RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000113810

Ensembl transcript IDs: ENST00000344722.5, ENST00000357388.8, ENST00000462668.5, ENST00000462787.5, ENST00000465903.5, ENST00000468653.5, ENST00000469762.5, ENST00000469858.5, ENST00000472991.5, ENST00000484799.1, ENST00000485645.5, ENST00000485867.5, ENST00000486711.1, ENST00000488017.1, ENST00000489573.5, ENST00000490207.5, ENST00000497311.5, ENST00000497984.5

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTaGAATGCCTTAAAGAATCTATCCAAGATTAGTTGGCAGGCATTT +
Preference number: 1 (lower is better)
Translates to: YLGNNCGDCLNWQAK*NALKNLSKISWQAF
Trigger: AAATGCCTGCCAACTAATCTTGGATAGATTCTTTAAGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR TCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTCCCACGAAGGTATGCTaGGCCTTGATAGCACAACCT +
Preference number: 2 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCPTKVC*ALIAQP
Trigger: AGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGG...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTGGTGATTGTCTCAACTaGCAAGCTAAGTGGAATGCC +
Preference number: 2 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLGDCLN*QAKWNA
Trigger: GGCATTCCACTTAGCTTGCCAGTTGAGACAATCACC...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR CAA 90 bp AAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTaGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: KSKAHEGMLSLDSTT*LRTLPQLTYFLVWQ
Trigger: TTGCCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR TCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCAGAAACCAGTTTCATaGTCTAGTTTAGGGAGTATG +
Preference number: 2 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPQKPVS*SSLGSM
Trigger: CATACTCCCTAAACTAGATCATGAAACTGGTTTCTG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCTATCCAAGATTAGTTaGCAGGCATTTCCAGTGTTG +
Preference number: 2 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLLSKIS*QAFPVL
Trigger: CAACACTGGAAATGCCTGCCAACTAATCTTGGATAG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CCA 90 bp CCATCTTCTATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCTCATCGTGTTCAGTCTaGCCTTTTGGTTTCATCATA +
Preference number: 2 (lower is better)
Translates to: PSSIFLICYSCGLIQVVSSSCSV*PFGFII
Trigger: TATGATGAAACCAAAAGGCCAGACTGAACACGATGA...GCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATAGAAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469858.5
3UTR-3UTR GCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTTTGATAGCACAACCTTaGTTAGGACTTTGCCTCAAC +
Preference number: 2 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCLIAQP*LGLCLN
Trigger: GTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATCAA...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR TCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTCAGAAACCAGTTTCATaGTCTAGTTTAGGGAGTATG +
Preference number: 2 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCQKPVS*SSLGSM
Trigger: CATACTCCCTAAACTAGATCATGAAACTGGTTTCTG...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CCA 90 bp TATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCTACTAAGGATATCAAGTTCTGACTaGGCTACATCCATCTTTGAA +
Preference number: 2 (lower is better)
Translates to: YLFDMLLLWLDPSCQLLRISSSD*ATSIFE
Trigger: TTCAAAGATGGATGTAGCCCAGTCAGAACTTGATAT...CCTTAGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
3UTR TCA 72 bp CCAGTGTTGGTAAATCAAAGGCCCACGAAGGTATGCTaGGCCTTGATAGCACAACCTTGCTTAGGACTTTGC +
Preference number: 3 (lower is better)
Translates to: PVLVNQRPTKVC*ALIAQPCLGLC
Trigger: GCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACCAACACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CAA 90 bp CAATGGCTCCTAAGTCCCCCAATCTTCCATATATTCCTGGAATCCTGCCAGATTTCCTTCTCGAGGGCATaGTTTCTGGTTGTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: QWLLSPPIFHIFLESCQISFSRA*FLVVVS
Trigger: TGAAACAACAACCAGAAACAATGCCCTCGAGAAGGA...AATCTGGCAGGATTCCAGGAATATATGGAAGATTGGGGGACTTAGGAGCCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
3UTR-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACAGGCATTTCCAGTGTaGGTAAATCAAAGGCCCACG +
Preference number: 3 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGQAFPV*VNQRPT
Trigger: CGTGGGCCTTTGATTTACCAACACTGGAAATGCCTG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCTTGATAGCACAACCTaGCTTAGGACTTTGCCTCAA +
Preference number: 3 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPLDSTT*LRTLPQ
Trigger: TTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CAA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCTTGATAGCACAACCTaGCTTAGGACTTTGCCTCAA +
Preference number: 3 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLLDSTT*LRTLPQ
Trigger: TTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CAA 90 bp TATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCTACTAAGGGGGCTACATCCATCTTaGAACGTGCTTCATTTACCG +
Preference number: 3 (lower is better)
Translates to: YLFDMLLLWLDPSCQLLRGLHPS*NVLHLP
Trigger: CGGTAAATGAAGCACGTTCAAAGATGGATGTAGCCC...CCTTAGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469858.5
3UTR TCA 72 bp ATCAACAACAATGTAGTCCAGTGCATGACAACAGGATaGTATAGCCACGTCGTATTTTTCATCAATGGCTCC +
Preference number: 3 (lower is better)
Translates to: INNNVVQCMTTG*YSHVVFFINGS
Trigger: GGAGCCATTGATGAAAAATACGACGTGGCTATATCATCCTGTTGTCATGCACTGGACTACATTGTTGTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
3UTR-3UTR CAA 90 bp CCTGACTGTTCTATGATTTGTCCCTGTAAAGTTACCACTCTCCATCTTCTATCTCCCTACTTCGATTCATaGCTAATGAGCTCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: PDCSMICPCKVTTLHLLSPYFDS*LMSSLL
Trigger: AAGCAAAGAGCTCATTAGCAATGAATCGAAGTAGGG...AGATAGAAGATGGAGAGTGGTAACTTTACAGGGACAAATCATAGAACAGTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
3UTR-3UTR CAA 90 bp TTTACCTCTTCTTCAGAGATTTCAATAACAAGTGAGGAACCCATTCTTCCTTTCTGCTACTCTTGTGGCTaGATCCAAGTTGTCAGCTAC +
Preference number: 3 (lower is better)
Translates to: FTSSSEISITSEEPILPFCYSCG*IQVVSY
Trigger: GTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCA...GAAAGGAAGAATGGGTTCCTCACTTGTTATTGAAATCTCTGAAGAAGAGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
3UTR-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTAACATACTTTTTAGTTaGGCAAGTTACCTGACCCTC +
Preference number: 3 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCNILFS*ASYLTL
Trigger: GAGGGTCAGGTAACTTGCCAAACTAAAAAGTATGTT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTACCTTGCTTAGGACTTaGCCTCAACTAACATACTTT +
Preference number: 3 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCTLLRT*PQLTYF
Trigger: AAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTGCGGCCCTTCCTCTCTaGGCCGGGCAGTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPAALPL*AGQWRA
Trigger: AGCCCTCCACTGCCCGGCGCAGAGAGGAAGGGCCGC...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCTCTGCGGCGGTGGCTaGGCTCTCCGTGCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLLCGGG*ALRAAG
Trigger: TCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGAG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTGCGGCCCTTCCTCTCTaGGCCGGGCAGTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLAALPL*AGQWRA
Trigger: AGCCCTCCACTGCCCGGCGCAGAGAGGAAGGGCCGC...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTGGCTGGGCTCTCCGTaGGGCCGGACGGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPWLGSP*GRTAAQ
Trigger: CTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCTCTGCGCCGGGCAGTaGAGGGCTGGGTGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLLCAGQ*RAGCLY
Trigger: GTAAAGGCACCCAGCCCTCCACTGCCCGGCGCAGAG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCTCTGCGGCGGTGGCTaGGCTCTCCGTGCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPLCGGG*ALRAAG
Trigger: TCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGAG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCATCATAGCCTCTGCGGCGGTGGCTaGGCTCTCCGTGCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: IFKHTLIVFSLAFWFHHSLCGGG*ALRAAG
Trigger: TCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGAG...GCTATGATGAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR GCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCAGTGGAGGGCTGGGTaGCTTTACGGGGCATGGTCG +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLQWRAG*LYGAWS
