Pregenerated sensors for SMC5-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000268364Ensembl transcript IDs: ENST00000594708.1, ENST00000656832.1, ENST00000664022.1, ENST00000670800.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCTGGAAGGGGTGGGAGCAAGCAGGGCCTGACGTCCTCCCGCCTTaGCGGCCGTGGACGCCCCAGGTGCCACCCACAGCAGCCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: TWKGWEQAGPDVLPP*RPWTPQVPPTAASH Trigger: GTGGGAGGCTGCTGTGGGTGGCACCTGGGGCGTCCACGGCCGCCAAGGCGGGAGGACGTCAGGCCCTGCTTGCTCCCACCCCTTCCAGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS CCA 90 bp | AAGAGCCAACGACGGGCGTGCCCGGGAGCTCTCACCTGGAAGGGGTaGGAGCAAGCAGGGCCTGACGTCCTCCCGCCTTGGCGGCCGTGG | + |
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Preference number: 5 (lower is better) Translates to: KSQRRACPGALTWKG*EQAGPDVLPPWRPW Trigger: CCACGGCCGCCAAGGCGGGAGGACGTCAGGCCCTGCTTGCTCCCACCCCTTCCAGGTGAGAGCTCCCGGGCACGCCCGTCGTTGGCTCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS CCA 90 bp | AAGAGGACGAAGAGCCAACGACGGGCGTGCCCGGGAGCTCTCACCTaGAAGGGGTGGGAGCAAGCAGGGCCTGACGTCCTCCCGCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: KRTKSQRRACPGALT*KGWEQAGPDVLPPW Trigger: CCAAGGCGGGAGGACGTCAGGCCCTGCTTGCTCCCACCCCTTCCAGGTGAGAGCTCCCGGGCACGCCCGTCGTTGGCTCTTCGTCCTCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS TCA 90 bp | CGGCCATATGCCCAGGGTGCTATGGGAGGGCCTCTTGGGGGAATCTaGCCTGGCAGGGCAGAGGCAGCCTCCTGGCTGCAGTCTAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RPYAQGAMGGPLGGI*PGRAEAASWLQSRE Trigger: CTCCCTAGACTGCAGCCAGGAGGCTGCCTCTGCCCTGCCAGGTCAGATTCCCCCAAGAGGCCCTCCCATAGCACCCTGGGCATATGGCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS CCA 90 bp | TGGCCTTTCTTGGTGTGTGCGCCTGGCAGGGCAGAGGCAGCCTCCTaGCTGCAGTCTAGGGAGAGCAGTGGAAAGCAGCAGTGCCCACTC | + |
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Preference number: 5 (lower is better) Translates to: WPFLVCAPGRAEAAS*LQSRESSGKQQCPL Trigger: GAGTGGGCACTGCTGCTTTCCACTGCTCTCCCTAGACTGCAGCCAGGAGGCTGCCTCTGCCCTGCCAGGCGCACACACCAAGAAAGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664022.1 |
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| CDS CCA 90 bp | AAGTACAAAACGGCCATATGCCCAGGGTGCTATGGGAGGGCCTCTTaGGGGAATCTGACCTGGCAGGGCAGAGGCAGCCTCCTGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: KYKTAICPGCYGRAS*GNLTWQGRGSLLAA Trigger: TGCAGCCAGGAGGCTGCCTCTGCCCTGCCAGGTCAGATTCCCCCAAGAGGCCCTCCCATAGCACCCTGGGCATATGGCCGTTTTGTACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS TCA 90 bp | AGGGAGAGCAGTGGAAAGCAGCAGTGCCCACTCGCACAGTGTCCCTaGTGCCTTCATGTCTTCTCTCACACTCTGAGGGCTAAGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: RESSGKQQCPLAQCP*CLHVFSHTLRAKTW Trigger: CCAGGTCTTAGCCCTCAGAGTGTGAGAGAAGACATGAAGGCATCAGGGACACTGTGCGAGTGGGCACTGCTGCTTTCCACTGCTCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS TCA 90 bp | GGACGCCCCAGGTGCCACCCACAGCAGCCTCCCACCACACATGACTaGGGCTCGGGAAGCAATAAAGTGGCTTTCAAAATACTAAACGCA | + |
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Preference number: 5 (lower is better) Translates to: GRPRCHPQQPPTTHD*GSGSNKVAFKILNA Trigger: TGCGTTTAGTATTTTGAAAGCCACTTTATTGCTTCCCGAGCCTCAGTCATGTGTGGTGGGAGGCTGCTGTGGGTGGCACCTGGGGCGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS TCA 90 bp | AGTAGCAATGAGGTTAACCTGTGCAGTGTAGTCATTTCACGAGTTTaGGAACGCCTAGCACGATGCCTTAACGGAGCGTCGGGCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: SSNEVNLCSVVISRV*ERLARCLNGASGTE Trigger: CTCTGTGCCCGACGCTCCGTTAAGGCATCGTGCTAGGCGTTCTCAAACTCGTGAAATGACTACACTGCACAGGTTAACCTCATTGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS CCA 90 bp | TGCATTCACCTCAAGGCTACTACATGTACATTGAGGCCTCCCATATaGTGTATGGACAAAAAGCACGCCTCTTGTCCAGGCCTCTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: CIHLKATTCTLRPPI*CMDKKHASCPGLCE Trigger: CTCGCAGAGGCCTGGACAAGAGGCGTGCTTTTTGTCCATACACCATATGGGAGGCCTCAATGTACATGTAGTAGCCTTGAGGTGAATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS GCA 90 bp | CCAAAACTCTCACAGTTGTGGAGGCTGGAAAGTCCAACATCAAGGTaGCAGCTGTTTCAGTTCCTGGTGAGGGCTCTTTTCCTAGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: PKLSQLWRLESPTSR*QLFQFLVRALFLVC Trigger: GCAAACTAGGAAAAGAGCCCTCACCAGGAACTGAAACAGCTGGCACCTTGATGTTGGACTTTCCAGCCTCCACAACTGTGAGAGTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000664022.1 |
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| CDS GCA 90 bp | ACTTACCTCTCACAGTTGTGGAGGCTGGAAAGTCCAACATCAAGGTaGCAGCTGTTTCAGTTCCTGGTGAGGGCTCTTTTCCTAGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: TYLSQLWRLESPTSR*QLFQFLVRALFLVC Trigger: GCAAACTAGGAAAAGAGCCCTCACCAGGAACTGAAACAGCTGGCACCTTGATGTTGGACTTTCCAGCCTCCACAACTGTGAGAGGTAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656832.1 |
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| CDS TCA 90 bp | TGTGCGCCTGCTTTTGCATTCACCTCAAGGCTACTACATGTACATTaGGGCCTCCCATATGGTGTATGGACAAAAAGCACGCCTCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: CAPAFAFTSRLLHVH*GLPYGVWTKSTPLV Trigger: GACAAGAGGCGTGCTTTTTGTCCATACACCATATGGGAGGCCTCAATGTACATGTAGTAGCCTTGAGGTGAATGCAAAAGCAGGCGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS TCA 90 bp | CAGGAAGATGCAGCCCTTGTTAGACAAGCAAACTTGTTGGCACCTTaGTCTTGGACTTACCAGCCTCCAAAACTCTCACAGTTGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QEDAALVRQANLLAP*SWTYQPPKLSQLWR Trigger: CCTCCACAACTGTGAGAGTTTTGGAGGCTGGTAAGTCCAAGATCAAGGTGCCAACAAGTTTGCTTGTCTAACAAGGGCTGCATCTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000664022.1 |
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| CDS TCA 90 bp | CTTTCCAAATTCTACAGTACAGCATGGTATGGAAAGACCAAACAATaGGCTGCCTCTGCCATTTGCTGCCTGCATAACCTGGGGAATAAT | + |
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Preference number: 5 (lower is better) Translates to: LSKFYSTAWYGKTKQ*AASAICCLHNLGNN Trigger: ATTATTCCCCAGGTTATGCAGGCAGCAAATGGCAGAGGCAGCTCATTGTTTGGTCTTTCCATACCATGCTGTACTGTAGAATTTGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000664022.1 |
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| CDS GCA 90 bp | AAATCTATGCTCCAGGCATTGTACGGAGCATGGAGGTTACAAAAATaGTCACAGATTAGTGAGGGAGAGAGAGAGAAACCAGTCAACACA | + |
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Preference number: 5 (lower is better) Translates to: KSMLQALYGAWRLQK*SQISEGEREKPVNT Trigger: TGTGTTGACTGGTTTCTCTCTCTCTCCCTCACTAATCTGTGAGCATTTTTGTAACCTCCATGCTCCGTACAATGCCTGGAGCATAGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS CCA 90 bp | CAAAGATTTCTTGAGAAATCTATGCTCCAGGCATTGTACGGAGCATaGAGGTTACAAAAATGCTCACAGATTAGTGAGGGAGAGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: QRFLEKSMLQALYGA*RLQKCSQISEGERE Trigger: CTCTCTCTCTCCCTCACTAATCTGTGAGCATTTTTGTAACCTCCATGCTCCGTACAATGCCTGGAGCATAGATTTCTCAAGAAATCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS CCA 72 bp | GGGTGGGAGCAAGCAGGGCCTGACGTCCTCCCGCCTTaGCGGCCGTGGACGCCCCAGGTGCCACCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: GWEQAGPDVLPP*RPWTPQVPPTA Trigger: TGCTGTGGGTGGCACCTGGGGCGTCCACGGCCGCCAAGGCGGGAGGACGTCAGGCCCTGCTTGCTCCCACCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS CCA 72 bp | CGACGGGCGTGCCCGGGAGCTCTCACCTGGAAGGGGTaGGAGCAAGCAGGGCCTGACGTCCTCCCGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RRACPGALTWKG*EQAGPDVLPPW Trigger: CCAAGGCGGGAGGACGTCAGGCCCTGCTTGCTCCCACCCCTTCCAGGTGAGAGCTCCCGGGCACGCCCGTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS CCA 72 bp | AAGAGCCAACGACGGGCGTGCCCGGGAGCTCTCACCTaGAAGGGGTGGGAGCAAGCAGGGCCTGACGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: KSQRRACPGALT*KGWEQAGPDVL Trigger: GAGGACGTCAGGCCCTGCTTGCTCCCACCCCTTCCAGGTGAGAGCTCCCGGGCACGCCCGTCGTTGGCTCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS GCA 72 bp | AAGAACACCAAGAGGACGAAGAGCCAACGACGGGCGTaGCCGGGAGCTCTCACCTGGAAGGGGTGGGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: KNTKRTKSQRRA*PGALTWKGWEQ Trigger: TTGCTCCCACCCCTTCCAGGTGAGAGCTCCCGGGCACGCCCGTCGTTGGCTCTTCGTCCTCTTGGTGTTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS TCA 72 bp | AGTGGAAAGCAGCAGTGCCCACTCGCACAGTGTCCCTaGTGCCTTCATGTCTTCTCTCACACTCTGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGKQQCPLAQCP*CLHVFSHTLRA Trigger: AGCCCTCAGAGTGTGAGAGAAGACATGAAGGCATCAGGGACACTGTGCGAGTGGGCACTGCTGCTTTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS GCA 72 bp | ACTGAATGCCGAAATATACGGAGAAGAAACTCCAGTTaGCACGTCCCCGAACGTCTCCACCCAGTCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: TECRNIRRRNSS*HVPERLHPVLP Trigger: AGGCAGGACTGGGTGGAGACGTTCGGGGACGTGGCAACTGGAGTTTCTTCTCCGTATATTTCGGCATTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS GCA 72 bp | AACACAGTTCGGAGTGCTAAGTACAAAACGGCCATATaGCCAGGGTGCTATGGGAGGGCCTCTTGGGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: NTVRSAKYKTAI*PGCYGRASWGN Trigger: ATTCCCCCAAGAGGCCCTCCCATAGCACCCTGGGCATATGGCCGTTTTGTACTTAGCACTCCGAACTGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS CAA 72 bp | GAGGGCTCTTTTCCTAGTTTGCAGACAGGCACCATCTaGCTGTGTGCCCACATGGCCTTTCTTGGTGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: EGSFPSLQTGTI*LCAHMAFLGVC Trigger: GCACACACCAAGAAAGGCCATGTGGGCACACAGCAAGATGGTGCCTGTCTGCAAACTAGGAAAAGAGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000594708.1 ENST00000656832.1 ENST00000664022.1 |
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| CDS TCA 72 bp | GAGGTTAACCTGTGCAGTGTAGTCATTTCACGAGTTTaGGAACGCCTAGCACGATGCCTTAACGGAGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: EVNLCSVVISRV*ERLARCLNGAS Trigger: CGACGCTCCGTTAAGGCATCGTGCTAGGCGTTCTCAAACTCGTGAAATGACTACACTGCACAGGTTAACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS GCA 72 bp | TCACAGTTGTGGAGGCTGGAAAGTCCAACATCAAGGTaGCAGCTGTTTCAGTTCCTGGTGAGGGCTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SQLWRLESPTSR*QLFQFLVRALF Trigger: GAAAAGAGCCCTCACCAGGAACTGAAACAGCTGGCACCTTGATGTTGGACTTTCCAGCCTCCACAACTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000594708.1 ENST00000656832.1 ENST00000664022.1 |
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| CDS CCA 72 bp | AGCACGCCTCTTGTCCAGGCCTCTGCGAGGAGTCTCTaGAAAACACTGCTTGACCTTTTTCTACCACATGTA | + |
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Preference number: 6 (lower is better) Translates to: STPLVQASARSL*KTLLDLFLPHV Trigger: TACATGTGGTAGAAAAAGGTCAAGCAGTGTTTTCCAGAGACTCCTCGCAGAGGCCTGGACAAGAGGCGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS CCA 72 bp | TCTTGGACTTACCAGCCTCCAAAACTCTCACAGTTGTaGAGGCTGGAAAGTCCAACATCAAGGTGCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SWTYQPPKLSQL*RLESPTSRCQL Trigger: CAGCTGGCACCTTGATGTTGGACTTTCCAGCCTCCACAACTGTGAGAGTTTTGGAGGCTGGTAAGTCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000664022.1 |
