMAPS
Trigger: TGAAGGAGCCATCCGCTTCCAGGCAAGCATCAGTCC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTGCTCACGTAGCTGGTaGTGTCTGAGTAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATCSRSW*CLSSCP
Trigger: TGGACAACTACTCAGACACCACCAGCTACGTGAGCA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTCTGTCTCCTTGTCGTaGGTAGGCAGGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQSVSLS*VGRCRW
Trigger: CCACCTGCACCTGCCTACCCACGACAAGGAGACAGA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGCTTGGTCACAGTGTCTaGGACCGACCTCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHALGHSV*DRPQIL
Trigger: TAAAATCTGAGGTCGGTCCCAGACACTGTGACCAAG...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCAAGGAGGGAACCACTaGAGTGACGTGATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGQGGNH*SDVMQA
Trigger: GGCTTGCATCACGTCACTCCAGTGGTTCCCTCCTTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCTGTGAATTTCTGTGTTaGTGTGACAGGAATGCCACA +
Preference number: 4 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGCEFLC*CDRNAT
Trigger: TGTGGCATTCCTGTCACACCAACACAGAAATTCACA...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp GTAACAGACGTTTCACATTTAAAGGCTGCCAAGGTATaGCTGGCGACTCTCCTGTCTGTGAACATGCGCAAC +
Preference number: 4 (lower is better)
Translates to: VTDVSHLKAAKV*LATLLSVNMRN
Trigger: GTTGCGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGTGAAACGTCTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCTTCCGATGAGGGTATaGGCGGATCTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQLPMRV*ADLLQQ
Trigger: CTGCTGAAGCAGATCCGCTCATACCCTCATCGGAAG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCCCTTCAACTTCCGATaGGGGTATGAGCGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQPFNFR*GYERIC
Trigger: GCAGATCCGCTCATACCCTCATCGGAAGTTGAAGGG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGTAGCAAGGGGCACTaGTGTCATCTATTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATSSKGH*CHLFSG
Trigger: CCCAGAAAATAGATGACATCAGTGCCCCTTGCTACT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGTTCTACCAAAGGAGTaGGGTTCCTGGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGVLPKE*GSWGNR
Trigger: CCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAAC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCTATGTGTTTGGCATTaGCTCTGGTTAACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSLCVWH*LWLTLV
Trigger: CACAAGAGTTAACCAGAGTCAATGCCAAACACATAG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTTATAGGGTAAGGTGGTaGACGTATGCAAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGYRVRW*TYAKAP
Trigger: GGGCGCCTTTGCATACGTGCACCACCTTACCCTATA...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGGGTGTTTTCTATGCTaGCTTCCTCTGTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGGCFLC*LPLSHP
Trigger: TGGGTGAGACAGAGGAAGGCAGCATAGAAAACACCC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGCCACGTGGGAACCATaGTGCCAGACACCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQATWEP*CQTPET
Trigger: AGTTTCTGGTGTCTGGCAGCATGGTTCCCACGTGGC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATCCACCAGGGGTCTCTaGCTCCTTGATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGSTRGL*LLDEKR
Trigger: TCTCTTCTCATCAAGGAGGCAGAGACCCCTGGTGGA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGGTCTGTTCTGTTCATaGCCCAGCAGCCTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGGLFCS*PSSLLP
Trigger: AGGCAAAAGGCTGCTGGGGCATGAACAGAACAGACC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTAGTTTTCGCTCTTGTTaGCCAGGGTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGSFRSC*PGWSAV
Trigger: CACTGCACTCCACCCTGGGCAACAAGAGCGAAAACT...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCTGTGTAGCACTGTCCTaGTGTAATCCAAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSCVALS*CNPSLS
Trigger: TGAAAGACTTGGATTACACCAGGACAGTGCTACACA...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTAAAGGTTTATGTGGGTaGGAGCTGGAGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGKGLCG*ELECGL
Trigger: GAGGCCACACTCCAGCTCCCACCCACATAAACCTTT...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGGGATCACTATCAGTaGGATAGGTGCTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQGDHYQ*DRCWRN
Trigger: GTTCCGCCAGCACCTATCCCACTGATAGTGATCCCC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCTTAAAACGAGGACTTaGACAAGGAGGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATLKTRT*TRREPL
Trigger: CAGTGGTTCCCTCCTTGTCCAAGTCCTCGTTTTAAG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTACCAGTTTCAGTACCTaGGCCCTCAAAGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATTSFST*ALKAIV
Trigger: CACTATTGCTTTGAGGGCCCAGGTACTGAAACTGGT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGCGTTTGCTTTATTGTaGGTGGAGCAGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGAFALL*VEQLLQ
Trigger: CTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTTCTGGAAAATTCGGCTaGAAGCTCCTGGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGSGKFG*KLLELL
Trigger: CAGCAGTTCCAGGAGCTTTCAGCCGAATTTTCCAGA...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGAATGAAGAACCACCTTaGGGGAGACCAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQNEEPP*GRPALL
Trigger: AAGCAGGGCTGGTCTCCCTCAAGGTGGTTCTTCATT...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACCCAGCCTTGTCAGCTaGGATTGGTTTTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGPSLVS*DWFCFP
Trigger: TGGAAAGCAAAACCAATCTCAGCTGACAAGGCTGGG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCCTCCACTCTTGGGCTaGATAAGCACTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQPPLLG*ISTPKK
Trigger: CTTCTTGGGAGTGCTTATTCAGCCCAAGAGTGGAGG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGGGTGTTTTCTATGCTaGCTTCCTCTGTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGGCFLC*LPLSHP
Trigger: TGGGTGAGACAGAGGAAGGCAGCATAGAAAACACCC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACCAGCCCTCTTTTTATaGCTATCGGAAGACAGGCCA +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGPALFL*LSEDRP
Trigger: TGGCCTGTCTTCCGATAGGCATAAAAAGAGGGCTGG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCACCCTCGTTCATTTTaGCACTCAAGTGTCCGGCAA +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGHPRSF*HSSVRQ
Trigger: TTGCCGGACACTTGAGTGGCAAAATGAACGAGGGTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAACTAAACAGAACCGTTaGTGTCCCAAGCCCACGAGA +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGTKQNR*CPKPTR
Trigger: TCTCGTGGGCTTGGGACAGCAACGGTTCTGTTTAGT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCAATCCTACTGGCTGTaGAGACAAAGATGTGACAGC +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGQSYWL*RQRCDS
Trigger: GCTGTCACATCTTTGTCTGCACAGCCAGTAGGATTG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAAAAGCCTTTGTCGTTaGCTTTCTTCTGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATKSLCR*LSSGSP
Trigger: CGGAGATCCAGAAGAAAGCCAACGACAAAGGCTTTT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCACTGCTCACGTAGCTaGTGGTGTCTGAGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGHCSRS*WCLSSC
Trigger: ACAACTACTCAGACACCACCAGCTACGTGAGCAGTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACTAGAAGGCCAAGTGTaGCTGCAATTCAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGLEGQV*LQFRIC
Trigger: GCAGATCCTGAATTGCAGCCACACTTGGCCTTCTAG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGTTCCATCACAGTTTTaGGGCAAAGCCAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGVPSQF*GKARKL
