RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMCHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101596

Ensembl transcript IDs: ENST00000320876.11, ENST00000577300.1, ENST00000577880.5, ENST00000581711.1, ENST00000583800.1, ENST00000584897.5, ENST00000642953.1, ENST00000645355.1

Found 587 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATaGAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCT +
Preference number: 1 (lower is better)
Translates to: ILSLVSHPLGLLKQR*RKQGILTETNGLFS
Trigger: AGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR GCA 90 bp GCGTCAGTGGTTAGGGTGACTACACAGTCCATGTCACTTGCCAGATaGCAAGAAATAACCATCGCAGCTCTATCATCTTCAATTTGTGCT +
Preference number: 1 (lower is better)
Translates to: ASVVRVTTQSMSLAR*QEITIAALSSSICA
Trigger: AGCACAAATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGACATGGACTGTGTAGTCACCCTAACCACTGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR TCA 90 bp TCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTCTCTGTCACCTCTCATACATCTGTT +
Preference number: 1 (lower is better)
Translates to: SWSSETEMQKAGHSY*DQWPLLSVTSHTSV
Trigger: AACAGATGTATGAGAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR CCA 90 bp ACCAACAAGTCTCTTCTCCGAGTGGGACTTGATGGTAACTATAACTaGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTA +
Preference number: 1 (lower is better)
Translates to: TNKSLLRVGLDGNYN*DRANQRHGSTGFAL
Trigger: TAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTTATAGTTACCATCAAGTCCCACTCGGAGAAGAGACTTGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR TCA 90 bp CTTTTAGGAGGAACTGGACAATCTGTCGTCTCAACCTTTGGTGAATaGCGCAATGAGTCATTACACTTACGTATGGGAGTCATACCTAGT +
Preference number: 1 (lower is better)
Translates to: LLGGTGQSVVSTFGE*RNESLHLRMGVIPS
Trigger: ACTAGGTATGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAGATTGTCCAGTTCCTCCTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR TCA 90 bp CCAAATACCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTaGAGGCCCCCAAACTTTCCATTACTTCGAATTCGATCTCCATCT +
Preference number: 1 (lower is better)
Translates to: PNTIPRSLSIGGALF*RPPNFPLLRIRSPS
Trigger: AGATGGAGATCGAATTCGAAGTAATGGAAAGTTTGGGGGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR GCA 90 bp TTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATaGCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAG +
Preference number: 1 (lower is better)
Translates to: LNGCFQSHLNRNGNS*PGTCIVPRNTQSGK
Trigger: CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR CCA 90 bp ATTGCCTTTTGTCCTTCTACACTGAATATTTGTAGTCTTGCAACATaGCTACTGGGAAGCAACTTAATAGTCTTCTCCACAGGTGCCACA +
Preference number: 1 (lower is better)
Translates to: IAFCPSTLNICSLAT*LLGSNLIVFSTGAT
Trigger: TGTGGCACCTGTGGAGAAGACTATTAAGTTGCTTCCCAGTAGCCATGTTGCAAGACTACAAATATTCAGTGTAGAAGGACAAAAGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR GCA 90 bp GAACTTGAATTGCAGATCCTGTTAAAATACTGGTTCCAGAACTACTaGAATCTACAACATAGACTGGAAGGTTTGGAGCACCTGAAAACT +
Preference number: 1 (lower is better)
Translates to: ELELQILLKYWFQNY*NLQHRLEGLEHLKT
Trigger: AGTTTTCAGGTGCTCCAAACCTTCCAGTCTATGTTGTAGATTGCAGTAGTTCTGGAACCAGTATTTTAACAGGATCTGCAATTCAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR TCA 90 bp TCTTACTGTAAACGCACTTTCCAAAGACACATGATCATCTTGGAATaGAACCTGGCAATAGCGCATATCTTTTACAGATGTTGGTACTTG +
Preference number: 1 (lower is better)
Translates to: SYCKRTFQRHMIILE*NLAIAHIFYRCWYL
Trigger: CAAGTACCAACATCTGTAAAAGATATGCGCTATTGCCAGGTTTCATTCCAAGATGATCATGTGTCTTTGGAAAGTGCGTTTACAGTAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR TCA 90 bp ACAGCTGGTGTAGGTGGTTTAATTTTAGGTACTAACTTCACAGGTTaGTTAGGCAGGACTTCAACTATAACCTGTTCACTGTTGAGAATA +
Preference number: 1 (lower is better)
Translates to: TAGVGGLILGTNFTG*LGRTSTITCSLLRI
Trigger: TATTCTCAACAGTGAACAGGTTATAGTTGAAGTCCTGCCTAATCAACCTGTGAAGTTAGTACCTAAAATTAAACCACCTACACCAGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR CCA 90 bp ATTCATAAAATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATaGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCA +
Preference number: 1 (lower is better)
Translates to: IHKIEWLFPVPSESK*KFMPRYLYCPQKYS
Trigger: TGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR CCA 90 bp AAACTCACGCCAAGTAAAACAAAGATCCTTATTTCCAGGAGGACCTaGAATAAATTTGATGCCTCTTACACTTATACTCTGTGTGTTTTC +
Preference number: 1 (lower is better)
Translates to: KLTPSKTKILISRRT*NKFDASYTYTLCVF
Trigger: GAAAACACACAGAGTATAAGTGTAAGAGGCATCAAATTTATTCCAGGTCCTCCTGGAAATAAGGATCTTTGTTTTACTTGGCGTGAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR CCA 90 bp ATTGCTAGCTTTTGTAAGACTTATTTTAACATGTTGTACCGGTGCTaGATTATCCCACTGATCACAAAGTTGAACAATAATAGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: IASFCKTYFNMLYRC*IIPLITKLNNNRVL
Trigger: CAGAACCCTATTATTGTTCAACTTTGTGATCAGTGGGATAATCCAGCACCGGTACAACATGTTAAAATAAGTCTTACAAAAGCTAGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR CCA 90 bp GTTCCCACTGGTAGACAGCTTCCACATTTTCATGGAAATACGTGCTaGATTAATGTTTTTAATGATACTGTCATCTTCAGAAATAACACT +
Preference number: 1 (lower is better)
Translates to: VPTGRQLPHFHGNTC*INVFNDTVIFRNNT
Trigger: AGTGTTATTTCTGAAGATGACAGTATCATTAAAAACATTAATCCAGCACGTATTTCCATGAAAATGTGGAAGCTGTCTACCAGTGGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR CCA 90 bp ATTACTATGAAGTATCTTAGTGAGTATTTTGTCAGTCACTGTTGCTaGGCATTCAATGAATTTTATTCATCCCTAGGAAATCCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: ITMKYLSEYFVSHCC*AFNEFYSSLGNPLP
Trigger: TGGAAGAGGATTTCCTAGGGATGAATAAAATTCATTGAATGCCCAGCAACAGTGACTGACAAAATACTCACTAAGATACTTCATAGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR-3UTR TCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: AESRAFLLRPMASSLCHLAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR TCA 90 bp CCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTGAAGGCCCCCAAACTGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: PFPEVYPLEELYSEGPQTAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...AGTTTGGGGGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR TCA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR TCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR GCA 90 bp TCCCTTCCAGGACTACTTTCTGCCAGCACCAGACTCATGATTTCAGCCGAACCAAACATGTTGTACCGGTaGTGGATTATCCCACTGATC +
Preference number: 2 (lower is better)
Translates to: SLPGLLSASTRLMISAEPNMLYR*WIIPLI
Trigger: GATCAGTGGGATAATCCAGCACCGGTACAACATGTT...TGGTTCGGCTGAAATCATGAGTCTGGTGCTGGCAGAAAGTAGTCCTGGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR TCA 90 bp ATCAGACACTGTTTTGGAACTGGAGCTCCAAATACCATTCCCCGAAGTTTATCCGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: IRHCFGTGAPNTIPRSLSAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...GGATAAACTTCGGGGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR GCA 90 bp GTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATTTGTCCAGGACTACTTTCTaGCAGCACCAGACTCTGGGC +
Preference number: 2 (lower is better)
Translates to: VTCQMPRNNHRSSIIFNLSRTTF*QHQTLG
Trigger: GCCCAGAGTCTGGTGCTGGCAGAAAGTAGTCCTGGA...CAAATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645355.1
3UTR-3UTR CCA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTCTGACCTCAAACTCCTaGGCTCAAGCGACACTCTTG +
Preference number: 2 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCLTSNS*AQATLL
Trigger: CAAGAGTGTCGCTTGAGCCCAGGAGTTTGAGGTCAG...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577880.5
3UTR-3UTR CCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTTGTTTCTGCATTTGCTaGGGGTCGGTTCCCACTGGT +
Preference number: 2 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSCFCIC*GSVPTG
Trigger: ACCAGTGGGAACCGACCCCCAGCAAATGCAGAAACA...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR TCA 90 bp GAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTGTAATCCCAGTACTTTaGGAGGCCAAGACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: EIHAQVLVLSPEILSLVSVIPVL*EAKTGR
Trigger: TCTGCCTGTCTTGGCCTCTCAAAGTACTGGGATTAC...ACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642953.1
3UTR-3UTR CCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTAAGTGCTTCAATGTGTaGCACCTGTTGTGTTGTAGG +
Preference number: 2 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGKCFNV*HLLCCR
Trigger: CCTACAACACAACAGGTGCCACACATTGAAGCACTT...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR TCA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCGTTTCCAGTCCCATCTaGATCGAAATGGAAATTCAT +
Preference number: 2 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPVSSPI*IEMEIH
Trigger: ATGAATTTCCATTTCGATTCAGATGGGACTGGAAAC...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR TCA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCAACCTTTGGTGAATaGCGCAATGAGTCATTACAC +
Preference number: 2 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSSTFGE*RNESLH
Trigger: GTGTAATGACTCATTGCGTCATTCACCAAAGGTTGA...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR GCA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTGGTTCCAGAACTACTaGAATCTACAACATAGACTG +
Preference number: 2 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPWFQNY*NLQHRL
Trigger: CAGTCTATGTTGTAGATTGCAGTAGTTCTGGAACCA...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CCA 90 bp TTGTCTCTCACGTTGCTGGCTACCCTCATATGTGTGATGACTGTTAGTTGTACATTTGCTTTAAACATGTaGATGTTGGGCCGAGCATGG +
Preference number: 2 (lower is better)
Translates to: LSLTLLATLICVMTVSCTFALNM*MLGRAW
Trigger: CCATGCTCGGCCCAACATCCACATGTTTAAAGCAAA...TGTACAACTAACAGTCATCACACATATGAGGGTAGCCAGCAACGTGAGAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR-3UTR CCA 90 bp TTGTCTCTCACGTTGCTGGCTACCCTCATATGTGTGATGACTGTTAGTTGTACAGGCAAATCAACGTCATaGGTCCACAGGTTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: LSLTLLATLICVMTVSCTGKSTS*VHRFCF
Trigger: AAAGCAAAACCTGTGGACCCATGACGTTGATTTGCC...TGTACAACTAACAGTCATCACACATATGAGGGTAGCCAGCAACGTGAGAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR-3UTR TCA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCCGAAGGTACTCTAATTaGCTGTTAAGATCCTTATTC +
Preference number: 2 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPRRYSN*LLRSLF
Trigger: GAATAAGGATCTTAACAGTCAATTAGAGTACCTTCG...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR TCA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAATAACTACTTCTCCTTaGAGCTCTTGGCCCATCTGT +
Preference number: 2 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEEITTSP*SSWPIC
Trigger: ACAGATGGGCCAAGAGCTTCAAGGAGAAGTAGTTAT...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR GCA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACTCACACTGTCTAGTTTaGACACAGCAGAACGATACT +
Preference number: 2 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHSHCLV*TQQNDT
Trigger: AGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR GCA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAATCCTCATATCCGGAGTaGGAAGGTACTCTAATTGAC +
Preference number: 2 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEESSYPE*EGTLID
Trigger: GTCAATTAGAGTACCTTCGCACTCCGGATATGAGGA...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR CAA 90 bp ACTGCTGAAGAAGATCTATTTGTTCCCCTAAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATACCATTCCCCGAAGTTTATCCATTG +
Preference number: 2 (lower is better)
Translates to: TAEEDLFVPLRSDTV*ELELQIPFPEVYPL
Trigger: CAATGGATAAACTTCGGGGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCTTAGGGGAACAAATAGATCTTCTTCAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR TCA 90 bp GTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATTTGTCAACCTTTGGTGAATaGCGCAATGAGTCATTACAC +
Preference number: 2 (lower is better)
Translates to: VTCQMPRNNHRSSIIFNLSTFGE*RNESLH
Trigger: GTGTAATGACTCATTGCGTCATTCACCAAAGGTTGA...CAAATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CCA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGCCATCTGAATCGAAATaGAAATTCATGCCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWPSESK*KFMPRY
Trigger: GTACCTGGGCATGAATTTCCATTTCGATTCAGATGG...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CCA 90 bp CATGTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATTCTTTTAGGAGGAACTaGACAATCTGTCGTCTCAAC +
Preference number: 2 (lower is better)
Translates to: HVTCQMPRNNHRSSIIFNSFRRN*TICRLN
Trigger: GTTGAGACGACAGATTGTCCAGTTCCTCCTAAAAGA...ATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CCA 90 bp AATCTGTCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTAATGTTGTACCGGTGCTaGATTATCCCACTGATCACA +
Preference number: 2 (lower is better)
Translates to: NLSSQPLVNDAMSHYTYVMLYRC*IIPLIT
Trigger: TGTGATCAGTGGGATAATCCAGCACCGGTACAACAT...TACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR CAA 90 bp AAAAATAGAACTGTTTTACCAACAAGTCTCTTCTCCGAGTGGGACTaGATGGTAACTATAACTGGGATAGGGCAAATCAACGTCATGGGT +
Preference number: 2 (lower is better)
Translates to: KNRTVLPTSLFSEWD*MVTITGIGQINVMG
Trigger: ACCCATGACGTTGATTTGCCCTATCCCAGTTATAGTTACCATCAAGTCCCACTCGGAGAAGAGACTTGTTGGTAAAACAGTTCTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR-3UTR TCA 90 bp TCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGTCAGTTTCCAGTCCCATCTaGATCGAAATGGAAATTCAT +
Preference number: 2 (lower is better)
Translates to: SQPLVNDAMSHYTYVWESVSSPI*IEMEIH
Trigger: ATGAATTTCCATTTCGATTCAGATGGGACTGGAAAC...TGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR TCA 90 bp AATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGTTTCCAGTCCCATCTaGATCGAAATGGAAATTCAT +
Preference number: 2 (lower is better)
Translates to: NTQSGKSPSWSSETEMQKVSSPI*IEMEIH
Trigger: ATGAATTTCCATTTCGATTCAGATGGGACTGGAAAC...TTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR TCA 90 bp CATGTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATGTTTCCAGTCCCATCTaGATCGAAATGGAAATTCAT +
Preference number: 2 (lower is better)
Translates to: HVTCQMPRNNHRSSIIFNVSSPI*IEMEIH
Trigger: ATGAATTTCCATTTCGATTCAGATGGGACTGGAAAC...ATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR TCA 90 bp TGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGCGAAGGTACTCTAATTaGCTGTTAAGATCCTTATTC +
Preference number: 2 (lower is better)
Translates to: WLFPVPSESKWKFMPRYLRRYSN*LLRSLF
Trigger: GAATAAGGATCTTAACAGTCAATTAGAGTACCTTCG...CAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR GCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACATTCCTCTTACACATTTaGAAGGTAGTGACAACCAAA +
Preference number: 2 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETFLLHI*KVVTTK
Trigger: TTTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAA...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
3UTR-3UTR GCA 90 bp TTCCTCATTAGAGCCTTTAATGGTGGCTATTATAGTGCCAACCAAATCAATTCCTCCTCATATCCGGAGTaGGAAGGTACTCTAATTGAC +
Preference number: 2 (lower is better)
Translates to: FLIRAFNGGYYSANQINSSSYPE*EGTLID
Trigger: GTCAATTAGAGTACCTTCGCACTCCGGATATGAGGA...GGAATTGATTTGGTTGGCACTATAATAGCCACCATTAAAGGCTCTAATGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CCA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTAAAGGGCATAATGTCTaGAATAATTCCAGTAAATCC +
Preference number: 2 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSKGHNV*NNSSKS
Trigger: GGATTTACTGGAATTATTCCAGACATTATGCCCTTT...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CCA 90 bp TATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATCTATCTTTTAGGAGGAACTaGACAATCTGTCGTCTCAAC +
Preference number: 2 (lower is better)
Translates to: YSHCLVCTQQNDTAEEDLSFRRN*TICRLN
Trigger: GTTGAGACGACAGATTGTCCAGTTCCTCCTAAAAGA...TAGATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CCA 90 bp CACTGTTGCTGGGCATTCAATGAATTTTATTCATCCCTAGGAAATCCTCTTCCAAGTCTCTTCTCCGAGTaGGACTTGATGGTAACTATA +
Preference number: 2 (lower is better)
Translates to: HCCWAFNEFYSSLGNPLPSLFSE*DLMVTI
Trigger: TATAGTTACCATCAAGTCCCACTCGGAGAAGAGACT...TGGAAGAGGATTTCCTAGGGATGAATAAAATTCATTGAATGCCCAGCAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR-3UTR CCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTTTTCCCAATAAAAAGTaGGGTATCAGTATCTTCCTC +
Preference number: 2 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSFPNKK*GISIFL
Trigger: GAGGAAGATACTGATACCCCACTTTTTATTGGGAAA...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTCTTTTCTATAATGATTaGCCGCATCCAGATTATCCA +
Preference number: 2 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSLFYND*PHPDYP
Trigger: TGGATAATCTGGATGCGGCCAATCATTATAGAAAAG...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645355.1
3UTR-3UTR TCA 90 bp AATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAACGAAGGTACTCTAATTaGCTGTTAAGATCCTTATTC +
Preference number: 2 (lower is better)
Translates to: NTQSGKSPSWSSETEMQKRRYSN*LLRSLF
Trigger: GAATAAGGATCTTAACAGTCAATTAGAGTACCTTCG...TTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR GCA 90 bp AATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAATTAATAAATGCCATGTaGCAGTTTTACAGTCACTGC +
Preference number: 2 (lower is better)
Translates to: NTQSGKSPSWSSETEMQKLINAM*QFYSHC
Trigger: GCAGTGACTGTAAAACTGGCACATGGCATTTATTAA...TTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
3UTR-3UTR CCA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCCCATCTGAATCGAAATaGAAATTCATGCCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSPSESK*KFMPRY
Trigger: GTACCTGGGCATGAATTTCCATTTCGATTCAGATGG...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR TCA 90 bp AAACAAAGATCCTTATTTCCAGGAGGACCTGGAATAAATTTGATGCCTCTTACAATGATCATCTTGGAATaGAACCTGGCAATAGCGCAT +
Preference number: 2 (lower is better)
Translates to: KQRSLFPGGPGINLMPLTMIILE*NLAIAH
Trigger: ATGCGCTATTGCCAGGTTTCATTCCAAGATGATCAT...TGTAAGAGGCATCAAATTTATTCCAGGTCCTCCTGGAAATAAGGATCTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR GCA 90 bp ACCTGGAATAAATTTGATGCCTCTTACACTTATACTCTGTGTGTTTTCCTGAAAAGTCTTCTCCACAGGTaGCACATCTTTACAACTAGG +
Preference number: 2 (lower is better)
Translates to: TWNKFDASYTYTLCVFLKSLLHR*HIFTTR
Trigger: CCTAGTTGTAAAGATGTGGCACCTGTGGAGAAGACT...TTTCAGGAAAACACACAGAGTATAAGTGTAAGAGGCATCAAATTTATTCCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CCA 90 bp TATAATCTAATGTCTAAGGACTCCAAATATTGGTACGGGGTGAGTATCCCTAATCCATCTGAATCGAAATaGAAATTCATGCCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: YNLMSKDSKYWYGVSIPNPSESK*KFMPRY
Trigger: GTACCTGGGCATGAATTTCCATTTCGATTCAGATGG...ATTAGGGATACTCACCCCGTACCAATATTTGGAGTCCTTAGACATTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
3UTR-3UTR CCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTGTAGTCTTGCAACATaGCTACTGGGAAGCAACTTA +
Preference number: 2 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMCSLAT*LLGSNL
Trigger: TAAGTTGCTTCCCAGTAGCCATGTTGCAAGACTACA...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CCA 90 bp GTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATTTGATCATAAAACCAAACTaGATACAATATGTCCCCACT +
Preference number: 2 (lower is better)
Translates to: VTCQMPRNNHRSSIIFNLIIKPN*IQYVPT
Trigger: AGTGGGGACATATTGTATCCAGTTTGGTTTTATGAT...CAAATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR CAA 90 bp TCCAGTAAATCCATAATGTCCAGTAAGATTCATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SSKSIMSSKIHKIEW*FPVPSESKWKFMPR
Trigger: CCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTATGAATCTTACTGGACATTATGGATTTACTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR GCA 90 bp CACTGTTGCTGGGCATTCAATGAATTTTATTCATCCCTAGGAAATCCTCTTCCAGTCCTGGCTCCTTTCTaGTACATAGTAATTATAATT +
Preference number: 2 (lower is better)
Translates to: HCCWAFNEFYSSLGNPLPVLAPF*YIVIII
Trigger: AATTATAATTACTATGTAGCAGAAAGGAGCCAGGAC...TGGAAGAGGATTTCCTAGGGATGAATAAAATTCATTGAATGCCCAGCAACAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR-3UTR GCA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTTTCCTCTTACACATTTaGAAGGTAGTGACAACCAAA +
Preference number: 2 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSFLLHI*KVVTTK
Trigger: TTTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAA...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
3UTR-3UTR GCA 90 bp TCTACATTATCTGGAAATGTTAACAAGTCTCGAGCAAAGACTGGATCTCCAATGAGGTATTTCAATTCTTaGTTTAAGCGTCTGGTCTTT +
Preference number: 2 (lower is better)