Trigger: CGACCATGCCCCGTAAAGGCACCCAGCCCTCCACTG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCAGGCTCCGCGTCGCTaGTGGCGCCGTCAGGGGACG +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLQAPRR*WRRQGT
Trigger: CGTCCCCTGACGGCGCCAGCAGCGACGCGGAGCCTG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCCAGGCTCCGCGTCGCTaGTGGCGCCGTCAGGGGACG +
Preference number: 4 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFQAPRR*WRRQGT
Trigger: CGTCCCCTGACGGCGCCAGCAGCGACGCGGAGCCTG...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR GCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTTGGCTGGGCTCTCCGTaGGGCCGGACGGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLWLGSP*GRTAAQ
Trigger: CTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCA...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCTGGCTGGGCTCTCCGTaGGGCCGGACGGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFWLGSP*GRTAAQ
Trigger: CTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCA...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR GCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTAGCTTCATTGGTCATTaGTGGAGGCGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPSFIGH*WRRGRR
Trigger: CCTCCTCCCCCGCCTCCAGCAATGACCAATGAAGCT...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTTTCATTGGTCATTGCTaGAGGCGGGGGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPFIGHC*RRGRRN
Trigger: ATTCCTCCTCCCCCGCCTCCAGCAATGACCAATGAA...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTGAGCTCCAGCTTCATTaGTCATTGCTGGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLELQLH*SLLEAG
Trigger: CCCCGCCTCCAGCAATGACCAATGAAGCTGGAGCTC...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACTCTGCGCCGGGCAGTaGAGGGCTGGGTGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGLCAGQ*RAGCLY
Trigger: GTAAAGGCACCCAGCCCTCCACTGCCCGGCGCAGAG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTGCTACTCTTGTGGCTTaGTCCAAGTTGTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPATLVA*SKLSAT
Trigger: AGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGC...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCCCACGAAGGTATGCTaGGCCTTGATAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLPTKVC*ALIAQP
Trigger: AGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACAGTGGAGGGCTGGGTaGCTTTACGGGGCATGGTCG +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGQWRAG*LYGAWS
Trigger: CGACCATGCCCCGTAAAGGCACCCAGCCCTCCACTG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTGGTGATTGTCTCAACTaGCAAGCTAAGTGGAATGCC +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPGDCLN*QAKWNA
Trigger: GGCATTCCACTTAGCTTGCCAGTTGAGACAATCACC...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCTACTAAGGCAGTGGAGGGCTGGGTaGCTTTACGGGGCATGGTCG +
Preference number: 4 (lower is better)
Translates to: YLFDMLLLWLDPSCQLLRQWRAG*LYGAWS
Trigger: CGACCATGCCCCGTAAAGGCACCCAGCCCTCCACTG...CCTTAGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTGAGCTCCAGCTTCATTaGTCATTGCTGGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPELQLH*SLLEAG
Trigger: CCCCGCCTCCAGCAATGACCAATGAAGCTGGAGCTC...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTCTCCTCCCGAAAGGTTaGAGATCTTTTTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPLLPKG*RSFSNF
Trigger: AAAGTTGGAAAAAGATCTTCAACCTTTCGGGAGGAG...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCATCAATCTCATCCATaGAGTAAAGGGGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLHQSHP*SKGEWA
Trigger: AGCCCACTCCCCTTTACTTCATGGATGAGATTGATG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTATCAAGTTCCTCACTTaGAGTCTCTGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPIKFLT*SLCGGG
Trigger: GCCACCGCCGCAGAGACTGCAAGTGAGGAACTTGAT...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp TTTAATATTTCAACTCTCCGACACAAGACTTTAATAGGTTCATTTAGCCGTCCACTCTGCGCCGGGCAGTaGAGGGCTGGGTGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: FNISTLRHKTLIGSFSRPLCAGQ*RAGCLY
Trigger: GTAAAGGCACCCAGCCCTCCACTGCCCGGCGCAGAG...TGGACGGCTAAATGAACCTATTAAAGTCTTGTGTCGGAGAGTTGAAATATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTCAGGAAAAGCGCTTATaGAAAGGTCCCAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPQEKRL*KGPRIF
Trigger: GAAAATTCTGGGACCTTTCCATAAGCGCTTTTCCTG...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTGATGGCACCGAGGTTTaGTTTCATTTCATGACACCG +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLDGTEV*FHFMTP
Trigger: CGGTGTCATGAAATGAAACCAAACCTCGGTGCCATC...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTTGCCTTTACGGGGCATaGTCGCTGCAGGACAGTCCA +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLCLYGA*SLQDSP
Trigger: TGGACTGTCCTGCAGCGACCATGCCCCGTAAAGGCA...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357388.8
CDS-3UTR TCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTGGCTACATCCATCTTTaGACGTGCTTCATTTACCGA +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLGYIHL*TCFIYR
Trigger: TCGGTAAATGAAGCACGTTCAAAGATGGATGTAGCC...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTGTCGTTTTGCAACTGTaGTTCCATTTTGTTTACCTC +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPVVLQL*FHFVYL
Trigger: GAGGTAAACAAAATGGAATCACAGTTGCAAAACGAC...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTTCATCGTGTTCAGTCTaGCCTTTTGGTTTCATCATA +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPSSCSV*PFGFII
Trigger: TATGATGAAACCAAAAGGCCAGACTGAACACGATGA...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTCAGTATTATGACGACTaGGATAGATATCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPQYYDD*DRYQVL
Trigger: CAGAACTTGATATCTATCTCAGTCGTCATAATACTG...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTGCATGACAACAGGATaGTATAGCCACGTCGTATTT +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLCMTTG*YSHVVF
Trigger: AAATACGACGTGGCTATATCATCCTGTTGTCATGCA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTCATCTTCTATCTTTTTaGTATGCTACTCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPHLLSF*YATLVA
Trigger: AGCCACAAGAGTAGCATATCAAAAAGATAGAAGATG...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTACCAGTCATTGTACCTaGCTGTTCTATGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLTSHCT*LFYDLS
Trigger: GGACAAATCATAGAACAGTCAGGTACAATGACTGGT...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTGATTTCAATAACAAGTaGGGAACCCATTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPDFNNK*GTHSSF
Trigger: AAAGGAAGAATGGGTTCCTCACTTGTTATTGAAATC...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTTGGGCCTTGAGTTTATaGTTATTGATTTCTACGATG +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPWALSL*LLISTM
Trigger: CATCGTAGAAATCAATAATCATAAACTCAAGGCCCA...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCCCACGAAGGTATGCTaGGCCTTGATAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLPTKVC*ALIAQP
Trigger: AGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTAGCTTCATTGGTCATTaGTGGAGGCGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCSFIGH*WRRGRR
Trigger: CCTCCTCCCCCGCCTCCAGCAATGACCAATGAAGCT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTATTCTTTACGACCTCTaGTGCTTTGTCCTCAAGACT +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLILYDL*CFVLKT
Trigger: AGTCTTGAGGACAAAGCAGCAGAGGTCGTAAAGAAT...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTAATTCTGCTACCCGTTaGAAATACAATTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPNSATR*KYNSSF
Trigger: GAAGGAAGAATTGTATTTGCAACGGGTAGCAGAATT...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCAAAAACCAAGTGGTTaGCAACTTATGTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLQKPSG*QLMSLS
Trigger: GCTAAGGGACATAAGTTGGCAACCACTTGGTTTTTG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTTTCATTGGTCATTGCTaGAGGCGGGGGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLFIGHC*RRGRRN
Trigger: ATTCCTCCTCCCCCGCCTCCAGCAATGACCAATGAA...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCAGGAAAAGCGCTTATaGAAAGGTCCCAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLQEKRL*KGPRIF
Trigger: GAAAATTCTGGGACCTTTCCATAAGCGCTTTTCCTG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCTCTGCAGGCCGTTCTaGATACATAGAAATTACTGT +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLLCRPF*IHRNYC
Trigger: ACAGTAATTTCTATGTATCCAGAACGGCCTGCAGAG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTGTCTTGATTGCTACTTaGGCTTTAGTAATAGCAGAA +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPVLIAT*ALVIAE