Trigger: CAGCTTTCTGGCTTTGCCCCAAAACTGTGATGGAAC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGCGTTTGCTTTATTGTaGGTGGAGCAGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQAFALL*VEQLLQ
Trigger: CTGCAGCAGCTGCTCCACCCACAATAAAGCAAACGC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCTACGTCAGGGGCGCTaGTCATATTTCCAGATATAT +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGLRQGR*SYFQIY
Trigger: ATATATCTGGAAATATGATCAGCGCCCCTGACGTAG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGCAGGGAGAAGTAATTaGGATCAAAAGTGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAAGRSN*DQKCQK
Trigger: TTTTTGGCACTTTTGATCTCAATTACTTCTCCCTGC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGGTCTTGATGTTCAATaGTGGACTTCTCCACACTGG +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGGLDVQ*WTSPHW
Trigger: CCAGTGTGGAGAAGTCCATCATTGAACATCAAGACC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGTTGGCATTTTCCACTaGAAAGTCTACACGGAACCC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGVGIFH*KVYTEP
Trigger: GGGTTCCGTGTAGACTTTTCAGTGGAAAATGCCAAC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTCATCTCCCAGTTCCTaGTCCATCTTGATCAACACA +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGSSPSS*SILINT
Trigger: TGTGTTGATCAAGATGGAGCAGGAACTGGGAGATGA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGACAAAGATAGCCAGTaGAGTCACGAGTTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGDKDSQ*SHEFPD
Trigger: GTCAGGAAACTCGTGACTGCACTGGCTATCTTTGTC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGACTAAACAGAACCGTTaGTGTCCCAAGCCCACGAGA +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQTKQNR*CPKPTR
Trigger: TCTCGTGGGCTTGGGACAGCAACGGTTCTGTTTAGT...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGTAGGCAGCACCATCTaGCACAAAAGGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQVGSTI*HKRFSI
Trigger: GATGGAGAACCTTTTGTGGCAGATGGTGCTGCCTAC...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCAGCACTCAGAAGCTCTaGAAAATTCGGCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGSTQKL*KIRLKA
Trigger: AGCTTTCAGCCGAATTTTCCAGAGCTTCTGAGTGCT...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATGGACTTCTCCACACTaGCCAGTTCATTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGWTSPH*PVHWLS
Trigger: AGAAAGCCAATGAACTGGCCAGTGTGGAGAAGTCCA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTTTTGGGGTGTAGGCTaGTCTGCAGGTGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQFWGVG*SAGVKV
Trigger: GACCTTTACACCTGCAGACCAGCCTACACCCCAAAA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTTCATTAATGGCACTTaGGTAGCTGGCCTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATFINGT*VAGLKV
Trigger: GACTTTAAGGCCAGCTACCCAAGTGCCATTAATGAA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGGTAATCCACAGACATaGTACGCAGGGAGAAGTAAT +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGGNPQT*YAGRSN
Trigger: ATTACTTCTCCCTGCGTATCATGTCTGTGGATTACC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCAGGTGAGAACAGTATaGGCTGTGAATTTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGQVRTV*AVNFCV
Trigger: AACACAGAAATTCACAGCTCATACTGTTCTCACCTG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGGATGGCTCCTTCATTaGCATCTGGATATGATTCTT +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGGWLLH*HLDMIL
Trigger: AAGAATCATATCCAGATGGCAATGAAGGAGCCATCC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAAGTGTTAACTGCCTCTaGCCAAATCATGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGSVNCL*PNHDSV
Trigger: GACTGAGTCATGATTTGGGCAGAGGCAGTTAACACT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCAATTAACCAGCCAGTaGGAAAACGAATCAGCATCT +
Preference number: 4 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGQLTSQ*ENESAS
Trigger: AGATGCTGATTCGTTTTCTCACTGGCTGGTTAATTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCACGTCAAGATCCCTTTaGAAGGAAACATACTTTGCA +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGTSRSL*KETYFA
Trigger: TGCAAAGTATGTTTCCTTTCAAAGGGATCTTGACGT...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGACTGGAGAAAAAGCTaGCACAAAACTCAAGACAAC +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGDWRKS*HKTQDN
Trigger: GTTGTCTTGAGTTTTGTGTCAGCTTTTTCTCCAGTC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCTAAAGTGGGGCTTTTaGAAATCACCAGTCCACAAC +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQLKWGF*KSPVHN
Trigger: GTTGTGGACTGGTGATTTTCAAAAGCCCCACTTTAG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGATTTTATGCTGGTCTaGAGAGATATAAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGDFMLV*RDISHA
Trigger: TGCATGGCTTATATCTCTGCAGACCAGCATAAAATC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCACACTTGGTGGACTTTaGTTTGATAAGTTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGTLGGL*FDKFWG
Trigger: ACCCCAAAACTTATCAAAGCAAAGTCCACCAAGTGT...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGAGCACTCAGAAGCTCTaGAAAATTCGGCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQSTQKL*KIRLKA
Trigger: AGCTTTCAGCCGAATTTTCCAGAGCTTCTGAGTGCT...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR TCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGCAGGGAGAAGTAATTaGGATCAAAAGTGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGAGRSN*DQKCQK
Trigger: TTTTTGGCACTTTTGATCTCAATTACTTCTCCCTGC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAAGGTGGATTTCTCCGTaGCCAAAACTTCAATACTTT +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGRWISP*PKLQYF
Trigger: AAAGTATTGAAGTTTTGGGCACGGAGAAATCCACCT...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGCCTCCTCCTTTCCACTaGTTTAACCAAACCTTAATG +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQPPPFH*FNQTLM
Trigger: CATTAAGGTTTGGTTAAAGCAGTGGAAAGGAGGAGG...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR GCA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGAGACGGGACGGGAACATaGAGTAATAAAATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGDGTGT*SNKIAF
Trigger: AAAAGCTATTTTATTACTGCATGTTCCCGTCCCGTC...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CCA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTGTGTAGCACTGTCCTaGTGTAATCCAAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQCVALS*CNPSLS
Trigger: TGAAAGACTTGGATTACACCAGGACAGTGCTACACA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp AATTCATCACATAGGATTATGCTTTTCACTGCAACCTaGAAGGTGGCATTTATCTCAATCTGTGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: NSSHRIMLFTAT*KVAFISICDSS
Trigger: GCTGGAGTCACAGATTGAGATAAATGCCACCTTCAAGGTTGCAGTGAAAAGCATAATCCTATGTGATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
3UTR CAA 72 bp CTTAAAAAGTACACTTCTCATACTATGTGTTTGGCATaGACTCTGGTTAACTCTTGTGCAGCAACACCTACG +
Preference number: 4 (lower is better)
Translates to: LKKYTSHTMCLA*TLVNSCAATPT
Trigger: CGTAGGTGTTGCTGCACAAGAGTTAACCAGAGTCAATGCCAAACACATAGTATGAGAAGTGTACTTTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp GCTACGGGACGCCGCAGGGGTCAGCCAAGCGCTGCTGCCCCTCACTaGCCGAGGGCAGAAACCGTCGCGGCTCCTAGGACGCCACAACCC +
Preference number: 5 (lower is better)
Translates to: ATGRRRGQPSAAAPH*PRAETVAAPRTPQP
Trigger: GGGTTGTGGCGTCCTAGGAGCCGCGACGGTTTCTGCCCTCGGGCAGTGAGGGGCAGCAGCGCTTGGCTGACCCCTGCGGCGTCCCGTAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACTCTCCCAGCACCACCTaGGAGTCCTCCACGAAGTTC +