Translates to: STLSGNVNKSRAKTGSPMRYFNS*FKRLVF
Trigger: AAAGACCAGACGCTTAAAGCAAGAATTGAAATACCT...CATTGGAGATCCAGTCTTTGCTCGAGACTTGTTAACATTTCCAGATAATGTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR GCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTTCAGGATTAATAAATaGCATGTGCCAGTTTTACAG +
Preference number: 2 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMFRINK*HVPVLQ
Trigger: CTGTAAAACTGGCACATGGCATTTATTAATCCTGAA...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
3UTR-3UTR CCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGAAAGGGCATAATGTCTaGAATAATTCCAGTAAATCC +
Preference number: 2 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMKGHNV*NNSSKS
Trigger: GGATTTACTGGAATTATTCCAGACATTATGCCCTTT...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR TCA 72 bp CATCATAGATACGACGTGCAGCGTCAGTGGTTAGGGTaGCTACACAGTCCATGTCACTTGCCAGATGCCAAG +
Preference number: 3 (lower is better)
Translates to: HHRYDVQRQWLG*LHSPCHLPDAK
Trigger: CTTGGCATCTGGCAAGTGACATGGACTGTGTAGTCACCCTAACCACTGACGCTGCACGTCGTATCTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp GGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGGATGTTGGGTGTAATCTCAGTACTTaGGGAGGCCGCGGCAGGAGA +
Preference number: 3 (lower is better)
Translates to: GKSTSWVHRFCFKHVDVGCNLST*GGRGRR
Trigger: TCTCCTGCCGCGGCCTCCCAAAGTACTGAGATTACA...CCCAACATCCACATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR CCA 72 bp TCTCTTCTCCGAGTGGGACTTGATGGTAACTATAACTaGGATAGGGCAAATCAACGTCATGGGTCCACAGGT +
Preference number: 3 (lower is better)
Translates to: SLLRVGLDGNYN*DRANQRHGSTG
Trigger: ACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTTATAGTTACCATCAAGTCCCACTCGGAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR-3UTR CAA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 3 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp CCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 3 (lower is better)
Translates to: PEILSLVSHPLGLLKQRCAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...GCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR CCA 72 bp TGGAGCTCCAAATACCATTCCCCGAAGTTTATCCATTaGAGGAGCTTTATTCTGAAGGCCCCCAAACTTTCC +
Preference number: 3 (lower is better)
Translates to: WSSKYHSPKFIH*RSFILKAPKLS
Trigger: GGAAAGTTTGGGGGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGGAGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp TCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 3 (lower is better)
Translates to: SSQPLVNDAMSHYTYVWEAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...CTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCTTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 3 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTCTGTCGTCTCAACCTTaGGTGAATGACGCAATGAGT +
Preference number: 3 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSLSSQP*VNDAMS
Trigger: ACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp CATGTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATGAGTTTACAGGGCCCTaGGCTGTAACACCTCGAATT +
Preference number: 3 (lower is better)
Translates to: HVTCQMPRNNHRSSIIFNEFTGP*AVTPRI
Trigger: AATTCGAGGTGTTACAGCCAAGGGCCCTGTAAACTC...ATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTCATAGACTGGAAGGTTaGGAGCACCTGAAAACTTAC +
Preference number: 3 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSHRLEG*EHLKTY
Trigger: GTAAGTTTTCAGGTGCTCCAAACCTTCCAGTCTATG...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp GGTCGGTTCCCACTGGTAGACAGCTTCCACATTTTCATGGAAATACGTGCTGGAAGGTTGTTTTCAAATTaGAGCTATCAAGTCCAACCC +
Preference number: 3 (lower is better)
Translates to: GRFPLVDSFHIFMEIRAGRLFSN*SYQVQP
Trigger: GGGTTGGACTTGATAGCTCAAATTTGAAAACAACCT...TCCAGCACGTATTTCCATGAAAATGTGGAAGCTGTCTACCAGTGGGAACCGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp GCCAGCACCAGACTCATGATTTCAGCCGAACCATTCACGAAGGGGAATTCAAGTCCACTGATCACAAAGTaGAACAATAATAGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: ASTRLMISAEPFTKGNSSPLITK*NNNRVL
Trigger: CAGAACCCTATTATTGTTCAACTTTGTGATCAGTGG...ACTTGAATTCCCCTTCGTGAATGGTTCGGCTGAAATCATGAGTCTGGTGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp GAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTTGTAATCCCAGTACTTaGAGAGGCCAAGACAGGCAG +
Preference number: 3 (lower is better)
Translates to: EIHAQVLVLSPEILSLVSCNPST*RGQDRQ
Trigger: CTGCCTGTCTTGGCCTCTCAAAGTACTGGGATTACA...ACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642953.1
3UTR TCA 72 bp GGAACTGGACAATCTGTCGTCTCAACCTTTGGTGAATaGCGCAATGAGTCATTACACTTACGTATGGGAGTC +
Preference number: 3 (lower is better)
Translates to: GTGQSVVSTFGE*RNESLHLRMGV
Trigger: GACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAGATTGTCCAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR GCA 72 bp GTTAGGGTGACTACACAGTCCATGTCACTTGCCAGATaGCAAGAAATAACCATCGCAGCTCTATCATCTTCA +
Preference number: 3 (lower is better)
Translates to: VRVTTQSMSLAR*QEITIAALSSS
Trigger: TGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGACATGGACTGTGTAGTCACCCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 3 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACTTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 3 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp ACCAGACTCATGATTTCAGCCGAACCATTCACGAAGGGGAATTCAAGTGTTCTATTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 3 (lower is better)
Translates to: TRLMISAEPFTKGNSSVLFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...TAGAACACTTGAATTCCCCTTCGTGAATGGTTCGGCTGAAATCATGAGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTATGGTTCTAAGGTTCTaGATAAAAGTGGTAGCCGGG +
Preference number: 3 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSMVLRF*IKVVAG
Trigger: CCCGGCTACCACTTTTATCAAGAACCTTAGAACCAT...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 3 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTTTTCCTCTTACACATTaGCAAGGTAGTGACAACCAA +
Preference number: 3 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGFPLTH*QGSDNQ
Trigger: TTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAAA...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
3UTR CCA 72 bp ATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATaGAAATTCATGCCCAGGTACTTGTATTGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: IEWLFPVPSESK*KFMPRYLYCPQ
Trigger: CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp GACGCAATGAGTCATTACACTTACGTATGGGAGTCATACCTAGTTTTTCCTCTATTCACACTGTCTAGTTaGCACACAGCAGAACGATAC +
Preference number: 3 (lower is better)
Translates to: DAMSHYTYVWESYLVFPLFTLSS*HTAERY
Trigger: GTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAA...TAGAGGAAAAACTAGGTATGACTCCCATACGTAAGTGTAATGACTCATTGCGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp GTACTTTTCTTCAGGATTAATAAATGCCATGTGCCAGTTTTACAGTCACTGCCACTGTCGTCTCAACCTTaGGTGAATGACGCAATGAGT +
Preference number: 3 (lower is better)
Translates to: VLFFRINKCHVPVLQSLPLSSQP*VNDAMS
Trigger: ACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG...TGGCAGTGACTGTAAAACTGGCACATGGCATTTATTAATCCTGAAGAAAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
3UTR-3UTR CAA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGGGTTATAATCCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 3 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMGYNPI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGGATTATAACC...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp AGTCTTCTTGTAAATAGAATCAAGGGGCAACACCTGCTGACGACCTTGGGTTTCGGTTATAATCCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 3 (lower is better)
Translates to: SLLVNRIKGQHLLTTLGFGYNPI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGGATTATAACC...GAAACCCAAGGTCGTCAGCAGGTGTTGCCCCTTGATTCTATTTACAAGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp TTGATTTTGGAACTTAATCTTGAATTTTGTCTCTCACGTTGCTGGCTACCCTCATTCTCCGAGTGGGACTaGATGGTAACTATAACTGGG +
Preference number: 3 (lower is better)
Translates to: LILELNLEFCLSRCWLPSFSEWD*MVTITG
Trigger: CCCAGTTATAGTTACCATCAAGTCCCACTCGGAGAA...TGAGGGTAGCCAGCAACGTGAGAGACAAAATTCAAGATTAAGTTCCAAAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR-3UTR CAA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTTGTAGCAAGTGTTCTTaGTTAATCTCAGGAGTCCAA +
Preference number: 3 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSCSKCS*LISGVQ
Trigger: TTGGACTCCTGAGATTAACAAAGAACACTTGCTACA...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR GCA 72 bp TTGCAGATCCTGTTAAAATACTGGTTCCAGAACTACTaGAATCTACAACATAGACTGGAAGGTTTGGAGCAC +
Preference number: 3 (lower is better)
Translates to: LQILLKYWFQNY*NLQHRLEGLEH
Trigger: GTGCTCCAAACCTTCCAGTCTATGTTGTAGATTGCAGTAGTTCTGGAACCAGTATTTTAACAGGATCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp TATAATCTAATGTCTAAGGACTCCAAATATTGGTACGGGGTGAGTATCCCTAATGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 3 (lower is better)
Translates to: YNLMSKDSKYWYGVSIPNAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...ATTAGGGATACTCACCCCGTACCAATATTTGGAGTCCTTAGACATTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
3UTR-3UTR CAA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACACATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAA +
Preference number: 3 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETHKIEW*FPVPSE
Trigger: TTCAGATGGGACTGGAAACAACCATTCAATTTTATG...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp TTCCTCATTAGAGCCTTTAATGGTGGCTATTATAGTGCCAACCAAATCAATTCCTTCACACTGTCTAGTTaGCACACAGCAGAACGATAC +
Preference number: 3 (lower is better)
Translates to: FLIRAFNGGYYSANQINSFTLSS*HTAERY
Trigger: GTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAA...GGAATTGATTTGGTTGGCACTATAATAGCCACCATTAAAGGCTCTAATGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp CAGCTCTATCATCTTCAATTTGTGCTAGATGTGCAATCTTTCCCAAAACATCTCTTCACACTGTCTAGTTaGCACACAGCAGAACGATAC +
Preference number: 3 (lower is better)
Translates to: QLYHLQFVLDVQSFPKHLFTLSS*HTAERY
Trigger: GTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAA...GAGATGTTTTGGGAAAGATTGCACATCTAGCACAAATTGAAGATGATAGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTTTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 3 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp AATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAACATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAA +
Preference number: 3 (lower is better)
Translates to: NTQSGKSPSWSSETEMQKHKIEW*FPVPSE
Trigger: TTCAGATGGGACTGGAAACAACCATTCAATTTTATG...TTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp ATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGCATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAA +
Preference number: 3 (lower is better)
Translates to: IEWLFPVPSESKWKFMPRHKIEW*FPVPSE
Trigger: TTCAGATGGGACTGGAAACAACCATTCAATTTTATG...CCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
3UTR-3UTR CAA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGCAGGTCCCAACCATTTaGAATAAGGGATACTCAACC +
Preference number: 3 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMQVPTI*NKGYST
Trigger: GGTTGAGTATCCCTTATTCAAAATGGTTGGGACCTG...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
3UTR CCA 72 bp TGTCCTTCTACACTGAATATTTGTAGTCTTGCAACATaGCTACTGGGAAGCAACTTAATAGTCTTCTCCACA +
Preference number: 3 (lower is better)
Translates to: CPSTLNICSLAT*LLGSNLIVFST
Trigger: TGTGGAGAAGACTATTAAGTTGCTTCCCAGTAGCCATGTTGCAAGACTACAAATATTCAGTGTAGAAGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp CCAATAAAAAGTGGGGTATCAGTATCTTCCTCATTAGAGCCTTTAATGGTGGCTGGCATGAGCTTTAAATaGCTAGCTTTTGTAAGACTT +
Preference number: 3 (lower is better)
Translates to: PIKSGVSVSSSLEPLMVAGMSFK*LAFVRL
Trigger: AAGTCTTACAAAAGCTAGCAATTTAAAGCTCATGCC...AGCCACCATTAAAGGCTCTAATGAGGAAGATACTGATACCCCACTTTTTATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR TCA 72 bp AAACGCACTTTCCAAAGACACATGATCATCTTGGAATaGAACCTGGCAATAGCGCATATCTTTTACAGATGT +
Preference number: 3 (lower is better)
Translates to: KRTFQRHMIILE*NLAIAHIFYRC
Trigger: ACATCTGTAAAAGATATGCGCTATTGCCAGGTTTCATTCCAAGATGATCATGTGTCTTTGGAAAGTGCGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp CTCTATCATCTTCAATTTGTGCTAGATGTGCAATCTTTCCCAAAACATCTCCACGGTTATAATCCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 3 (lower is better)
Translates to: LYHLQFVLDVQSFPKHLHGYNPI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGGATTATAACC...GTGGAGATGTTTTGGGAAAGATTGCACATCTAGCACAAATTGAAGATGATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
3UTR-3UTR CAA 90 bp CTCTATCATCTTCAATTTGTGCTAGATGTGCAATCTTTCCCAAAACATCTCCACGGTTGTGCTGTTATGTaGTCTGATTCATCTAAAACT +
Preference number: 3 (lower is better)
Translates to: LYHLQFVLDVQSFPKHLHGCAVM*SDSSKT
Trigger: AGTTTTAGATGAATCAGACAACATAACAGCACAACC...GTGGAGATGTTTTGGGAAAGATTGCACATCTAGCACAAATTGAAGATGATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR CCA 72 bp CCAAGTAAAACAAAGATCCTTATTTCCAGGAGGACCTaGAATAAATTTGATGCCTCTTACACTTATACTCTG +
Preference number: 3 (lower is better)
Translates to: PSKTKILISRRT*NKFDASYTYTL
Trigger: CAGAGTATAAGTGTAAGAGGCATCAAATTTATTCCAGGTCCTCCTGGAAATAAGGATCTTTGTTTTACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
3UTR-3UTR CAA 90 bp ATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAACATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAA +
Preference number: 3 (lower is better)
Translates to: ICKVVTTKGHNVWNNSSKHKIEW*FPVPSE
Trigger: TTCAGATGGGACTGGAAACAACCATTCAATTTTATG...TTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
3UTR GCA 72 bp ATGAAGTATCTTAGTGAGTATTTTGTCAGTCACTGTTaGTGGGCATTCAATGAATTTTATTCATCCCTAGGA +
Preference number: 3 (lower is better)
Translates to: MKYLSEYFVSHC*WAFNEFYSSLG
Trigger: TCCTAGGGATGAATAAAATTCATTGAATGCCCAGCAACAGTGACTGACAAAATACTCACTAAGATACTTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR GCA 72 bp AGCTTTTGTAAGACTTATTTTAACATGTTGTACCGGTaGTGGATTATCCCACTGATCACAAAGTTGAACAAT +
Preference number: 3 (lower is better)
Translates to: SFCKTYFNMLYR*WIIPLITKLNN
Trigger: ATTGTTCAACTTTGTGATCAGTGGGATAATCCAGCACCGGTACAACATGTTAAAATAAGTCTTACAAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR GCA 90 bp AGATGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCAACGCGAGCCTCACGGTaGGACCCGCGACCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: RCRKQGILTETNGLFSLSTRASR*DPRPAP
Trigger: CGGCGCTGGTCGCGGGTCGCACCGTGAGGCTCGCGT...TGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGAAAGACAGCGACGCCTaGCGCCGCCGGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQKDSDA*RRRAQG
Trigger: GCCCTGAGCCCGGCGGCGGCAGGCGTCGCTGTCTTT...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp GTACTTTTCTTCAGGATTAATAAATGCCATGTGCCAGTTTTACAGTCACTGCCAGCGGCCCGCCACTCCTaGGGAGAAGGGGACGCGCGG +
Preference number: 4 (lower is better)
Translates to: VLFFRINKCHVPVLQSLPAARHS*GEGDAR
Trigger: CCGCGCGTCCCCTTCTCCTCAGGAGTGGCGGGCCGC...TGGCAGTGACTGTAAAACTGGCACATGGCATTTATTAATCCTGAAGAAAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGCCGCCGTCCGCCGCTaGCATATTGGGGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQAAVRR*HIGEKE
Trigger: CTCCTTTTCCCCAATATGGCAGCGGCGGACGGCGGC...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCAGGGGCAACACCTGCTaGCGACCTTGGGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLRGNTC*RPWVSS
Trigger: TGATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCT...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTAAGTACACCGTCCTGTaGCCGACGCCTCCGCCATCC +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGKYTVL*PTPPPS
Trigger: GGATGGCGGAGGCGTCGGCCACAGGACGGTGTACTT...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCGGCAGGAAGACTGCTTaGACCCAGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLGRKTA*TQEFKT
Trigger: AGTCTTGAACTCCTGGGTTCAAGCAGTCTTCCTGCC...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTAGGGGCAACACCTGCTaGCGACCTTGGGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSRGNTC*RPWVSS
Trigger: TGATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCT...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGAGGGGCAACACCTGCTaGCGACCTTGGGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQRGNTC*RPWVSS
Trigger: TGATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCT...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GTACTTTTCTTCAGGATTAATAAATGCCATGTGCCAGTTTTACAGTCACTGCCAACGCGCTCCTGCCCGTaGACCACGTCACTTCCGCGG +
Preference number: 4 (lower is better)
Translates to: VLFFRINKCHVPVLQSLPTRSCP*TTSLPR
Trigger: CCGCGGAAGTGACGTGGTGCACGGGCAGGAGCGCGT...TGGCAGTGACTGTAAAACTGGCACATGGCATTTATTAATCCTGAAGAAAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp AGATGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCAATTCAAACGCGCTCCTaGCCGTGCACCACGTCACTT +
Preference number: 4 (lower is better)
Translates to: RCRKQGILTETNGLFSLSIQTRS*PCTTSL
Trigger: AAGTGACGTGGTGCACGGGCAGGAGCGCGTTTGAAT...TGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp AATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGGATGTTGGGCCGATTAAGCCCAGGAGCTTaGGACCAGCCTGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: NQRHGSTGFALNMWMLGRLSPGA*DQPGQH
Trigger: GTGTTGACCAGGCTGGTCTCAAGCTCCTGGGCTTAA...TCGGCCCAACATCCACATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR GCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCACAGATGTTGGTACTTaGACATCAGGAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLTDVGT*TSGSRP
Trigger: GGGTCTGCTTCCTGATGTGCAAGTACCAACATCTGT...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGTCCAGGACTACTTTCTaGCAGCACCAGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMSRTTF*QHQTLG
Trigger: GCCCAGAGTCTGGTGCTGGCAGAAAGTAGTCCTGGA...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645355.1
CDS-3UTR TCA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTCGTCAGTGGTTAGGGTaGCTACACAGTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSRQWLG*LHSPCH
Trigger: GTGACATGGACTGTGTAGTCACCCTAACCACTGACG...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTAGGGGCAACACCTGCTaGCGACCTTGGGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLRGNTC*RPWVSS
Trigger: TGATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCT...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGAGGAGCTTTATTCTaGAGGCCCCCAAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: AQVLVLSPEILSLVSHPLGGALF*RPPNFP
Trigger: TGGAAAGTTTGGGGGCCTTCAGAATAAAGCTCCTCC...AAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp CAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGATCCCATTCTATTGCTaGATATGTTGCCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: QSGKSPSWSSETEMQKAGIPFYC*ICCPGT
Trigger: GGTCCCTGGGCAACATATGCAGCAATAGAATGGGAT...CCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCAACATGTTGTACCGGTaGTGGATTATCCCACTGATC +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLNMLYR*WIIPLI
Trigger: GATCAGTGGGATAATCCAGCACCGGTACAACATGTT...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp TGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTTCCAGGACTACTTTCTaGCAGCACCAGACTCATGAT +
Preference number: 4 (lower is better)
Translates to: CRKQGILTETNGLFSLSPSRTTF*QHQTHD
Trigger: ATCATGAGTCTGGTGCTGGCAGAAAGTAGTCCTGGA...AGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp GCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTCCGCCGCTGCCATATTaGGGAAAAGGAGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: AQVLVLSPEILSLVSHPLPPLPY*GKGEKT
Trigger: TGTCTTTTCTCCTTTTCCCCAATATGGCAGCGGCGG...AAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTTGTTTCTGCATTTGCTaGGGGTCGGTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGCFCIC*GSVPTG
Trigger: ACCAGTGGGAACCGACCCCCAGCAAATGCAGAAACA...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
3UTR CAA 72 bp GTAAATAGAATCAAGGGGCAACACCTGCTGACGACCTaGGGTTTCATCATAGATACGACGTGCAGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: VNRIKGQHLLTT*GFIIDTTCSVS
Trigger: ACTGACGCTGCACGTCGTATCTATGATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCTTGATTCTATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGGAAATGCCAAGTGTCTaGCACACACACGCGCGAAAT +