Trigger: TTCTGCTATTACTAAAGCCCAAGTAGCAATCAAGAC...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTTGCGATGTTCTTTCTaGATCTCTGGTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLLRCSF*ISGKDS
Trigger: GGAATCCTTACCAGAGATCCAGAAAGAACATCGCAA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTTTTATACTCTGCGATaGCACCGAGGTTTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLFYTLR*HRGLVS
Trigger: TGAAACCAAACCTCGGTGCCATCGCAGAGTATAAAA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp CCATCTTCTATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCCACTCAGACCAAGGCTaGAGACGGTTGTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: PSSIFLICYSCGLIQVVSHSDQG*RRLCST
Trigger: GGTACTACACAACCGTCTCCAGCCTTGGTCTGAGTG...GCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATAGAAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTGCTACTCTTGTGGCTTaGTCCAAGTTGTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPATLVA*SKLSAT
Trigger: AGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGC...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTGAGTCTTGTGCCTTTTaGAGGTTTCTGTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPESCAF*RFLSAV
Trigger: GACTGCTGACAGAAACCTTCAAAAGGCACAAGACTC...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TTTACCTCTTCTTCAGAGATTTCAATAACAAGTGAGGAACCCATTCTTCCTTTCTGTTCAACTTCACCTTaGAGTCTCTGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: FTSSSEISITSEEPILPFCSTSP*SLCGGG
Trigger: GCCACCGCCGCAGAGACTGCAAGGTGAAGTTGAACA...GAAAGGAAGAATGGGTTCCTCACTTGTTATTGAAATCTCTGAAGAAGAGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CCA 90 bp CAATGGCTCCTAAGTCCCCCAATCTTCCATATATTCCTGGAATCCTGCCAGATTGATATGCTACTCTTGTaGCTTGATCCAAGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: QWLLSPPIFHIFLESCQIDMLLL*LDPSCQ
Trigger: CTGACAACTTGGATCAAGCCACAAGAGTAGCATATC...AATCTGGCAGGATTCCAGGAATATATGGAAGATTGGGGGACTTAGGAGCCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGCACTCAGACCAAGGCTaGAGACGGTTGTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWHSDQG*RRLCST
Trigger: GGTACTACACAACCGTCTCCAGCCTTGGTCTGAGTG...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357388.8
CDS-3UTR CCA 90 bp TTTAATATTTCAACTCTCCGACACAAGACTTTAATAGGTTCATTTAGCCGTCCATGCCTTTACGGGGCATaGTCGCTGCAGGACAGTCCA +
Preference number: 4 (lower is better)
Translates to: FNISTLRHKTLIGSFSRPCLYGA*SLQDSP
Trigger: TGGACTGTCCTGCAGCGACCATGCCCCGTAAAGGCA...TGGACGGCTAAATGAACCTATTAAAGTCTTGTGTCGGAGAGTTGAAATATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
3UTR CAA 72 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTaGCTTAGGACTTTGCCTCAACTAACATACTTTTTA +
Preference number: 4 (lower is better)
Translates to: AHEGMLSLDSTT*LRTLPQLTYFL
Trigger: TAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCGCTACTCTTGTGGCTTaGTCCAAGTTGTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFATLVA*SKLSAT
Trigger: AGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGC...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTGAGTCTTGTGCCTTTTaGAGGTTTCTGTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLESCAF*RFLSAV
Trigger: GACTGCTGACAGAAACCTTCAAAAGGCACAAGACTC...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAGCGGGGGAGGAGGAATaGTGTTCAAAATCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGAGEEE*CSKSLL
Trigger: TAGAAGAGATTTTGAACAGCATTCCTCCTCCCCCGC...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCTTCTTTTTATACTCTaGGATGGCACCGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPLLFIL*DGTEVW
Trigger: CCAAACCTCGGTGCCATCGCAGAGTATAAAAAGAAG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTATATCAAGTTCTGACTaGGCTACATCCATCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLISSSD*ATSIFE
Trigger: TTCAAAGATGGATGTAGCCCAGTCAGAACTTGATAT...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTTTTTCTTGAATTATTaGATCAAGGACTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLFFLNY*IKDFPP
Trigger: AGGGGGAAAGTCCTTGATGCAATAATTCAAGAAAAA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACTTCTTTTTATACTCTaGGATGGCACCGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGLLFIL*DGTEVW
Trigger: CCAAACCTCGGTGCCATCGCAGAGTATAAAAAGAAG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTTGATAGCACAACCTTaGTTAGGACTTTGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPLIAQP*LGLCLN
Trigger: GTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATCAA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTATCGAAAGACACGAGTaGCAAGAAGGCAGGACTGGT +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCIERHE*QEGRTG
Trigger: ACCAGTCCTGCCTTCTTGCCACTCGTGTCTTTCGAT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344722.5
CDS-3UTR CCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTTTGCCACTGCCATTTaGCCCGATAATACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPFATAI*PDNTGK
Trigger: TTTTCCTGTATTATCGGGCCAAATGGCAGTGGCAAA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCTCTGCAGGCCGTTCTaGATACATAGAAATTACTGT +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPLCRPF*IHRNYC
Trigger: ACAGTAATTTCTATGTATCCAGAACGGCCTGCAGAG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTGCTCTATTAAACGCTaGATGCTTGCAGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLCSIKR*MLAVNF
Trigger: AAAATTTACTGCAAGCATCCAGCGTTTAATAGAGCA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTTTTATACTCTGCGATaGCACCGAGGTTTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPFYTLR*HRGLVS
Trigger: TGAAACCAAACCTCGGTGCCATCGCAGAGTATAAAA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR CAA 72 bp AGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTaGTTGAAACACTGTCCTAATTTACTGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGIFFNLRDSLG*LKHCPNLLALW
Trigger: CCAGAGAGCCAGTAAATTAGGACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTATAGATATCAAGTTCTaGCTGGGCTACATCCATCTT +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPIDIKF*LGYIHL
Trigger: AAGATGGATGTAGCCCAGTCAGAACTTGATATCTAT...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTTTTGGTTTCATTTCATaGCACCGGGCTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLFGFIS*HRASKS
Trigger: ACTTTTGGAAGCCCGGTGTCATGAAATGAAACCAAA...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTCATCAATCTCATCCATaGAGTAAAGGGGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCHQSHP*SKGEWA
Trigger: AGCCCACTCCCCTTTACTTCATGGATGAGATTGATG...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCTTTACGACCTCTGCTaGTTTGTCCTCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLLYDLC*FVLKTF
Trigger: AAAAGTCTTGAGGACAAAGCAGCAGAGGTCGTAAAG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACTTTACGACCTCTGCTaGTTTGTCCTCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGLYDLC*FVLKTF
Trigger: AAAAGTCTTGAGGACAAAGCAGCAGAGGTCGTAAAG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATTCTTTACGACCTCTaGTGCTTTGTCCTCAAGACT +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGILYDL*CFVLKT
Trigger: AGTCTTGAGGACAAAGCAGCAGAGGTCGTAAAGAAT...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACAAAAACCAAGTGGTTaGCAACTTATGTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGQKPSG*QLMSLS
Trigger: GCTAAGGGACATAAGTTGGCAACCACTTGGTTTTTG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACAAGACCTATGTAAGTaGGAAAATCTAGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGQDLCK*ENLDVP
Trigger: AGGCACGTCTAGATTTTCCCACTTACATAGGTCTTG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344722.5
CDS-3UTR CCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTCATCGTGTTCAGTCTaGCCTTTTGGTTTCATCATA +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPSSCSV*PFGFII
Trigger: TATGATGAAACCAAAAGGCCAGACTGAACACGATGA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAGATATGCTACTCTTGTaGCTTGATCCAAGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGDMLLL*LDPSCQ
Trigger: CTGACAACTTGGATCAAGCCACAAGAGTAGCATATC...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTGATGGCACCGAGGTTTaGTTTCATTTCATGACACCG +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCDGTEV*FHFMTP
Trigger: CGGTGTCATGAAATGAAACCAAACCTCGGTGCCATC...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACTATCCAAGATTAGTTaGCAGGCATTTCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGLSKIS*QAFPVL
Trigger: CAACACTGGAAATGCCTGCCAACTAATCTTGGATAG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTGGTGATTGTCTCAACTaGCAAGCTAAGTGGAATGCC +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCGDCLN*QAKWNA