Preference number: 5 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHSPSTT*ESSTKF
Trigger: GAACTTCGTGGAGGACTCCAAGGTGGTGCTGGGAGA...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp GCGGTGTTAATCGACGCGCAGAAGGCAGGCCTCCGGAGAAGGAAGTaGAGCCCTTACGGCCTTCTTTGCGACTCCCCGAACCCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: AVLIDAQKAGLRRRK*SPYGLLCDSPNPGS
Trigger: GGACCCCGGGTTCGGGGAGTCGCAAAGAAGGCCGTAAGGGCTTCACTTCCTTCTCCGGAGGCCTGCCTTCTGCGCGTCGATTAACACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACAGGTGGTCCTCACCATaGGCTTTGGTCACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHRWSSP*ALVTCA
Trigger: GGCACAAGTGACCAAAGCCAATGGTGAGGACCACCT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATCCTCTTCGGTCACTCTaGGCTTCCACCAGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHPLRSL*ASTRGL
Trigger: GAGACCCCTGGTGGAAGCCAAGAGTGACCGAAGAGG...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp AGCCCCCTCACAGTTGTAGCTCCTCCGGAGCTCTCTGAGGCCTCATaGACGCCAAGGCCGCAGGCCCAACTGCCCTTCTCTTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: SPLTVVAPPELSEAS*TPRPQAQLPFSSSS
Trigger: GGACGAAGAAGAGAAGGGCAGTTGGGCCTGCGGCCTTGGCGTTCATGAGGCCTCAGAGAGCTCCGGAGGAGCTACAACTGTGAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCTGTGGCTGACTGCTTaGCTCCGGACCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PLPKEARGGQGITISGIGLWLTA*LRTTWG
Trigger: CCCCCAGGTGGTCCGGAGCAAAGCAGTCAGCCACAG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp GCCCTTCTCTTCTTCGTCCGGCGAGCGCGGCCAGCACAAGAAACCTaGTGCGAAATCACCTGCACTCTCCGGAACCCACTGCGACAGCAA +
Preference number: 5 (lower is better)
Translates to: ALLFFVRRARPAQET*CEITCTLRNPLRQQ
Trigger: TTGCTGTCGCAGTGGGTTCCGGAGAGTGCAGGTGATTTCGCAGCAGGTTTCTTGTGCTGGCCGCGCTCGCCGGACGAAGAAGAGAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp GGCCTCACGAAGCCACGGGCCTCCAGGTCGTATAGGGTAAGGTGGTaGACGTATGCAAAGGCGCCCTCCTTAGAATCTCCCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: GLTKPRASRSYRVRW*TYAKAPSLESPSTT
Trigger: GGTGGTGCTGGGAGATTCTAAGGAGGGCGCCTTTGCATACGTGCACCACCTTACCCTATACGACCTGGAGGCCCGTGGCTTCGTGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp CTCTGTAAAGGGGGCAGCGCAGGGTTTTGTTGTCAAGGTCCAGGATaGTCGTGTAGCGGCTGTAGCGGCTCAGGGCATGGAGGGTACCGG +
Preference number: 5 (lower is better)
Translates to: LCKGGSAGFCCQGPG*SCSGCSGSGHGGYR
Trigger: CCGGTACCCTCCATGCCCTGAGCCGCTACAGCCGCTACACGAGCATCCTGGACCTTGACAACAAAACCCTGCGCTGCCCCCTTTACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACTGTGGCTGACTGCTTaGCTCCGGACCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEALWLTA*LRTTWG
Trigger: CCCCCAGGTGGTCCGGAGCAAAGCAGTCAGCCACAG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGCAGCGCAGGGTTTTGTaGTCAAGGTCCAGGATGCTC +
Preference number: 5 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQQRRVL*SRSRML
Trigger: GAGCATCCTGGACCTTGACAACAAAACCCTGCGCTG...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTCTGGCTGCTCCTCCCTaGCATGGTGGTGATGGCCTC +
Preference number: 5 (lower is better)
Translates to: PLPKEARGGQGITISGIGLAAPP*HGGDGL
Trigger: GAGGCCATCACCACCATGCAAGGGAGGAGCAGCCAG...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp AACGGCCTCACGAAGCCACGGGCCTCCAGGTCGTATAGGGTAAGGTaGTGCACGTATGCAAAGGCGCCCTCCTTAGAATCTCCCAGCACC +
Preference number: 5 (lower is better)
Translates to: NGLTKPRASRSYRVR*CTYAKAPSLESPST
Trigger: GGTGCTGGGAGATTCTAAGGAGGGCGCCTTTGCATACGTGCACCACCTTACCCTATACGACCTGGAGGCCCGTGGCTTCGTGAGGCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACTCATACTCTTCCTCTTaGGTGAAGGCCACTACGTCA +
Preference number: 5 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHSYSSS*VKATTS
Trigger: TGACGTAGTGGCCTTCACCAAAGAGGAAGAGTATGA...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACTGGCTGCTCCTCCCTaGCATGGTGGTGATGGCCTC +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEALAAPP*HGGDGL
Trigger: GAGGCCATCACCACCATGCAAGGGAGGAGCAGCCAG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAGGAGACCAGCCCTGCTaGCCACTTACATGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAGDQPC*PLTWLP
Trigger: GGGCAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCC...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTTCTCCCAGCACCACCTaGGAGTCCTCCACGAAGTTC +
Preference number: 5 (lower is better)
Translates to: PLPKEARGGQGITISGIGSPSTT*ESSTKF
Trigger: GAACTTCGTGGAGGACTCCAAGGTGGTGCTGGGAGA...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTGGAAGGCGGCCTGTCTaGACTGGGCTTAGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: PLPKEARGGQGITISGIGGRRPV*TGLRGY
Trigger: ATACCCTCTAAGCCCAGTCAAGACAGGCCGCCTTCC...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAGCTCCTCTGTCTCCTaGTCGTGGGTAGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEASSSVS*SWVGRC
Trigger: GCACCTGCCTACCCACGACAAGGAGACAGAGGAGCT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTACAAACCAGTGGCCATaGCCTAAGGAGGCTCGGGGA +
Preference number: 5 (lower is better)
Translates to: PLPKEARGGQGITISGIGTNQWP*PKEARG
Trigger: TCCCCGAGCCTCCTTAGGCAATGGCCACTGGTTTGT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp CACAAGAAACCTGCTGCGAAATCACCTGCACTCTCCGGAACCCACTaGGACAGCAAAAGCCCCCGCTCTGAACAAGGCTTAACGCGAGGC +
Preference number: 5 (lower is better)
Translates to: HKKPAAKSPALSGTH*DSKSPRSEQGLTRG
Trigger: GCCTCGCGTTAAGCCTTGTTCAGAGCGGGGGCTTTTGCTGTCGCAGTGGGTTCCGGAGAGTGCAGGTGATTTCGCAGCAGGTTTCTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp TCCTCGCTGATGGTCCTGTGGCTGACTGCTTTGCTCCGGACCACCTaGGGGCTCAATGGTACTGTGAGGCTTGCCTGGCTGTCAGATTTA +
Preference number: 5 (lower is better)
Translates to: SSLMVLWLTALLRTT*GLNGTVRLAWLSDL
Trigger: TAAATCTGACAGCCAGGCAAGCCTCACAGTACCATTGAGCCCCCAGGTGGTCCGGAGCAAAGCAGTCAGCCACAGGACCATCAGCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp CGGAAGACAGGCCAGCAGGATAAGCAGAGGGGATCCTGTCTGAGCTaGTGGACGCTACACTGCTCACGTAGCTGGTGGTGTCTGAGTAGT +
Preference number: 5 (lower is better)
Translates to: RKTGQQDKQRGSCLS*WTLHCSRSWWCLSS
Trigger: ACTACTCAGACACCACCAGCTACGTGAGCAGTGTAGCGTCCACCAGCTCAGACAGGATCCCCTCTGCTTATCCTGCTGGCCTGTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp ACATCCTCATTCACCAGACCCAGGGTCAGCTTTAGGAAGCTCATCTaGCGGCTGGCTACCAGCTCCTCTGTCTCCTTGTCGTGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: TSSFTRPRVSFRKLI*RLATSSSVSLSWVG
Trigger: GCCTACCCACGACAAGGAGACAGAGGAGCTGGTAGCCAGCCGCCAGATGAGCTTCCTAAAGCTGACCCTGGGTCTGGTGAATGAGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCCCTTACGGCCTTCTTaGCGACTCCCCGAACCCGGG +
Preference number: 5 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSPLRPS*RLPEPG
Trigger: CCCGGGTTCGGGGAGTCGCAAAGAAGGCCGTAAGGG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACAAGGTCTTCAACTTCTaGTCAAAACACTTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHKVFNF*SKHLVD
Trigger: GTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTT...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGAGCTCCTCTGTCTCCTaGTCGTGGGTAGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSSSVS*SWVGRC
Trigger: GCACCTGCCTACCCACGACAAGGAGACAGAGGAGCT...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAGCTCAGGCAACTGTTaGGTCATGCCAACCCCTCCC +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEASSGNC*VMPTPP
Trigger: GGGAGGGGTTGGCATGACCAAACAGTTGCCTGAGCT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGATTGGCTTTGGTCACTaGTGCCCGCTTCACACTAGG +