Preference number: 4 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLEMPSV*HTHARN
Trigger: ATTTCGCGCGTGTGTGTGTCAGACACTTGGCATTTC...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCACTAACTTCACAGGTTaGTTAGGCAGGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLTNFTG*LGRTST
Trigger: AGTTGAAGTCCTGCCTAATCAACCTGTGAAGTTAGT...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTGTAATCCCAGTACTTTaGGAGGCCAAGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSVIPVL*EAKTGR
Trigger: TCTGCCTGTCTTGGCCTCTCAAAGTACTGGGATTAC...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR GCA 90 bp TGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTAACATGTTGTACCGGTaGTGGATTATCCCACTGATC +
Preference number: 4 (lower is better)
Translates to: CRKQGILTETNGLFSLSPNMLYR*WIIPLI
Trigger: GATCAGTGGGATAATCCAGCACCGGTACAACATGTT...AGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCTCACACTGTCTAGTTTaGACACAGCAGAACGATACT +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLSHCLV*TQQNDT
Trigger: AGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACTGTTTCTGCATTTGCTaGGGGTCGGTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHCFCIC*GSVPTG
Trigger: ACCAGTGGGAACCGACCCCCAGCAAATGCAGAAACA...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp TGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAACTGACCTCAAACTCCTaGGCTCAAGCGACACTCTTG +
Preference number: 4 (lower is better)
Translates to: CIVPRNTQSGKSPSWSSELTSNS*AQATLL
Trigger: CAAGAGTGTCGCTTGAGCCCAGGAGTTTGAGGTCAG...TTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR TCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGCTGTCAGTAGTAACTaGTTGACCGACTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETAVSSN*LTDCSR
Trigger: CCTGCTACAGTCGGTCAATCAGTTACTACTGACAGC...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCGGTTCCATTGCAATTTaGACCTCTCCTCCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPGSIAI*TSPPVA
Trigger: TGCTACAGGAGGAGAGGTTCAAATTGCAATGGAACC...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR TCA 90 bp GAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCGTCAGTGGTTAGGGTaGCTACACAGTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: EIHAQVLVLSPEILSLVSRQWLG*LHSPCH
Trigger: GTGACATGGACTGTGTAGTCACCCTAACCACTGACG...ACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp TGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGGGAGGAGCTTTATTCTaGAGGCCCCCAAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: WLFPVPSESKWKFMPRYLGGALF*RPPNFP
Trigger: TGGAAAGTTTGGGGGCCTTCAGAATAAAGCTCCTCC...CAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTGGAGGAGCTTTATTCTaGAGGCCCCCAAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLGGALF*RPPNFP
Trigger: TGGAAAGTTTGGGGGCCTTCAGAATAAAGCTCCTCC...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp TGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTTCAACCTTTGGTGAATaGCGCAATGAGTCATTACAC +
Preference number: 4 (lower is better)
Translates to: CRKQGILTETNGLFSLSPSTFGE*RNESLH
Trigger: GTGTAATGACTCATTGCGTCATTCACCAAAGGTTGA...AGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCGTTTCCAGTCCCATCTaGATCGAAATGGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLVSSPI*IEMEIH
Trigger: ATGAATTTCCATTTCGATTCAGATGGGACTGGAAAC...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GACGCAATGAGTCATTACACTTACGTATGGGAGTCATACCTAGTTTTTCCTCTACTTGTCTTAGCCTCCTaGGTAGCTGGGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: DAMSHYTYVWESYLVFPLLVLAS*VAGNTG
Trigger: GCCTGTGTTCCCAGCTACTCAGGAGGCTAAGACAAG...TAGAGGAAAAACTAGGTATGACTCCCATACGTAAGTGTAATGACTCATTGCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR GCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGACAAAGAAGACAGCTTaGTTGCCCCCAACACCAAAA +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQTKKTA*LPPTPK
Trigger: TTTTGGTGTTGGGGGCAAGCAAGCTGTCTTCTTTGT...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp CAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGGGGAATCTGCAGGTTTaGTTATCATTCTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: QSGKSPSWSSETEMQKAGGNLQV*LSFWLI
Trigger: AATCAGCCAGAATGATAAGCAAACCTGCAGATTCCC...CCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGATCCCATTCTATTGCTaGATATGTTGCCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLIPFYC*ICCPGT
Trigger: GGTCCCTGGGCAACATATGCAGCAATAGAATGGGAT...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCACAGATGTTGGTACTTaGACATCAGGAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPTDVGT*TSGSRP
Trigger: GGGTCTGCTTCCTGATGTGCAAGTACCAACATCTGT...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp TGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTACAACTAAATGTTTCTaGATTTGCTGGGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: CRKQGILTETNGLFSLSPTTKCF*ICWGSV
Trigger: AACCGACCCCCAGCAAATGCAGAAACATTTAGTTGT...AGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTTCCAGGACTACTTTCTaGCAGCACCAGACTCATGAT +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGSRTTF*QHQTHD
Trigger: ATCATGAGTCTGGTGCTGGCAGAAAGTAGTCCTGGA...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGACCAAGGCAGGAAGACTaGTTGAACCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRPRQED*LNPGVQ
Trigger: TTGAACTCCTGGGTTCAAGCAGTCTTCCTGCCTTGG...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CCA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTCCATGGCTTGTTCCTaGAAGCTTTTGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSSMACS*KLLHCF
Trigger: GAAGCAATGCAAAAGCTTCCAGGAACAAGCCATGGA...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACACAACCTGTAGTACCATaGGAGCCAATCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETQPVVP*EPIFPT
Trigger: TGTGGGGAAGATTGGCTCCCATGGTACTACAGGTTG...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
3UTR CAA 72 bp CTGGAGCTCCAAATACCATTCCCCGAAGTTTATCCATaGGAGGAGCTTTATTCTGAAGGCCCCCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: LELQIPFPEVYP*EELYSEGPQTF
Trigger: GAAAGTTTGGGGGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGGAGCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACGGTTCCATTGCAATTTaGACCTCTCCTCCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHGSIAI*TSPPVA
Trigger: TGCTACAGGAGGAGAGGTTCAAATTGCAATGGAACC...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR TCA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTTTCAGGCCAAGTTACTaGCAATCTATCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCFRPSY*QSIREP
Trigger: AGGCTCCCTGATAGATTGTCAGTAACTTGGCCTGAA...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp CCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCATAACTACTTCTCCTTaGAGCTCTTGGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: PEILSLVSHPLGLLKQRCITTSP*SSWPIC
Trigger: ACAGATGGGCCAAGAGCTTCAAGGAGAAGTAGTTAT...GCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGTTGTTTTCAAATTTaGGCTATCAAGTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQGCFQI*AIKSNP
Trigger: GGGGTTGGACTTGATAGCTCAAATTTGAAAACAACC...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGACTAACTTCACAGGTTaGTTAGGCAGGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQTNFTG*LGRTST
Trigger: AGTTGAAGTCCTGCCTAATCAACCTGTGAAGTTAGT...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp TCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTATTCCGTCAGTGGTTAGGGTaGCTACACAGTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: SHCLVCTQQNDTAEEDLFRQWLG*LHSPCH
Trigger: GTGACATGGACTGTGTAGTCACCCTAACCACTGACG...GAATAAATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR TCA 90 bp GGATATATGGTTCTAAGGTTCTTGATAAAAGTGGTAGCCGGGGCTCAAATACAACGTCAGTGGTTAGGGTaGCTACACAGTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: GYMVLRFLIKVVAGAQIQRQWLG*LHSPCH
Trigger: GTGACATGGACTGTGTAGTCACCCTAACCACTGACG...TTGTATTTGAGCCCCGGCTACCACTTTTATCAAGAACCTTAGAACCATATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGGGGCAACACCTGCTaGCGACCTTGGGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSRGNTC*RPWVSS
Trigger: TGATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCT...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp CCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATGGAGGAGCTTTATTCTaGAGGCCCCCAAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: PYSHCLVCTQQNDTAEEDGGALF*RPPNFP
Trigger: TGGAAAGTTTGGGGGCCTTCAGAATAAAGCTCCTCC...ATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCGCAGAACGATACTGCTaGAGAAGATCTATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPAERYC*RRSICS
Trigger: GGAACAAATAGATCTTCTTCAGCAGTATCGTTCTGC...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCCGAAGGTACTCTAATTaGCTGTTAAGATCCTTATTC +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLRRYSN*LLRSLF
Trigger: GAATAAGGATCTTAACAGTCAATTAGAGTACCTTCG...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp CCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTGAAGGCCCCCAAACTTCAACCTTTGGTGAATaGCGCAATGAGTCATTACAC +
Preference number: 4 (lower is better)
Translates to: PFPEVYPLEELYSEGPQTSTFGE*RNESLH
Trigger: GTGTAATGACTCATTGCGTCATTCACCAAAGGTTGA...AGTTTGGGGGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCCCCAATTTAGTGCTATaGTTAGAACATCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLPNLVL*LEHLHS
Trigger: GCTATGAAGATGTTCTAATCATAGCACTAAATTGGG...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645355.1
CDS-3UTR GCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCGTTGCCCAGGGACCTTaGTTTTTAGAAGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPVAQGP*FLEGRS
Trigger: TGATCTTCCTTCTAAAAAGCAAGGTCCCTGGGCAAC...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGCTTGACCAGCTGTCCTaGTTTGTATATCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQLDQLS*FVYLSI
Trigger: GATGGAAAGATATACAAAGCAGGACAGCTGGTCAAG...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp CAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGTGGTTCCAGAACTACTaGAATCTACAACATAGACTG +
Preference number: 4 (lower is better)
Translates to: QSGKSPSWSSETEMQKAGWFQNY*NLQHRL
Trigger: CAGTCTATGTTGTAGATTGCAGTAGTTCTGGAACCA...CCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAGTCTTCTCCACAGGTaGCACATCTTTACAACTAGG +
Preference number: 4 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQSLLHR*HIFTTR
Trigger: CCTAGTTGTAAAGATGTGGCACCTGTGGAGAAGACT...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp CCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGTCTTCTCCACAGGTaGCACATCTTTACAACTAGG +
Preference number: 4 (lower is better)
Translates to: PEILSLVSHPLGLLKQRCSLLHR*HIFTTR
Trigger: CCTAGTTGTAAAGATGTGGCACCTGTGGAGAAGACT...GCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGAAATGTTTCTGCATTTaGTGGGGGTCGGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKKCFCI*WGSVPT
Trigger: AGTGGGAACCGACCCCCAGCAAATGCAGAAACATTT...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp TGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAATCCAGGACTACTTTCTaGCAGCACCAGACTCATGAT +
Preference number: 4 (lower is better)
Translates to: CIVPRNTQSGKSPSWSSESRTTF*QHQTHD
Trigger: ATCATGAGTCTGGTGCTGGCAGAAAGTAGTCCTGGA...TTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGCTTTCTTTTCAGAAGTaGTTCAATGTGTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQLSFQK*FNVWHL
Trigger: CAGGTGCCACACATTGAAGCACTTCTGAAAAGAAAG...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp AGATGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCAATGTCACTTGCCAGATaGCAAGAAATAACCATCGCA +
Preference number: 4 (lower is better)
Translates to: RCRKQGILTETNGLFSLSMSLAR*QEITIA
Trigger: TGCGATGGTTATTTCTTGGCATCTGGCAAGTGACAT...TGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGTCACACTGTCTAGTTTaGACACAGCAGAACGATACT +
Preference number: 4 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQSHCLV*TQQNDT
Trigger: AGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCCTCATATCCGGAGTaGGAAGGTACTCTAATTGAC +
Preference number: 4 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSSSYPE*EGTLID
Trigger: GTCAATTAGAGTACCTTCGCACTCCGGATATGAGGA...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTCTGGGAACACAGGCATaGACTATTTGTTCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCLGTQA*TICSPK
Trigger: CTTAGGGGAACAAATAGTGCATGCCTGTGTTCCCAG...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTTCCATGGCTTGTTCCTaGAAGCTTTTGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGSMACS*KLLHCF
Trigger: GAAGCAATGCAAAAGCTTCCAGGAACAAGCCATGGA...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGATGTTGTACCGGTGCTaGATTATCCCACTGATCACA +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMMLYRC*IIPLIT
Trigger: TGTGATCAGTGGGATAATCCAGCACCGGTACAACAT...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCCGAAGTTTATCCATTaGAGGAGCTTTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CRKQGILTETNGLFSLSPPKFIH*RSFILK
Trigger: CTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGG...AGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTACACTGTTTTGGAACTaGAGCTCCAAATACCATTCC +
Preference number: 4 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSTLFWN*SSKYHS
Trigger: GGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGT...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCGAGTGGGACTTGATGGTAACTATAACTGGGATAGGGCAAATCAACGTCATGGGCAAATCAACGTCATaGGTCCACAGGTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SEWDLMVTITGIGQINVMGKSTS*VHRFCF
Trigger: AAAGCAAAACCTGTGGACCCATGACGTTGATTTGCC...CATGACGTTGATTTGCCCTATCCCAGTTATAGTTACCATCAAGTCCCACTCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR TCA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTTTGCCTTGTGAATTTTaGCAACCTATACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCLPCEF*QPIHGP
Trigger: TGGGCCGTGTATAGGTTGTCAAAATTCACAAGGCAA...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp AATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGAAAGCACAAGCTCGTaGACATCTTGGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: NTQSGKSPSWSSETEMQKESTSS*TSWESA
Trigger: TGCAGATTCCCAAGATGTTCACGAGCTTGTGCTTTC...TTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTTCAGGCCAAGTTACTaGCAATCTATCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVFRPSY*QSIREP
Trigger: AGGCTCCCTGATAGATTGTCAGTAACTTGGCCTGAA...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp CCCAAACTTTCCATTACTTCGAATTCGATCTCCATCTCTGGTCAGCAGTGTAGGCCTCATCCTGATGTTTaGTCTGAATTGCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: PKLSITSNSISISGQQCRPHPDV*SELPFV
Trigger: GACAAAAGGCAATTCAGATCAAACATCAGGATGAGG...CCTACACTGCTGACCAGAGATGGAGATCGAATTCGAAGTAATGGAAAGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR TCA 90 bp CTTCTTGTAAATAGAATCAAGGGGCAACACCTGCTGACGACCTTGGGTTTCATCATGATCATCTTGGAATaGAACCTGGCAATAGCGCAT +
Preference number: 4 (lower is better)
Translates to: LLVNRIKGQHLLTTLGFIMIILE*NLAIAH
Trigger: ATGCGCTATTGCCAGGTTTCATTCCAAGATGATCAT...GATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCTTGATTCTATTTACAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR TCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAATAACTACTTCTCCTTaGAGCTCTTGGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETITTSP*SSWPIC
Trigger: ACAGATGGGCCAAGAGCTTCAAGGAGAAGTAGTTAT...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAATAACTACTTCTCCTTaGAGCTCTTGGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRITTSP*SSWPIC
Trigger: ACAGATGGGCCAAGAGCTTCAAGGAGAAGTAGTTAT...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTACTAACTTCACAGGTTaGTTAGGCAGGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGTNFTG*LGRTST
Trigger: AGTTGAAGTCCTGCCTAATCAACCTGTGAAGTTAGT...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCCGTCAGTGGTTAGGGTaGCTACACAGTCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSRQWLG*LHSPCH
Trigger: GTGACATGGACTGTGTAGTCACCCTAACCACTGACG...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGGCAGAACGATACTGCTaGAGAAGATCTATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQAERYC*RRSICS
Trigger: GGAACAAATAGATCTTCTTCAGCAGTATCGTTCTGC...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp AATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGGATGTTGGGCCGATCAACCTTTGGTGAATaGCGCAATGAGTCATTACAC +
Preference number: 4 (lower is better)
Translates to: NQRHGSTGFALNMWMLGRSTFGE*RNESLH
Trigger: GTGTAATGACTCATTGCGTCATTCACCAAAGGTTGA...TCGGCCCAACATCCACATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR TCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCTCAACCTTTGGTGAATaGCGCAATGAGTCATTACAC +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPSTFGE*RNESLH
Trigger: GTGTAATGACTCATTGCGTCATTCACCAAAGGTTGA...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp AGATGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCAGTTTCCAGTCCCATCTaGATCGAAATGGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: RCRKQGILTETNGLFSLSVSSPI*IEMEIH
Trigger: ATGAATTTCCATTTCGATTCAGATGGGACTGGAAAC...TGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTATCACTATTTAAACTaGGTGGCACTGGTACTGGAC +
Preference number: 4 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSYHYLN*VALVLD
Trigger: GTCCAGTACCAGTGCCACGCAGTTTAAATAGTGATA...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp TGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAGTAGCATTCAATTGGTaGAAGCCCTCTCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: CIVPRNTQSGKSPSWSSEVAFNW*KPSLLR
Trigger: CCTAAGAAGAGAGGGCTTGCACCAATTGAATGCTAC...TTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACGTTGCCCAGGGACCTTaGTTTTTAGAAGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHVAQGP*FLEGRS
Trigger: TGATCTTCCTTCTAAAAAGCAAGGTCCCTGGGCAAC...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCTATTGCTGCATATGTTaGCCAGGGACCTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPYCCIC*PGTLLF
Trigger: AAAAAGCAAGGTCCCTGGGCAACATATGCAGCAATA...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp ATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTGCCTGAGGTTCCATTaGAATTTGAACCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IEWLFPVPSESKWKFMPRCLRFH*NLNLSS
Trigger: GGAGGAGAGGTTCAAATTGCAATGGAACCTCAGGCA...CCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTAACATGTTGTACCGGTaGTGGATTATCCCACTGATC +
Preference number: 4 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSNMLYR*WIIPLI
Trigger: GATCAGTGGGATAATCCAGCACCGGTACAACATGTT...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCAAATGTTTCTGCATTTaGTGGGGGTCGGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVKCFCI*WGSVPT
Trigger: AGTGGGAACCGACCCCCAGCAAATGCAGAAACATTT...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp TCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGTCAAAATGTTTCTGCATTTaGTGGGGGTCGGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SQPLVNDAMSHYTYVWESKCFCI*WGSVPT
Trigger: AGTGGGAACCGACCCCCAGCAAATGCAGAAACATTT...TGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGACAACTAAATGTTTCTaGATTTGCTGGGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLTTKCF*ICWGSV
Trigger: AACCGACCCCCAGCAAATGCAGAAACATTTAGTTGT...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGATGTCACTTGCCAGATaGCAAGAAATAACCATCGCA +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMMSLAR*QEITIA
Trigger: TGCGATGGTTATTTCTTGGCATCTGGCAAGTGACAT...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGATGTCACTTGCCAGATaGCAAGAAATAACCATCGCA +
Preference number: 4 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQMSLAR*QEITIA
Trigger: TGCGATGGTTATTTCTTGGCATCTGGCAAGTGACAT...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTATGTCACTTGCCAGATaGCAAGAAATAACCATCGCA +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGMSLAR*QEITIA
Trigger: TGCGATGGTTATTTCTTGGCATCTGGCAAGTGACAT...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGACAGTCCATGTCACTTaGCAGATGCCAAGAAATAAC +
Preference number: 4 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQTVHVT*QMPRNN
Trigger: GTTATTTCTTGGCATCTGGCAAGTGACATGGACTGT...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTACAGTCCATGTCACTTaGCAGATGCCAAGAAATAAC +
