Pregenerated sensors for SMCO3 (Homo sapiens)
Ensembl gene IDs: ENSG00000179256Ensembl transcript IDs: ENST00000316048.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGGGAATTATTGGTTGGCAAAGGATTTAGAAAACAAACACATCTaGAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: HGNYWLAKDLENKHI*RDSAEPLIGFHSLW Trigger: CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTTGTTTTCTAAATCCTTTGCCAACCAATAATTCCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCCACCTAATGCGTCATGTAGCAAAGGCAGCTGCCTCCTTTTTGCTAGTGTTCTAGGCAGAAGTTACTaGGTATGTCCCCTTATAACT | + |
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Preference number: 2 (lower is better) Translates to: GPPNASCSKGSCLLFASVLGRSY*VCPLIT Trigger: AGTTATAAGGGGACATACTCAGTAACTTCTGCCTAG...AACACTAGCAAAAAGGAGGCAGCTGCCTTTGCTACATGACGCATTAGGTGGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTCATTTACCCCAATGTTaGTCTGGTAGAGCAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPHLPQC*SGRAGC Trigger: ACACCCTGCTCTACCAGATCAACATTGGGGTAAATG...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR GCA 90 bp | AAACACATCTGCAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGGTGTAGCAAAGGCAGCTaGCTCCTTTTTGCTAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: KHICRDSAEPLIGFHSLWCSKGS*LLFASV Trigger: AACACTAGCAAAAAGGAGGCAGCTGCCTTTGCTACA...CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR GCA 90 bp | AAACACATCTGCAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGGAGTAACCCCTATACTTaGTACTCTACGATAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: KHICRDSAEPLIGFHSLWSNPYT*YSTIAF Trigger: AAATGCTATCGTAGAGTAGCAAGTATAGGGGTTACT...CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR TCA 90 bp | GCGATATTTAATTATCACAGTTGGTCAGGGTTGATTGCAGTGACTGAAACAGGACCCCTTATAACTAAATaGTGTTTGAAGCTGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: AIFNYHSWSGLIAVTETGPLITK*CLKLVV Trigger: TACCACCAGCTTCAAACATCATTTAGTTATAAGGGG...TCCTGTTTCAGTCACTGCAATCAACCCTGACCAACTGTGATAATTAAATATCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCCACCTAATGCGTCATGTAGCAAAGGCAGCTGCCTCCTTTTTGCTAGTGTTTCTAGTCATCTAGTCTaGGCATCTCCAGTTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GPPNASCSKGSCLLFASVSSHLV*ASPVSL Trigger: GAGGGAAACTGGAGATGCCAAGACTAGATGACTAGA...AACACTAGCAAAAAGGAGGCAGCTGCCTTTGCTACATGACGCATTAGGTGGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR CAA 90 bp | AAACACATCTGCAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGGCACAGTTGGTCAGGGTaGATTGCAGTGACTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: KHICRDSAEPLIGFHSLWHSWSG*IAVTET Trigger: TGTTTCAGTCACTGCAATCAACCCTGACCAACTGTG...CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR GCA 72 bp | AATGGCCCACCTAATGCGTCATGTAGCAAAGGCAGCTaGCTCCTTTTTGCTAGTGTTGAAAATGAAATTATA | + |
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Preference number: 3 (lower is better) Translates to: NGPPNASCSKGS*LLFASVENEII Trigger: TATAATTTCATTTTCAACACTAGCAAAAAGGAGGCAGCTGCCTTTGCTACATGACGCATTAGGTGGGCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCACTGATCCAGGCATTGTaGACTCAAAACTCATCTAGT | + |
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Preference number: 3 (lower is better) Translates to: LYLDGRINYNKHSLASTALIQAL*TQNSSS Trigger: ACTAGATGAGTTTTGAGTCAACAATGCCTGGATCAG...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCCAGCTGATCCAGGCATaGTTGACTCAAAACTCATCT | + |