Preference number: 5 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVIGFGH*CPLHTR
Trigger: CCTAGTGTGAAGCGGGCACAAGTGACCAAAGCCAAT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAACAAACCAGTGGCCATaGCCTAAGGAGGCTCGGGGA +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEATNQWP*PKEARG
Trigger: TCCCCGAGCCTCCTTAGGCAATGGCCACTGGTTTGT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGCCTCTTCGGTCACTCTaGGCTTCCACCAGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKPLRSL*ASTRGL
Trigger: GAGACCCCTGGTGGAAGCCAAGAGTGACCGAAGAGG...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp ACTGAGGACTTCAATACTGTCCTCGCTGATGGTCCTGTGGCTGACTaGTTTGCTCCGGACCACCTGGGGGCTCAATGGTACTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: TEDFNTVLADGPVAD*FAPDHLGAQWYCEA
Trigger: AGCCTCACAGTACCATTGAGCCCCCAGGTGGTCCGGAGCAAAGCAGTCAGCCACAGGACCATCAGCGAGGACAGTATTGAAGTCCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp CACGGGCTTAGCGTAGCAGCCATAGCTGGGGACAAAGATAGCCAGTaGAGTCACGAGTTTCCTGACTATGGCCTCATCTTCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: HGLSVAAIAGDKDSQ*SHEFPDYGLIFPQD
Trigger: GTCCTGGGGGAAGATGAGGCCATAGTCAGGAAACTCGTGACTGCACTGGCTATCTTTGTCCCCAGCTATGGCTGCTACGCTAAGCCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTTAGTTTGCCCAGCCTaGTCAGCTGAGATTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHLVCPA*SAEIGF
Trigger: AAAACCAATCTCAGCTGACAAGGCTGGGCAAACTAA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCACGAGGAAGGTCAGTGCTCATGCGCTCTGGCCGGCAGGAGCCAGTGGGCCACTCTCATACTATGTGTTaGGCATTGACTCTGGTTAAC +
Preference number: 5 (lower is better)
Translates to: PRGRSVLMRSGRQEPVGHSHTMC*ALTLVN
Trigger: GTTAACCAGAGTCAATGCCAAACACATAGTATGAGA...GTGGCCCACTGGCTCCTGCCGGCCAGAGCGCATGAGCACTGACCTTCCTCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp GTAAAGGTCTGTGTCGGCAGACTCATCAGGGTTAGAGGTAGTGGATaGCTGGCTGGCCTGATCCTGGATGTGCTCCATCTCACCAGGACA +
Preference number: 5 (lower is better)
Translates to: VKVCVGRLIRVRGSG*LAGLILDVLHLTRT
Trigger: TGTCCTGGTGAGATGGAGCACATCCAGGATCAGGCCAGCCAGGCATCCACTACCTCTAACCCTGATGAGTCTGCCGACACAGACCTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp AAGACAGGCCAGCAGGATAAGCAGAGGGGATCCTGTCTGAGCTGGTaGACGCTACACTGCTCACGTAGCTGGTGGTGTCTGAGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: KTGQQDKQRGSCLSW*TLHCSRSWWCLSSC
Trigger: ACAACTACTCAGACACCACCAGCTACGTGAGCAGTGTAGCGTCCACCAGCTCAGACAGGATCCCCTCTGCTTATCCTGCTGGCCTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp AAAGCTGGGGACATAGTCAAACCTGAGCATGGGGTGGCTGGTCCCTaGAGATTCCTGCATGTAGTGCAGCTTCAGCAGCTCAGCCAGGTA +
Preference number: 5 (lower is better)
Translates to: KAGDIVKPEHGVAGP*RFLHVVQLQQLSQV
Trigger: TACCTGGCTGAGCTGCTGAAGCTGCACTACATGCAGGAATCTCCAGGGACCAGCCACCCCATGCTCAGGTTTGACTATGTCCCCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGCGGATGGCTCCTTCATaGCCATCTGGATATGATTCT +
Preference number: 5 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVRMAPS*PSGYDS
Trigger: AGAATCATATCCAGATGGCAATGAAGGAGCCATCCG...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCATCACCCTCGTTCATTTaGCCACTCAAGTGTCCGGCA +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEASPSFI*PLKCPA
Trigger: TGCCGGACACTTGAGTGGCAAAATGAACGAGGGTGA...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGAGGTAGTGAAGTGGTaGCAAAGGTTTATGTGGGTG +
Preference number: 5 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVEVVKW*QRFMWV
Trigger: CACCCACATAAACCTTTGCAACCACTTCACTACCTC...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp CCCTTCACAACTGTTGTCTCGGGAAGAAGGGTTGGCATTTTCCACTaGAAAGTCTACACGGAACCCCTGGTCCTTCTGCCTGTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: PFTTVVSGRRVGIFH*KVYTEPLVLLPVAL
Trigger: CAGCGCCACAGGCAGAAGGACCAGGGGTTCCGTGTAGACTTTTCAGTGGAAAATGCCAACCCTTCTTCCCGAGACAACAGTTGTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTAGAGGGTATGCTTTCTaGTTTCTCCACCATCCTGTC +
Preference number: 5 (lower is better)
Translates to: PLPKEARGGQGITISGIGRGYAF*FLHHPV
Trigger: GACAGGATGGTGGAGAAACAAGAAAGCATACCCTCT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCAGCTCAGGCAACTGTTaGGTCATGCCAACCCCTCCC +
Preference number: 5 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSSSGNC*VMPTPP
Trigger: GGGAGGGGTTGGCATGACCAAACAGTTGCCTGAGCT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCAGGTGGTCCTCACCATaGGCTTTGGTCACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGRWSSP*ALVTCA
Trigger: GGCACAAGTGACCAAAGCCAATGGTGAGGACCACCT...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCAAGGCTGCCAAGGTATaGCTGGCGACTCTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGKAAKV*LATLLS
Trigger: AGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTT...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCCAGTTTTCGCTCTTGTaGCCCAGGGTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGQFSLL*PRVECS
Trigger: ACTGCACTCCACCCTGGGCAACAAGAGCGAAAACTG...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCCATGATGACCTCGATGGCGTACTACAGGCCGATGGGCAGGCCGGGCCTCAGAATGGGACTTGTCATTaGTGTGAGGTTGAAATCTAC +
Preference number: 5 (lower is better)
Translates to: LHDDLDGVLQADGQAGPQNGTCH*CEVEIY
Trigger: GTAGATTTCAACCTCACACAAATGACAAGTCCCATT...CTGAGGCCCGGCCTGCCCATCGGCCTGTAGTACGCCATCGAGGTCATCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp CCGGCAGGGGAGGCCACTCTCTGCAAGCCAATAAGCTTCCACTTCTaGAAATCCATAATGTGCAAAGGGGAGGAGGCCCAATGTTTCACG +
Preference number: 5 (lower is better)
Translates to: PAGEATLCKPISFHF*KSIMCKGEEAQCFT
Trigger: CGTGAAACATTGGGCCTCCTCCCCTTTGCACATTATGGATTTTCAGAAGTGGAAGCTTATTGGCTTGCAGAGAGTGGCCTCCCCTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACCCTTACGGCCTTCTTaGCGACTCCCCGAACCCGGG +
Preference number: 5 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGPLRPS*RLPEPG
Trigger: CCCGGGTTCGGGGAGTCGCAAAGAAGGCCGTAAGGG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGGGATAGGTAAAGTGCCAAAAACTTaGGTGTCATTGGGGATGGTC +
Preference number: 5 (lower is better)
Translates to: PLPKEARGGQGITISGIGKVPKT*VSLGMV
Trigger: GACCATCCCCAATGACACCAAAGTTTTTGGCACTTT...ACCTATCCCACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TCCTGCACCAGCCGCTGCAACGACTGCACCTCACGTGGTGGCGGGGACTCACATTTCTTGTCAAAACACTaGGTGGACTTTGCTTTGATA +
Preference number: 5 (lower is better)
Translates to: SCTSRCNDCTSRGGGDSHFLSKH*VDFALI
Trigger: TATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAA...ATGTGAGTCCCCGCCACCACGTGAGGTGCAGTCGTTGCAGCGGCTGGTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAGAGGGTATGCTTTCTaGTTTCTCCACCATCCTGTC +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEARGYAF*FLHHPV
Trigger: GACAGGATGGTGGAGAAACAAGAAAGCATACCCTCT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGGAGACCAGCCCTGCTaGCCACTTACATGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGGDQPC*PLTWLP
Trigger: GGGCAGCCATGTAAGTGGCAAGCAGGGCTGGTCTCC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp TGTTTTCTATGCTGCCTTCCTCTGTCTCACCCAGTTCTGGAGGACTaGTGCTTGCCTGGAAGCGGATGGCTCCTTCATTGCCATCTGGAT +
Preference number: 5 (lower is better)
Translates to: CFLCCLPLSHPVLED*CLPGSGWLLHCHLD
Trigger: ATCCAGATGGCAATGAAGGAGCCATCCGCTTCCAGGCAAGCATCAGTCCTCCAGAACTGGGTGAGACAGAGGAAGGCAGCATAGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTCATACTCTTCCTCTTaGGTGAAGGCCACTACGTCA +
Preference number: 5 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSYSSS*VKATTS