Preference number: 4 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSTVHVT*QMPRNN
Trigger: GTTATTTCTTGGCATCTGGCAAGTGACATGGACTGT...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCTCACACTGTCTAGTTTaGACACAGCAGAACGATACT +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPSHCLV*TQQNDT
Trigger: AGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCTTCAGGATTAATAAATaGCATGTGCCAGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLFRINK*HVPVLQ
Trigger: CTGTAAAACTGGCACATGGCATTTATTAATCCTGAA...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp CAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGGTTTGCTTATCATTCTaGCTGATTGTCCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: QSGKSPSWSSETEMQKAGVCLSF*LIVQQR
Trigger: TCTTTGTTGGACAATCAGCCAGAATGATAAGCAAAC...CCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGATCCATGGCTTGTTCCTaGAAGCTTTTGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRSMACS*KLLHCF
Trigger: GAAGCAATGCAAAAGCTTCCAGGAACAAGCCATGGA...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTCAGAGGGATATTAAATaGAACTCCAACACGAAAAGG +
Preference number: 4 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSQRDIK*NSNTKR
Trigger: CCTTTTCGTGTTGGAGTTCCATTTAATATCCCTCTG...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CCA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTGTAGTCTTGCAACATaGCTACTGGGAAGCAACTTA +
Preference number: 4 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSCSLAT*LLGSNL
Trigger: TAAGTTGCTTCCCAGTAGCCATGTTGCAAGACTACA...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp GGTCGGTTCCCACTGGTAGACAGCTTCCACATTTTCATGGAAATACGTGCTGGAATCTTTTACAGATGTTaGTACTTGCACATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRFPLVDSFHIFMEIRAGIFYRC*YLHIRK
Trigger: CTTCCTGATGTGCAAGTACCAACATCTGTAAAAGAT...TCCAGCACGTATTTCCATGAAAATGTGGAAGCTGTCTACCAGTGGGAACCGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTATGTTGTACCGGTGCTaGATTATCCCACTGATCACA +
Preference number: 4 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSMLYRC*IIPLIT
Trigger: TGTGATCAGTGGGATAATCCAGCACCGGTACAACAT...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTATGTTTCTGCATTTGCTaGGGGTCGGTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: YSHCLVCTQQNDTAEEDLCFCIC*GSVPTG
Trigger: ACCAGTGGGAACCGACCCCCAGCAAATGCAGAAACA...TAAATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CCA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCATCATAAAACCAAACTaGATACAATATGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: AESRAFLLRPMASSLCHLIIKPN*IQYVPT
Trigger: AGTGGGGACATATTGTATCCAGTTTGGTTTTATGAT...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp TCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGAAGTGCTTCAATGTGTaGCACCTGTTGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SSQPLVNDAMSHYTYVWEKCFNV*HLLCCR
Trigger: CCTACAACACAACAGGTGCCACACATTGAAGCACTT...CTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGGTCTCGAGCAAAGACTaGATCTCCAATGGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQVSSKD*ISNGFK
Trigger: TTTAAACCCATTGGAGATCCAGTCTTTGCTCGAGAC...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp GCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTCCGAAGTTTATCCATTaGAGGAGCTTTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AQVLVLSPEILSLVSHPLPKFIH*RSFILK
Trigger: CTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGG...AAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGACACTGTTTTGGAACTaGAGCTCCAAATACCATTCC +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMTLFWN*SSKYHS
Trigger: GGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGT...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp CCCAAACTTTCCATTACTTCGAATTCGATCTCCATCTCTGGTCAGCAGTGTAGGGATCAGACACTGTTTTaGAACTGGAGCTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: PKLSITSNSISISGQQCRDQTLF*NWSSKY
Trigger: GTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATC...CCTACACTGCTGACCAGAGATGGAGATCGAATTCGAAGTAATGGAAAGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp GGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGGATGTTGGGTCTTTTAGGAGGAACTaGACAATCTGTCGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: GKSTSWVHRFCFKHVDVGSFRRN*TICRLN
Trigger: GTTGAGACGACAGATTGTCCAGTTCCTCCTAAAAGA...CCCAACATCCACATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR CCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCCATCTGAATCGAAATaGAAATTCATGCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGPSESK*KFMPRY
Trigger: GTACCTGGGCATGAATTTCCATTTCGATTCAGATGG...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCCATCTGAATCGAAATaGAAATTCATGCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMPSESK*KFMPRY
Trigger: GTACCTGGGCATGAATTTCCATTTCGATTCAGATGG...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TGGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGGAGTCTCTTCTCCGAGTaGGACTTGATGGTAACTATA +
Preference number: 4 (lower is better)
Translates to: WDRANQRHGSTGFALNMWSLFSE*DLMVTI
Trigger: TATAGTTACCATCAAGTCCCACTCGGAGAAGAGACT...CCACATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR TCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACATCAGTAGTAACTGATTaGCCGACTGTAGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETSVVTD*PTVAGI
Trigger: TATACCTGCTACAGTCGGTCAATCAGTTACTACTGA...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGTCACCTTGCCTTGTaGATTTTGACAACCTATACA +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPSHLAL*ILTTYT
Trigger: TGTATAGGTTGTCAAAATTCACAAGGCAAGGTGACT...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGACCTCATCCTGATGTTTaGTCTGAATTGCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRPHPDV*SELPFV
Trigger: GACAAAAGGCAATTCAGATCAAACATCAGGATGAGG...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTATGATCATCTTGGAATaGAACCTGGCAATAGCGCAT +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLMIILE*NLAIAH
Trigger: ATGCGCTATTGCCAGGTTTCATTCCAAGATGATCAT...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGGTTGTTTTCAAATTTaGGCTATCAAGTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSGCFQI*AIKSNP
Trigger: GGGGTTGGACTTGATAGCTCAAATTTGAAAACAACC...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp GCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGAATTACTTTATCCCTaGAATAGAAGCAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: AQVLVLSPEILSLVSHPLELLYP*NRSSHL
Trigger: AAGATGGCTGCTTCTATTTCAGGGATAAAGTAATTC...AAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTACTAACTTCACAGGTTaGTTAGGCAGGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSTNFTG*LGRTST
Trigger: AGTTGAAGTCCTGCCTAATCAACCTGTGAAGTTAGT...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp ATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAAGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ICKVVTTKGHNVWNNSSKAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...TTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTGCAGGGCATTCTTACTaGGACCAATGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSAGHSY*DQWPLL
Trigger: GAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGC...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp TTTTGGAACTGGAGCTCCAAATACCATTCCCCGAAGTTTATCCATTGGAGGAGCGTTTCCAGTCCCATCTaGATCGAAATGGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: FWNWSSKYHSPKFIHWRSVSSPI*IEMEIH
Trigger: ATGAATTTCCATTTCGATTCAGATGGGACTGGAAAC...GCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGGAGCTCCAGTTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCCACAAGTTCACTCATTaGTTTAATGTTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPHKFTH*FNVVLG
Trigger: ACCCAGAACAACATTAAATCAATGAGTGAACTTGTG...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp AATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGGATGTTGGGCCGATTGCTGGGCATTCAATaGATTTTATTCATCCCTAGG +
Preference number: 4 (lower is better)
Translates to: NQRHGSTGFALNMWMLGRLLGIQ*ILFIPR
Trigger: CCTAGGGATGAATAAAATTCATTGAATGCCCAGCAA...TCGGCCCAACATCCACATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR GCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCTCCATTATCTATCACTaGAACAGCAGGTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPSIIYH*NSRFSL
Trigger: CAAGGAAAACCTGCTGTTGCAGTGATAGATAATGGA...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAAGTCTTCTCCACAGGTaGCACATCTTTACAACTAGG +
Preference number: 4 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEESLLHR*HIFTTR
Trigger: CCTAGTTGTAAAGATGTGGCACCTGTGGAGAAGACT...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTACAACTAAATGTTTCTaGATTTGCTGGGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLTTKCF*ICWGSV
Trigger: AACCGACCCCCAGCAAATGCAGAAACATTTAGTTGT...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp TGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAACTTTCTTTTCAGAAGTaGTTCAATGTGTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: CIVPRNTQSGKSPSWSSELSFQK*FNVWHL
Trigger: CAGGTGCCACACATTGAAGCACTTCTGAAAAGAAAG...TTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGACTTTCTTTTCAGAAGTaGTTCAATGTGTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRLSFQK*FNVWHL
Trigger: CAGGTGCCACACATTGAAGCACTTCTGAAAAGAAAG...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp CTGTCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGATGTCACTTGCCAGATaGCAAGAAATAACCATCGCA +
Preference number: 4 (lower is better)
Translates to: LSSQPLVNDAMSHYTYVWMSLAR*QEITIA
Trigger: TGCGATGGTTATTTCTTGGCATCTGGCAAGTGACAT...CCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp TGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGACAGTCCATGTCACTTaGCAGATGCCAAGAAATAAC +
Preference number: 4 (lower is better)
Translates to: WLFPVPSESKWKFMPRYLTVHVT*QMPRNN
Trigger: GTTATTTCTTGGCATCTGGCAAGTGACATGGACTGT...CAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTTCCTCATATCCGGAGTaGGAAGGTACTCTAATTGAC +
Preference number: 4 (lower is better)
Translates to: EIHAQVLVLSPEILSLVSSSYPE*EGTLID
Trigger: GTCAATTAGAGTACCTTCGCACTCCGGATATGAGGA...ACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTTCCTCTTACACATTTaGAAGGTAGTGACAACCAAA +
Preference number: 4 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSFLLHI*KVVTTK
Trigger: TTTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAA...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTATTGTAGCATTCAATTaGTGCAAGCCCTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGIVAFN*CKPSLL
Trigger: AAGAAGAGAGGGCTTGCACCAATTGAATGCTACAAT...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CCA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGATCCAGCTTTGCAATTaGCACAGTTCTTACTTCATC +
Preference number: 4 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLIQLCN*HSSYFI
Trigger: GATGAAGTAAGAACTGTGCCAATTGCAAAGCTGGAT...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CCA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTCAGTTACTAGTTGACTaGTATGACCAAATTCATCCT +
Preference number: 4 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSQLLVD*YDQIHP
Trigger: AGGATGAATTTGGTCATACCAGTCAACTAGTAACTG...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CCA 90 bp CAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGATCCTGTTAAAATACTaGTTCCAGAACTACTGCAAT +
Preference number: 4 (lower is better)
Translates to: QSGKSPSWSSETEMQKAGILLKY*FQNYCN
Trigger: ATTGCAGTAGTTCTGGAACCAGTATTTTAACAGGAT...CCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTTGTAGTCTTGCAACATaGCTACTGGGAAGCAACTTA +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLCSLAT*LLGSNL
Trigger: TAAGTTGCTTCCCAGTAGCCATGTTGCAAGACTACA...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTATCTTTTACAGATGTTaGTACTTGCACATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSIFYRC*YLHIRK
Trigger: CTTCCTGATGTGCAAGTACCAACATCTGTAAAAGAT...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TTCCCACTGGTAGACAGCTTCCACATTTTCATGGAAATACGTGCTGGATTAATGATGTTGTACCGGTGCTaGATTATCCCACTGATCACA +
Preference number: 4 (lower is better)
Translates to: FPLVDSFHIFMEIRAGLMMLYRC*IIPLIT
Trigger: TGTGATCAGTGGGATAATCCAGCACCGGTACAACAT...CATTAATCCAGCACGTATTTCCATGAAAATGTGGAAGCTGTCTACCAGTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CCA 90 bp GGTCGGTTCCCACTGGTAGACAGCTTCCACATTTTCATGGAAATACGTGCTGGAATCATAAAACCAAACTaGATACAATATGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: GRFPLVDSFHIFMEIRAGIIKPN*IQYVPT
Trigger: AGTGGGGACATATTGTATCCAGTTTGGTTTTATGAT...TCCAGCACGTATTTCCATGAAAATGTGGAAGCTGTCTACCAGTGGGAACCGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CCA 90 bp GCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTTTTCCCAATAAAAAGTaGGGTATCAGTATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AQVLVLSPEILSLVSHPLFPNKK*GISIFL
Trigger: GAGGAAGATACTGATACCCCACTTTTTATTGGGAAA...AAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTTTCCCAATAAAAAGTaGGGTATCAGTATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSFPNKK*GISIFL
Trigger: GAGGAAGATACTGATACCCCACTTTTTATTGGGAAA...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp TCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGTCAAAGTGCTTCAATGTGTaGCACCTGTTGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SQPLVNDAMSHYTYVWESKCFNV*HLLCCR
Trigger: CCTACAACACAACAGGTGCCACACATTGAAGCACTT...TGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp ATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGAAGTGCTTCAATGTGTaGCACCTGTTGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: IEWLFPVPSESKWKFMPRKCFNV*HLLCCR
Trigger: CCTACAACACAACAGGTGCCACACATTGAAGCACTT...CCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTGTCTCGAGCAAAGACTaGATCTCCAATGGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLVSSKD*ISNGFK
Trigger: TTTAAACCCATTGGAGATCCAGTCTTTGCTCGAGAC...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCAAATACCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTGAAGGCCGTCTCGAGCAAAGACTaGATCTCCAATGGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SKYHSPKFIHWRSFILKAVSSKD*ISNGFK
Trigger: TTTAAACCCATTGGAGATCCAGTCTTTGCTCGAGAC...GGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAGTCTCGAGCAAAGACTaGATCTCCAATGGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRVSSKD*ISNGFK
Trigger: TTTAAACCCATTGGAGATCCAGTCTTTGCTCGAGAC...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp GCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTCTTTTCTATAATGATTaGCCGCATCCAGATTATCCA +
Preference number: 4 (lower is better)
Translates to: AQVLVLSPEILSLVSHPLLFYND*PHPDYP
Trigger: TGGATAATCTGGATGCGGCCAATCATTATAGAAAAG...AAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTACACTGTTTTGGAACTaGAGCTCCAAATACCATTCC +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLTLFWN*SSKYHS
Trigger: GGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGT...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGATCAGACACTGTTTTaGAACTGGAGCTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETDQTLF*NWSSKY
Trigger: GTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATC...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp CAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGCATTACACTTACGTATaGGAGTCATACCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: QSGKSPSWSSETEMQKAGHYTYV*ESYLVF
Trigger: AAAAACTAGGTATGACTCCCATACGTAAGTGTAATG...CCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTTCTTTTAGGAGGAACTaGACAATCTGTCGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCSFRRN*TICRLN
Trigger: GTTGAGACGACAGATTGTCCAGTTCCTCCTAAAAGA...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCAAATACCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTGAAGGCCTCTTTTAGGAGGAACTaGACAATCTGTCGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SKYHSPKFIHWRSFILKASFRRN*TICRLN
Trigger: GTTGAGACGACAGATTGTCCAGTTCCTCCTAAAAGA...GGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACACCATCTGAATCGAAATaGAAATTCATGCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETPSESK*KFMPRY
Trigger: GTACCTGGGCATGAATTTCCATTTCGATTCAGATGG...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAACCATCTGAATCGAAATaGAAATTCATGCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: CIVPRNTQSGKSPSWSSEPSESK*KFMPRY
Trigger: GTACCTGGGCATGAATTTCCATTTCGATTCAGATGG...TTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGCCATCTGAATCGAAATaGAAATTCATGCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKPSESK*KFMPRY
Trigger: GTACCTGGGCATGAATTTCCATTTCGATTCAGATGG...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGTTAAGCAATAAAAATTaGCATGTGGGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLLSNKN*HVGACL
Trigger: CAGGCATGCACCCACATGCCAATTTTTATTGCTTAA...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CCA 90 bp TATAACTGGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACTTTGCTTTAAACATGTaGATGTTGGGCCGAGCATGG +
Preference number: 4 (lower is better)
Translates to: YNWDRANQRHGSTGFALNFALNM*MLGRAW
Trigger: CCATGCTCGGCCCAACATCCACATGTTTAAAGCAAA...GTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR CAA 72 bp ACTGTTTTACCAACAAGTCTCTTCTCCGAGTGGGACTaGATGGTAACTATAACTGGGATAGGGCAAATCAAC +
Preference number: 4 (lower is better)
Translates to: TVLPTSLFSEWD*MVTITGIGQIN
Trigger: GTTGATTTGCCCTATCCCAGTTATAGTTACCATCAAGTCCCACTCGGAGAAGAGACTTGTTGGTAAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
3UTR CAA 72 bp GAAGATCTATTTGTTCCCCTAAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATACCATTCCCCGAAGTT +
Preference number: 4 (lower is better)
Translates to: EDLFVPLRSDTV*ELELQIPFPEV
Trigger: AACTTCGGGGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCTTAGGGGAACAAATAGATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCAACATGAGCTTTaGATTCAAAACTATCAGCTG +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGLQHEL*IQNYQL
Trigger: CAGCTGATAGTTTTGAATTCAAAGCTCATGTTGAAG...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCTTCAGGCCAAGTTACTaGCAATCTATCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSFRPSY*QSIREP
Trigger: AGGCTCCCTGATAGATTGTCAGTAACTTGGCCTGAA...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp TCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGTCAATGATCATCTTGGAATaGAACCTGGCAATAGCGCAT +
Preference number: 4 (lower is better)
Translates to: SQPLVNDAMSHYTYVWESMIILE*NLAIAH
Trigger: ATGCGCTATTGCCAGGTTTCATTCCAAGATGATCAT...TGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGGAATTACTTTATCCCTaGAATAGAAGCAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQELLYP*NRSSHL
Trigger: AAGATGGCTGCTTCTATTTCAGGGATAAAGTAATTC...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGTTTCCATTTCGGAAATaGGGTAGAGATCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQFPFRK*GRDLFQ
Trigger: TTGGAAAAGATCTCTACCTCATTTCCGAAATGGAAA...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTGGAGGAGCTTTATTCTaGAGGCCCCCAAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSGGALF*RPPNFP
Trigger: TGGAAAGTTTGGGGGCCTTCAGAATAAAGCTCCTCC...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp CATGTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATGCAGAACGATACTGCTaGAGAAGATCTATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: HVTCQMPRNNHRSSIIFNAERYC*RRSICS
Trigger: GGAACAAATAGATCTTCTTCAGCAGTATCGTTCTGC...ATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp CTTCTTGTAAATAGAATCAAGGGGCAACACCTGCTGACGACCTTGGGTTTCATCCGAAGGTACTCTAATTaGCTGTTAAGATCCTTATTC +
Preference number: 4 (lower is better)
Translates to: LLVNRIKGQHLLTTLGFIRRYSN*LLRSLF
Trigger: GAATAAGGATCTTAACAGTCAATTAGAGTACCTTCG...GATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCTTGATTCTATTTACAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp AATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGGATGTTGGGCCGACTTTCTCCCTCTCCTTaGTATGATACAGTATTACTA +
Preference number: 4 (lower is better)
Translates to: NQRHGSTGFALNMWMLGRLSPSP*YDTVLL
Trigger: TAGTAATACTGTATCATATCAAGGAGAGGGAGAAAG...TCGGCCCAACATCCACATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR TCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGGACAGGCAGACTGCTTaGGGTCAGGAGTTTGAGATT +
Preference number: 4 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMDRQTA*GQEFEI