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Preference number: 3 (lower is better) Translates to: PFSNPSGLHCVISRRLQIQLIQA*LTQNSS Trigger: AGATGAGTTTTGAGTCAACAATGCCTGGATCAGCTG...GATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCATCCTCATGGGAATTATaGGTTGGCAAAGGATTTAGA | + |
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Preference number: 3 (lower is better) Translates to: LYLDGRINYNKHSLASTASSWEL*VGKGFR Trigger: TCTAAATCCTTTGCCAACCAATAATTCCCATGAGGA...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR GCA 90 bp | GGCCCACCTAATGCGTCATGTAGCAAAGGCAGCTGCCTCCTTTTTGCTAGTGTTAGCGACTGCACTGGCTaGAGATGTAGCTTCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GPPNASCSKGSCLLFASVSDCTG*RCSFSQ Trigger: CTGGGAGAAGCTACATCTGCAGCCAGTGCAGTCGCT...AACACTAGCAAAAAGGAGGCAGCTGCCTTTGCTACATGACGCATTAGGTGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR GCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTAGCCTGCACCCCAAGTaGATATTTAGAACCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPSLHPK*IFRTSV Trigger: GACTGAGGTTCTAAATATGCACTTGGGGTGCAGGCT...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | AAACACATCTGCAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGGGCCAGTTGTGACATTTaGGCCCACAAGTTTAACAGC | + |
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Preference number: 4 (lower is better) Translates to: KHICRDSAEPLIGFHSLWASCDI*AHKFNS Trigger: GCTGTTAAACTTGTGGGCTCAAATGTCACAACTGGC...CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR GCA 90 bp | GGCCCACCTAATGCGTCATGTAGCAAAGGCAGCTGCCTCCTTTTTGCTAGTGTTAGTAACCCCTATACTTaGTACTCTACGATAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: GPPNASCSKGSCLLFASVSNPYT*YSTIAF Trigger: AAATGCTATCGTAGAGTAGCAAGTATAGGGGTTACT...AACACTAGCAAAAAGGAGGCAGCTGCCTTTGCTACATGACGCATTAGGTGGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | AAACACATCTGCAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGGCAGTCAGCTTATTGGTaGCATCGAAGCTGTCAGATA | + |
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Preference number: 4 (lower is better) Translates to: KHICRDSAEPLIGFHSLWQSAYW*HRSCQI Trigger: TATCTGACAGCTTCGATGTCACCAATAAGCTGACTG...CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTCTAGGCAGAAGTTACTaGGTATGTCCCCTTATAACT | + |
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Preference number: 4 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPLGRSY*VCPLIT Trigger: AGTTATAAGGGGACATACTCAGTAACTTCTGCCTAG...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR GCA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCACAATGGAGGCCAGCCTaGACCCCAAGTGCATATTTA | + |
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Preference number: 4 (lower is better) Translates to: LYLDGRINYNKHSLASTAQWRPA*TPSAYL Trigger: TAAATATGCACTTGGGGTGCAGGCTGGCCTCCATTG...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR GCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTGGACAATCATATCTATaGCAAGGCCAAGAACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPGQSYL*QGQEQQ Trigger: TTGCTGTTCTTGGCCTTGGCATAGATATGATTGTCC...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTGGCTTCCATAGCCTTTaGCGTTTTCTAAAATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPGFHSL*RFLKSG Trigger: ACCTGATTTTAGAAAACGCCAAAGGCTATGGAAGCC...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCACATTTACCCCAATGTTaGTCTGGTAGAGCAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LYLDGRINYNKHSLASTAHLPQC*SGRAGC Trigger: ACACCCTGCTCTACCAGATCAACATTGGGGTAAATG...