Trigger: TGACGTAGTGGCCTTCACCAAAGAGGAAGAGTATGA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTCTCGGGAAGAAGGGTaGGCATTTTCCACTGAAAAG +
Preference number: 5 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKSREEG*AFSTEK
Trigger: CTTTTCAGTGGAAAATGCCAACCCTTCTTCCCGAGA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTGGGCAGCGCAGGGTTTaGTTGTCAAGGTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATGQRRV*LSRSRM
Trigger: CATCCTGGACCTTGACAACAAAACCCTGCGCTGCCC...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCTCACCCTCGTTCATTTaGCCACTCAAGTGTCCGGCA +
Preference number: 5 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSSPSFI*PLKCPA
Trigger: TGCCGGACACTTGAGTGGCAAAATGAACGAGGGTGA...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ACCAGTGGCCATTGCCTAAGGAGGCTCGGGGAGGCCAGGGGATCACTATCAGTGACTATGTGTTTGGCATaGACTCTGGTTAACTCTTGT +
Preference number: 5 (lower is better)
Translates to: TSGHCLRRLGEARGSLSVTMCLA*TLVNSC
Trigger: ACAAGAGTTAACCAGAGTCAATGCCAAACACATAGT...CACTGATAGTGATCCCCTGGCCTCCCCGAGCCTCCTTAGGCAATGGCCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp CTGACCATCGCTCTCCTTCCCAATACAGCAGGAGGAGTCTATTTGTaGTGGGGTGTTTTCTATGCTGCCTTCCTCTGTCTCACCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LTIALLPNTAGGVYL*WGVFYAAFLCLTQF
Trigger: GAACTGGGTGAGACAGAGGAAGGCAGCATAGAAAACACCCCATCACAAATAGACTCCTCCTGCTGTATTGGGAAGGAGAGCGATGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACATTGGCTTTCTCAATaGCCTGAGATGAGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAHWLSQ*PEMSKS
Trigger: GCTTTTACTCATCTCAGGCAATTGAGAAAGCCAATG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGGAAGGCGGCCTGTCTaGACTGGGCTTAGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGGRRPV*TGLRGY
Trigger: ATACCCTCTAAGCCCAGTCAAGACAGGCCGCCTTCC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACACGTCAAGATCCCTTaGAAAGGAAACATACTTTGC +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEAHVKIP*KGNILC
Trigger: GCAAAGTATGTTTCCTTTCAAAGGGATCTTGACGTG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCCCTTGTCAGCTGAGATaGGTTTTGCTTTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSPCQLR*VLLSSQ
Trigger: CTGGCTGGAAAGCAAAACCAATCTCAGCTGACAAGG...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCTGCAGAATCTGTGAGTaGACTCACCAGTCCCTACAG +
Preference number: 5 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSCRICE*THQSLQ
Trigger: CTGTAGGGACTGGTGAGTCAACTCACAGATTCTGCA...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTCGGCGTTTGCTTTATaGTGGGTGGAGCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATSAFAL*WVEQLL
Trigger: CAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCACTTTTCACTGCAACCTaGAAGGTGGCATTTATCTCA +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEALFTAT*KVAFIS
Trigger: TGAGATAAATGCCACCTTCAAGGTTGCAGTGAAAAG...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTGGGCAGCGCAGGGTTTaGTTGTCAAGGTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGGQRRV*LSRSRM
Trigger: CATCCTGGACCTTGACAACAAAACCCTGCGCTGCCC...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTATTGGCTTTGGTCACTaGTGCCCGCTTCACACTAGG +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATIGFGH*CPLHTR
Trigger: CCTAGTGTGAAGCGGGCACAAGTGACCAAAGCCAAT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTTCCCAGTTTCAAACTaGTCCTCAGAAGGGGGACTC +
Preference number: 5 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAFPVSN*SSEGGL
Trigger: GAGTCCCCCTTCTGAGGACAAGTTTGAAACTGGGAA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCCTTCTGAACCACCCTaGAGGGTGTGTGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGPSEPP*RVCASK
Trigger: TTTGCTGGCACACACCCTCAAGGGTGGTTCAGAAGG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGGCGCGTGAAATGAAATaGGTGGGCCTTCCTAGGATT +
Preference number: 5 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHAAREMK*VGLPRI
Trigger: AATCCTAGGAAGGCCCACCAATTTCATTTCACGCGC...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCCTAGCCTGTCGGCGTTaGCTTTATTGTGGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGLACRR*LYCGWS
Trigger: GCTCCACCCACAATAAAGCAAACGCCGACAGGCTAG...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAACTATGTGTTTGGCATaGACTCTGGTTAACTCTTGT +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEATMCLA*TLVNSC
Trigger: ACAAGAGTTAACCAGAGTCAATGCCAAACACATAGT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp CCTGTTGCCAGTCTTCAAGCACTCAGAAGCTCTGGAAAATTCGGCTaGAAGCTCCTGGAACTGCTGCATGATTTTATGCTGGTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PVASLQALRSSGKFG*KLLELLHDFMLVCR
Trigger: TCTGCAGACCAGCATAAAATCATGCAGCAGTTCCAGGAGCTTTCAGCCGAATTTTCCAGAGCTTCTGAGTGCTTGAAGACTGGCAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp CTCACCAGGACACAAATCATGCCCCTTCAACTTCCGATGAGGGTATaGGCGGATCTGCTTCAGCAGGTCTTGATGTTCAATGATGGACTT +
Preference number: 5 (lower is better)
Translates to: LTRTQIMPLQLPMRV*ADLLQQVLMFNDGL
Trigger: AAGTCCATCATTGAACATCAAGACCTGCTGAAGCAGATCCGCTCATACCCTCATCGGAAGTTGAAGGGGCATGATTTGTGTCCTGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp TTAGGAATTGGGCATTCTTCTAGAGAACTGGAAGGCGGCCTGTCTTaGCTGGGCTTAGAGGGTATGCTTTCTTGTTTCTCCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: LGIGHSSRELEGGLS*LGLEGMLSCFSTIL
Trigger: CAGGATGGTGGAGAAACAAGAAAGCATACCCTCTAAGCCCAGTCAAGACAGGCCGCCTTCCAGTTCTCTAGAAGAATGCCCAATTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCAAGGTCTTCAACTTCTaGTCAAAACACTTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGKVFNF*SKHLVD
Trigger: GTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTT...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCAGCGCAGGGTTTTGTaGTCAAGGTCCAGGATGCTC +
Preference number: 5 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGQRRVL*SRSRML
Trigger: GAGCATCCTGGACCTTGACAACAAAACCCTGCGCTG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCCTTCTGAACCACCCTaGAGGGTGTGTGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGPSEPP*RVCASK
Trigger: TTTGCTGGCACACACCCTCAAGGGTGGTTCAGAAGG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGACAGTTTTCGCTCTTGTaGCCCAGGGTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGQFSLL*PRVECS
Trigger: ACTGCACTCCACCCTGGGCAACAAGAGCGAAAACTG...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTGCGCGTGAAATGAAATaGGTGGGCCTTCCTAGGATT +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATAREMK*VGLPRI
Trigger: AATCCTAGGAAGGCCCACCAATTTCATTTCACGCGC...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTCAGTTCCCCCAAAGGCCTTGCACACCTTCTGATAAACCCCCTGGCTGAGGCAAGAAAGCTGACTTGTTaGCTTCAAAACACAAACCAA +
Preference number: 5 (lower is better)
Translates to: LSSPKGLAHLLINPLAEARKLTC*LQNTNQ
Trigger: TTGGTTTGTGTTTTGAAGCAAACAAGTCAGCTTTCT...TGCCTCAGCCAGGGGGTTTATCAGAAGGTGTGCAAGGCCTTTGGGGGAACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTGCAGAATCTGTGAGTaGACTCACCAGTCCCTACAG +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATCRICE*THQSLQ
Trigger: CTGTAGGGACTGGTGAGTCAACTCACAGATTCTGCA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCTAGCCTGTCGGCGTTaGCTTTATTGTGGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGLACRR*LYCGWS
Trigger: GCTCCACCCACAATAAAGCAAACGCCGACAGGCTAG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp GATGAGGGTATGAGCGGATCTGCTTCAGCAGGTCTTGATGTTCAATaGTGGACTTCTCCACACTGGCCAGTTCATTGGCTTTCTCAATTG +
Preference number: 5 (lower is better)