Trigger: AATCTCAAACTCCTGACCTCAAGCAGTCTGCCTGTC...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR GCA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGAAGACAGCTTGCTTaGCCCCAACACCAAAATAGG +
Preference number: 4 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSRRQLA*PQHQNR
Trigger: CCTATTTTGGTGTTGGGGGCAAGCAAGCTGTCTTCT...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTTCTATCAGGGAGCCTTaGCATTTCATCTTCTACATA +
Preference number: 4 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSSIREP*HFIFYI
Trigger: TATGTAGAAGATGAAATGGCAAGGCTCCCTGATAGA...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTTGGTTCCAGAACTACTaGAATCTACAACATAGACTG +
Preference number: 4 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSWFQNY*NLQHRL
Trigger: CAGTCTATGTTGTAGATTGCAGTAGTTCTGGAACCA...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCTTTTCTTTTGTAAGTaGTGCCATTTGTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMLFFCK*CHLLLL
Trigger: AAGCAGCAACAAATGGCAGCACTTACAAAAGAAAAG...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp AGTCTTCTTGTAAATAGAATCAAGGGGCAACACCTGCTGACGACCTTGGGTTTCCTTTTCTTTTGTAAGTaGTGCCATTTGTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLLVNRIKGQHLLTTLGFLFFCK*CHLLLL
Trigger: AAGCAGCAACAAATGGCAGCACTTACAAAAGAAAAG...GAAACCCAAGGTCGTCAGCAGGTGTTGCCCCTTGATTCTATTTACAAGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp TCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGTCACTTTCTTTTCAGAAGTaGTTCAATGTGTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: SQPLVNDAMSHYTYVWESLSFQK*FNVWHL
Trigger: CAGGTGCCACACATTGAAGCACTTCTGAAAAGAAAG...TGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp GTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATTTGTCACACTGTCTAGTTTaGACACAGCAGAACGATACT +
Preference number: 4 (lower is better)
Translates to: VTCQMPRNNHRSSIIFNLSHCLV*TQQNDT
Trigger: AGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA...CAAATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGTTCCTCTTACACATTTaGAAGGTAGTGACAACCAAA +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMFLLHI*KVVTTK
Trigger: TTTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAA...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp AATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGGATGTTGGGCCGATTTGTCAGTCACTGTTaGTGGGCATTCAATGAATTT +
Preference number: 4 (lower is better)
Translates to: NQRHGSTGFALNMWMLGRFVSHC*WAFNEF
Trigger: AAATTCATTGAATGCCCAGCAACAGTGACTGACAAA...TCGGCCCAACATCCACATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR CCA 90 bp AATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGTACTGTATGTGTTCTaGTTGTACCCCTGTGATAAC +
Preference number: 4 (lower is better)
Translates to: NTQSGKSPSWSSETEMQKVLYVF*LYPCDN
Trigger: GTTATCACAGGGGTACAACCAGAACACATACAGTAC...TTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGACAGAGGGATATTAAATaGAACTCCAACACGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRQRDIK*NSNTKR
Trigger: CCTTTTCGTGTTGGAGTTCCATTTAATATCCCTCTG...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CCA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCATCCTGTTAAAATACTaGTTCCAGAACTACTGCAAT +
Preference number: 4 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPILLKY*FQNYCN
Trigger: ATTGCAGTAGTTCTGGAACCAGTATTTTAACAGGAT...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTTCCAGGAGGACCTaGAATAAATTTGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCISRRT*NKFDAS
Trigger: AGAGGCATCAAATTTATTCCAGGTCCTCCTGGAAAT...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp ACCTGGAATAAATTTGATGCCTCTTACACTTATACTCTGTGTGTTTTCCTGAAATGTTTCTGCATTTGCTaGGGGTCGGTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: TWNKFDASYTYTLCVFLKCFCIC*GSVPTG
Trigger: ACCAGTGGGAACCGACCCCCAGCAAATGCAGAAACA...TTTCAGGAAAACACACAGAGTATAAGTGTAAGAGGCATCAAATTTATTCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCTTTTCTATAATGATTaGCCGCATCCAGATTATCCA +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMLFYND*PHPDYP
Trigger: TGGATAATCTGGATGCGGCCAATCATTATAGAAAAG...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp ATCAGACACTGTTTTGGAACTGGAGCTCCAAATACCATTCCCCGAAGTTTATCCCCGAAGTTTATCCATTaGAGGAGCTTTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IRHCFGTGAPNTIPRSLSPKFIH*RSFILK
Trigger: CTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGG...GGATAAACTTCGGGGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp TCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGTCAACACTGTTTTGGAACTaGAGCTCCAAATACCATTCC +
Preference number: 4 (lower is better)
Translates to: SQPLVNDAMSHYTYVWESTLFWN*SSKYHS
Trigger: GGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGT...TGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp CATGTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATGATCAGACACTGTTTTaGAACTGGAGCTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: HVTCQMPRNNHRSSIIFNDQTLF*NWSSKY
Trigger: GTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATC...ATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp AATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAATAAAAATTGGCATGTaGGTGCATGCCTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: NTQSGKSPSWSSETEMQKIKIGM*VHACNP
Trigger: GGGATTACAGGCATGCACCCACATGCCAATTTTTAT...TTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320876.11
3UTR CAA 72 bp CCTGCTAAGAAGGATGCATCTTTGTCATATTTAACATaGAGACGAACGGGTTTTTCTGGGTCTGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: PAKKDASLSYLT*RRTGFSGSGRI
Trigger: GATTCTTCCAGACCCAGAAAAACCCGTTCGTCTCAATGTTAAATATGACAAAGATGCATCCTTCTTAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR TCA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACTTTCCATTTCGGAAATaGGGTAGAGATCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHFPFRK*GRDLFQ
Trigger: TTGGAAAAGATCTCTACCTCATTTCCGAAATGGAAA...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GACGCAATGAGTCATTACACTTACGTATGGGAGTCATACCTAGTTTTTCCTCTATCAACCTTTGGTGAATaGCGCAATGAGTCATTACAC +
Preference number: 4 (lower is better)
Translates to: DAMSHYTYVWESYLVFPLSTFGE*RNESLH
Trigger: GTGTAATGACTCATTGCGTCATTCACCAAAGGTTGA...TAGAGGAAAAACTAGGTATGACTCCCATACGTAAGTGTAATGACTCATTGCGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGAACATCTTGGGAATCTaGAGGTTTGCTTATCATTCT +
Preference number: 4 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKNILGI*RFAYHS
Trigger: AGAATGATAAGCAAACCTGCAGATTCCCAAGATGTT...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTGCCTGAGGTTCCATTaGAATTTGAACCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMCLRFH*NLNLSS
Trigger: GGAGGAGAGGTTCAAATTGCAATGGAACCTCAGGCA...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp ATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTCTATCAGGGAGCCTTaGCATTTCATCTTCTACATA +
Preference number: 4 (lower is better)
Translates to: IEWLFPVPSESKWKFMPRSIREP*HFIFYI
Trigger: TATGTAGAAGATGAAATGGCAAGGCTCCCTGATAGA...CCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTTCCAGAACTACTaGAATCTACAACATAGACTG +
Preference number: 4 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVWFQNY*NLQHRL
Trigger: CAGTCTATGTTGTAGATTGCAGTAGTTCTGGAACCA...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGAGGTATTTCAATTCTTaGTTTAAGCGTCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMRYFNS*FKRLVF
Trigger: AAAGACCAGACGCTTAAAGCAAGAATTGAAATACCT...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGATGTTTGATCTGAATTaGCTTTTGTCCTTCTACACT +
Preference number: 4 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLMFDLN*LLSFYT
Trigger: AGTGTAGAAGGACAAAAGGCAATTCAGATCAAACAT...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GCAATGAGTCATTACACTTACGTATGGGAGTCATACCTAGTTTTTCCTCTATTAACAGATGTTGGTACTTaGACATCAGGAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: AMSHYTYVWESYLVFPLLTDVGT*TSGSRP
Trigger: GGGTCTGCTTCCTGATGTGCAAGTACCAACATCTGT...TAATAGAGGAAAAACTAGGTATGACTCCCATACGTAAGTGTAATGACTCATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGGGTCCAGAAATTAGTTaGACTCGAATAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKGPEIS*TRIKSE
Trigger: TTCTGACTTTATTCGAGTGCAACTAATTTCTGGACC...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTGGTCCAGAAATTAGTTaGACTCGAATAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCGPEIS*TRIKSE
Trigger: TTCTGACTTTATTCGAGTGCAACTAATTTCTGGACC...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp ATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAAAAATGTTTCTGCATTTaGTGGGGGTCGGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: ICKVVTTKGHNVWNNSSKKCFCI*WGSVPT
Trigger: AGTGGGAACCGACCCCCAGCAAATGCAGAAACATTT...TTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GGATATATGGTTCTAAGGTTCTTGATAAAAGTGGTAGCCGGGGCTCAAATACAAACAACTAAATGTTTCTaGATTTGCTGGGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: GYMVLRFLIKVVAGAQIQTTKCF*ICWGSV
Trigger: AACCGACCCCCAGCAAATGCAGAAACATTTAGTTGT...TTGTATTTGAGCCCCGGCTACCACTTTTATCAAGAACCTTAGAACCATATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTTTTCTTTTGTAAGTaGTGCCATTTGTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLLFFCK*CHLLLL
Trigger: AAGCAGCAACAAATGGCAGCACTTACAAAAGAAAAG...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp TTACACATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCTCCTCATATCCGGAGTaGGAAGGTACTCTAATTGAC +
Preference number: 4 (lower is better)
Translates to: LHICKVVTTKGHNVWNNSSSYPE*EGTLID
Trigger: GTCAATTAGAGTACCTTCGCACTCCGGATATGAGGA...GGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAATGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGATTCCTCTTACACATTTaGAAGGTAGTGACAACCAAA +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRFLLHI*KVVTTK
Trigger: TTTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAA...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp ACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTTTAATAAATGCCATGTaGCAGTTTTACAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: TCIVPRNTQSGKSPSWSSLINAM*QFYSHC
Trigger: GCAGTGACTGTAAAACTGGCACATGGCATTTATTAA...AGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp TGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAATTAATAAATGCCATGTaGCAGTTTTACAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: CIVPRNTQSGKSPSWSSELINAM*QFYSHC
Trigger: GCAGTGACTGTAAAACTGGCACATGGCATTTATTAA...TTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp TATAACTGGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACTGGGTCCACAGGTTTTaGTTTAAACATGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: YNWDRANQRHGSTGFALNWVHRF*FKHVDV
Trigger: AACATCCACATGTTTAAAGCAAAACCTGTGGACCCA...GTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR CCA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCATCCAGCTTTGCAATTaGCACAGTTCTTACTTCATC +
Preference number: 4 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVIQLCN*HSSYFI
Trigger: GATGAAGTAAGAACTGTGCCAATTGCAAAGCTGGAT...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CCA 90 bp CCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCATCCTGTTAAAATACTaGTTCCAGAACTACTGCAAT +
Preference number: 4 (lower is better)
Translates to: PEILSLVSHPLGLLKQRCILLKY*FQNYCN
Trigger: ATTGCAGTAGTTCTGGAACCAGTATTTTAACAGGAT...GCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATCTTTTACAGATGTTaGTACTTGCACATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCIFYRC*YLHIRK
Trigger: CTTCCTGATGTGCAAGTACCAACATCTGTAAAAGAT...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGTCAATTTCCAGGAGGACCTaGAATAAATTTGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: SQPLVNDAMSHYTYVWESISRRT*NKFDAS
Trigger: AGAGGCATCAAATTTATTCCAGGTCCTCCTGGAAAT...TGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACATTTCCCAATAAAAAGTaGGGTATCAGTATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETFPNKK*GISIFL
Trigger: GAGGAAGATACTGATACCCCACTTTTTATTGGGAAA...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCTCATTAAGAAGCTGTTaGCTGGCTTCAAATAAACTT +
Preference number: 4 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPSLRSC*LASNKL
Trigger: AAGTTTATTTGAAGCCAGCCAACAGCTTCTTAATGA...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGGCCTTTAGTATAGTTTaGAAGAGTACACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKAFSIV*KSTRSS
Trigger: AGAAGATCGTGTACTCTTCCAAACTATACTAAAGGC...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAGCCTTTAGTATAGTTTaGAAGAGTACACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRAFSIV*KSTRSS
Trigger: AGAAGATCGTGTACTCTTCCAAACTATACTAAAGGC...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCATTACACTTACGTATaGGAGTCATACCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGHYTYV*ESYLVF
Trigger: AAAAACTAGGTATGACTCCCATACGTAAGTGTAATG...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCGAGTGGGACTTGATGGTAACTATAACTGGGATAGGGCAAATCAACGTCATGCATTACACTTACGTATaGGAGTCATACCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SEWDLMVTITGIGQINVMHYTYV*ESYLVF
Trigger: AAAAACTAGGTATGACTCCCATACGTAAGTGTAATG...CATGACGTTGATTTGCCCTATCCCAGTTATAGTTACCATCAAGTCCCACTCGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR CCA 90 bp TATAACTGGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACGATGGTAACTATAACTaGGATAGGGCAAATCAACGT +
Preference number: 4 (lower is better)
Translates to: YNWDRANQRHGSTGFALNDGNYN*DRANQR
Trigger: ACGTTGATTTGCCCTATCCCAGTTATAGTTACCATC...GTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR TCA 90 bp ATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTCATCATTTGTAATGTaGACAGAATCAGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: IEWLFPVPSESKWKFMPRSSFVM*TESEGF
Trigger: AAAGCCCTCTGATTCTGTTCACATTACAAATGATGA...CCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGAATTACTTTATCCCTaGAATAGAAGCAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEEELLYP*NRSSHL
Trigger: AAGATGGCTGCTTCTATTTCAGGGATAAAGTAATTC...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp ATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTTTCCATTTCGGAAATaGGGTAGAGATCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: IEWLFPVPSESKWKFMPRFPFRK*GRDLFQ
Trigger: TTGGAAAAGATCTCTACCTCATTTCCGAAATGGAAA...CCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCGAAGGTACTCTAATTaGCTGTTAAGATCCTTATTC +
Preference number: 4 (lower is better)
Translates to: EIHAQVLVLSPEILSLVSRRYSN*LLRSLF
Trigger: GAATAAGGATCTTAACAGTCAATTAGAGTACCTTCG...ACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR TCA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAACGAAGGTACTCTAATTaGCTGTTAAGATCCTTATTC +
Preference number: 4 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEERRYSN*LLRSLF
Trigger: GAATAAGGATCTTAACAGTCAATTAGAGTACCTTCG...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp TCTTCTTGTTCTGATAGCTTTCTTTTCAGAAGTGCTTCAATGTGTGGCACCTGTGTTTCCAGTCCCATCTaGATCGAAATGGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: SSCSDSFLFRSASMCGTCVSSPI*IEMEIH
Trigger: ATGAATTTCCATTTCGATTCAGATGGGACTGGAAAC...ACAGGTGCCACACATTGAAGCACTTCTGAAAAGAAAGCTATCAGAACAAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp TATAACTGGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACTCCCTCTCCTTGATATaGTACAGTATTACTATGAAG +
Preference number: 4 (lower is better)
Translates to: YNWDRANQRHGSTGFALNSLSLI*YSITMK
Trigger: CTTCATAGTAATACTGTATCATATCAAGGAGAGGGA...GTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR GCA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTTTACATACAACGTCTaGATGTCGTCTTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWFTYNV*MSSCIS
Trigger: GGAAATACAAGACGACATGCAGACGTTGTATGTAAA...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp TCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGATGTTTGATCTGAATTaGCTTTTGTCCTTCTACACT +
Preference number: 4 (lower is better)
Translates to: SSQPLVNDAMSHYTYVWEMFDLN*LLSFYT
Trigger: AGTGTAGAAGGACAAAAGGCAATTCAGATCAAACAT...CTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp CCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATGGTCCAGAAATTAGTTaGACTCGAATAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PYSHCLVCTQQNDTAEEDGPEIS*TRIKSE
Trigger: TTCTGACTTTATTCGAGTGCAACTAATTTCTGGACC...ATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGCTTTTCTTTTGTAAGTaGTGCCATTTGTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWLFFCK*CHLLLL
Trigger: AAGCAGCAACAAATGGCAGCACTTACAAAAGAAAAG...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp GTACTTTTCTTCAGGATTAATAAATGCCATGTGCCAGTTTTACAGTCACTGCCAACAGTCCATGTCACTTaGCAGATGCCAAGAAATAAC +
Preference number: 4 (lower is better)
Translates to: VLFFRINKCHVPVLQSLPTVHVT*QMPRNN
Trigger: GTTATTTCTTGGCATCTGGCAAGTGACATGGACTGT...TGGCAGTGACTGTAAAACTGGCACATGGCATTTATTAATCCTGAAGAAAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCACAGTCCATGTCACTTaGCAGATGCCAAGAAATAAC +
Preference number: 4 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSTVHVT*QMPRNN
Trigger: GTTATTTCTTGGCATCTGGCAAGTGACATGGACTGT...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCTCACACTGTCTAGTTTaGACACAGCAGAACGATACT +
Preference number: 4 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSSHCLV*TQQNDT
Trigger: AGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTTCCTCATATCCGGAGTaGGAAGGTACTCTAATTGAC +
Preference number: 4 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSSSYPE*EGTLID
Trigger: GTCAATTAGAGTACCTTCGCACTCCGGATATGAGGA...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp CCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTAATAAATGCCATGTaGCAGTTTTACAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: PYSHCLVCTQQNDTAEEDLINAM*QFYSHC
Trigger: GCAGTGACTGTAAAACTGGCACATGGCATTTATTAA...ATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp AACTGGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGGTCCTGGCTCCTTTCTaGTACATAGTAATTATAATT +
Preference number: 4 (lower is better)
Translates to: NWDRANQRHGSTGFALNMVLAPF*YIVIII
Trigger: AATTATAATTACTATGTAGCAGAAAGGAGCCAGGAC...CATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR CCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAGATTTTGTCCTTCACTaGCATAATATTCATACATGC +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRDFVLH*HNIHTC
Trigger: GCATGTATGAATATTATGCCAGTGAAGGACAAAATC...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CCA 90 bp GTACTTTTCTTCAGGATTAATAAATGCCATGTGCCAGTTTTACAGTCACTGCCATGTAGTCTTGCAACATaGCTACTGGGAAGCAACTTA +
Preference number: 4 (lower is better)
Translates to: VLFFRINKCHVPVLQSLPCSLAT*LLGSNL
Trigger: TAAGTTGCTTCCCAGTAGCCATGTTGCAAGACTACA...TGGCAGTGACTGTAAAACTGGCACATGGCATTTATTAATCCTGAAGAAAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp CCAATAAAAAGTGGGGTATCAGTATCTTCCTCATTAGAGCCTTTAATGGTGGCTATTTCCAGGAGGACCTaGAATAAATTTGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: PIKSGVSVSSSLEPLMVAISRRT*NKFDAS
Trigger: AGAGGCATCAAATTTATTCCAGGTCCTCCTGGAAAT...AGCCACCATTAAAGGCTCTAATGAGGAAGATACTGATACCCCACTTTTTATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTATCATAAAACCAAACTaGATACAATATGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLIIKPN*IQYVPT
Trigger: AGTGGGGACATATTGTATCCAGTTTGGTTTTATGAT...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp CCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTTCCCAATAAAAAGTaGGGTATCAGTATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PYSHCLVCTQQNDTAEEDFPNKK*GISIFL
Trigger: GAGGAAGATACTGATACCCCACTTTTTATTGGGAAA...ATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp CTGTCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGTCATTAAGAAGCTGTTaGCTGGCTTCAAATAAACTT +
Preference number: 4 (lower is better)
Translates to: LSSQPLVNDAMSHYTYVWSLRSC*LASNKL
Trigger: AAGTTTATTTGAAGCCAGCCAACAGCTTCTTAATGA...CCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGAGTTCATTTCGCAATTaGGCCTCTTTTAATCTTGCT +
Preference number: 4 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWSSFRN*ASFNLA
Trigger: AGCAAGATTAAAAGAGGCCCAATTGCGAAATGAACT...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp ATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGAGTTCATTTCGCAATTaGGCCTCTTTTAATCTTGCT +