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTCCCCTTATAACTAAATaGTGTTTGAAGCTGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPPLITK*CLKLVV Trigger: TACCACCAGCTTCAAACATCATTTAGTTATAAGGGG...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCATCAAGAAGCTGCTGGTaGAGACGATTTACTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LYLDGRINYNKHSLASTASRSCW*RRFTSS Trigger: GGAAGAAGTAAATCGTCTTCACCAGCAGCTTCTTGA...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCATTTCTGAGGCTGATTTaGACTCCACCAGATGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LYLDGRINYNKHSLASTAFLRLI*TPPDAS Trigger: AGAAGCATCTGGTGGAGTTCAAATCAGCCTCAGAAA...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | CCATTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCCCACTGCTCCCAGGATaGCACGGACAATCATATCTA | + |
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Preference number: 4 (lower is better) Translates to: PFSNPSGLHCVISRRLQIPLLPG*HGQSYL Trigger: TAGATATGATTGTCCGTGCCATCCTGGGAGCAGTGG...GATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTAGAAAAACACTTCAGTaGCAAATAAAACGGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPRKTLQ*QIKRLF Trigger: GAACAGCCGTTTTATTTGCCACTGAAGTGTTTTTCT...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTCTAAAAGAGTCCTCATaGGAATTATTGGTTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPLKESS*ELLVGK Trigger: TTTGCCAACCAATAATTCCCATGAGGACTCTTTTAG...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTGCTGTTCATTTCATTTaGTGTTTCACTGTATTGATG | + |
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Preference number: 4 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPAVHFI*CFTVLM Trigger: CATCAATACAGTGAAACACCAAATGAAATGAACAGC...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | TTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCAGCAGAGAAGCACCAATTTaGGCTAACACAGTGACCAAC | + |
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Preference number: 4 (lower is better) Translates to: FSNPSGLHCVISRRLQISREAPI*ANTVTN Trigger: GTTGGTCACTGTGTTAGCTCAAATTGGTGCTTCTCT...GCTGATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR GCA 90 bp | CCATTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCTGTAGCAAAGGCAGCTaGCTCCTTTTTGCTAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PFSNPSGLHCVISRRLQICSKGS*LLFASV Trigger: AACACTAGCAAAAAGGAGGCAGCTGCCTTTGCTACA...GATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | CCATTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCTTCTTCCCGCCTTTTTaGGTTCTCTGGGTAAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PFSNPSGLHCVISRRLQIFFPPF*VLWVKE Trigger: TTCCTTTACCCAGAGAACCCAAAAAGGCGGGAAGAA...GATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR TCA 90 bp | TTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCAGCGTTGATTGCAGTGACTaGAACAGGACCTTGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: FSNPSGLHCVISRRLQISVDCSD*NRTLMF Trigger: AAACATCAAGGTCCTGTTTCAGTCACTGCAATCAAC...GCTGATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR GCA 90 bp | CCATTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCGAAAACAAACACATCTaGAGAGATTCAGCGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: PFSNPSGLHCVISRRLQIENKHI*RDSAEP Trigger: TGGTTCCGCTGAATCTCTGCAGATGTGTTTGTTTTC...GATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | CCATTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCCCTTTTTGGGTTCTCTaGGTAAAGGAAGTCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: PFSNPSGLHCVISRRLQIPFWVL*VKEVTL Trigger: CAAAGTGACTTCCTTTACCCAGAGAACCCAAAAAGG...GATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCACCTCATGGGAATTATTaGTTGGCAAAGGATTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LYLDGRINYNKHSLASTAPHGNY*LAKDLE Trigger: TTCTAAATCCTTTGCCAACCAATAATTCCCATGAGG...