Translates to: DEGMSGSASAGLDVQ*WTSPHWPVHWLSQL
Trigger: CAATTGAGAAAGCCAATGAACTGGCCAGTGTGGAGAAGTCCATCATTGAACATCAAGACCTGCTGAAGCAGATCCGCTCATACCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp AAAGTGCCAAAAACTTTGGTGTCATTGGGGATGGTCAGTAAGGGTTaGGGTCCCACCTGCTCAGAGAACTCGGAAATAAGAATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: KVPKTLVSLGMVSKG*GPTCSENSEIRMKS
Trigger: GGACTTCATTCTTATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAACCCTTACTGACCATCCCCAATGACACCAAAGTTTTTGGCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp GTTGCTGTCCCAAGCCCACGAGACCCAGTGAGAGGTAGTGAAGTGGTTGCAAAGTTCTTGTCAAAACACTaGGTGGACTTTGCTTTGATA +
Preference number: 5 (lower is better)
Translates to: VAVPSPRDPVRGSEVVAKFLSKH*VDFALI
Trigger: TATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAA...CTTTGCAACCACTTCACTACCTCTCACTGGGTCTCGTGGGCTTGGGACAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAGTTCCTGCTCCATCTaGATCAACACAGACTCCACA +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATSSCSI*INTDST
Trigger: TGTGGAGTCTGTGTTGATCAAGATGGAGCAGGAACT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCGGATGGCTCCTTCATaGCCATCTGGATATGATTCT +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATRMAPS*PSGYDS
Trigger: AGAATCATATCCAGATGGCAATGAAGGAGCCATCCG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCAACCCTTCACAACTGTaGTCTCGGGAAGAAGGGTTG +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGNPSQL*SREEGL
Trigger: CAACCCTTCTTCCCGAGACAACAGTTGTGAAGGGTT...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTTCCCAGTTTCAAACTaGTCCTCAGAAGGGGGACTC +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGFPVSN*SSEGGL
Trigger: GAGTCCCCCTTCTGAGGACAAGTTTGAAACTGGGAA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCAAGTGTCCGGCGCCAGAAGTAGAAACTaGATGCTTTTTCCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: HNSYLAVTLVHFATQVSGARSRN*MLFPFC
Trigger: GCAAAAAGGAAAAAGCATCAAGTTTCTACTTCTGGC...GCCGGACACTTGAGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTCGGCGTTTGCTTTATaGTGGGTGGAGCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQSAFAL*WVEQLL
Trigger: CAGCAGCTGCTCCACCCACAATAAAGCAAACGCCGA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp CTTCTCCACACTGGCCAGTTCATTGGCTTTCTCAATTGCCTGAGATaGGTAAAAGCCTTTGTCGTTGGCTTTCTTCTGGATCTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LLHTGQFIGFLNCLR*VKAFVVGFLLDLRF
Trigger: GAAACGGAGATCCAGAAGAAAGCCAACGACAAAGGCTTTTACTCATCTCAGGCAATTGAGAAAGCCAATGAACTGGCCAGTGTGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 90 bp ATTTCCAGATATATGAAGAAAACATTGAGAGGAAGTGGGAAAGAATaGGGTGTTAATCGACGCGCAGAAGGCAGGCCTCCGGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: ISRYMKKTLRGSGKE*GVNRRAEGRPPEKE
Trigger: TTCCTTCTCCGGAGGCCTGCCTTCTGCGCGTCGATTAACACCGCATTCTTTCCCACTTCCTCTCAATGTTTTCTTCATATATCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp CATTGGCTTTCTCAATTGCCTGAGATGAGTAAAAGCCTTTGTCGTTaGCTTTCTTCTGGATCTCCGTTTCTGTGTGTAGCACTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: HWLSQLPEMSKSLCR*LSSGSPFLCVALSW
Trigger: CCAGGACAGTGCTACACACAGAAACGGAGATCCAGAAGAAAGCCAACGACAAAGGCTTTTACTCATCTCAGGCAATTGAGAAAGCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 90 bp CAACTTCTTGTCAAAACACTTGGTGGACTTTGCTTTGATAAGTTTTaGGGTGTAGGCTGGTCTGCAGGTGTAAAGGTCTGTGTCGGCAGA +
Preference number: 5 (lower is better)
Translates to: QLLVKTLGGLCFDKF*GVGWSAGVKVCVGR
Trigger: TCTGCCGACACAGACCTTTACACCTGCAGACCAGCCTACACCCCAAAACTTATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCAGTTCCTGCTCCATCTaGATCAACACAGACTCCACA +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGSSCSI*INTDST
Trigger: TGTGGAGTCTGTGTTGATCAAGATGGAGCAGGAACT...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTCTCGGGAAGAAGGGTaGGCATTTTCCACTGAAAAG +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGSREEG*AFSTEK
Trigger: CTTTTCAGTGGAAAATGCCAACCCTTCTTCCCGAGA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCCTTGTCAGCTGAGATaGGTTTTGCTTTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGPCQLR*VLLSSQ
Trigger: CTGGCTGGAAAGCAAAACCAATCTCAGCTGACAAGG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGAACCCTTCACAACTGTaGTCTCGGGAAGAAGGGTTG +
Preference number: 5 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQNPSQL*SREEGL
Trigger: CAACCCTTCTTCCCGAGACAACAGTTGTGAAGGGTT...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTCACGTCAAGATCCCTTaGAAAGGAAACATACTTTGC +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATHVKIP*KGNILC
Trigger: GCAAAGTATGTTTCCTTTCAAAGGGATCTTGACGTG...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp AGAGGGAGCCAGGCTCCACTTCTGCCCATGTCCAACTTAAAAACTACTAGGAGCAGAAAGCTGACTTGTTaGCTTCAAAACACAAACCAA +
Preference number: 5 (lower is better)
Translates to: RGSQAPLLPMSNLKTTRSRKLTC*LQNTNQ
Trigger: TTGGTTTGTGTTTTGAAGCAAACAAGTCAGCTTTCT...GCTCCTAGTAGTTTTTAAGTTGGACATGGGCAGAAGTGGAGCCTGGCTCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ACATTTAAAGGCTGCCAAGGTATTGCTGGCGACTCTCCTGTCTGTGAACATGCGTCTCATACTATGTGTTaGGCATTGACTCTGGTTAAC +
Preference number: 5 (lower is better)
Translates to: TFKGCQGIAGDSPVCEHASHTMC*ALTLVN
Trigger: GTTAACCAGAGTCAATGCCAAACACATAGTATGAGA...CGCATGTTCACAGACAGGAGAGTCGCCAGCAATACCTTGGCAGCCTTTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTTTCTCAGATAAAATGTaGCACAGTTATGGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATFSDKM*HSYGLG
Trigger: TCCAAGGCCATAACTGTGCAACATTTTATCTGAGAA...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCTCTAAAGTGGGGCTTTaGAAAATCACCAGTCCACAA +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGSKVGL*KITSPQ
Trigger: TTGTGGACTGGTGATTTTCAAAAGCCCCACTTTAGA...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TTTCCACCAAACCACAACAGTTACCTGGCTGTCACCCTCGTTCATTTTGCCACTAATGGGACTTGTCATTaGTGTGAGGTTGAAATCTAC +
Preference number: 5 (lower is better)
Translates to: FPPNHNSYLAVTLVHFATNGTCH*CEVEIY
Trigger: GTAGATTTCAACCTCACACAAATGACAAGTCCCATT...AGTGGCAAAATGAACGAGGGTGACAGCCAGGTAACTGTTGTGGTTTGGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTTTAGTTTGCCCAGCCTaGTCAGCTGAGATTGGTTTT +
Preference number: 5 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGLVCPA*SAEIGF
Trigger: AAAACCAATCTCAGCTGACAAGGCTGGGCAAACTAA...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 90 bp AGGTGGATTTCTCCGTGCCCAAAACTTCAATACTTTCACCACTGCTaGTACTCCCTTTCATATCCATATCCAGGTAGTCCAAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RWISPCPKLQYFHHC*YSLSYPYPGSPSFP
Trigger: AGGAAAACTTGGACTACCTGGATATGGATATGAAAGGGAGTATCAGCAGTGGTGAAAGTATTGAAGTTTTGGGCACGGAGAAATCCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp TGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGGGAGGTCATTGGCTTTCTCAATaGCCTGAGATGAGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: CLLQNTNQGTVFCAFQGGHWLSQ*PEMSKS
Trigger: GCTTTTACTCATCTCAGGCAATTGAGAAAGCCAATG...ACCTCCCTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATTTCTAAAATCCCAAGGTTCTACCAAAGGAGTGAGGTTCCTGGGGAAACAGGCGCCAGAAGTAGAAACTaGATGCTTTTTCCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: ISKIPRFYQRSEVPGETGARSRN*MLFPFC
Trigger: GCAAAAAGGAAAAAGCATCAAGTTTCTACTTCTGGC...GCCTGTTTCCCCAGGAACCTCACTCCTTTGGTAGAACCTTGGGATTTTAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp ATAGTGAGGACTGAGAAAGTAGCAAGGGGCACTGATGTCATCTATTTTCTGGGATTCTCAGATAAAATGTaGCACAGTTATGGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: IVRTEKVARGTDVIYFLGFSDKM*HSYGLG
