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Pregenerated sensors for SMCR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000223979

Ensembl transcript IDs: ENST00000456090.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CTCTGCTTCCCCATCACTGCCTCCACTTCCCCGCATCCCTTTCCCTaGCAGAGGCTTCTTGCCACAGGGCTCTGGGCACTCACAAGACCT +
Preference number: 5 (lower is better)
Translates to: LCFPITASTSPHPFP*QRLLATGLWALTRP
Trigger: AGGTCTTGTGAGTGCCCAGAGCCCTGTGGCAAGAAGCCTCTGCCAGGGAAAGGGATGCGGGGAAGTGGAGGCAGTGATGGGGAAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS CCA 90 bp CTAGAGACCAGAGGCCTTGAAGGAAGGAAGCCCAAGGGTCTCTCCTaGCTCTGCTTCCCCATCACTGCCTCCACTTCCCCGCATCCCTTT +
Preference number: 5 (lower is better)
Translates to: LETRGLEGRKPKGLS*LCFPITASTSPHPF
Trigger: AAAGGGATGCGGGGAAGTGGAGGCAGTGATGGGGAAGCAGAGCCAGGAGAGACCCTTGGGCTTCCTTCCTTCAAGGCCTCTGGTCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS GCA 90 bp TGGGAAGTCCAAGAGTATGGCACCAGCATCTGGTGGGGGTCTTCATaGTGTATCATCCCATGGTGGAAGGCAGAAGGGCAAGAGAGCACT +
Preference number: 5 (lower is better)
Translates to: WEVQEYGTSIWWGSS*CIIPWWKAEGQEST
Trigger: AGTGCTCTCTTGCCCTTCTGCCTTCCACCATGGGATGATACAGCATGAAGACCCCCACCAGATGCTGGTGCCATACTCTTGGACTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS TCA 90 bp TCTCCTATTCCAGTCCACCGGGGCCTCTCCTCCAGGCAGGAAACATaGTCTCCTTTTGACCTGCTGTGTGACTTTGGATCAGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: SPIPVHRGLSSRQET*SPFDLLCDFGSVTS
Trigger: TGAAGTCACTGATCCAAAGTCACACAGCAGGTCAAAAGGAGATCATGTTTCCTGCCTGGAGGAGAGGCCCCGGTGGACTGGAATAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS CAA 72 bp CCACTTCCCCGCATCCCTTTCCCTGGCAGAGGCTTCTaGCCACAGGGCTCTGGGCACTCACAAGACCTGGCC +
Preference number: 6 (lower is better)
Translates to: PLPRIPFPGRGF*PQGSGHSQDLA
Trigger: GGCCAGGTCTTGTGAGTGCCCAGAGCCCTGTGGCAAGAAGCCTCTGCCAGGGAAAGGGATGCGGGGAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS CCA 72 bp CCCTTTCCCTGGCAGAGGCTTCTTGCCACAGGGCTCTaGGCACTCACAAGACCTGGCCACAGTAAACGCCCT +
Preference number: 6 (lower is better)
Translates to: PFPWQRLLATGL*ALTRPGHSKRP
Trigger: AGGGCGTTTACTGTGGCCAGGTCTTGTGAGTGCCCAGAGCCCTGTGGCAAGAAGCCTCTGCCAGGGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS CAA 90 bp TGGGCACTCACAAGACCTGGCCACAGTAAACGCCCTTGCATCCTATaGAGTGAGCCAAGGATAAGCGTGGTCCCTGGCAGGGTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: WALTRPGHSKRPCIL*SEPRISVVPGRVQD
Trigger: ATCCTGCACCCTGCCAGGGACCACGCTTATCCTTGGCTCACTCAATAGGATGCAAGGGCGTTTACTGTGGCCAGGTCTTGTGAGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS CAA 72 bp ACAAGACCTGGCCACAGTAAACGCCCTTGCATCCTATaGAGTGAGCCAAGGATAAGCGTGGTCCCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: TRPGHSKRPCIL*SEPRISVVPGR
Trigger: CCTGCCAGGGACCACGCTTATCCTTGGCTCACTCAATAGGATGCAAGGGCGTTTACTGTGGCCAGGTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS GCA 72 bp TGGGCACTCACAAGACCTGGCCACAGTAAACGCCCTTaGATCCTATTGAGTGAGCCAAGGATAAGCGTGGTC +
Preference number: 6 (lower is better)
Translates to: WALTRPGHSKRP*ILLSEPRISVV
Trigger: GACCACGCTTATCCTTGGCTCACTCAATAGGATGCAAGGGCGTTTACTGTGGCCAGGTCTTGTGAGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS GCA 72 bp CAAGAGTATGGCACCAGCATCTGGTGGGGGTCTTCATaGTGTATCATCCCATGGTGGAAGGCAGAAGGGCAA +
Preference number: 6 (lower is better)
Translates to: QEYGTSIWWGSS*CIIPWWKAEGQ
Trigger: TTGCCCTTCTGCCTTCCACCATGGGATGATACAGCATGAAGACCCCCACCAGATGCTGGTGCCATACTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS CCA 72 bp GAAGACTGGGAAGTCCAAGAGTATGGCACCAGCATCTaGTGGGGGTCTTCATGCTGTATCATCCCATGGTGG +
Preference number: 6 (lower is better)
Translates to: EDWEVQEYGTSI*WGSSCCIIPWW
Trigger: CCACCATGGGATGATACAGCATGAAGACCCCCACCAGATGCTGGTGCCATACTCTTGGACTTCCCAGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS CCA 72 bp ACAATAGAAATTTATTTGGCTCATGCTTCTGAAGACTaGGAAGTCCAAGAGTATGGCACCAGCATCTGGTGG +
Preference number: 6 (lower is better)
Translates to: TIEIYLAHASED*EVQEYGTSIWW
Trigger: CCACCAGATGCTGGTGCCATACTCTTGGACTTCCCAGTCTTCAGAAGCATGAGCCAAATAAATTTCTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456090.2
CDS TCA 72 bp TTTGTAAACAATAGAAATTTATTTGGCTCATGCTTCTaGAGACTGGGAAGTCCAAGAGTATGGCACCAGCAT +
Preference number: 6 (lower is better)
Translates to: FVNNRNLFGSCF*RLGSPRVWHQH
Trigger: ATGCTGGTGCCATACTCTTGGACTTCCCAGTCTTCAGAAGCATGAGCCAAATAAATTTCTATTGTTTACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456090.2