Trigger: GGCATTCCACTTAGCTTGCCAGTTGAGACAATCACC...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCTTCCAAAAACCAAGTaGTTGCCAACTTATGTCCCT +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLLPKTK*LPTYVP
Trigger: AGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACTTCCAAAAACCAAGTaGTTGCCAACTTATGTCCCT +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGLPKTK*LPTYVP
Trigger: AGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACCCCAGCATAGGATTTaGAGTTCTGGTTTACAATAT +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGPQHRI*SSGLQY
Trigger: ATATTGTAAACCAGAACTTCAAATCCTATGCTGGGG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGATCTACTGTACAACTCTaGATGTCCTTGTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGSTVQL*MSLCSS
Trigger: TGATGAACACAAGGACATTCAGAGTTGTACAGTAGA...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTGGCTACATCCATCTTTaGACGTGCTTCATTTACCGA +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCGYIHL*TCFIYR
Trigger: TCGGTAAATGAAGCACGTTCAAAGATGGATGTAGCC...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGACCAGTCATTGTACCTaGCTGTTCTATGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWTSHCT*LFYDLS
Trigger: GGACAAATCATAGAACAGTCAGGTACAATGACTGGT...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTGTCGTTTTGCAACTGTaGTTCCATTTTGTTTACCTC +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLVVLQL*FHFVYL
Trigger: GAGGTAAACAAAATGGAATCACAGTTGCAAAACGAC...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCGTCGTTTTGCAACTGTaGTTCCATTTTGTTTACCTC +
Preference number: 4 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFVVLQL*FHFVYL
Trigger: GAGGTAAACAAAATGGAATCACAGTTGCAAAACGAC...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTGGGCCTTGAGTTTATaGTTATTGATTTCTACGATG +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPWALSL*LLISTM
Trigger: CATCGTAGAAATCAATAATCATAAACTCAAGGCCCA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACAGAAACCAGTTTCATaGTCTAGTTTAGGGAGTATG +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGQKPVS*SSLGSM
Trigger: CATACTCCCTAAACTAGATCATGAAACTGGTTTCTG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCTTACTTCATACTCATaGAGCAACTATAGTGGGATA +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPLTSYS*SNYSGI
Trigger: TATCCCACTATAGTTGCTTCATGAGTATGAAGTAAG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGCAGAAGTATTATCTCTaGAGGCCGTTCTGGATACAT +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWQKYYL*RPFWIH
Trigger: ATGTATCCAGAACGGCCTGCAGAGATAATACTTCTG...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGATTCCTTTCATTACTTTaGTTCCACCACCAGTCATTG +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGFLSLL*FHHQSL
Trigger: CAATGACTGGTGGTGGAAGCAAAGTAATGAAAGGAA...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCTTCCTTTCATTACTTTaGTTCCACCACCAGTCATTG +
Preference number: 4 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFFLSLL*FHHQSL
Trigger: CAATGACTGGTGGTGGAAGCAAAGTAATGAAAGGAA...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR GCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTGTCAGCAGTCTTGATTaGTACTTGGGCTTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLVSSLD*YLGFSN
Trigger: ATTACTAAAGCCCAAGTAGCAATCAAGACTGCTGAC...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGTTGATAGCACAACCTTaGTTAGGACTTTGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWLIAQP*LGLCLN
Trigger: GTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATCAA...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGTTTGCCACTGCCATTTaGCCCGATAATACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWFATAI*PDNTGK
Trigger: TTTTCCTGTATTATCGGGCCAAATGGCAGTGGCAAA...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTTCCAAGTCAATTCCATaGCTTCGAAGAAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLSKSIP*LRRRFP
Trigger: TGGAAATCTTCTTCGAAGCCATGGAATTGACTTGGA...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCATCATAGCATATCAAGTTCTGACTaGGCTACATCCATCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IFKHTLIVFSLAFWFHHSISSSD*ATSIFE
Trigger: TTCAAAGATGGATGTAGCCCAGTCAGAACTTGATAT...GCTATGATGAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACCAACTTTTCTTAGGTaGTCGAACACTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGPTFLR*SNTEHD
Trigger: ATCATGTTCAGTGTTCGACCACCTAAGAAAAGTTGG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTAACTGGCAAGCTAAGTaGAATGCCTTAAAGAATCTA +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPNWQAK*NALKNL
Trigger: TAGATTCTTTAAGGCATTCCACTTAGCTTGCCAGTT...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR CAA 72 bp ATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTaGCCTCAACTAACATACTTTTTAGTTTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: MLSLDSTTLLRT*PQLTYFLVWQV
Trigger: AACTTGCCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR CAA 72 bp GCTACATCCATCTTTGAACGTGCTTCATTTACCGATTaGCTGAAACCCATAAGTTCTTTCTCTCGACTTTCT +
Preference number: 4 (lower is better)
Translates to: ATSIFERASFTD*LKPISSFSRLS
Trigger: AGAAAGTCGAGAGAAAGAACTTATGGGTTTCAGCAAATCGGTAAATGAAGCACGTTCAAAGATGGATGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGCCCCAGCATAGGATTTaGAGTTCTGGTTTACAATAT +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWPQHRI*SSGLQY
Trigger: ATATTGTAAACCAGAACTTCAAATCCTATGCTGGGG...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TATCAAGTTCTGACTGGGCTACATCCATCTTTGAACGTGCTTCATTTACCGATTCAGTATTATGACGACTaGGATAGATATCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: YQVLTGLHPSLNVLHLPIQYYDD*DRYQVL
Trigger: CAGAACTTGATATCTATCTCAGTCGTCATAATACTG...AATCGGTAAATGAAGCACGTTCAAAGATGGATGTAGCCCAGTCAGAACTTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp CCTGACTGTTCTATGATTTGTCCCTGTAAAGTTACCACTCTCCATCTTCTATCTCATCTTCTATCTTTTTaGTATGCTACTCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PDCSMICPCKVTTLHLLSHLLSF*YATLVA
Trigger: AGCCACAAGAGTAGCATATCAAAAAGATAGAAGATG...AGATAGAAGATGGAGAGTGGTAACTTTACAGGGACAAATCATAGAACAGTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGATACCTGACTGTTCTATaGTTTGTCCCTGTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGYLTVL*FVPVKL
Trigger: TAACTTTACAGGGACAAATCATAGAACAGTCAGGTA...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp CTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCATACCTGACTGTTCTATaGTTTGTCCCTGTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LLNIQAYPHRVQSGLLVSYLTVL*FVPVKL
Trigger: TAACTTTACAGGGACAAATCATAGAACAGTCAGGTA...TGAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCGATTTCAATAACAAGTaGGGAACCCATTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFDFNNK*GTHSSF
Trigger: AAAGGAAGAATGGGTTCCTCACTTGTTATTGAAATC...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTTTTGGTTTCATTTCATaGCACCGGGCTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCFGFIS*HRASKS
Trigger: ACTTTTGGAAGCCCGGTGTCATGAAATGAAACCAAA...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACTTACTTCATACTCATaGAGCAACTATAGTGGGATA +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGLTSYS*SNYSGI
Trigger: TATCCCACTATAGTTGCTTCATGAGTATGAAGTAAG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTCAGAAGTATTATCTCTaGAGGCCGTTCTGGATACAT +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCQKYYL*RPFWIH
Trigger: ATGTATCCAGAACGGCCTGCAGAGATAATACTTCTG...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTCTATCTTTTTGATATaGTACTCTTGTGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPSIFLI*YSCGLI
Trigger: GATCAAGCCACAAGAGTAGCATATCAAAAAGATAGA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGGTCAGCAGTCTTGATTaGTACTTGGGCTTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWVSSLD*YLGFSN
Trigger: ATTACTAAAGCCCAAGTAGCAATCAAGACTGCTGAC...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTATTCTTGAAGCAGATTaGGATGTTCTTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLILEAD*DVLSGS
Trigger: AGATCCAGAAAGAACATCGCAATCTGCTTCAAGAAT...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGCCGAAGATCTTCATATaGCTGTCTAAAACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWPKIFI*LSKTVS
Trigger: AGAGACAGTTTTAGACAGGCATATGAAGATCTTCGG...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGTCCAAGTCAATTCCATaGCTTCGAAGAAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWSKSIP*LRRRFP