Trigger: TCCAAGGCCATAACTGTGCAACATTTTATCTGAGAA...TCCCAGAAAATAGATGACATCAGTGCCCCTTGCTACTTTCTCAGTCCTCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS-3UTR CAA 90 bp CTGACTTGTTTGCTTCAAAACACAAACCAAGGCACTGTCTTCTGTGCTTTTCAGTCTAAAGTGGGGCTTTaGAAAATCACCAGTCCACAA +
Preference number: 5 (lower is better)
Translates to: LTCLLQNTNQGTVFCAFQSKVGL*KITSPQ
Trigger: TTGTGGACTGGTGATTTTCAAAAGCCCCACTTTAGA...CTGAAAAGCACAGAAGACAGTGCCTTGGTTTGTGTTTTGAAGCAAACAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp GGCTACGGGACGCCGCAGGGGTCAGCCAAGCGCTGCTaGCCCTCACTGCCCGAGGGCAGAAACCGTCGCGGC +
Preference number: 6 (lower is better)
Translates to: GYGTPQGSAKRC*PSLPEGRNRRG
Trigger: GCCGCGACGGTTTCTGCCCTCGGGCAGTGAGGGGCAGCAGCGCTTGGCTGACCCCTGCGGCGTCCCGTAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp CGCCGCAGGGGTCAGCCAAGCGCTGCTGCCCCTCACTaGCCGAGGGCAGAAACCGTCGCGGCTCCTAGGACG +
Preference number: 6 (lower is better)
Translates to: RRRGQPSAAAPH*PRAETVAAPRT
Trigger: CGTCCTAGGAGCCGCGACGGTTTCTGCCCTCGGGCAGTGAGGGGCAGCAGCGCTTGGCTGACCCCTGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp GTAGGTGCTGCCCCGCTTGATCTGTGTGCGGTGGTCTaGCAGGCGGGGCACCAGGGTGCCTCTGTAAAGGGG +
Preference number: 6 (lower is better)
Translates to: VGAAPLDLCAVV*QAGHQGASVKG
Trigger: CCCCTTTACAGAGGCACCCTGGTGCCCCGCCTGGCAGACCACCGCACACAGATCAAGCGGGGCAGCACCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp CTCCGGAACCCACTGCGACAGCAAAAGCCCCCGCTCTaGACAAGGCTTAACGCGAGGCTACGGGACGCCGCA +
Preference number: 6 (lower is better)
Translates to: LRNPLRQQKPPL*TRLNARLRDAA
Trigger: TGCGGCGTCCCGTAGCCTCGCGTTAAGCCTTGTTCAGAGCGGGGGCTTTTGCTGTCGCAGTGGGTTCCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp CAGCCCCCTCACAGTTGTAGCTCCTCCGGAGCTCTCTaGGGCCTCATGAACGCCAAGGCCGCAGGCCCAACT +
Preference number: 6 (lower is better)
Translates to: QPPHSCSSSGAL*GLMNAKAAGPT
Trigger: AGTTGGGCCTGCGGCCTTGGCGTTCATGAGGCCTCAGAGAGCTCCGGAGGAGCTACAACTGTGAGGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp TGCTCTGGACATGCAGGTAGTAGGTGCTGCCCCGCTTaGTCTGTGTGCGGTGGTCTGCCAGGCGGGGCACCA +
Preference number: 6 (lower is better)
Translates to: CSGHAGSRCCPA*SVCGGLPGGAP
Trigger: TGGTGCCCCGCCTGGCAGACCACCGCACACAGATCAAGCGGGGCAGCACCTACTACCTGCATGTCCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 90 bp GAAGGCAGGCCTCCGGAGAAGGAAGTGAAGCCCTTACGGCCTTCTTaGCGACTCCCCGAACCCGGGGTCCTAGGCTGCTTCTCACACACC +
Preference number: 6 (lower is better)
Translates to: EGRPPEKEVKPLRPS*RLPEPGVLGCFSHT
Trigger: GGTGTGTGAGAAGCAGCCTAGGACCCCGGGTTCGGGGAGTCGCAAAGAAGGCCGTAAGGGCTTCACTTCCTTCTCCGGAGGCCTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp GGGGGCAGCGCAGGGTTTTGTTGTCAAGGTCCAGGATaGTCGTGTAGCGGCTGTAGCGGCTCAGGGCATGGA +
Preference number: 6 (lower is better)
Translates to: GGSAGFCCQGPG*SCSGCSGSGHG
Trigger: TCCATGCCCTGAGCCGCTACAGCCGCTACACGAGCATCCTGGACCTTGACAACAAAACCCTGCGCTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 72 bp CCTCCGGAGAAGGAAGTGAAGCCCTTACGGCCTTCTTaGCGACTCCCCGAACCCGGGGTCCTAGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: PPEKEVKPLRPS*RLPEPGVLGCF
Trigger: GAAGCAGCCTAGGACCCCGGGTTCGGGGAGTCGCAAAGAAGGCCGTAAGGGCTTCACTTCCTTCTCCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp ACAGTTGTAGCTCCTCCGGAGCTCTCTGAGGCCTCATaGACGCCAAGGCCGCAGGCCCAACTGCCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: TVVAPPELSEAS*TPRPQAQLPFS
Trigger: AGAGAAGGGCAGTTGGGCCTGCGGCCTTGGCGTTCATGAGGCCTCAGAGAGCTCCGGAGGAGCTACAACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp GCGCGGCCAGCACAAGAAACCTGCTGCGAAATCACCTaGACTCTCCGGAACCCACTGCGACAGCAAAAGCCC +
Preference number: 6 (lower is better)
Translates to: ARPAQETCCEIT*TLRNPLRQQKP
Trigger: GGGCTTTTGCTGTCGCAGTGGGTTCCGGAGAGTGCAGGTGATTTCGCAGCAGGTTTCTTGTGCTGGCCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp TTCTTCGTCCGGCGAGCGCGGCCAGCACAAGAAACCTaGTGCGAAATCACCTGCACTCTCCGGAACCCACTG +
Preference number: 6 (lower is better)
Translates to: FFVRRARPAQET*CEITCTLRNPL
Trigger: CAGTGGGTTCCGGAGAGTGCAGGTGATTTCGCAGCAGGTTTCTTGTGCTGGCCGCGCTCGCCGGACGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp CCAGCACCACCTTGGAGTCCTCCACGAAGTTCAGCTTaGGGTAGGCAGATCCAGGAGGATGGCCCACGAAGG +
Preference number: 6 (lower is better)
Translates to: PAPPWSPPRSSA*GRQIQEDGPRR
Trigger: CCTTCGTGGGCCATCCTCCTGGATCTGCCTACCCCAAGCTGAACTTCGTGGAGGACTCCAAGGTGGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp ATGGTCCTGTGGCTGACTGCTTTGCTCCGGACCACCTaGGGGCTCAATGGTACTGTGAGGCTTGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: MVLWLTALLRTT*GLNGTVRLAWL
Trigger: CAGCCAGGCAAGCCTCACAGTACCATTGAGCCCCCAGGTGGTCCGGAGCAAAGCAGTCAGCCACAGGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 90 bp AGGACTTCAATACTGTCCTCGCTGATGGTCCTGTGGCTGACTGCTTaGCTCCGGACCACCTGGGGGCTCAATGGTACTGTGAGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: RTSILSSLMVLWLTA*LRTTWGLNGTVRLA
Trigger: GGCAAGCCTCACAGTACCATTGAGCCCCCAGGTGGTCCGGAGCAAAGCAGTCAGCCACAGGACCATCAGCGAGGACAGTATTGAAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp AGACAGGCCAGCAGGATAAGCAGAGGGGATCCTGTCTaGGCTGGTGGACGCTACACTGCTCACGTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: RQASRISRGDPV*AGGRYTAHVAG
Trigger: ACCAGCTACGTGAGCAGTGTAGCGTCCACCAGCTCAGACAGGATCCCCTCTGCTTATCCTGCTGGCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp CCTGCTGCGAAATCACCTGCACTCTCCGGAACCCACTaGGACAGCAAAAGCCCCCGCTCTGAACAAGGCTTA +
Preference number: 6 (lower is better)
Translates to: PAAKSPALSGTH*DSKSPRSEQGL
Trigger: TAAGCCTTGTTCAGAGCGGGGGCTTTTGCTGTCGCAGTGGGTTCCGGAGAGTGCAGGTGATTTCGCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp AAGCCACGGGCCTCCAGGTCGTATAGGGTAAGGTGGTaGACGTATGCAAAGGCGCCCTCCTTAGAATCTCCC +
Preference number: 6 (lower is better)
Translates to: KPRASRSYRVRW*TYAKAPSLESP
Trigger: GGGAGATTCTAAGGAGGGCGCCTTTGCATACGTGCACCACCTTACCCTATACGACCTGGAGGCCCGTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp CCGGACCACCTGGGGGCTCAATGGTACTGTGAGGCTTaGCTGGCTGTCAGATTTAGAAAGCACGGAGGTGGA +
Preference number: 6 (lower is better)
Translates to: PDHLGAQWYCEA*LAVRFRKHGGG
Trigger: TCCACCTCCGTGCTTTCTAAATCTGACAGCCAGGCAAGCCTCACAGTACCATTGAGCCCCCAGGTGGTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp TTCACCAGACCCAGGGTCAGCTTTAGGAAGCTCATCTaGCGGCTGGCTACCAGCTCCTCTGTCTCCTTGTCG +
Preference number: 6 (lower is better)
Translates to: FTRPRVSFRKLI*RLATSSSVSLS
Trigger: CGACAAGGAGACAGAGGAGCTGGTAGCCAGCCGCCAGATGAGCTTCCTAAAGCTGACCCTGGGTCTGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 72 bp ATACTGTCCTCGCTGATGGTCCTGTGGCTGACTGCTTaGCTCCGGACCACCTGGGGGCTCAATGGTACTGTG +
Preference number: 6 (lower is better)
Translates to: ILSSLMVLWLTA*LRTTWGLNGTV
Trigger: CACAGTACCATTGAGCCCCCAGGTGGTCCGGAGCAAAGCAGTCAGCCACAGGACCATCAGCGAGGACAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp GGTGGACGCTACACTGCTCACGTAGCTGGTGGTGTCTaGGTAGTTGTCCAGGCTGGTCTTACTGATGTCCCG +
Preference number: 6 (lower is better)
Translates to: GGRYTAHVAGGV*VVVQAGLTDVP
Trigger: CGGGACATCAGTAAGACCAGCCTGGACAACTACTCAGACACCACCAGCTACGTGAGCAGTGTAGCGTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp TTCAATACTGTCCTCGCTGATGGTCCTGTGGCTGACTaGTTTGCTCCGGACCACCTGGGGGCTCAATGGTAC +
Preference number: 6 (lower is better)
Translates to: FNTVLADGPVAD*FAPDHLGAQWY