Preference number: 4 (lower is better)
Translates to: IEWLFPVPSESKWKFMPRSSFRN*ASFNLA
Trigger: AGCAAGATTAAAAGAGGCCCAATTGCGAAATGAACT...CCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp ATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAAAAGTGCTTCAATGTGTaGCACCTGTTGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ICKVVTTKGHNVWNNSSKKCFNV*HLLCCR
Trigger: CCTACAACACAACAGGTGCCACACATTGAAGCACTT...TTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCCTTTTCTATAATGATTaGCCGCATCCAGATTATCCA +
Preference number: 4 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVLFYND*PHPDYP
Trigger: TGGATAATCTGGATGCGGCCAATCATTATAGAAAAG...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCTCTCTGTCACCTCTCATACATCTGTTTTGGTTATAATCCTGTAATCCCAGTAGATCAGACACTGTTTTaGAACTGGAGCTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: SLCHLSYICFGYNPVIPVDQTLF*NWSSKY
Trigger: GTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATC...TACTGGGATTACAGGATTATAACCAAAACAGATGTATGAGAGGTGACAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR CCA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACACATTACACTTACGTATaGGAGTCATACCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETHYTYV*ESYLVF
Trigger: AAAAACTAGGTATGACTCCCATACGTAAGTGTAATG...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCAAATACCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTGAAGGCCCATTACACTTACGTATaGGAGTCATACCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SKYHSPKFIHWRSFILKAHYTYV*ESYLVF
Trigger: AAAAACTAGGTATGACTCCCATACGTAAGTGTAATG...GGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGACATTACACTTACGTATaGGAGTCATACCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRHYTYV*ESYLVF
Trigger: AAAAACTAGGTATGACTCCCATACGTAAGTGTAATG...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCTCTCTGTCACCTCTCATACATCTGTTTTGGTTATAATCCTGTAATCCCAGTATCTTTTAGGAGGAACTaGACAATCTGTCGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SLCHLSYICFGYNPVIPVSFRRN*TICRLN
Trigger: GTTGAGACGACAGATTGTCCAGTTCCTCCTAAAAGA...TACTGGGATTACAGGATTATAACCAAAACAGATGTATGAGAGGTGACAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR CCA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTAAAGGGCATAATGTCTaGAATAATTCCAGTAAATCC +
Preference number: 4 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLKGHNV*NNSSKS
Trigger: GGATTTACTGGAATTATTCCAGACATTATGCCCTTT...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAAAGGGCATAATGTCTaGAATAATTCCAGTAAATCC +
Preference number: 4 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRKGHNV*NNSSKS
Trigger: GGATTTACTGGAATTATTCCAGACATTATGCCCTTT...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGAAAGGGCATAATGTCTaGAATAATTCCAGTAAATCC +
Preference number: 4 (lower is better)
Translates to: WLFPVPSESKWKFMPRYLKGHNV*NNSSKS
Trigger: GGATTTACTGGAATTATTCCAGACATTATGCCCTTT...CAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCAACACATACATTTCCTaGGACACAAACTTACTTACC +
Preference number: 4 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVNTYIS*DTNLLT
Trigger: GGTAAGTAAGTTTGTGTCCCAGGAAATGTATGTGTT...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGCCTCATCCTGATGTTTaGTCTGAATTGCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMPHPDV*SELPFV
Trigger: GACAAAAGGCAATTCAGATCAAACATCAGGATGAGG...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp GGATATATGGTTCTAAGGTTCTTGATAAAAGTGGTAGCCGGGGCTCAAATACAAGAATTACTTTATCCCTaGAATAGAAGCAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: GYMVLRFLIKVVAGAQIQELLYP*NRSSHL
Trigger: AAGATGGCTGCTTCTATTTCAGGGATAAAGTAATTC...TTGTATTTGAGCCCCGGCTACCACTTTTATCAAGAACCTTAGAACCATATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR TCA 90 bp GACGCAATGAGTCATTACACTTACGTATGGGAGTCATACCTAGTTTTTCCTCTATTTCCATTTCGGAAATaGGGTAGAGATCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: DAMSHYTYVWESYLVFPLFPFRK*GRDLFQ
Trigger: TTGGAAAAGATCTCTACCTCATTTCCGAAATGGAAA...TAGAGGAAAAACTAGGTATGACTCCCATACGTAAGTGTAATGACTCATTGCGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR GCA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTTTTCTTCAGGTGAAATaGCAAGTGTCTGACACACAC +
Preference number: 4 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSFLQVK*QVSDTH
Trigger: GTGTGTGTCAGACACTTGGCATTTCACCTGAAGAAA...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR GCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGCTTGACCAGCTGTCCTaGTTTGTATATCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMLDQLS*FVYLSI
Trigger: GATGGAAAGATATACAAAGCAGGACAGCTGGTCAAG...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp TTCCTCATTAGAGCCTTTAATGGTGGCTATTATAGTGCCAACCAAATCAATTCCTCTATCAGGGAGCCTTaGCATTTCATCTTCTACATA +
Preference number: 4 (lower is better)
Translates to: FLIRAFNGGYYSANQINSSIREP*HFIFYI
Trigger: TATGTAGAAGATGAAATGGCAAGGCTCCCTGATAGA...GGAATTGATTTGGTTGGCACTATAATAGCCACCATTAAAGGCTCTAATGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR GCA 90 bp TCAGGAAGCAGACCCTGTAGCAAGTGTTCTTTGTTAATCTCAGGAGTCCAATTAAGGTATTTCAATTCTTaGTTTAAGCGTCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SGSRPCSKCSLLISGVQLRYFNS*FKRLVF
Trigger: AAAGACCAGACGCTTAAAGCAAGAATTGAAATACCT...TAATTGGACTCCTGAGATTAACAAAGAACACTTGCTACAGGGTCTGCTTCCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR GCA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTTCAGGATTAATAAATaGCATGTGCCAGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWFRINK*HVPVLQ
Trigger: CTGTAAAACTGGCACATGGCATTTATTAATCCTGAA...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR GCA 90 bp GCTACCCTCATATGTGTGATGACTGTTAGTTGTACAATTACATTTAAGAAAGAGTTTTGTCTCTCACGTTaGTGGCTACCCTCATATGTG +
Preference number: 4 (lower is better)
Translates to: ATLICVMTVSCTITFKKEFCLSR*WLPSYV
Trigger: CACATATGAGGGTAGCCAGCAACGTGAGAGACAAAA...CTCTTTCTTAAATGTAATTGTACAACTAACAGTCATCACACATATGAGGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR CCA 90 bp TCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTATTCCAGTTACTAGTTGACTaGTATGACCAAATTCATCCT +
Preference number: 4 (lower is better)
Translates to: SHCLVCTQQNDTAEEDLFQLLVD*YDQIHP
Trigger: AGGATGAATTTGGTCATACCAGTCAACTAGTAACTG...GAATAAATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CCA 90 bp TCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGTCAATCATAAAACCAAACTaGATACAATATGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: SQPLVNDAMSHYTYVWESIIKPN*IQYVPT
Trigger: AGTGGGGACATATTGTATCCAGTTTGGTTTTATGAT...TGACTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp AATCTGTCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTAGCCTTTAGTATAGTTTaGAAGAGTACACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: NLSSQPLVNDAMSHYTYVAFSIV*KSTRSS
Trigger: AGAAGATCGTGTACTCTTCCAAACTATACTAAAGGC...TACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CCA 90 bp CTTGGAATGAAACCTGGCAATAGCGCATATCTTTTACAGATGTTGGTACTTGCAGCCTTTAGTATAGTTTaGAAGAGTACACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LGMKPGNSAYLLQMLVLAAFSIV*KSTRSS
Trigger: AGAAGATCGTGTACTCTTCCAAACTATACTAAAGGC...TGCAAGTACCAACATCTGTAAAAGATATGCGCTATTGCCAGGTTTCATTCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CCA 90 bp GTACTTTTCTTCAGGATTAATAAATGCCATGTGCCAGTTTTACAGTCACTGCCACCGAAGTTTATCCATTaGAGGAGCTTTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VLFFRINKCHVPVLQSLPPKFIH*RSFILK
Trigger: CTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGG...TGGCAGTGACTGTAAAACTGGCACATGGCATTTATTAATCCTGAAGAAAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TTACACATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCCCGAAGTTTATCCATTaGAGGAGCTTTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHICKVVTTKGHNVWNNSPKFIH*RSFILK
Trigger: CTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGG...GGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAATGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGGATCAGACACTGTTTTaGAACTGGAGCTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMDQTLF*NWSSKY
Trigger: GTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATC...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp ATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCTTTTAGGAGGAACTaGACAATCTGTCGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: ICKVVTTKGHNVWNNSSKSFRRN*TICRLN
Trigger: GTTGAGACGACAGATTGTCCAGTTCCTCCTAAAAGA...TTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR TCA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTCGAACATATCCTGAATaGTCACTTTCAAAGTCACCT +
Preference number: 4 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSRTYPE*SLSKSP
Trigger: AGGTGACTTTGAAAGTGATCATTCAGGATATGTTCG...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTGGACGAACATATCCTaGATGATCACTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMWTNIS*MITFKV
Trigger: GACTTTGAAAGTGATCATTCAGGATATGTTCGTCCA...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR TCA 90 bp ACCTGGAATAAATTTGATGCCTCTTACACTTATACTCTGTGTGTTTTCCTGAAAGGTTGTTTTCAAATTTaGGCTATCAAGTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: TWNKFDASYTYTLCVFLKGCFQI*AIKSNP
Trigger: GGGGTTGGACTTGATAGCTCAAATTTGAAAACAACC...TTTCAGGAAAACACACAGAGTATAAGTGTAAGAGGCATCAAATTTATTCCAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR TCA 90 bp ATAAAATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCGCAGAACGATACTGCTaGAGAAGATCTATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: IKLNGCFQSHLNRNGNSCAERYC*RRSICS
Trigger: GGAACAAATAGATCTTCTTCAGCAGTATCGTTCTGC...GCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp ATAAAATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCTATTGCTGCATATGTTaGCCAGGGACCTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: IKLNGCFQSHLNRNGNSCYCCIC*PGTLLF
Trigger: AAAAAGCAAGGTCCCTGGGCAACATATGCAGCAATA...GCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR GCA 90 bp TCTTCTTGTTCTGATAGCTTTCTTTTCAGAAGTGCTTCAATGTGTGGCACCTGTATGTTTGATCTGAATTaGCTTTTGTCCTTCTACACT +
Preference number: 4 (lower is better)
Translates to: SSCSDSFLFRSASMCGTCMFDLN*LLSFYT
Trigger: AGTGTAGAAGGACAAAAGGCAATTCAGATCAAACAT...ACAGGTGCCACACATTGAAGCACTTCTGAAAAGAAAGCTATCAGAACAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR GCA 90 bp TCTTCTTGTTCTGATAGCTTTCTTTTCAGAAGTGCTTCAATGTGTGGCACCTGTTTCAGGATTAATAAATaGCATGTGCCAGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: SSCSDSFLFRSASMCGTCFRINK*HVPVLQ
Trigger: CTGTAAAACTGGCACATGGCATTTATTAATCCTGAA...ACAGGTGCCACACATTGAAGCACTTCTGAAAAGAAAGCTATCAGAACAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CCA 90 bp TCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTATTCTCATTAAGAAGCTGTTaGCTGGCTTCAAATAAACTT +
Preference number: 4 (lower is better)
Translates to: SHCLVCTQQNDTAEEDLFSLRSC*LASNKL
Trigger: AAGTTTATTTGAAGCCAGCCAACAGCTTCTTAATGA...GAATAAATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CCA 90 bp TCTCTCTGTCACCTCTCATACATCTGTTTTGGTTATAATCCTGTAATCCCAGTAGCCTTTAGTATAGTTTaGAAGAGTACACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SLCHLSYICFGYNPVIPVAFSIV*KSTRSS
Trigger: AGAAGATCGTGTACTCTTCCAAACTATACTAAAGGC...TACTGGGATTACAGGATTATAACCAAAACAGATGTATGAGAGGTGACAGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR CCA 90 bp ATAAAATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCGTCTCGAGCAAAGACTaGATCTCCAATGGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: IKLNGCFQSHLNRNGNSCVSSKD*ISNGFK
Trigger: TTTAAACCCATTGGAGATCCAGTCTTTGCTCGAGAC...GCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TTGATTTTGGAACTTAATCTTGAATTTTGTCTCTCACGTTGCTGGCTACCCTCAGTCAGTCACTGTTGCTaGGCATTCAATGAATTTTAT +
Preference number: 4 (lower is better)
Translates to: LILELNLEFCLSRCWLPSVSHCC*AFNEFY
Trigger: ATAAAATTCATTGAATGCCCAGCAACAGTGACTGAC...TGAGGGTAGCCAGCAACGTGAGAGACAAAATTCAAGATTAAGTTCCAAAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR TCA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTTTTCCATTTCGGAAATaGGGTAGAGATCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSFPFRK*GRDLFQ
Trigger: TTGGAAAAGATCTCTACCTCATTTCCGAAATGGAAA...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR GCA 90 bp TATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTAAGGTATTTCAATTCTTaGTTTAAGCGTCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: YSHCLVCTQQNDTAEEDLRYFNS*FKRLVF
Trigger: AAAGACCAGACGCTTAAAGCAAGAATTGAAATACCT...TAAATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CCA 90 bp GTACTTTTCTTCAGGATTAATAAATGCCATGTGCCAGTTTTACAGTCACTGCCATCATTAAGAAGCTGTTaGCTGGCTTCAAATAAACTT +
Preference number: 4 (lower is better)
Translates to: VLFFRINKCHVPVLQSLPSLRSC*LASNKL
Trigger: AAGTTTATTTGAAGCCAGCCAACAGCTTCTTAATGA...TGGCAGTGACTGTAAAACTGGCACATGGCATTTATTAATCCTGAAGAAAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp ATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAAAGTTCATTTCGCAATTaGGCCTCTTTTAATCTTGCT +
Preference number: 4 (lower is better)
Translates to: ICKVVTTKGHNVWNNSSKSSFRN*ASFNLA
Trigger: AGCAAGATTAAAAGAGGCCCAATTGCGAAATGAACT...TTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CCA 90 bp TCACATTTTAAATGTTTAGGTTCATCAGGAAGTGGTCTTACTGTAAACGCACTTAGTTCATTTCGCAATTaGGCCTCTTTTAATCTTGCT +
Preference number: 4 (lower is better)
Translates to: SHFKCLGSSGSGLTVNALSSFRN*ASFNLA
Trigger: AGCAAGATTAAAAGAGGCCCAATTGCGAAATGAACT...AAGTGCGTTTACAGTAAGACCACTTCCTGATGAACCTAAACATTTAAAATGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CCA 90 bp ATAAAATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCTTTTCTATAATGATTaGCCGCATCCAGATTATCCA +
Preference number: 4 (lower is better)
Translates to: IKLNGCFQSHLNRNGNSCLFYND*PHPDYP
Trigger: TGGATAATCTGGATGCGGCCAATCATTATAGAAAAG...GCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CCA 90 bp TATAATCTAATGTCTAAGGACTCCAAATATTGGTACGGGGTGAGTATCCCTAATAAAGGGCATAATGTCTaGAATAATTCCAGTAAATCC +
Preference number: 4 (lower is better)
Translates to: YNLMSKDSKYWYGVSIPNKGHNV*NNSSKS
Trigger: GGATTTACTGGAATTATTCCAGACATTATGCCCTTT...ATTAGGGATACTCACCCCGTACCAATATTTGGAGTCCTTAGACATTAGATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
3UTR CAA 72 bp TCCATAATGTCCAGTAAGATTCATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAATCGAAATGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SIMSSKIHKIEW*FPVPSESKWKF
Trigger: GAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTATGAATCTTACTGGACATTATGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS TCA 90 bp AAAAGGAGAAAAGACAGCGACGCCTGCCGCCGCCGGGCTCAGGGCTaGGGTGCGCGCTCCGCGCGGCGCCTTCAGCTCCAGCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: KRRKDSDACRRRAQG*GARSARRLQLQLPG
Trigger: CCCCGGGAGCTGGAGCTGAAGGCGCCGCGCGGAGCGCGCACCTCAGCCCTGAGCCCGGCGGCGGCAGGCGTCGCTGTCTTTTCTCCTTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS GCA 90 bp GCGGCAGGCGCGAGGATCACCCGGGAACCGATTCAAACGCGCTCCTaGCCGTGCACCACGTCACTTCCGCGGCCCGCCACTCCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: AAGARITREPIQTRS*PCTTSLPRPATPEE
Trigger: CTCCTCAGGAGTGGCGGGCCGCGGAAGTGACGTGGTGCACGGGCAGGAGCGCGTTTGAATCGGTTCCCGGGTGATCCTCGCGCCTGCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS GCA 90 bp GGCGCGAGGATCACCCGGGAACCGATTCAAACGCGCTCCTGCCCGTaGACCACGTCACTTCCGCGGCCCGCCACTCCTGAGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GARITREPIQTRSCP*TTSLPRPATPEEKG
Trigger: CCCCTTCTCCTCAGGAGTGGCGGGCCGCGGAAGTGACGTGGTGCACGGGCAGGAGCGCGTTTGAATCGGTTCCCGGGTGATCCTCGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCCTATACACGGCCCAGTaGTTAAGCTGTTTAGAGGTC +
Preference number: 5 (lower is better)
Translates to: AESRAFLLRPMASSLCHLLYTAQ*LSCLEV
Trigger: GACCTCTAAACAGCTTAACAACTGGGCCGTGTATAG...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTTGACCCTCCATGGCTaGTTCCTGGAAGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSLTLHG*FLEAFA
Trigger: TGCAAAAGCTTCCAGGAACAAGCCATGGAGGGTCAA...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTTACAGATGTTGGTACTaGCACATCAGGAAGCAGACC +
Preference number: 5 (lower is better)
Translates to: CRKQGILTETNGLFSLSPYRCWY*HIRKQT
Trigger: GGTCTGCTTCCTGATGTGCAAGTACCAACATCTGTA...AGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCCACCTGCTGACGACCTaGGGTTTCATCATAGATACG +
Preference number: 5 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPHLLTT*GFIIDT
Trigger: CGTATCTATGATGAAACCCAAGGTCGTCAGCAGGTG...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp AACTGGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTGTAATCTCAGTACTTaGGGAGGCCGCGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: NWDRANQRHGSTGFALNMCNLST*GGRGRR
Trigger: TCTCCTGCCGCGGCCTCCCAAAGTACTGAGATTACA...CATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR CAA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTGTGCCTGAGGTTCCATaGCAATTTGAACCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSVPEVP*QFEPLL
Trigger: GAGGAGAGGTTCAAATTGCAATGGAACCTCAGGCAC...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp CAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGCTGTCCTATCCAGCTTaGCAATTGGCACAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: QSGKSPSWSSETEMQKAGLSYPA*QLAQFL
Trigger: TAAGAACTGTGCCAATTGCAAAGCTGGATAGGACAG...CCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCAACCAGGAGTTTCTTaGACCCTCCATGGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGQPGVS*TLHGLF
Trigger: GAACAAGCCATGGAGGGTCAAAGAAACTCCTGGTTG...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTGAGTTTACAGGGCCCTaGGCTGTAACACCTCGAATT +
Preference number: 5 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSEFTGP*AVTPRI
Trigger: AATTCGAGGTGTTACAGCCAAGGGCCCTGTAAACTC...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTACAGATGTTGGTACTaGCACATCAGGAAGCAGACC +
Preference number: 5 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSYRCWY*HIRKQT
Trigger: GGTCTGCTTCCTGATGTGCAAGTACCAACATCTGTA...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTGAAGGCCCCCAAACTTACAGATGTTGGTACTaGCACATCAGGAAGCAGACC +
Preference number: 5 (lower is better)
Translates to: PFPEVYPLEELYSEGPQTYRCWY*HIRKQT
Trigger: GGTCTGCTTCCTGATGTGCAAGTACCAACATCTGTA...AGTTTGGGGGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCCCCGAAGTTTATCCATaGGAGGAGCTTTATTCTGAA +
Preference number: 5 (lower is better)
Translates to: AESRAFLLRPMASSLCHLPEVYP*EELYSE
Trigger: TTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGG...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGCTTGAGGTCAGGAGTTaGAGATTAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQLEVRS*RLAWPT
Trigger: TGTTGGCCAGGCTAATCTCAAACTCCTGACCTCAAG...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR CAA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCTGTAATCCCAGTACTTaGAGAGGCCAAGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPCNPST*RGQDRQ
Trigger: CTGCCTGTCTTGGCCTCTCAAAGTACTGGGATTACA...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR CAA 90 bp GCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTACCAGCTGTCCTGCTTaGTATATCTTTCCATCCCAT +
Preference number: 5 (lower is better)
Translates to: AQVLVLSPEILSLVSHPLTSCPA*YIFPSH
Trigger: ATGGGATGGAAAGATATACAAAGCAGGACAGCTGGT...AAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAGAGGGGAAGTGTCTaGATTGTCTTGACCAGCTGT +
Preference number: 5 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQKRGSV*IVLTSC
Trigger: ACAGCTGGTCAAGACAATCAAGACACTTCCCCTCTT...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGAAGAGGGGAAGTGTCTaGATTGTCTTGACCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMKRGSV*IVLTSC
Trigger: ACAGCTGGTCAAGACAATCAAGACACTTCCCCTCTT...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp CCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGGTTCCATTGCAATTaGAACCTCTCCTCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: PEILSLVSHPLGLLKQRCRFHCN*NLSSCS
Trigger: GCTACAGGAGGAGAGGTTCAAATTGCAATGGAACCT...GCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTTGACCCTCCATGGCTaGTTCCTGGAAGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKLTLHG*FLEAFA
Trigger: TGCAAAAGCTTCCAGGAACAAGCCATGGAGGGTCAA...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CTGTCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGCAACCAGGAGTTTCTTaGACCCTCCATGGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LSSQPLVNDAMSHYTYVWQPGVS*TLHGLF