Trigger: TGGAAATCTTCTTCGAAGCCATGGAATTGACTTGGA...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp TATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCTACTAAGGTCATCGTGTTCAGTCTaGCCTTTTGGTTTCATCATA +
Preference number: 4 (lower is better)
Translates to: YLFDMLLLWLDPSCQLLRSSCSV*PFGFII
Trigger: TATGATGAAACCAAAAGGCCAGACTGAACACGATGA...CCTTAGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAGTCTTGATTGCTACTTaGGCTTTAGTAATAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGVLIAT*ALVIAE
Trigger: TTCTGCTATTACTAAAGCCCAAGTAGCAATCAAGAC...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTTTGCGATGTTCTTTCTaGATCTCTGGTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCLRCSF*ISGKDS
Trigger: GGAATCCTTACCAGAGATCCAGAAAGAACATCGCAA...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGCCAACTTTTCTTAGGTaGTCGAACACTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWPTFLR*SNTEHD
Trigger: ATCATGTTCAGTGTTCGACCACCTAAGAAAAGTTGG...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
3UTR CAA 72 bp CTTTCCCCCTACTTCGATTCATTGCTAATGAGCTCTTaGCTTCTTCAACTTTTTGAAAGAGATCATGAACCA +
Preference number: 4 (lower is better)
Translates to: LSPYFDSLLMSS*LLQLFERDHEP
Trigger: TGGTTCATGATCTCTTTCAAAAAGTTGAAGAAGCAAAGAGCTCATTAGCAATGAATCGAAGTAGGGGGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTATAGATATCAAGTTCTaGCTGGGCTACATCCATCTT +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCIDIKF*LGYIHL
Trigger: AAGATGGATGTAGCCCAGTCAGAACTTGATATCTAT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGCAGTATTATGACGACTaGGATAGATATCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWQYYDD*DRYQVL
Trigger: CAGAACTTGATATCTATCTCAGTCGTCATAATACTG...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TTTAATATTTCAACTCTCCGACACAAGACTTTAATAGGTTCATTTAGCCGTCCATGCATGACAACAGGATaGTATAGCCACGTCGTATTT +
Preference number: 4 (lower is better)
Translates to: FNISTLRHKTLIGSFSRPCMTTG*YSHVVF
Trigger: AAATACGACGTGGCTATATCATCCTGTTGTCATGCA...TGGACGGCTAAATGAACCTATTAAAGTCTTGTGTCGGAGAGTTGAAATATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGCATCTTCTATCTTTTTaGTATGCTACTCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWHLLSF*YATLVA
Trigger: AGCCACAAGAGTAGCATATCAAAAAGATAGAAGATG...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TTTAATATTTCAACTCTCCGACACAAGACTTTAATAGGTTCATTTAGCCGTCCAACCAGTCATTGTACCTaGCTGTTCTATGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: FNISTLRHKTLIGSFSRPTSHCT*LFYDLS
Trigger: GGACAAATCATAGAACAGTCAGGTACAATGACTGGT...TGGACGGCTAAATGAACCTATTAAAGTCTTGTGTCGGAGAGTTGAAATATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR GCA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGATTTTTCTTGAATTATTaGATCAAGGACTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGFFLNY*IKDFPP
Trigger: AGGGGGAAAGTCCTTGATGCAATAATTCAAGAAAAA...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTTCTATCTTTTTGATATaGTACTCTTGTGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLSIFLI*YSCGLI
Trigger: GATCAAGCCACAAGAGTAGCATATCAAAAAGATAGA...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTTTCCTTTCATTACTTTaGTTCCACCACCAGTCATTG +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCFLSLL*FHHQSL
Trigger: CAATGACTGGTGGTGGAAGCAAAGTAATGAAAGGAA...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGAATTCTGCTACCCGTTaGAAATACAATTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWNSATR*KYNSSF
Trigger: GAAGGAAGAATTGTATTTGCAACGGGTAGCAGAATT...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTCCGAAGATCTTCATATaGCTGTCTAAAACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCPKIFI*LSKTVS
Trigger: AGAGACAGTTTTAGACAGGCATATGAAGATCTTCGG...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGATATCAAGTTCTGACTaGGCTACATCCATCTTTGAA +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWISSSD*ATSIFE
Trigger: TTCAAAGATGGATGTAGCCCAGTCAGAACTTGATAT...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGAACTGGCAAGCTAAGTaGAATGCCTTAAAGAATCTA +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWNWQAK*NALKNL
Trigger: TAGATTCTTTAAGGCATTCCACTTAGCTTGCCAGTT...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TTTAATATTTCAACTCTCCGACACAAGACTTTAATAGGTTCATTTAGCCGTCCAATAGATATCAAGTTCTaGCTGGGCTACATCCATCTT +
Preference number: 4 (lower is better)
Translates to: FNISTLRHKTLIGSFSRPIDIKF*LGYIHL
Trigger: AAGATGGATGTAGCCCAGTCAGAACTTGATATCTAT...TGGACGGCTAAATGAACCTATTAAAGTCTTGTGTCGGAGAGTTGAAATATTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR TCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTTACCTGACTGTTCTATaGTTTGTCCCTGTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCYLTVL*FVPVKL
Trigger: TAACTTTACAGGGACAAATCATAGAACAGTCAGGTA...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR TCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTGATTTCAATAACAAGTaGGGAACCCATTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCDFNNK*GTHSSF
Trigger: AAAGGAAGAATGGGTTCCTCACTTGTTATTGAAATC...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TTTGAACGTGCTTCATTTACCGATTTGCTGAAACCCATAAGTTCTTTCTCTCGATTTTTCTTGAATTATTaGATCAAGGACTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FERASFTDLLKPISSFSRFFLNY*IKDFPP
Trigger: AGGGGGAAAGTCCTTGATGCAATAATTCAAGAAAAA...TCGAGAGAAAGAACTTATGGGTTTCAGCAAATCGGTAAATGAAGCACGTTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR GCA 90 bp TTTGAACGTGCTTCATTTACCGATTTGCTGAAACCCATAAGTTCTTTCTCTCGATCTATCTTTTTGATATaGTACTCTTGTGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: FERASFTDLLKPISSFSRSIFLI*YSCGLI
Trigger: GATCAAGCCACAAGAGTAGCATATCAAAAAGATAGA...TCGAGAGAAAGAACTTATGGGTTTCAGCAAATCGGTAAATGAAGCACGTTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR GCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGATTTCTCGTTCACTATaGCGTAACTTAACTACTCTT +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWISRSL*RNLTTL
Trigger: AAGAGTAGTTAAGTTACGGCATAGTGAACGAGAAAT...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR GCA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTATTCTTGAAGCAGATTaGGATGTTCTTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCILEAD*DVLSGS
Trigger: AGATCCAGAAAGAACATCGCAATCTGCTTCAAGAAT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CCA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGTGCTCTATTAAACGCTaGATGCTTGCAGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWCSIKR*MLAVNF
Trigger: AAAATTTACTGCAAGCATCCAGCGTTTAATAGAGCA...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS CCA 90 bp GGCTCTCCGTGCGGCCGGACGGCGGCTCAGGCTCCGCGTCGCTGCTaGCGCCGTCAGGGGACGGCGGCGGCGGCCCTTCCTCTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: GSPCGRTAAQAPRRC*RRQGTAAAALPLCA
Trigger: GGCGCAGAGAGGAAGGGCCGCCGCCGCCGTCCCCTGACGGCGCCAGCAGCGACGCGGAGCCTGAGCCGCCGTCCGGCCGCACGGAGAGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462787.5
ENST00000465903.5
ENST00000468653.5
ENST00000469762.5
ENST00000469858.5
ENST00000485645.5
ENST00000489573.5
ENST00000490207.5
ENST00000497311.5
CDS GCA 90 bp CTGGGCTCTCCGTGCGGCCGGACGGCGGCTCAGGCTCCGCGTCGCTaGTGGCGCCGTCAGGGGACGGCGGCGGCGGCCCTTCCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGSPCGRTAAQAPRR*WRRQGTAAAALPLC
Trigger: GCAGAGAGGAAGGGCCGCCGCCGCCGTCCCCTGACGGCGCCAGCAGCGACGCGGAGCCTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462787.5
ENST00000465903.5
ENST00000468653.5
ENST00000469762.5
ENST00000469858.5
ENST00000485645.5
ENST00000489573.5
ENST00000490207.5
ENST00000497311.5
CDS CCA 90 bp GACGGCGGCGGCGGCCCTTCCTCTCTGCGCCGGGCAGTGGAGGGCTaGGTGCCTTTACGGGGCATGGTCGCTCCCCGCTCCTACCGGTGT +
Preference number: 5 (lower is better)
Translates to: DGGGGPSSLRRAVEG*VPLRGMVAPRSYRC
Trigger: ACACCGGTAGGAGCGGGGAGCGACCATGCCCCGTAAAGGCACCCAGCCCTCCACTGCCCGGCGCAGAGAGGAAGGGCCGCCGCCGCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485645.5
CDS GCA 90 bp CAAGTTCCTCACTTGCAGTCTCTGCGGCGGTGGCTGGGCTCTCCGTaGGGCCGGACGGCGGCTCAGGCTCCGCGTCGCTGCTGGCGCCGT +
Preference number: 5 (lower is better)
Translates to: QVPHLQSLRRWLGSP*GRTAAQAPRRCWRR
Trigger: ACGGCGCCAGCAGCGACGCGGAGCCTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGAGACTGCAAGTGAGGAACTTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462787.5
ENST00000465903.5
ENST00000468653.5
ENST00000485645.5
ENST00000489573.5
ENST00000490207.5
ENST00000497311.5
CDS CCA 90 bp CGTCAGGGGACGGCGGCGGCGGCCCTTCCTCTCTGCGCCGGGCAGTaGAGGGCTGGGTGCCTTTACGGGGCATGGTCGCTGCAGGACAGT +