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR GCA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCAAGTGACCTTCTATTCTaGATCCTAAATGCAATATGT | + |
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Preference number: 4 (lower is better) Translates to: LYLDGRINYNKHSLASTASDLLF*ILNAIC Trigger: ACATATTGCATTTAGGATGCAGAATAGAAGGTCACT...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CCA 90 bp | TTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCAGCTTTAATTATCACAGTTaGTCAGGGTTGATTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FSNPSGLHCVISRRLQISFNYHS*SGLIAV Trigger: CACTGCAATCAACCCTGACCAACTGTGATAATTAAA...GCTGATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS GCA 90 bp | GTCCCATCTCTTTTCATCTCAATGGAGGCCAGCCTGCACCCCAAGTaGATATTTAGAACCTCAGTCAGCTTATTGGTGACATCGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: VPSLFISMEASLHPK*IFRTSVSLLVTSKL Trigger: CAGCTTCGATGTCACCAATAAGCTGACTGAGGTTCTAAATATGCACTTGGGGTGCAGGCTGGCCTCCATTGAGATGAAAAGAGATGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTCTTCTTCCCGCCTTTTaGGGTTCTCTGGGTAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPLLPAF*GSLGKG Trigger: TCCTTTACCCAGAGAACCCAAAAAGGCGGGAAGAAG...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS TCA 90 bp | GCCTGCACCCCAAGTGCATATTTAGAACCTCAGTCAGCTTATTGGTaGCATCGAAGCTGTCAGATAAGCAATCAAGAAGCTGCTGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: ACTPSAYLEPQSAYW*HRSCQISNQEAAGE Trigger: TTCACCAGCAGCTTCTTGATTGCTTATCTGACAGCTTCGATGTCACCAATAAGCTGACTGAGGTTCTAAATATGCACTTGGGGTGCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | AAACACATCTGCAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGGACCTCAGTCAGCTTATaGGTGACATCGAAGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: KHICRDSAEPLIGFHSLWTSVSL*VTSKLS Trigger: TGACAGCTTCGATGTCACCAATAAGCTGACTGAGGT...CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | GGCCCACCTAATGCGTCATGTAGCAAAGGCAGCTGCCTCCTTTTTGCTAGTGTTCTTCTGCAATTCCTTTaGGATTTTCATAATGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GPPNASCSKGSCLLFASVLLQFL*DFHNGL Trigger: CAAGCCATTATGAAAATCCAAAAGGAATTGCAGAAG...AACACTAGCAAAAAGGAGGCAGCTGCCTTTGCTACATGACGCATTAGGTGGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCATCTAGTCATCTAGTCTaGGCATCTCCAGTTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LYLDGRINYNKHSLASTASSHLV*ASPVSL Trigger: GAGGGAAACTGGAGATGCCAAGACTAGATGACTAGA...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS TCA 90 bp | CCAAGAACAGCAACTCCAATACTACCAAGGAGAGAAGCACCAATTTaGGCTAACACAGTGACCAACTTGTTAATTATGCCAGTTGTGACA | + |
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Preference number: 5 (lower is better) Translates to: PRTATPILPRREAPI*ANTVTNLLIMPVVT Trigger: TGTCACAACTGGCATAATTAACAAGTTGGTCACTGTGTTAGCTCAAATTGGTGCTTCTCTCCTTGGTAGTATTGGAGTTGCTGTTCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | AAACACATCTGCAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGGGATTTTCATAATGGCTaGGATGATGAGGTCACAGTT | + |