Trigger: GAACAAGCCATGGAGGGTCAAAGAAACTCCTGGTTG...CCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACGAGTTTACAGGGCCCTaGGCTGTAACACCTCGAATT +
Preference number: 5 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHEFTGP*AVTPRI
Trigger: AATTCGAGGTGTTACAGCCAAGGGCCCTGTAAACTC...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGGAGTTTACAGGGCCCTaGGCTGTAACACCTCGAATT +
Preference number: 5 (lower is better)
Translates to: SSQPLVNDAMSHYTYVWEEFTGP*AVTPRI
Trigger: AATTCGAGGTGTTACAGCCAAGGGCCCTGTAAACTC...CTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp AGATGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACATAGACTGGAAGGTTaGGAGCACCTGAAAACTTAC +
Preference number: 5 (lower is better)
Translates to: RCRKQGILTETNGLFSLSHRLEG*EHLKTY
Trigger: GTAAGTTTTCAGGTGCTCCAAACCTTCCAGTCTATG...TGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTCTGTAGCAAGTGTTCTTaGTTAATCTCAGGAGTCCAA +
Preference number: 5 (lower is better)
Translates to: AESRAFLLRPMASSLCHLCSKCS*LISGVQ
Trigger: TTGGACTCCTGAGATTAACAAAGAACACTTGCTACA...GAGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGACACCTGCTGACGACCTaGGGTTTCATCATAGATACG +
Preference number: 5 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRHLLTT*GFIIDT
Trigger: CGTATCTATGATGAAACCCAAGGTCGTCAGCAGGTG...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTCACCTGCTGACGACCTaGGGTTTCATCATAGATACG +
Preference number: 5 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCHLLTT*GFIIDT
Trigger: CGTATCTATGATGAAACCCAAGGTCGTCAGCAGGTG...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 5 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS GCA 90 bp GACCAGCTGTCCTGCTTTGTATATCTTTCCATCCCATTCTATTGCTaGATATGTTGCCCAGGGACCTTGCTTTTTAGAAGGAAGATCAGG +
Preference number: 5 (lower is better)
Translates to: DQLSCFVYLSIPFYC*ICCPGTLLFRRKIR
Trigger: CCTGATCTTCCTTCTAAAAAGCAAGGTCCCTGGGCAACATATGCAGCAATAGAATGGGATGGAAAGATATACAAAGCAGGACAGCTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577300.1
ENST00000577880.5
CDS-3UTR CAA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTGGGAATCTGCAGGTTaGCTTATCATTCTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSWESAG*LIILAD
Trigger: ATCAGCCAGAATGATAAGCAAACCTGCAGATTCCCA...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGAAGCTCGTGAACATCTaGGGAATCTGCAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKKLVNI*GICRFA
Trigger: AGCAAACCTGCAGATTCCCAAGATGTTCACGAGCTT...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTCTGTATGTGTTCTGGTaGTACCCCTGTGATAACCAC +
Preference number: 5 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCLYVFW*YPCDNH
Trigger: GTGGTTATCACAGGGGTACAACCAGAACACATACAG...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp TCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGATGTTGCCCAGGGACCTaGCTTTTTAGAAGGAAGATC +
Preference number: 5 (lower is better)
Translates to: SHLNRNGNSCPGTCIVPRCCPGT*LFRRKI
Trigger: GATCTTCCTTCTAAAAAGCAAGGTCCCTGGGCAACA...TCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGCTATTGCTGCATATGTaGCCCAGGGACCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKLLLHM*PRDLAF
Trigger: AAAAGCAAGGTCCCTGGGCAACATATGCAGCAATAG...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGACCAGCTGTCCTGCTTaGTATATCTTTCCATCCCAT +
Preference number: 5 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQTSCPA*YIFPSH
Trigger: ATGGGATGGAAAGATATACAAAGCAGGACAGCTGGT...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTCTGTCCTATCCAGCTTaGCAATTGGCACAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSLSYPA*QLAQFL
Trigger: TAAGAACTGTGCCAATTGCAAAGCTGGATAGGACAG...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTATCTATCAGGGAGCCTaGCCATTTCATCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSIYQGA*PFHLLH
Trigger: ATGTAGAAGATGAAATGGCAAGGCTCCCTGATAGAT...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TCCCTTCCAGGACTACTTTCTGCCAGCACCAGACTCATGATTTCAGCCGAACCAGAATGTAAAATAACTTaGAGCTCAACCAGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SLPGLLSASTRLMISAEPECKIT*SSTRSF
Trigger: GAAACTCCTGGTTGAGCTCAAAGTTATTTTACATTC...TGGTTCGGCTGAAATCATGAGTCTGGTGCTGGCAGAAAGTAGTCCTGGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGATGGTTCTAAGGTTCTaGATAAAAGTGGTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMMVLRF*IKVVAG
Trigger: CCCGGCTACCACTTTTATCAAGAACCTTAGAACCAT...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp TGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTAAGTGCTGCCATTTGTaGCTGCTTCTTAACATCATT +
Preference number: 5 (lower is better)
Translates to: CRKQGILTETNGLFSLSPKCCHL*LLLNII
Trigger: AATGATGTTAAGAAGCAGCAACAAATGGCAGCACTT...AGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTGTAAGTGCTGCCATTaGTTGCTGCTTCTTAACATC +
Preference number: 5 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPCKCCH*LLLLNI
Trigger: GATGTTAAGAAGCAGCAACAAATGGCAGCACTTACA...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCCACCTGCTGACGACCTaGGGTTTCATCATAGATACG +
Preference number: 5 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVHLLTT*GFIIDT
Trigger: CGTATCTATGATGAAACCCAAGGTCGTCAGCAGGTG...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp AGATGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCAAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: RCRKQGILTETNGLFSLSRSDTV*ELELQI
Trigger: TATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCT...TGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp CTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: LSLVSHPLGLLKQRCRKQRSDTV*ELELQI
Trigger: TATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCT...CTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPRSDTV*ELELQI
Trigger: TATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCT...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp CCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGTTCACACTGTCTAGTTaGCACACAGCAGAACGATAC +
Preference number: 5 (lower is better)
Translates to: PRNTQSGKSPSWSSETEMFTLSS*HTAERY
Trigger: GTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAA...CATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp CCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCTTCACACTGTCTAGTTaGCACACAGCAGAACGATAC +
Preference number: 5 (lower is better)
Translates to: PEILSLVSHPLGLLKQRCFTLSS*HTAERY
Trigger: GTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAA...GCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGCTGTCGTCTCAACCTTaGGTGAATGACGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: WLFPVPSESKWKFMPRYLLSSQP*VNDAMS
Trigger: ACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG...CAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCTGTCGTCTCAACCTTaGGTGAATGACGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHLSSQP*VNDAMS
Trigger: ACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 5 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGCAGGTCCCAACCATTTaGAATAAGGGATACTCAACC +
Preference number: 5 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQQVPTI*NKGYST
Trigger: GGTTGAGTATCCCTTATTCAAAATGGTTGGGACCTG...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp GCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTTGTACAGATATGGGCTaGGGGCTAGATAATATCCAT +
Preference number: 5 (lower is better)
Translates to: AQVLVLSPEILSLVSHPLCTDMG*GLDNIH
Trigger: ATGGATATTATCTAGCCCCAAGCCCATATCTGTACA...AAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp AACTGGGATAGGGCAAATCAACGTCATGGGTCCACAGGTTTTGCTTTAAACATGTTCTCCGAGTGGGACTaGATGGTAACTATAACTGGG +
Preference number: 5 (lower is better)
Translates to: NWDRANQRHGSTGFALNMFSEWD*MVTITG
Trigger: CCCAGTTATAGTTACCATCAAGTCCCACTCGGAGAA...CATGTTTAAAGCAAAACCTGTGGACCCATGACGTTGATTTGCCCTATCCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS GCA 90 bp CTTGACCAGCTGTCCTGCTTTGTATATCTTTCCATCCCATTCTATTaGTGCATATGTTGCCCAGGGACCTTGCTTTTTAGAAGGAAGATC +
Preference number: 5 (lower is better)
Translates to: LDQLSCFVYLSIPFY*CICCPGTLLFRRKI
Trigger: GATCTTCCTTCTAAAAAGCAAGGTCCCTGGGCAACATATGCAGCAATAGAATGGGATGGAAAGATATACAAAGCAGGACAGCTGGTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577300.1
ENST00000577880.5
CDS-3UTR CAA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAATGTTGCCCAGGGACCTaGCTTTTTAGAAGGAAGATC +
Preference number: 5 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEECCPGT*LFRRKI
Trigger: GATCTTCCTTCTAAAAAGCAAGGTCCCTGGGCAACA...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CAA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAACTATTGCTGCATATGTaGCCCAGGGACCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEELLLHM*PRDLAF
Trigger: AAAAGCAAGGTCCCTGGGCAACATATGCAGCAATAG...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CAA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGAGGTTCCATTGCAATTaGAACCTCTCCTCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWRFHCN*NLSSCS
Trigger: GCTACAGGAGGAGAGGTTCAAATTGCAATGGAACCT...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp GACGCAATGAGTCATTACACTTACGTATGGGAGTCATACCTAGTTTTTCCTCTAGTGCCTGAGGTTCCATaGCAATTTGAACCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: DAMSHYTYVWESYLVFPLVPEVP*QFEPLL
Trigger: GAGGAGAGGTTCAAATTGCAATGGAACCTCAGGCAC...TAGAGGAAAAACTAGGTATGACTCCCATACGTAAGTGTAATGACTCATTGCGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CAA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGATCTATCAGGGAGCCTaGCCATTTCATCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQIYQGA*PFHLLH
Trigger: ATGTAGAAGATGAAATGGCAAGGCTCCCTGATAGAT...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CTGTCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGCATAGACTGGAAGGTTaGGAGCACCTGAAAACTTAC +
Preference number: 5 (lower is better)
Translates to: LSSQPLVNDAMSHYTYVWHRLEG*EHLKTY
Trigger: GTAAGTTTTCAGGTGCTCCAAACCTTCCAGTCTATG...CCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCACCTTATCTTTTACAGATGTaGGTACTTGCACATCAGGAA +
Preference number: 5 (lower is better)
Translates to: CRKQGILTETNGLFSLSPYLLQM*VLAHQE
Trigger: TTCCTGATGTGCAAGTACCAACATCTGTAAAAGATA...AGGTGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCAGGTTGTTTTCAAATTaGAGCTATCAAGTCCAACCC +
Preference number: 5 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPRLFSN*SYQVQP
Trigger: GGGTTGGACTTGATAGCTCAAATTTGAAAACAACCT...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACATGGTTCTAAGGTTCTaGATAAAAGTGGTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHMVLRF*IKVVAG
Trigger: CCCGGCTACCACTTTTATCAAGAACCTTAGAACCAT...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp CCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTGAAGGCCCCCAAACTAAGTGCTGCCATTTGTaGCTGCTTCTTAACATCATT +
Preference number: 5 (lower is better)
Translates to: PFPEVYPLEELYSEGPQTKCCHL*LLLNII
Trigger: AATGATGTTAAGAAGCAGCAACAAATGGCAGCACTT...AGTTTGGGGGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp GTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGCCCGAAGTTTATCCATaGGAGGAGCTTTATTCTGAA +
Preference number: 5 (lower is better)
Translates to: VPSESKWKFMPRYLYCPQPEVYP*EELYSE
Trigger: TTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGG...CTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp CAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCCCGAAGTTTATCCATaGGAGGAGCTTTATTCTGAA +
Preference number: 5 (lower is better)
Translates to: QVLVLSPEILSLVSHPLGPEVYP*EELYSE
Trigger: TTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGG...ACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCCTGTCGTCTCAACCTTaGGTGAATGACGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVLSSQP*VNDAMS
Trigger: ACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 5 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TCCAAATACCATTCCCCGAAGTTTATCCATTGGAGGAGCTTTATTCTGAAGGCCTTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: SKYHSPKFIHWRSFILKAFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...GGCCTTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp CAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGCAGGGCATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAA +
Preference number: 5 (lower is better)
Translates to: QSGKSPSWSSETEMQKAGHKIEW*FPVPSE
Trigger: TTCAGATGGGACTGGAAACAACCATTCAATTTTATG...CCCTGCTTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTAACCCCATCTCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 5 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSNPISI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGAGATGGGGTT...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR CAA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGTGTATTTCCCTTAGGTaGACAATCTTAGGTACCTTC +
Preference number: 5 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLCISLR*TILGTF
Trigger: GAAGGTACCTAAGATTGTCAACCTAAGGGAAATACA...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGGTGCTGACCTGGAATTaGTCATTAGTGAATAATGCA +
Preference number: 5 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLVLTWN*SLVNNA
Trigger: TGCATTATTCACTAATGACAAATTCCAGGTCAGCAC...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp TCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCGGTTGTGCTGTTATGTaGTCTGATTCATCTAAAACT +
Preference number: 5 (lower is better)
Translates to: SCPGTCIVPRNTQSGKSPGCAVM*SDSSKT
Trigger: AGTTTTAGATGAATCAGACAACATAACAGCACAACC...GGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp AGATGCAGAAAGCAGGGCATTCTTACTGAGACCAATGGCCTCTTCTCTCTGTCAGGTTGTGCTGTTATGTaGTCTGATTCATCTAAAACT +
Preference number: 5 (lower is better)
Translates to: RCRKQGILTETNGLFSLSGCAVM*SDSSKT
Trigger: AGTTTTAGATGAATCAGACAACATAACAGCACAACC...TGACAGAGAGAAGAGGCCATTGGTCTCAGTAAGAATGCCCTGCTTTCTGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCTGTAGCAAGTGTTCTTaGTTAATCTCAGGAGTCCAA +
Preference number: 5 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPCSKCS*LISGVQ
Trigger: TTGGACTCCTGAGATTAACAAAGAACACTTGCTACA...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CTTCTTGTAAATAGAATCAAGGGGCAACACCTGCTGACGACCTTGGGTTTCATCAGGTTGTTTTCAAATTaGAGCTATCAAGTCCAACCC +
Preference number: 5 (lower is better)
Translates to: LLVNRIKGQHLLTTLGFIRLFSN*SYQVQP
Trigger: GGGTTGGACTTGATAGCTCAAATTTGAAAACAACCT...GATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCTTGATTCTATTTACAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp TGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTGGCATGAGCTTTAAATaGCTAGCTTTTGTAAGACTT +
Preference number: 5 (lower is better)
Translates to: CPGTCIVPRNTQSGKSPSGMSFK*LAFVRL
Trigger: AAGTCTTACAAAAGCTAGCAATTTAAAGCTCATGCC...AGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAATGGTTCTAAGGTTCTaGATAAAAGTGGTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEEMVLRF*IKVVAG
Trigger: CCCGGCTACCACTTTTATCAAGAACCTTAGAACCAT...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp TTTTGGAACTGGAGCTCCAAATACCATTCCCCGAAGTTTATCCATTGGAGGAGCAAGTGCTGCCATTTGTaGCTGCTTCTTAACATCATT +
Preference number: 5 (lower is better)
Translates to: FWNWSSKYHSPKFIHWRSKCCHL*LLLNII
Trigger: AATGATGTTAAGAAGCAGCAACAAATGGCAGCACTT...GCTCCTCCAATGGATAAACTTCGGGGAATGGTATTTGGAGCTCCAGTTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp CTGTCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGTGTAAGTGCTGCCATTaGTTGCTGCTTCTTAACATC +
Preference number: 5 (lower is better)
Translates to: LSSQPLVNDAMSHYTYVWCKCCH*LLLLNI
Trigger: GATGTTAAGAAGCAGCAACAAATGGCAGCACTTACA...CCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACAATGTGTGGCACCTGTaGTGTTGTAGGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHNVWHL*CCRNVN
Trigger: ATTGACATTCCTACAACACAACAGGTGCCACACATT...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp TCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGCCCGAAGTTTATCCATaGGAGGAGCTTTATTCTGAA +
Preference number: 5 (lower is better)
Translates to: SSQPLVNDAMSHYTYVWEPEVYP*EELYSE
Trigger: TTCAGAATAAAGCTCCTCCAATGGATAAACTTCGGG...CTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp TCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTTCACACTGTCTAGTTaGCACACAGCAGAACGATAC +
Preference number: 5 (lower is better)
Translates to: SKWKFMPRYLYCPQKYSVFTLSS*HTAERY
Trigger: GTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAA...GACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp AATCTGTCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTACTGTCGTCTCAACCTTaGGTGAATGACGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: NLSSQPLVNDAMSHYTYVLSSQP*VNDAMS
Trigger: ACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG...TACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGACAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp GATCCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAATTCATGCCCAGGTACTaGTATTGTCCCCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: DPYSHCLVCTQQNDTAEEFMPRY*YCPQKY
Trigger: GTATTTCTGGGGACAATACAAGTACCTGGGCATGAA...TTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp GGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTTTCCTCTTACACATTaGCAAGGTAGTGACAACCAA +
Preference number: 5 (lower is better)
Translates to: GTCIVPRNTQSGKSPSWSFPLTH*QGSDNQ
Trigger: TTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAAA...AGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGGATAGTCTCAATGCCTaGGATTTAAAACATGACTCC +
Preference number: 5 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLDSLNA*DLKHDS
Trigger: GGAGTCATGTTTTAAATCCAAGGCATTGAGACTATC...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS GCA 90 bp CTTGCTTGCCCCCAACACCAAAATAGGAAATATCACTATTTAAACTaGGTGGCACTGGTACTGGACGAACATATCCTGAATGATCACTTT +
Preference number: 5 (lower is better)
Translates to: LACPQHQNRKYHYLN*VALVLDEHILNDHF
Trigger: AAAGTGATCATTCAGGATATGTTCGTCCAGTACCAGTGCCACGCAGTTTAAATAGTGATATTTCCTATTTTGGTGTTGGGGGCAAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp TATAATCTAATGTCTAAGGACTCCAAATATTGGTACGGGGTGAGTATCCCTAATCAACCAGGAGTTTCTTaGACCCTCCATGGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: YNLMSKDSKYWYGVSIPNQPGVS*TLHGLF
Trigger: GAACAAGCCATGGAGGGTCAAAGAAACTCCTGGTTG...ATTAGGGATACTCACCCCGTACCAATATTTGGAGTCCTTAGACATTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp CTTGGAATGAAACCTGGCAATAGCGCATATCTTTTACAGATGTTGGTACTTGCACATAGACTGGAAGGTTaGGAGCACCTGAAAACTTAC +
Preference number: 5 (lower is better)
Translates to: LGMKPGNSAYLLQMLVLAHRLEG*EHLKTY
Trigger: GTAAGTTTTCAGGTGCTCCAAACCTTCCAGTCTATG...TGCAAGTACCAACATCTGTAAAAGATATGCGCTATTGCCAGGTTTCATTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTGTAGCAAGTGTTCTTaGTTAATCTCAGGAGTCCAA +
Preference number: 5 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKCSKCS*LISGVQ
Trigger: TTGGACTCCTGAGATTAACAAAGAACACTTGCTACA...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CTTCTTGTAAATAGAATCAAGGGGCAACACCTGCTGACGACCTTGGGTTTCATCTATCTTTTACAGATGTaGGTACTTGCACATCAGGAA +
Preference number: 5 (lower is better)
Translates to: LLVNRIKGQHLLTTLGFIYLLQM*VLAHQE
Trigger: TTCCTGATGTGCAAGTACCAACATCTGTAAAAGATA...GATGAAACCCAAGGTCGTCAGCAGGTGTTGCCCCTTGATTCTATTTACAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp TCGTCTCAACCTTTGGTGAATGACGCAATGAGTCATTACACTTACGTATGGGAGAGGTTGTTTTCAAATTaGAGCTATCAAGTCCAACCC +
Preference number: 5 (lower is better)
Translates to: SSQPLVNDAMSHYTYVWERLFSN*SYQVQP
Trigger: GGGTTGGACTTGATAGCTCAAATTTGAAAACAACCT...CTCCCATACGTAAGTGTAATGACTCATTGCGTCATTCACCAAAGGTTGAGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCACTTATTTTAACATGTaGTACCGGTGCTGGATTATC +
Preference number: 5 (lower is better)
Translates to: PEILSLVSHPLGLLKQRCTYFNM*YRCWII
Trigger: GATAATCCAGCACCGGTACAACATGTTAAAATAAGT...GCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGGGCATGAGCTTTAAATaGCTAGCTTTTGTAAGACTT +
Preference number: 5 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLGMSFK*LAFVRL
Trigger: AAGTCTTACAAAAGCTAGCAATTTAAAGCTCATGCC...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTAAGTGCTGCCATTTGTaGCTGCTTCTTAACATCATT +