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| CDS CCA 72 bp | CTCAAGGCTACTACATGTACATTGAGGCCTCCCATATaGTGTATGGACAAAAAGCACGCCTCTTGTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LKATTCTLRPPI*CMDKKHASCPG Trigger: GCCTGGACAAGAGGCGTGCTTTTTGTCCATACACCATATGGGAGGCCTCAATGTACATGTAGTAGCCTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS CAA 72 bp | TGCCCACATGGCCTTTCTTGGTGTGTGCGCCTGCTTTaGCATTCACCTCAAGGCTACTACATGTACATTGAG | + |
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Preference number: 6 (lower is better) Translates to: CPHGLSWCVRLL*HSPQGYYMYIE Trigger: CTCAATGTACATGTAGTAGCCTTGAGGTGAATGCAAAAGCAGGCGCACACACCAAGAAAGGCCATGTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS CAA 90 bp | GTGTGCGCCTGCTTTTGCATTCACCTCAAGGCTACTACATGTACATaGAGGCCTCCCATATGGTGTATGGACAAAAAGCACGCCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VCACFCIHLKATTCT*RPPIWCMDKKHASC Trigger: ACAAGAGGCGTGCTTTTTGTCCATACACCATATGGGAGGCCTCAATGTACATGTAGTAGCCTTGAGGTGAATGCAAAAGCAGGCGCACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS CCA 72 bp | CTTGACCTTTTTCTACCACATGTATGGAGGGGGCACTaGCCTGCTGAGTGTTTATCTCTGTCTCTGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LDLFLPHVWRGH*PAECLSLSLFG Trigger: ACCAAACAGAGACAGAGATAAACACTCAGCAGGCCAGTGCCCCCTCCATACATGTGGTAGAAAAAGGTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS CAA 72 bp | CACGATGCCTTAACGGAGCGTCGGGCACAGAGTCATTaGGGAGGATTTCTTTTTCGGATTTTTGAGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: HDALTERRAQSH*GGFLFRIFETG Trigger: TCCTGTCTCAAAAATCCGAAAAAGAAATCCTCCCAAATGACTCTGTGCCCGACGCTCCGTTAAGGCATCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000670800.1 |
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| CDS CAA 72 bp | AGACATAGCGTTCCTCCCCTCAGGAAGATGCAGCCCTaGTTAGACAAGCAAACTTGTTGGCACCTTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: RHSVPPLRKMQP*LDKQTCWHLDL Trigger: AAGATCAAGGTGCCAACAAGTTTGCTTGTCTAACAAGGGCTGCATCTTCCTGAGGGGAGGAACGCTATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594708.1 ENST00000664022.1 |
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| CDS CAA 72 bp | CTGGGCTCTGTGACTTCTTGGTCTCATGCCAGGGACTaGTGTGATTTAACCAGAACTCTGTCTCTGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LGSVTSWSHARD*CDLTRTLSLFG Trigger: ACCAAACAGAGACAGAGTTCTGGTTAAATCACACAAGTCCCTGGCATGAGACCAAGAAGTCACAGAGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS GCA 72 bp | CTCCAGGCATTGTACGGAGCATGGAGGTTACAAAAATaGTCACAGATTAGTGAGGGAGAGAGAGAGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: LQALYGAWRLQK*SQISEGEREKP Trigger: TGGTTTCTCTCTCTCTCCCTCACTAATCTGTGAGCATTTTTGTAACCTCCATGCTCCGTACAATGCCTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670800.1 |
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| CDS TCA 72 bp | GCTTTTGCATTCACCTCAAGGCTACTACATGTACATTaGGGCCTCCCATATGGTGTATGGACAAAAAGCACG | + |
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Preference number: 6 (lower is better) Translates to: AFAFTSRLLHVH*GLPYGVWTKST Trigger: CGTGCTTTTTGTCCATACACCATATGGGAGGCCTCAATGTACATGTAGTAGCCTTGAGGTGAATGCAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594708.1 |
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| CDS CCA 72 bp | AAACAACAGAAACTTACCTCTCACAGTTGTGGAGGCTaGAAAGTCCAACATCAAGGTGCCAGCTGTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KQQKLTSHSCGG*KVQHQGASCFS Trigger: ACTGAAACAGCTGGCACCTTGATGTTGGACTTTCCAGCCTCCACAACTGTGAGAGGTAAGTTTCTGTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656832.1 |
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