Preference number: 5 (lower is better)
Translates to: RQGTAAAALPLCAGQ*RAGCLYGAWSLQDS
Trigger: ACTGTCCTGCAGCGACCATGCCCCGTAAAGGCACCCAGCCCTCCACTGCCCGGCGCAGAGAGGAAGGGCCGCCGCCGCCGTCCCCTGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357388.8
ENST00000468653.5
ENST00000469762.5
ENST00000469858.5
ENST00000497311.5
CDS GCA 90 bp TTCAACTTCACCTTGCAGTCTCTGCGGCGGTGGCTGGGCTCTCCGTaGGGCCGGACGGCGGCTCAGGCTCCGCGTCGCTGCTGGCGCCGT +
Preference number: 5 (lower is better)
Translates to: FNFTLQSLRRWLGSP*GRTAAQAPRRCWRR
Trigger: ACGGCGCCAGCAGCGACGCGGAGCCTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGAGACTGCAAGGTGAAGTTGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS CCA 90 bp GACGGCGGCGGCGGCCCTTCCTCTCTGCGCCGGGCAGTGGAGGGCTaGGTGCCTTTACGGGGCATGGTCGCTGCAGGACAGTCCACTCAG +
Preference number: 5 (lower is better)
Translates to: DGGGGPSSLRRAVEG*VPLRGMVAAGQSTQ
Trigger: CTGAGTGGACTGTCCTGCAGCGACCATGCCCCGTAAAGGCACCCAGCCCTCCACTGCCCGGCGCAGAGAGGAAGGGCCGCCGCCGCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357388.8
ENST00000468653.5
ENST00000469762.5
ENST00000469858.5
ENST00000497311.5
CDS CCA 90 bp ATAGCAATTTGTTCAACTTCACCTTGCAGTCTCTGCGGCGGTGGCTaGGCTCTCCGTGCGGCCGGACGGCGGCTCAGGCTCCGCGTCGCT +
Preference number: 5 (lower is better)
Translates to: IAICSTSPCSLCGGG*ALRAAGRRLRLRVA
Trigger: AGCGACGCGGAGCCTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGAGACTGCAAGGTGAAGTTGAACAAATTGCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS GCA 90 bp ATACGCCAGCATTTCCGGACATTCCCACGCTTTCGGGGCCAGGGATaGAAGCGCGCACCGACGTGGAGAAACGAGTTCGTGTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: IRQHFRTFPRFRGQG*KRAPTWRNEFVSGS
Trigger: TGACCCGGACACGAACTCGTTTCTCCACGTCGGTGCGCGCTTGCATCCCTGGCCCCGAAAGCGTGGGAATGTCCGGAAATGCTGGCGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CCA 90 bp CGCACCGACGTGGAGAAACGAGTTCGTGTCCGGGTCAGGATCCCGTaGCTAGCAACTCTCTCCAGAGCGGTGAAGACTAACTGGCGACTC +
Preference number: 5 (lower is better)
Translates to: RTDVEKRVRVRVRIP*LATLSRAVKTNWRL
Trigger: GAGTCGCCAGTTAGTCTTCACCGCTCTGGAGAGAGTTGCTAGCCACGGGATCCTGACCCGGACACGAACTCGTTTCTCCACGTCGGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CCA 90 bp GAGTGGCAAGAGTTTGTCTCTCCAGCTCCCCAGGCGGAGTCCCGTTaGACAGTAAACCATGAAAGGTCACCAGCGAAGGCTGAGACCCGG +
Preference number: 5 (lower is better)
Translates to: EWQEFVSPAPQAESR*TVNHERSPAKAETR
Trigger: CCGGGTCTCAGCCTTCGCTGGTGACCTTTCATGGTTTACTGTCCAACGGGACTCCGCCTGGGGAGCTGGAGAGACAAACTCTTGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS-3UTR CAA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTTGCTACTCTTGTGGCTaGATCCAAGTTGTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPCYSCG*IQVVSY
Trigger: GTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCA...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCAGGCATTTCCAGTGTaGGTAAATCAAAGGCCCACG +
Preference number: 5 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLQAFPV*VNQRPT
Trigger: CGTGGGCCTTTGATTTACCAACACTGGAAATGCCTG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTATCAAGTTCCTCACTaGCAGTCTCTGCGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPYQVPH*QSLRRW
Trigger: CCACCGCCGCAGAGACTGCAAGTGAGGAACTTGATA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTCAATAACATTGGATTaGCCACTGCCATTTGGCCCG +
Preference number: 5 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLSITLD*PLPFGP
Trigger: CGGGCCAAATGGCAGTGGCAAATCCAATGTTATTGA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTCTTCCTTTCATTACTTaGCTTCCACCACCAGTCATT +
Preference number: 5 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPLPFIT*LPPPVI
Trigger: AATGACTGGTGGTGGAAGCAAAGTAATGAAAGGAAG...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCTACTAAGGCAAGGCTGGAGACGGTaGTGTAGTACCCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: YLFDMLLLWLDPSCQLLRQGWRR*CSTHLP
Trigger: GGGGAGGTGGGTACTACACAACCGTCTCCAGCCTTG...CCTTAGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp GCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTAGGACTTTGCCTAGGATCAATCAACGATaGAGCAACTGCTTAGTTTGT +
Preference number: 5 (lower is better)
Translates to: AHEGMLSLDSTTLLRTLPRINQR*SNCLVC
Trigger: ACAAACTAAGCAGTTGCTCAATCGTTGATTGATCCT...AGGCAAAGTCCTAAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344722.5
CDS-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGATATCAAGTTCCTCACTaGCAGTCTCTGCGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGYQVPH*QSLRRW
Trigger: CCACCGCCGCAGAGACTGCAAGTGAGGAACTTGATA...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTCCTTCTCGAGGGCATaGTTTCTGGTTGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLSFSRA*FLVVVS
Trigger: TGAAACAACAACCAGAAACAATGCCCTCGAGAAGGA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTCAAGGCTGGAGACGGTaGTGTAGTACCCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCQGWRR*CSTHLP
Trigger: GGGGAGGTGGGTACTACACAACCGTCTCCAGCCTTG...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357388.8
CDS-3UTR CAA 90 bp TATCAAGTTCTGACTGGGCTACATCCATCTTTGAACGTGCTTCATTTACCGATTTTGTTCAACTTCACCTaGCAGTCTCTGCGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: YQVLTGLHPSLNVLHLPILFNFT*QSLRRW
Trigger: CCACCGCCGCAGAGACTGCAAGGTGAAGTTGAACAA...AATCGGTAAATGAAGCACGTTCAAAGATGGATGTAGCCCAGTCAGAACTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCCCTACTTCGATTCATaGCTAATGAGCTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLPYFDS*LMSSLL
Trigger: AAGCAAAGAGCTCATTAGCAATGAATCGAAGTAGGG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTTTCTGTCAGCAGTCTaGATTGCTACTTGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLFLSAV*IATWAL
Trigger: TAAAGCCCAAGTAGCAATCAAGACTGCTGACAGAAA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCGATGGCACCGAGGTTaGGTTTCATTTCATGACACC +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPRWHRG*VSFHDT
Trigger: GGTGTCATGAAATGAAACCAAACCTCGGTGCCATCG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTTTGATATGCTACTCTaGTGGCTTGATCCAAGTTGT +
Preference number: 5 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLFDMLL*WLDPSC
Trigger: ACAACTTGGATCAAGCCACAAGAGTAGCATATCAAA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCGATGGCACCGAGGTTaGGTTTCATTTCATGACACC +
Preference number: 5 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLRWHRG*VSFHDT
Trigger: GGTGTCATGAAATGAAACCAAACCTCGGTGCCATCG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTCAATTCTGCTACCCGTaGCAAATACAATTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLQFCYP*QIQFFL
Trigger: AAGGAAGAATTGTATTTGCAACGGGTAGCAGAATTG...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCAGGCATTTCCAGTGTaGGTAAATCAAAGGCCCACG +
Preference number: 5 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLQAFPV*VNQRPT
Trigger: CGTGGGCCTTTGATTTACCAACACTGGAAATGCCTG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS GCA 90 bp CAGTATCATCCCATCTCCTCTTCAATACAAAGCAACTCATACCTCTaGAGCATTTGTATTCTTTACGACCTCTGCTGCTTTGTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: QYHPISSSIQSNSYL*SICILYDLCCFVLK
Trigger: CTTGAGGACAAAGCAGCAGAGGTCGTAAAGAATACAAATGCTGCAGAGGTATGAGTTGCTTTGTATTGAAGAGGAGATGGGATGATACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488017.1
CDS-3UTR CAA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTTCAATAACATTGGATTaGCCACTGCCATTTGGCCCG +
Preference number: 5 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLSITLD*PLPFGP
Trigger: CGGGCCAAATGGCAGTGGCAAATCCAATGTTATTGA...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCATCATAGCTCCTTCTCGAGGGCATaGTTTCTGGTTGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: IFKHTLIVFSLAFWFHHSSFSRA*FLVVVS
Trigger: TGAAACAACAACCAGAAACAATGCCCTCGAGAAGGA...GCTATGATGAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTGGGCTACATCCATCTTaGAACGTGCTTCATTTACCG +
Preference number: 5 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLGLHPS*NVLHLP
Trigger: CGGTAAATGAAGCACGTTCAAAGATGGATGTAGCCC...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCGGGCTACATCCATCTTaGAACGTGCTTCATTTACCG +
Preference number: 5 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFGLHPS*NVLHLP
Trigger: CGGTAAATGAAGCACGTTCAAAGATGGATGTAGCCC...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp CCATCTTCTATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCGCAGCTTTCCTTTCTTaGAGAGTCTCAGAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PSSIFLICYSCGLIQVVSAAFLS*RVSEAA