Preference number: 5 (lower is better)
Translates to: VLVLSPEILSLVSHPLGLKCCHL*LLLNII
Trigger: AATGATGTTAAGAAGCAGCAACAAATGGCAGCACTT...AAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGCACCTGCTGACGACCTaGGGTTTCATCATAGATACG +
Preference number: 5 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMHLLTT*GFIIDT
Trigger: CGTATCTATGATGAAACCCAAGGTCGTCAGCAGGTG...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWRSDTV*ELELQI
Trigger: TATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCT...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp CCAATAAAAAGTGGGGTATCAGTATCTTCCTCATTAGAGCCTTTAATGGTGGCTTTCACACTGTCTAGTTaGCACACAGCAGAACGATAC +
Preference number: 5 (lower is better)
Translates to: PIKSGVSVSSSLEPLMVAFTLSS*HTAERY
Trigger: GTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAA...AGCCACCATTAAAGGCTCTAATGAGGAAGATACTGATACCCCACTTTTTATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCCTGTCGTCTCAACCTTaGGTGAATGACGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSLSSQP*VNDAMS
Trigger: ACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TTGATTTTGGAACTTAATCTTGAATTTTGTCTCTCACGTTGCTGGCTACCCTCACTGTCGTCTCAACCTTaGGTGAATGACGCAATGAGT +
Preference number: 5 (lower is better)
Translates to: LILELNLEFCLSRCWLPSLSSQP*VNDAMS
Trigger: ACTCATTGCGTCATTCACCAAAGGTTGAGACGACAG...TGAGGGTAGCCAGCAACGTGAGAGACAAAATTCAAGATTAAGTTCCAAAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS-3UTR CAA 90 bp CTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGGGTTATAATCCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 5 (lower is better)
Translates to: LVLSPEILSLVSHPLGLLGYNPI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGGATTATAACC...CAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTTTTCCTCTTACACATTaGCAAGGTAGTGACAACCAA +
Preference number: 5 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCFPLTH*QGSDNQ
Trigger: TTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAAA...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCCATGAACCTCAGTATTaGCTCAAATGTAGAAAAGGA +
Preference number: 5 (lower is better)
Translates to: QSHLNRNGNSCPGTCIVPHEPQY*LKCRKG
Trigger: TCCTTTTCTACATTTGAGCAAATACTGAGGTTCATG...GGGGACAATACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp CACTGTTGCTGGGCATTCAATGAATTTTATTCATCCCTAGGAAATCCTCTTCCAGACCCCATCTCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 5 (lower is better)
Translates to: HCCWAFNEFYSSLGNPLPDPISI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGAGATGGGGTC...TGGAAGAGGATTTCCTAGGGATGAATAAAATTCATTGAATGCCCAGCAACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583800.1
CDS GCA 90 bp TGCTTATCATTCTGGCTGATTGTCCAACAAAGAAGACAGCTTGCTTaGCCCCAACACCAAAATAGGAAATATCACTATTTAAACTGCGTG +
Preference number: 5 (lower is better)
Translates to: CLSFWLIVQQRRQLA*PQHQNRKYHYLNCV
Trigger: CACGCAGTTTAAATAGTGATATTTCCTATTTTGGTGTTGGGGGCAAGCAAGCTGTCTTCTTTGTTGGACAATCAGCCAGAATGATAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGAACAAAGAAGACAGCTaGCTTGCCCCCAACACCAAA +
Preference number: 5 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMNKEDS*LAPNTK
Trigger: TTTGGTGTTGGGGGCAAGCAAGCTGTCTTCTTTGTT...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp CCAATAAAAAGTGGGGTATCAGTATCTTCCTCATTAGAGCCTTTAATGGTGGCTATCTATCAGGGAGCCTaGCCATTTCATCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: PIKSGVSVSSSLEPLMVAIYQGA*PFHLLH
Trigger: ATGTAGAAGATGAAATGGCAAGGCTCCCTGATAGAT...AGCCACCATTAAAGGCTCTAATGAGGAAGATACTGATACCCCACTTTTTATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp ATAAAATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCTTGACCCTCCATGGCTaGTTCCTGGAAGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: IKLNGCFQSHLNRNGNSCLTLHG*FLEAFA
Trigger: TGCAAAAGCTTCCAGGAACAAGCCATGGAGGGTCAA...GCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTGTAAAGATAAACCACTaGCTTCAAGAACTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: EIHAQVLVLSPEILSLVSVKINH*LQELAE
Trigger: TTCAGCCAGTTCTTGAAGCAAGTGGTTTATCTTTAC...ACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp ATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACGATCTGAATTGCCTTTaGTCCTTCTACACTGAATAT +
Preference number: 5 (lower is better)
Translates to: IHAQVLVLSPEILSLVSHDLNCL*SFYTEY
Trigger: ATATTCAGTGTAGAAGGACAAAAGGCAATTCAGATC...GTGACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGGGACCTGGAATAAATTaGATGCCTCTTACACTTATA +
Preference number: 5 (lower is better)
Translates to: GNSCPGTCIVPRNTQSGKGPGIN*MPLTLI
Trigger: TATAAGTGTAAGAGGCATCAAATTTATTCCAGGTCC...CTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGCCACTGATCACAAAGTaGAACAATAATAGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWPLITK*NNNRVL
Trigger: CAGAACCCTATTATTGTTCAACTTTGTGATCAGTGG...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp ATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAACTTATTTTAACATGTaGTACCGGTGCTGGATTATC +
Preference number: 5 (lower is better)
Translates to: IVPRNTQSGKSPSWSSETTYFNM*YRCWII
Trigger: GATAATCCAGCACCGGTACAACATGTTAAAATAAGT...TGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTGGCATGAGCTTTAAATaGCTAGCTTTTGTAAGACTT +
Preference number: 5 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCGMSFK*LAFVRL
Trigger: AAGTCTTACAAAAGCTAGCAATTTAAAGCTCATGCC...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CCAATAAAAAGTGGGGTATCAGTATCTTCCTCATTAGAGCCTTTAATGGTGGCTAATGTGTGGCACCTGTaGTGTTGTAGGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: PIKSGVSVSSSLEPLMVANVWHL*CCRNVN
Trigger: ATTGACATTCCTACAACACAACAGGTGCCACACATT...AGCCACCATTAAAGGCTCTAATGAGGAAGATACTGATACCCCACTTTTTATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp TCTCTCTGTCACCTCTCATACATCTGTTTTGGTTATAATCCTGTAATCCCAGTATTCACACTGTCTAGTTaGCACACAGCAGAACGATAC +
Preference number: 5 (lower is better)
Translates to: SLCHLSYICFGYNPVIPVFTLSS*HTAERY
Trigger: GTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAA...TACTGGGATTACAGGATTATAACCAAAACAGATGTATGAGAGGTGACAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642953.1
CDS-3UTR CAA 90 bp TGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGGGTTATAATCCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 5 (lower is better)
Translates to: WLFPVPSESKWKFMPRYLGYNPI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGGATTATAACC...CAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTGCCCAGGTACTTGTATaGTCCCCAGAAATACTCAGT +
Preference number: 5 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSAQVLV*SPEILS
Trigger: ACTGAGTATTTCTGGGGACAATACAAGTACCTGGGC...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAACATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAA +
Preference number: 5 (lower is better)
Translates to: CIVPRNTQSGKSPSWSSEHKIEW*FPVPSE
Trigger: TTCAGATGGGACTGGAAACAACCATTCAATTTTATG...TTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATTTCTGGGGACAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp GGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCCCAGGTACTTGTCATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAA +
Preference number: 5 (lower is better)
Translates to: GCFQSHLNRNGNSCPGTCHKIEW*FPVPSE
Trigger: TTCAGATGGGACTGGAAACAACCATTCAATTTTATG...ACAAGTACCTGGGCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp CCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTTCCTCTTACACATTaGCAAGGTAGTGACAACCAA +
Preference number: 5 (lower is better)
Translates to: PYSHCLVCTQQNDTAEEDFPLTH*QGSDNQ
Trigger: TTGGTTGTCACTACCTTGCAAATGTGTAAGAGGAAA...ATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS GCA 90 bp GCTTTGAATTCAAAACTATCAGCTGCTGTGTTTACATACAACGTCTaGATGTCGTCTTGTATTTCCCTTAGGTTGACAATCTTAGGTACC +
Preference number: 5 (lower is better)
Translates to: ALNSKLSAAVFTYNV*MSSCISLRLTILGT
Trigger: GGTACCTAAGATTGTCAACCTAAGGGAAATACAAGACGACATGCAGACGTTGTATGTAAACACAGCAGCTGATAGTTTTGAATTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp GAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTGTAGCAGACAATGAATaGTCAATTAATTCCGCAAGA +
Preference number: 5 (lower is better)
Translates to: EIHAQVLVLSPEILSLVSVADNE*SINSAR
Trigger: TCTTGCGGAATTAATTGACAATTCATTGTCTGCTAC...ACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCTATTGTAGCATTCAATaGGTGCAAGCCCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSYCSIQ*VQALSS
Trigger: AGAAGAGAGGGCTTGCACCAATTGAATGCTACAATA...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp AAATGGAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGGAATGTAAAATAACTTaGAGCTCAACCAGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: KWKFMPRYLYCPQKYSVWECKIT*SSTRSF
Trigger: GAAACTCCTGGTTGAGCTCAAAGTTATTTTACATTC...CCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GAAATTCATGCCCAGGTACTTGTATTGTCCCCAGAAATACTCAGTCTGGTAAGTGGTTGTGCTGTTATGTaGTCTGATTCATCTAAAACT +
Preference number: 5 (lower is better)
Translates to: EIHAQVLVLSPEILSLVSGCAVM*SDSSKT
Trigger: AGTTTTAGATGAATCAGACAACATAACAGCACAACC...ACTTACCAGACTGAGTATTTCTGGGGACAATACAAGTACCTGGGCATGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp CCTTATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATACTTATTTTAACATGTaGTACCGGTGCTGGATTATC +
Preference number: 5 (lower is better)
Translates to: PYSHCLVCTQQNDTAEEDTYFNM*YRCWII
Trigger: GATAATCCAGCACCGGTACAACATGTTAAAATAAGT...ATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp ATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAAATGGTTCTAAGGTTCTaGATAAAAGTGGTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: ICKVVTTKGHNVWNNSSKMVLRF*IKVVAG
Trigger: CCCGGCTACCACTTTTATCAAGAACCTTAGAACCAT...TTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GTACTTTTCTTCAGGATTAATAAATGCCATGTGCCAGTTTTACAGTCACTGCCAAATGTGTGGCACCTGTaGTGTTGTAGGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: VLFFRINKCHVPVLQSLPNVWHL*CCRNVN
Trigger: ATTGACATTCCTACAACACAACAGGTGCCACACATT...TGGCAGTGACTGTAAAACTGGCACATGGCATTTATTAATCCTGAAGAAAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAATGTGTGGCACCTGTaGTGTTGTAGGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: VTTKGHNVWNNSSKSIMSNVWHL*CCRNVN
Trigger: ATTGACATTCCTACAACACAACAGGTGCCACACATT...GGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp AATACTCAGTCTGGTAAGTCACCCTCTTGGTCTTCTGAAACAGAGATGCAGAAAGGTTATAATCCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 5 (lower is better)
Translates to: NTQSGKSPSWSSETEMQKGYNPI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGGATTATAACC...TTTCTGCATCTCTGTTTCAGAAGACCAAGAGGGTGACTTACCAGACTGAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp GTCACTTGCCAGATGCCAAGAAATAACCATCGCAGCTCTATCATCTTCAATTTGCATAAAATTGAATGGTaGTTTCCAGTCCCATCTGAA +
Preference number: 5 (lower is better)
Translates to: VTCQMPRNNHRSSIIFNLHKIEW*FPVPSE
Trigger: TTCAGATGGGACTGGAAACAACCATTCAATTTTATG...CAAATTGAAGATGATAGAGCTGCGATGGTTATTTCTTGGCATCTGGCAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp TTACACATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCGTAAAGATAAACCACTaGCTTCAAGAACTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: LHICKVVTTKGHNVWNNSVKINH*LQELAE
Trigger: TTCAGCCAGTTCTTGAAGCAAGTGGTTTATCTTTAC...GGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAATGTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS-3UTR CAA 90 bp TCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTATTCGATCTGAATTGCCTTTaGTCCTTCTACACTGAATAT +
Preference number: 5 (lower is better)
Translates to: SHCLVCTQQNDTAEEDLFDLNCL*SFYTEY
Trigger: ATATTCAGTGTAGAAGGACAAAAGGCAATTCAGATC...GAATAAATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CAA 90 bp TATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATCTAGGACCTGGAATAAATTaGATGCCTCTTACACTTATA +
Preference number: 5 (lower is better)
Translates to: YSHCLVCTQQNDTAEEDLGPGIN*MPLTLI
Trigger: TATAAGTGTAAGAGGCATCAAATTTATTCCAGGTCC...TAGATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp TATTCACACTGTCTAGTTTGCACACAGCAGAACGATACTGCTGAAGAAGATTTACCACTGATCACAAAGTaGAACAATAATAGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: YSHCLVCTQQNDTAEEDLPLITK*NNNRVL
Trigger: CAGAACCCTATTATTGTTCAACTTTGTGATCAGTGG...TAAATCTTCTTCAGCAGTATCGTTCTGCTGTGTGCAAACTAGACAGTGTGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS-3UTR CAA 90 bp CTCTATCATCTTCAATTTGTGCTAGATGTGCAATCTTTCCCAAAACATCTCCACCCACTGATCACAAAGTaGAACAATAATAGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LYHLQFVLDVQSFPKHLHPLITK*NNNRVL
Trigger: CAGAACCCTATTATTGTTCAACTTTGTGATCAGTGG...GTGGAGATGTTTTGGGAAAGATTGCACATCTAGCACAAATTGAAGATGATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584897.5
CDS-3UTR CAA 90 bp ATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATGTAAGTGCTGCCATTaGTTGCTGCTTCTTAACATC +
Preference number: 5 (lower is better)
Translates to: ICKVVTTKGHNVWNNSSKCKCCH*LLLLNI
Trigger: GATGTTAAGAAGCAGCAACAAATGGCAGCACTTACA...TTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTGTAAGTGCTGCCATTaGTTGCTGCTTCTTAACATC +
Preference number: 5 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMCKCCH*LLLLNI
Trigger: GATGTTAAGAAGCAGCAACAAATGGCAGCACTTACA...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000645355.1
CDS-3UTR CAA 90 bp GTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: VVTTKGHNVWNNSSKSIMRSDTV*ELELQI
Trigger: TATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCT...CATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
ENST00000642953.1
ENST00000645355.1
CDS-3UTR CAA 90 bp TTACACATTTGCAAGGTAGTGACAACCAAAGGGCATAATGTCTGGAATAATTCCGAATGTAAAATAACTTaGAGCTCAACCAGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: LHICKVVTTKGHNVWNNSECKIT*SSTRSF
Trigger: GAAACTCCTGGTTGAGCTCAAAGTTATTTTACATTC...GGAATTATTCCAGACATTATGCCCTTTGGTTGTCACTACCTTGCAAATGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TATAATCTAATGTCTAAGGACTCCAAATATTGGTACGGGGTGAGTATCCCTAATAAATGGCAAAGGATTTaGTCCTTCACTGGCATAATA +
Preference number: 5 (lower is better)
Translates to: YNLMSKDSKYWYGVSIPNKWQRI*SFTGII
Trigger: TATTATGCCAGTGAAGGACAAAATCCTTTGCCATTT...ATTAGGGATACTCACCCCGTACCAATATTTGGAGTCCTTAGACATTAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp ACAACCAAAGGGCATAATGTCTGGAATAATTCCAGTAAATCCATAATGTCCAGTTATCTTTTACAGATGTaGGTACTTGCACATCAGGAA +
Preference number: 5 (lower is better)
Translates to: TTKGHNVWNNSSKSIMSSYLLQM*VLAHQE
Trigger: TTCCTGATGTGCAAGTACCAACATCTGTAAAAGATA...ACTGGACATTATGGATTTACTGGAATTATTCCAGACATTATGCCCTTTGGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS-3UTR CAA 90 bp TATAATCTAATGTCTAAGGACTCCAAATATTGGTACGGGGTGAGTATCCCTAATGGACCTGGAATAAATTaGATGCCTCTTACACTTATA +
Preference number: 5 (lower is better)
Translates to: YNLMSKDSKYWYGVSIPNGPGIN*MPLTLI
Trigger: TATAAGTGTAAGAGGCATCAAATTTATTCCAGGTCC...ATTAGGGATACTCACCCCGTACCAATATTTGGAGTCCTTAGACATTAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp TATAATCTAATGTCTAAGGACTCCAAATATTGGTACGGGGTGAGTATCCCTAATGGTTATAATCCTATTTaGTCTTGTAGCTTCTCGTCT +
Preference number: 5 (lower is better)
Translates to: YNLMSKDSKYWYGVSIPNGYNPI*SCSFSS
Trigger: AGACGAGAAGCTACAAGACAAAATAGGATTATAACC...ATTAGGGATACTCACCCCGTACCAATATTTGGAGTCCTTAGACATTAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS-3UTR CAA 90 bp ATAAAATTGAATGGTTGTTTCCAGTCCCATCTGAATCGAAATGGAAATTCATGCGATCTGAATTGCCTTTaGTCCTTCTACACTGAATAT +
Preference number: 5 (lower is better)
Translates to: IKLNGCFQSHLNRNGNSCDLNCL*SFYTEY
Trigger: ATATTCAGTGTAGAAGGACAAAAGGCAATTCAGATC...GCATGAATTTCCATTTCGATTCAGATGGGACTGGAAACAACCATTCAATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320876.11
ENST00000577880.5
ENST00000584897.5
CDS GCA 72 bp GCGAGGATCACCCGGGAACCGATTCAAACGCGCTCCTaGCCGTGCACCACGTCACTTCCGCGGCCCGCCACT +
Preference number: 6 (lower is better)
Translates to: ARITREPIQTRS*PCTTSLPRPAT
Trigger: AGTGGCGGGCCGCGGAAGTGACGTGGTGCACGGGCAGGAGCGCGTTTGAATCGGTTCCCGGGTGATCCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS GCA 72 bp ATCACCCGGGAACCGATTCAAACGCGCTCCTGCCCGTaGACCACGTCACTTCCGCGGCCCGCCACTCCTGAG +
Preference number: 6 (lower is better)
Translates to: ITREPIQTRSCP*TTSLPRPATPE
Trigger: CTCAGGAGTGGCGGGCCGCGGAAGTGACGTGGTGCACGGGCAGGAGCGCGTTTGAATCGGTTCCCGGGTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS CCA 72 bp TCCTTTTCGCGCCGATCAAACAAGTACACCGTCCTGTaGCCGACGCCTCCGCCATCCTCCTCAGTCCCCACA +
Preference number: 6 (lower is better)
Translates to: SFSRRSNKYTVL*PTPPPSSSVPT
Trigger: TGTGGGGACTGAGGAGGATGGCGGAGGCGTCGGCCACAGGACGGTGTACTTGTTTGATCGGCGCGAAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS CAA 90 bp GAACACAGGCATGCACTATTTGTTCCCCTAAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATACCATTCCCCGAAGTTTATCCATTG +
Preference number: 6 (lower is better)
Translates to: EHRHALFVPLRSDTV*ELELQIPFPEVYPL
Trigger: CAATGGATAAACTTCGGGGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCTTAGGGGAACAAATAGTGCATGCCTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS CAA 72 bp CATGCACTATTTGTTCCCCTAAGATCAGACACTGTTTaGGAACTGGAGCTCCAAATACCATTCCCCGAAGTT +
Preference number: 6 (lower is better)
Translates to: HALFVPLRSDTV*ELELQIPFPEV
Trigger: AACTTCGGGGAATGGTATTTGGAGCTCCAGTTCCAAAACAGTGTCTGATCTTAGGGGAACAAATAGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577880.5
CDS TCA 72 bp AAGTCAATTCGTTCTTTCGTAGCTGTCAGTAGTAACTaGTTGACCGACTGTAGCAGGTATAAGGTGACTCCA +
Preference number: 6 (lower is better)
Translates to: KSIRSFVAVSSN*LTDCSRYKVTP
Trigger: TGGAGTCACCTTATACCTGCTACAGTCGGTCAATCAGTTACTACTGACAGCTACGAAAGAACGAATTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS GCA 72 bp CCCCAACACCAAAATAGGAAATATCACTATTTAAACTaGGTGGCACTGGTACTGGACGAACATATCCTGAAT +
Preference number: 6 (lower is better)
Translates to: PQHQNRKYHYLN*VALVLDEHILN
Trigger: ATTCAGGATATGTTCGTCCAGTACCAGTGCCACGCAGTTTAAATAGTGATATTTCCTATTTTGGTGTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS CCA 72 bp ACCAAATTCATCCTGAAACTCCAGAGGGATATTAAATaGAACTCCAACACGAAAAGGAAGATCCAGAAGACC +
Preference number: 6 (lower is better)
Translates to: TKFILKLQRDIK*NSNTKRKIQKT
Trigger: GGTCTTCTGGATCTTCCTTTTCGTGTTGGAGTTCCATTTAATATCCCTCTGGAGTTTCAGGATGAATTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320876.11
ENST00000577880.5
CDS CAA 72 bp TGCCTTGTGAATTTTGACAACCTATACACGGCCCAGTaGTTAAGCTGTTTAGAGGTCATTCCTCTTCCATTA +
Preference number: 6 (lower is better)
Translates to: CLVNFDNLYTAQ*LSCLEVIPLPL
Trigger: TAATGGAAGAGGAATGACCTCTAAACAGCTTAACAACTGGGCCGTGTATAGGTTGTCAAAATTCACAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS CAA 90 bp AAGTCACCTTGCCTTGTGAATTTTGACAACCTATACACGGCCCAGTaGTTAAGCTGTTTAGAGGTCATTCCTCTTCCATTATCTATCACT +
Preference number: 6 (lower is better)
Translates to: KSPCLVNFDNLYTAQ*LSCLEVIPLPLSIT
Trigger: AGTGATAGATAATGGAAGAGGAATGACCTCTAAACAGCTTAACAACTGGGCCGTGTATAGGTTGTCAAAATTCACAAGGCAAGGTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS TCA 72 bp TCCCTTCCACTACACCATCTCCTTCAACATGAGCTTTaGATTCAAAACTATCAGCTGCTGTGTTTACATACA +
Preference number: 6 (lower is better)
Translates to: SLPLHHLLQHEL*IQNYQLLCLHT
Trigger: TGTATGTAAACACAGCAGCTGATAGTTTTGAATTCAAAGCTCATGTTGAAGGAGATGGTGTAGTGGAAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS CAA 72 bp CTAACCCCAATGTTACGAGAAGTAGCAGACAATGAATaGTCAATTAATTCCGCAAGAGCAAATGGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: LTPMLREVADNE*SINSARANGKG
Trigger: TCCTTTGCCATTTGCTCTTGCGGAATTAATTGACAATTCATTGTCTGCTACTTCTCGTAACATTGGGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320876.11
CDS TCA 72 bp GGCCAAGTTACTGACAATCTATCAGGGAGCCTGTTATaGAACCAGCATATTAATGTTCCACAAACTTTGTTA +
Preference number: 6 (lower is better)
Translates to: GQVTDNLSGSLL*NQHINVPQTLL
Trigger: TAACAAAGTTTGTGGAACATTAATATGCTGGTTTCATAACAGGCTCCCTGATAGATTGTCAGTAACTTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581711.1
CDS CAA 90 bp TGTATTCTTCTAACCCCAATGTTACGAGAAGTAGCAGACAATGAATaGTCAATTAATTCCGCAAGAGCAAATGGCAAAGGATTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: CILLTPMLREVADNE*SINSARANGKGFCP
Trigger: AGGACAAAATCCTTTGCCATTTGCTCTTGCGGAATTAATTGACAATTCATTGTCTGCTACTTCTCGTAACATTGGGGTTAGAAGAATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320876.11