Trigger: GTACCATTGAGCCCCCAGGTGGTCCGGAGCAAAGCAGTCAGCCACAGGACCATCAGCGAGGACAGTATTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp ACGAAGCCACGGGCCTCCAGGTCGTATAGGGTAAGGTaGTGCACGTATGCAAAGGCGCCCTCCTTAGAATCT +
Preference number: 6 (lower is better)
Translates to: TKPRASRSYRVR*CTYAKAPSLES
Trigger: AGATTCTAAGGAGGGCGCCTTTGCATACGTGCACCACCTTACCCTATACGACCTGGAGGCCCGTGGCTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp GTTTTCTATGCTGCCTTCCTCTGTCTCACCCAGTTCTaGAGGACTGATGCTTGCCTGGAAGCGGATGGCTCC +
Preference number: 6 (lower is better)
Translates to: VFYAAFLCLTQF*RTDACLEADGS
Trigger: GGAGCCATCCGCTTCCAGGCAAGCATCAGTCCTCCAGAACTGGGTGAGACAGAGGAAGGCAGCATAGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp TGTCTGAGCTGGTGGACGCTACACTGCTCACGTAGCTaGTGGTGTCTGAGTAGTTGTCCAGGCTGGTCTTAC +
Preference number: 6 (lower is better)
Translates to: CLSWWTLHCSRS*WCLSSCPGWSY
Trigger: GTAAGACCAGCCTGGACAACTACTCAGACACCACCAGCTACGTGAGCAGTGTAGCGTCCACCAGCTCAGACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp TCATCAGGGTTAGAGGTAGTGGATGCCTGGCTGGCCTaGTCCTGGATGTGCTCCATCTCACCAGGACACAAA +
Preference number: 6 (lower is better)
Translates to: SSGLEVVDAWLA*SWMCSISPGHK
Trigger: TTTGTGTCCTGGTGAGATGGAGCACATCCAGGATCAGGCCAGCCAGGCATCCACTACCTCTAACCCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp ACCACCTGGGGGCTCAATGGTACTGTGAGGCTTGCCTaGCTGTCAGATTTAGAAAGCACGGAGGTGGATTTC +
Preference number: 6 (lower is better)
Translates to: TTWGLNGTVRLA*LSDLESTEVDF
Trigger: GAAATCCACCTCCGTGCTTTCTAAATCTGACAGCCAGGCAAGCCTCACAGTACCATTGAGCCCCCAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp AGCGTAGCAGCCATAGCTGGGGACAAAGATAGCCAGTaGAGTCACGAGTTTCCTGACTATGGCCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: SVAAIAGDKDSQ*SHEFPDYGLIF
Trigger: GAAGATGAGGCCATAGTCAGGAAACTCGTGACTGCACTGGCTATCTTTGTCCCCAGCTATGGCTGCTACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp GGGCATTCTTCTAGAGAACTGGAAGGCGGCCTGTCTTaGCTGGGCTTAGAGGGTATGCTTTCTTGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: GHSSRELEGGLS*LGLEGMLSCFS
Trigger: GGAGAAACAAGAAAGCATACCCTCTAAGCCCAGTCAAGACAGGCCGCCTTCCAGTTCTCTAGAAGAATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp ACTGTTGTCTCGGGAAGAAGGGTTGGCATTTTCCACTaGAAAGTCTACACGGAACCCCTGGTCCTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: TVVSGRRVGIFH*KVYTEPLVLLP
Trigger: AGGCAGAAGGACCAGGGGTTCCGTGTAGACTTTTCAGTGGAAAATGCCAACCCTTCTTCCCGAGACAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp TCATTGGGGATGGTCAGTAAGGGTTGGGGTCCCACCTaGTCAGAGAACTCGGAAATAAGAATGAAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: SLGMVSKGWGPT*SENSEIRMKSL
Trigger: GAGGGACTTCATTCTTATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAACCCTTACTGACCATCCCCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 90 bp ACTGGAAGGCGGCCTGTCTTGACTGGGCTTAGAGGGTATGCTTTCTaGTTTCTCCACCATCCTGTCATCGACCTCCACAAAGTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: TGRRPVLTGLRGYAF*FLHHPVIDLHKVFK
Trigger: TTTGAAGACTTTGTGGAGGTCGATGACAGGATGGTGGAGAAACAAGAAAGCATACCCTCTAAGCCCAGTCAAGACAGGCCGCCTTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp AGGTCTCCTCTGAACATGTGTTCAATGTGGCTGAGCTaGGCCAGGGTCTGGGTGAAATATTCAGTGTCACAG +
Preference number: 6 (lower is better)
Translates to: RSPLNMCSMWLS*ARVWVKYSVSQ
Trigger: CTGTGACACTGAATATTTCACCCAGACCCTGGCTCAGCTCAGCCACATTGAACACATGTTCAGAGGAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 72 bp GGAAACCCTTCACAACTGTTGTCTCGGGAAGAAGGGTaGGCATTTTCCACTGAAAAGTCTACACGGAACCCC +
Preference number: 6 (lower is better)
Translates to: GNPSQLLSREEG*AFSTEKSTRNP
Trigger: GGGGTTCCGTGTAGACTTTTCAGTGGAAAATGCCAACCCTTCTTCCCGAGACAACAGTTGTGAAGGGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp ATGAGCGGATCTGCTTCAGCAGGTCTTGATGTTCAATaGTGGACTTCTCCACACTGGCCAGTTCATTGGCTT +
Preference number: 6 (lower is better)
Translates to: MSGSASAGLDVQ*WTSPHWPVHWL
Trigger: AAGCCAATGAACTGGCCAGTGTGGAGAAGTCCATCATTGAACATCAAGACCTGCTGAAGCAGATCCGCTCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp CCTTGTACTCCTCATCTCCCAGTTCCTGCTCCATCTTaGTCAACACAGACTCCACACTGGACTTGTAAGAAC +
Preference number: 6 (lower is better)
Translates to: PCTPHLPVPAPS*STQTPHWTCKN
Trigger: GTTCTTACAAGTCCAGTGTGGAGTCTGTGTTGATCAAGATGGAGCAGGAACTGGGAGATGAGGAGTACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp AAAACTTTGGTGTCATTGGGGATGGTCAGTAAGGGTTaGGGTCCCACCTGCTCAGAGAACTCGGAAATAAGA +
Preference number: 6 (lower is better)
Translates to: KTLVSLGMVSKG*GPTCSENSEIR
Trigger: TCTTATTTCCGAGTTCTCTGAGCAGGTGGGACCCCAACCCTTACTGACCATCCCCAATGACACCAAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp CACTCAGAAGCTCTGGAAAATTCGGCTGAAAGCTCCTaGAACTGCTGCATGATTTTATGCTGGTCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: HSEALENSAESS*NCCMILCWSAE
Trigger: CTCTGCAGACCAGCATAAAATCATGCAGCAGTTCCAGGAGCTTTCAGCCGAATTTTCCAGAGCTTCTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp ACACAAATCATGCCCCTTCAACTTCCGATGAGGGTATaGGCGGATCTGCTTCAGCAGGTCTTGATGTTCAAT +
Preference number: 6 (lower is better)
Translates to: TQIMPLQLPMRV*ADLLQQVLMFN
Trigger: ATTGAACATCAAGACCTGCTGAAGCAGATCCGCTCATACCCTCATCGGAAGTTGAAGGGGCATGATTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS GCA 72 bp AAGCTCCTGGAACTGCTGCATGATTTTATGCTGGTCTaGAGAGATATAAGCCATGCAAAACGGCCTCACGAA +
Preference number: 6 (lower is better)
Translates to: KLLELLHDFMLV*RDISHAKRPHE
Trigger: TTCGTGAGGCCGTTTTGCATGGCTTATATCTCTGCAGACCAGCATAAAATCATGCAGCAGTTCCAGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 72 bp GGACTGATGCTTGCCTGGAAGCGGATGGCTCCTTCATaGCCATCTGGATATGATTCTTCTTCATTAATGGCA +
Preference number: 6 (lower is better)
Translates to: GLMLAWKRMAPS*PSGYDSSSLMA
Trigger: TGCCATTAATGAAGAAGAATCATATCCAGATGGCAATGAAGGAGCCATCCGCTTCCAGGCAAGCATCAGTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp TGGAAAATTCGGCTGAAAGCTCCTGGAACTGCTGCATaGTTTTATGCTGGTCTGCAGAGATATAAGCCATGC +
Preference number: 6 (lower is better)
Translates to: WKIRLKAPGTAA*FYAGLQRYKPC
Trigger: GCATGGCTTATATCTCTGCAGACCAGCATAAAATCATGCAGCAGTTCCAGGAGCTTTCAGCCGAATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CCA 72 bp GTCAAAACACTTGGTGGACTTTGCTTTGATAAGTTTTaGGGTGTAGGCTGGTCTGCAGGTGTAAAGGTCTGT +
Preference number: 6 (lower is better)
Translates to: VKTLGGLCFDKF*GVGWSAGVKVC
Trigger: ACAGACCTTTACACCTGCAGACCAGCCTACACCCCAAAACTTATCAAAGCAAAGTCCACCAAGTGTTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 72 bp ACTTCTCCACACTGGCCAGTTCATTGGCTTTCTCAATaGCCTGAGATGAGTAAAAGCCTTTGTCGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: TSPHWPVHWLSQ*PEMSKSLCRWL
Trigger: AAGCCAACGACAAAGGCTTTTACTCATCTCAGGCAATTGAGAAAGCCAATGAACTGGCCAGTGTGGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS TCA 72 bp TCTCCGTGCCCAAAACTTCAATACTTTCACCACTGCTaGTACTCCCTTTCATATCCATATCCAGGTAGTCCA +
Preference number: 6 (lower is better)
Translates to: SPCPKLQYFHHC*YSLSYPYPGSP
Trigger: TGGACTACCTGGATATGGATATGAAAGGGAGTATCAGCAGTGGTGAAAGTATTGAAGTTTTGGGCACGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2
CDS CAA 72 bp TCAGTGTCACAGAGCTCCTCCAAGGTCTTCAACTTCTaGTCAAAACACTTGGTGGACTTTGCTTTGATAAGT +
Preference number: 6 (lower is better)
Translates to: SVSQSSSKVFNF*SKHLVDFALIS
Trigger: ACTTATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTTGGAGGAGCTCTGTGACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406438.5
ENST00000639332.2