Trigger: TGCAGCTTCTGAGACTCTCAAAGAAAGGAAAGCTGC...GCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATAGAAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp TATCAAGTTCTGACTGGGCTACATCCATCTTTGAACGTGCTTCATTTACCGATTTGCTACTCTTGTGGCTaGATCCAAGTTGTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: YQVLTGLHPSLNVLHLPICYSCG*IQVVSY
Trigger: GTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCA...AATCGGTAAATGAAGCACGTTCAAAGATGGATGTAGCCCAGTCAGAACTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp GGTAAATCAAAGGCCCACGAAGGTATGCTGAGCCTTGATAGCACAACCTTGCTTTTTATCAAGTTTGTCTaGTTGGGCCTTGAGTTTATG +
Preference number: 5 (lower is better)
Translates to: GKSKAHEGMLSLDSTTLLFIKFV*LGLEFM
Trigger: CATAAACTCAAGGCCCAACAAGACAAACTTGATAAA...AAGCAAGGTTGTGCTATCAAGGCTCAGCATACCTTCGTGGGCCTTTGATTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS GCA 90 bp GGCACCGAGGTTTGGTTTCATTTCATGACACCGGGCTTCCAAAAGTaGAATTTGATTTGTTATAGAATCTGGATTCTTGATCGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: GTEVWFHFMTPGFQK*NLICYRIWILDRFK
Trigger: CTTGAAGCGATCAAGAATCCAGATTCTATAACAAATCAAATTGCACTTTTGGAAGCCCGGTGTCATGAAATGAAACCAAACCTCGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
ENST00000486711.1
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTGTTTCTCCAGTTTTTaGGCTTTACTCGTGGCATGT +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPCFSSF*ALLVAC
Trigger: ACATGCCACGAGTAAAGCCAAAAAACTGGAGAAACA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGGCAGCTTTCCTTTCTTaGAGAGTCTCAGAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWAAFLS*RVSEAA
Trigger: TGCAGCTTCTGAGACTCTCAAAGAAAGGAAAGCTGC...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCCCTACTTCGATTCATaGCTAATGAGCTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPPYFDS*LMSSLL
Trigger: AAGCAAAGAGCTCATTAGCAATGAATCGAAGTAGGG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAAGAGTCTTGTGCCTTTaGAAGGTTTCTGTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGRVLCL*KVSVSS
Trigger: ACTGCTGACAGAAACCTTCAAAAGGCACAAGACTCT...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTTCTCCTCCCGAAAGGTaGAAGATCTTTTTCCAACTT +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPSPPER*KIFFQL
Trigger: AAGTTGGAAAAAGATCTTCAACCTTTCGGGAGGAGA...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACGAGATAGCCTAGGCTaGTTGAAACACTGTCCTAAT +
Preference number: 5 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGRDSLG*LKHCPN
Trigger: ATTAGGACAGTGTTTCAACAAGCCTAGGCTATCTCG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGATGTTTCTCCAGTTTTTaGGCTTTACTCGTGGCATGT +
Preference number: 5 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGCFSSF*ALLVAC
Trigger: ACATGCCACGAGTAAAGCCAAAAAACTGGAGAAACA...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp CCATCTTCTATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCTGTTTCTCCAGTTTTTaGGCTTTACTCGTGGCATGT +
Preference number: 5 (lower is better)
Translates to: PSSIFLICYSCGLIQVVSCFSSF*ALLVAC
Trigger: ACATGCCACGAGTAAAGCCAAAAAACTGGAGAAACA...GCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATAGAAGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGTCCTTCTCGAGGGCATaGTTTCTGGTTGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWSFSRA*FLVVVS
Trigger: TGAAACAACAACCAGAAACAATGCCCTCGAGAAGGA...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTGGGCTACATCCATCTTaGAACGTGCTTCATTTACCG +
Preference number: 5 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCGLHPS*NVLHLP
Trigger: CGGTAAATGAAGCACGTTCAAAGATGGATGTAGCCC...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTGCAGCTTTCCTTTCTTaGAGAGTCTCAGAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCAAFLS*RVSEAA
Trigger: TGCAGCTTCTGAGACTCTCAAAGAAAGGAAAGCTGC...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCCATCTTCTATCTTTTaGATATGCTACTCTTGTGGC +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPPSSIF*ICYSCG
Trigger: GCCACAAGAGTAGCATATCAAAAAGATAGAAGATGG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGACTTCCTTTCATTACTTaGCTTCCACCACCAGTCATT +
Preference number: 5 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGLPFIT*LPPPVI
Trigger: AATGACTGGTGGTGGAAGCAAAGTAATGAAAGGAAG...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGAGAGTCTTGTGCCTTTaGAAGGTTTCTGTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWRVLCL*KVSVSS
Trigger: ACTGCTGACAGAAACCTTCAAAAGGCACAAGACTCT...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTCAATTCTGCTACCCGTaGCAAATACAATTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPQFCYP*QIQFFL
Trigger: AAGGAAGAATTGTATTTGCAACGGGTAGCAGAATTG...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTTCTCCTCCCGAAAGGTaGAAGATCTTTTTCCAACTT +
Preference number: 5 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLSPPER*KIFFQL
Trigger: AAGTTGGAAAAAGATCTTCAACCTTTCGGGAGGAGA...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTACCTTGCTTAGGACTTaGCCTCAACTAACATACTTT +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPTLLRT*PQLTYF
Trigger: AAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGT...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAATGCCTGATAGCCTAGGCTTGTaGAAACACTGTCCTAATTTA +
Preference number: 5 (lower is better)
Translates to: IWVITVVIVSTGKLSGMPDSLGL*KHCPNL
Trigger: TAAATTAGGACAGTGTTTCAACAAGCCTAGGCTATC...AGGCATTCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS CCA 90 bp ATACAATTCTTCCTTCTTTTTATACTCTGCGATGGCACCGAGGTTTaGTTTCATTTCATGACACCGGGCTTCCAAAAGTGCAATTTGATT +
Preference number: 5 (lower is better)
Translates to: IQFFLLFILCDGTEV*FHFMTPGFQKCNLI
Trigger: AATCAAATTGCACTTTTGGAAGCCCGGTGTCATGAAATGAAACCAAACCTCGGTGCCATCGCAGAGTATAAAAAGAAGGAAGAATTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
ENST00000486711.1
CDS-3UTR CAA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCGCTTCATTTACCGATTaGCTGAAACCCATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFASFTD*LKPISS
Trigger: AGAACTTATGGGTTTCAGCAAATCGGTAAATGAAGC...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp TATCTTTTTGATATGCTACTCTTGTGGCTTGATCCAAGTTGTCAGCTACTAAGGCCCTACTTCGATTCATaGCTAATGAGCTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: YLFDMLLLWLDPSCQLLRPYFDS*LMSSLL
Trigger: AAGCAAAGAGCTCATTAGCAATGAATCGAAGTAGGG...CCTTAGTAGCTGACAACTTGGATCAAGCCACAAGAGTAGCATATCAAAAAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGATTTGATATGCTACTCTaGTGGCTTGATCCAAGTTGT +
Preference number: 5 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGFDMLL*WLDPSC
Trigger: ACAACTTGGATCAAGCCACAAGAGTAGCATATCAAA...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TCTTCTAAATATTCAAGCATACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCTTTGATATGCTACTCTaGTGGCTTGATCCAAGTTGT +
Preference number: 5 (lower is better)
Translates to: SSKYSSIPSSCSVWPFGFFDMLL*WLDPSC
Trigger: ACAACTTGGATCAAGCCACAAGAGTAGCATATCAAA...GAAACCAAAAGGCCAGACTGAACACGATGAGGGTATGCTTGAATATTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTCCATCTTCTATCTTTTaGATATGCTACTCTTGTGGC +
Preference number: 5 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLPSSIF*ICYSCG
Trigger: GCCACAAGAGTAGCATATCAAAAAGATAGAAGATGG...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TTTGAACGTGCTTCATTTACCGATTTGCTGAAACCCATAAGTTCTTTCTCTCGACTTCCTTTCATTACTTaGCTTCCACCACCAGTCATT +
Preference number: 5 (lower is better)
Translates to: FERASFTDLLKPISSFSRLPFIT*LPPPVI
Trigger: AATGACTGGTGGTGGAAGCAAAGTAATGAAAGGAAG...TCGAGAGAAAGAACTTATGGGTTTCAGCAAATCGGTAAATGAAGCACGTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGTTTCTGTCAGCAGTCTaGATTGCTACTTGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWFLSAV*IATWAL
Trigger: TAAAGCCCAAGTAGCAATCAAGACTGCTGACAGAAA...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAAACATACTTTTTAGTTaGGCAAGTTACCTGACCCTC +
Preference number: 5 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGNILFS*ASYLTL
Trigger: GAGGGTCAGGTAACTTGCCAAACTAAAAAGTATGTT...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp CATAGTATTTGGGTAATAACTGTGGTGATTGTCTCAACTGGCAAGCTAAGTGGAACCTTGCTTAGGACTTaGCCTCAACTAACATACTTT +
Preference number: 5 (lower is better)
Translates to: HSIWVITVVIVSTGKLSGTLLRT*PQLTYF
Trigger: AAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGT...TCCACTTAGCTTGCCAGTTGAGACAATCACCACAGTTATTACCCAAATACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTCGAGATAGCCTAGGCTaGTTGAAACACTGTCCTAAT +