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Preference number: 5 (lower is better) Translates to: KHICRDSAEPLIGFHSLWDFHNG*DDEVTV Trigger: AACTGTGACCTCATCATCCAAGCCATTATGAAAATC...CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTGTTTTCTATAGAGGGTaGGCTCTAGCTTATCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPVFYRG*ALAYLL Trigger: TAAAAGATAAGCTAGAGCCAACCCTCTATAGAAAAC...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | AAACACATCTGCAGAGATTCAGCGGAACCATTAATAGGCTTCCATAGCCTTTGGAACACAGTGACCAACTaGTTAATTATGCCAGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: KHICRDSAEPLIGFHSLWNTVTN*LIMPVV Trigger: CACAACTGGCATAATTAACAAGTTGGTCACTGTGTT...CCAAAGGCTATGGAAGCCTATTAATGGTTCCGCTGAATCTCTGCAGATGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCACAGCTGATCCAGGCATaGTTGACTCAAAACTCATCT | + |
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Preference number: 5 (lower is better) Translates to: LYLDGRINYNKHSLASTAQLIQA*LTQNSS Trigger: AGATGAGTTTTGAGTCAACAATGCCTGGATCAGCTG...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TCATTCGAAGGCCTAGAGTTTGTGTCTAGGCAGAAGTTACTGAGTATGTCCCCTCATGGGAATTATTGGTaGGCAAAGGATTTAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: SFEGLEFVSRQKLLSMSPHGNYW*AKDLEN Trigger: GTTTTCTAAATCCTTTGCCAACCAATAATTCCCATG...AGGGGACATACTCAGTAACTTCTGCCTAGACACAAACTCTAGGCCTTCGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCAGCCACAGTTGGTCAGGGTaGATTGCAGTGACTGAAACA | + |
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Preference number: 5 (lower is better) Translates to: FSNPSGLHCVISRRLQISHSWSG*IAVTET Trigger: TGTTTCAGTCACTGCAATCAACCCTGACCAACTGTG...GCTGATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCAGTAAAGGAAGTCACTTaGGGCCATATTTCCAATATG | + |
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Preference number: 5 (lower is better) Translates to: LYLDGRINYNKHSLASTAVKEVT*GHISNM Trigger: CATATTGGAAATATGGCCCAAAGTGACTTCCTTTAC...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCAGACCGAAATAACCTTTaGCACTATTGCAATTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: LYLDGRINYNKHSLASTADRNNL*HYCNFV Trigger: GACAAAATTGCAATAGTGCAAAAGGTTATTTCGGTC...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCAGCTGGTGTTTCACTGTATaGATGACCTCAGTAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: FSNPSGLHCVISRRLQISWCFTV*MTSVMA Trigger: TGCCATTACTGAGGTCATCAATACAGTGAAACACCA...GCTGATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | TTGTACTTGGATGGGAGAATCAACTATAACAAACACAGTCTGGCATCAACAGCAGGCTGTTCATTTCATTaGGTGTTTCACTGTATTGAT | + |
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Preference number: 5 (lower is better) Translates to: LYLDGRINYNKHSLASTAGCSFH*VFHCID Trigger: ATCAATACAGTGAAACACCAAATGAAATGAACAGCC...TGCTGTTGATGCCAGACTGTGTTTGTTATAGTTGATTCTCCCATCCAAGTACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS-3UTR CAA 90 bp | CCATTTTCAAATCCATCCGGTTTACATTGTGTAATCAGTAGACGTTTACAGATCTCCTCATGGGAATTATaGGTTGGCAAAGGATTTAGA | + |
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Preference number: 5 (lower is better) Translates to: PFSNPSGLHCVISRRLQISSWEL*VGKGFR Trigger: TCTAAATCCTTTGCCAACCAATAATTCCCATGAGGA...GATCTGTAAACGTCTACTGATTACACAATGTAAACCGGATGGATTTGAAAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS GCA 72 bp | TGGTCCCATCTCTTTTCATCTCAATGGAGGCCAGCCTaGACCCCAAGTGCATATTTAGAACCTCAGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: WSHLFSSQWRPA*TPSAYLEPQSA Trigger: AGCTGACTGAGGTTCTAAATATGCACTTGGGGTGCAGGCTGGCCTCCATTGAGATGAAAAGAGATGGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS GCA 72 bp | CCACTGCTCCCAGGATGGCACGGACAATCATATCTATaGCAAGGCCAAGAACAGCAACTCCAATACTACCAA | + |
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Preference number: 6 (lower is better) Translates to: PLLPGWHGQSYL*QGQEQQLQYYQ Trigger: TTGGTAGTATTGGAGTTGCTGTTCTTGGCCTTGGCATAGATATGATTGTCCGTGCCATCCTGGGAGCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS CAA 72 bp | GCTGCTGGTGAAGACGATTTACTTCTTCCCGCCTTTTaGGGTTCTCTGGGTAAAGGAAGTCACTTTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AAGEDDLLLPAF*GSLGKGSHFGP Trigger: TGGCCCAAAGTGACTTCCTTTACCCAGAGAACCCAAAAAGGCGGGAAGAAGTAAATCGTCTTCACCAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS CAA 90 bp | GCCAGCCTGCACCCCAAGTGCATATTTAGAACCTCAGTCAGCTTATaGGTGACATCGAAGCTGTCAGATAAGCAATCAAGAAGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASLHPKCIFRTSVSL*VTSKLSDKQSRSCW Trigger: CCAGCAGCTTCTTGATTGCTTATCTGACAGCTTCGATGTCACCAATAAGCTGACTGAGGTTCTAAATATGCACTTGGGGTGCAGGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS CCA 72 bp | CTGCTGGTGAAGACGATTTACTTCTTCCCGCCTTTTTaGGTTCTCTGGGTAAAGGAAGTCACTTTGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLVKTIYFFPPF*VLWVKEVTLGH Trigger: ATGGCCCAAAGTGACTTCCTTTACCCAGAGAACCCAAAAAGGCGGGAAGAAGTAAATCGTCTTCACCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS GCA 72 bp | CTTTTCATCTCAATGGAGGCCAGCCTGCACCCCAAGTaGATATTTAGAACCTCAGTCAGCTTATTGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: LFISMEASLHPK*IFRTSVSLLVT Trigger: TGTCACCAATAAGCTGACTGAGGTTCTAAATATGCACTTGGGGTGCAGGCTGGCCTCCATTGAGATGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS TCA 72 bp | TCGAAGCTGTCAGATAAGCAATCAAGAAGCTGCTGGTaGAGACGATTTACTTCTTCCCGCCTTTTTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SKLSDKQSRSCW*RRFTSSRLFGF Trigger: GAACCCAAAAAGGCGGGAAGAAGTAAATCGTCTTCACCAGCAGCTTCTTGATTGCTTATCTGACAGCTTCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS CCA 72 bp | AAGACGATTTACTTCTTCCCGCCTTTTTGGGTTCTCTaGGTAAAGGAAGTCACTTTGGGCCATATTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: KTIYFFPPFWVL*VKEVTLGHISN Trigger: ATTGGAAATATGGCCCAAAGTGACTTCCTTTACCCAGAGAACCCAAAAAGGCGGGAAGAAGTAAATCGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS CAA 72 bp | CACCCCAAGTGCATATTTAGAACCTCAGTCAGCTTATaGGTGACATCGAAGCTGTCAGATAAGCAATCAAGA | + |
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Preference number: 6 (lower is better) Translates to: HPKCIFRTSVSL*VTSKLSDKQSR Trigger: TCTTGATTGCTTATCTGACAGCTTCGATGTCACCAATAAGCTGACTGAGGTTCTAAATATGCACTTGGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS TCA 72 bp | CCAAGTGCATATTTAGAACCTCAGTCAGCTTATTGGTaGCATCGAAGCTGTCAGATAAGCAATCAAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: PSAYLEPQSAYW*HRSCQISNQEA Trigger: AGCTTCTTGATTGCTTATCTGACAGCTTCGATGTCACCAATAAGCTGACTGAGGTTCTAAATATGCACTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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| CDS TCA 72 bp | GCAACTCCAATACTACCAAGGAGAGAAGCACCAATTTaGGCTAACACAGTGACCAACTTGTTAATTATGCCA | + |
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Preference number: 6 (lower is better) Translates to: ATPILPRREAPI*ANTVTNLLIMP Trigger: TGGCATAATTAACAAGTTGGTCACTGTGTTAGCTCAAATTGGTGCTTCTCTCCTTGGTAGTATTGGAGTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316048.2 |
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