Preference number: 5 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCRDSLG*LKHCPN
Trigger: ATTAGGACAGTGTTTCAACAAGCCTAGGCTATCTCG...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGGCTTCATTTACCGATTaGCTGAAACCCATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWASFTD*LKPISS
Trigger: AGAACTTATGGGTTTCAGCAAATCGGTAAATGAAGC...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp ATACAATACCGAAAGTCCTTCCAAAAACCAAGTGGTTGCCAACTTATGTCCCTTATTTCTACGATGGTATaGTGTAAGCGTTTAACCTCA +
Preference number: 5 (lower is better)
Translates to: IQYRKSFQKPSGCQLMSLISTMV*CKRLTS
Trigger: TGAGGTTAAACGCTTACACAATACCATCGTAGAAAT...AAGGGACATAAGTTGGCAACCACTTGGTTTTTGGAAGGACTTTCGGTATTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TTTACCTCTTCTTCAGAGATTTCAATAACAAGTGAGGAACCCATTCTTCCTTTCCCATCTTCTATCTTTTaGATATGCTACTCTTGTGGC +
Preference number: 5 (lower is better)
Translates to: FTSSSEISITSEEPILPFPSSIF*ICYSCG
Trigger: GCCACAAGAGTAGCATATCAAAAAGATAGAAGATGG...GAAAGGAAGAATGGGTTCCTCACTTGTTATTGAAATCTCTGAAGAAGAGGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS-3UTR CAA 90 bp GATAGCACAACCTTGCTTAGGACTTTGCCTCAACTAACATACTTTTTAGTTTGGTTTATCAAGTTTGTCTaGTTGGGCCTTGAGTTTATG +
Preference number: 5 (lower is better)
Translates to: DSTTLLRTLPQLTYFLVWFIKFV*LGLEFM
Trigger: CATAAACTCAAGGCCCAACAAGACAAACTTGATAAA...CCAAACTAAAAAGTATGTTAGTTGAGGCAAAGTCCTAAGCAAGGTTGTGCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTATAGAATCTGGATTCTaGATCGCTTCAAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCIESGF*IASRSS
Trigger: AGAGGATCTTGAAGCGATCAAGAATCCAGATTCTAT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTGATAGCCTAGGCTTGTaGAAACACTGTCCTAATTTA +
Preference number: 5 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCDSLGL*KHCPNL
Trigger: TAAATTAGGACAGTGTTTCAACAAGCCTAGGCTATC...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTATTTCTACGATGGTATaGTGTAAGCGTTTAACCTCA +
Preference number: 5 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCISTMV*CKRLTS
Trigger: TGAGGTTAAACGCTTACACAATACCATCGTAGAAAT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TATAGTGGGATATTTTTCAACTTACGAGATAGCCTAGGCTTGTTGAAACACTGTATCAAGTTTGTCTTGTaGGGCCTTGAGTTTATGATT +
Preference number: 5 (lower is better)
Translates to: YSGIFFNLRDSLGLLKHCIKFVL*GLEFMI
Trigger: AATCATAAACTCAAGGCCCAACAAGACAAACTTGAT...ACAGTGTTTCAACAAGCCTAGGCTATCTCGTAAGTTGAAAAATATCCCACTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344722.5
ENST00000357388.8
CDS-3UTR CAA 90 bp TTTACCTCTTCTTCAGAGATTTCAATAACAAGTGAGGAACCCATTCTTCCTTTCTTTCATCATAGCAATTaGTTCAACTTCACCTTGCAG +
Preference number: 5 (lower is better)
Translates to: FTSSSEISITSEEPILPFFHHSN*FNFTLQ
Trigger: CTGCAAGGTGAAGTTGAACAAATTGCTATGATGAAA...GAAAGGAAGAATGGGTTCCTCACTTGTTATTGAAATCTCTGAAGAAGAGGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS GCA 90 bp CTTGCAGTAAATTTTTCTAGTGTGTTCCTCATTTCTCGTTCACTATaGCGTAACTTAACTACTCTTTCTTCAAGTTGTACTTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: LAVNFSSVFLISRSL*RNLTTLSSSCTFCS
Trigger: AGAACAGAAAGTACAACTTGAAGAAAGAGTAGTTAAGTTACGGCATAGTGAACGAGAAATGAGGAACACACTAGAAAAATTTACTGCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
CDS GCA 72 bp CACTTGCAGTCTCTGCGGCGGTGGCTGGGCTCTCCGTaGGGCCGGACGGCGGCTCAGGCTCCGCGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: HLQSLRRWLGSP*GRTAAQAPRRC
Trigger: GCAGCGACGCGGAGCCTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGAGACTGCAAGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462787.5
ENST00000465903.5
ENST00000468653.5
ENST00000485645.5
ENST00000489573.5
ENST00000490207.5
ENST00000497311.5
CDS GCA 72 bp ACCTTGCAGTCTCTGCGGCGGTGGCTGGGCTCTCCGTaGGGCCGGACGGCGGCTCAGGCTCCGCGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: TLQSLRRWLGSP*GRTAAQAPRRC
Trigger: GCAGCGACGCGGAGCCTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGAGACTGCAAGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS GCA 72 bp CATTGGTCATTGCTGCGGCGGTGGCTGGGCTCTCCGTaGGGCCGGACGGCGGCTCAGGCTCCGCGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: HWSLLRRWLGSP*GRTAAQAPRRC
Trigger: GCAGCGACGCGGAGCCTGAGCCGCCGTCCGGCCGCACGGAGAGCCCAGCCACCGCCGCAGCAATGACCAATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469762.5
CDS CCA 72 bp AGTGGAGGGCTGGGTGCCTTTACGGGGCATGGTCGCTaGGGCCGGGGGACAGCCGGGAGCAAGTCAGCCCGC +
Preference number: 6 (lower is better)
Translates to: SGGLGAFTGHGR*GRGTAGSKSAR
Trigger: GCGGGCTGACTTGCTCCCGGCTGTCCCCCGGCCCCAGCGACCATGCCCCGTAAAGGCACCCAGCCCTCCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344722.5
ENST00000462787.5
ENST00000465903.5
ENST00000489573.5
ENST00000490207.5
CDS CCA 72 bp CGCTTTCGGGGCCAGGGATGCAAGCGCGCACCGACGTaGAGAAACGAGTTCGTGTCCGGGTCAGGATCCCGT +
Preference number: 6 (lower is better)
Translates to: RFRGQGCKRAPT*RNEFVSGSGSR
Trigger: ACGGGATCCTGACCCGGACACGAACTCGTTTCTCCACGTCGGTGCGCGCTTGCATCCCTGGCCCCGAAAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CAA 90 bp CATGGTCGCTGCAGGACAGTCCACTCAGACCAAGGCTGGAGACGGTaGTGTAGTACCCACCTCCCCGCTCCTACCGGTGTTTCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: HGRCRTVHSDQGWRR*CSTHLPAPTGVSAP
Trigger: CGGAGCCGAAACACCGGTAGGAGCGGGGAGGTGGGTACTACACAACCGTCTCCAGCCTTGGTCTGAGTGGACTGTCCTGCAGCGACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357388.8
ENST00000468653.5
ENST00000469762.5
ENST00000469858.5
ENST00000497311.5
CDS CAA 90 bp AGACGTGCCTGCAGGACAGTCCACTCAGACCAAGGCTGGAGACGGTaGTGTAGTACCCACCTCCCCGCTCCTACCGGTGTTTCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: RRACRTVHSDQGWRR*CSTHLPAPTGVSAP
Trigger: CGGAGCCGAAACACCGGTAGGAGCGGGGAGGTGGGTACTACACAACCGTCTCCAGCCTTGGTCTGAGTGGACTGTCCTGCAGGCACGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465903.5
CDS CCA 72 bp TGGCTAGCAACTCTCTCCAGAGCGGTGAAGACTAACTaGCGACTCGCCGCCCGCTTTCGTCTGCCCGCCCTT +
Preference number: 6 (lower is better)
Translates to: WLATLSRAVKTN*RLAARFRLPAL
Trigger: AAGGGCGGGCAGACGAAAGCGGGCGGCGAGTCGCCAGTTAGTCTTCACCGCTCTGGAGAGAGTTGCTAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CAA 90 bp GAAAAGCGCTGCAGGACAGTCCACTCAGACCAAGGCTGGAGACGGTaGTGTAGTACCCACCTCCCCGCTCCTACCGGTGTTTCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: EKRCRTVHSDQGWRR*CSTHLPAPTGVSAP
Trigger: CGGAGCCGAAACACCGGTAGGAGCGGGGAGGTGGGTACTACACAACCGTCTCCAGCCTTGGTCTGAGTGGACTGTCCTGCAGCGCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472991.5
CDS TCA 72 bp AAAGATCTGCGAGGCTCAGGGCCTCCCCGAGACATTTaGGTAGCTTGGAAAAGTGGCGCCCGGGAGCTGCGC +
Preference number: 6 (lower is better)
Translates to: KDLRGSGPPRDI*VAWKSGARELR
Trigger: GCGCAGCTCCCGGGCGCCACTTTTCCAAGCTACTCAAATGTCTCGGGGAGGCCCTGAGCCTCGCAGATCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS GCA 72 bp CATTTCCGGACATTCCCACGCTTTCGGGGCCAGGGATaGAAGCGCGCACCGACGTGGAGAAACGAGTTCGTG +
Preference number: 6 (lower is better)
Translates to: HFRTFPRFRGQG*KRAPTWRNEFV
Trigger: CACGAACTCGTTTCTCCACGTCGGTGCGCGCTTGCATCCCTGGCCCCGAAAGCGTGGGAATGTCCGGAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CAA 90 bp AACAAGACCTGCAGGACAGTCCACTCAGACCAAGGCTGGAGACGGTaGTGTAGTACCCACCTCCCCGCTCCTACCGGTGTTTCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: NKTCRTVHSDQGWRR*CSTHLPAPTGVSAP
Trigger: CGGAGCCGAAACACCGGTAGGAGCGGGGAGGTGGGTACTACACAACCGTCTCCAGCCTTGGTCTGAGTGGACTGTCCTGCAGGTCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489573.5
CDS CAA 72 bp TGCAGGACAGTCCACTCAGACCAAGGCTGGAGACGGTaGTGTAGTACCCACCTCCCCGCTCCTACCGGTGTT +
Preference number: 6 (lower is better)
Translates to: CRTVHSDQGWRR*CSTHLPAPTGV
Trigger: AACACCGGTAGGAGCGGGGAGGTGGGTACTACACAACCGTCTCCAGCCTTGGTCTGAGTGGACTGTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000357388.8
ENST00000462787.5
ENST00000465903.5
ENST00000468653.5
ENST00000469762.5
ENST00000469858.5
ENST00000472991.5
ENST00000485867.5
ENST00000489573.5
ENST00000490207.5
ENST00000497311.5
CDS CCA 72 bp CAAGTCGGACGCTGGCAGCGCTTGCTAATTTTGGAGTaGCAAGAGTTTGTCTCTCCAGCTCCCCAGGCGGAG +
Preference number: 6 (lower is better)
Translates to: QVGRWQRLLILE*QEFVSPAPQAE
Trigger: CTCCGCCTGGGGAGCTGGAGAGACAAACTCTTGCCACTCCAAAATTAGCAAGCGCTGCCAGCGTCCGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CCA 72 bp GAGTTTGTCTCTCCAGCTCCCCAGGCGGAGTCCCGTTaGACAGTAAACCATGAAAGGTCACCAGCGAAGGCT +
Preference number: 6 (lower is better)
Translates to: EFVSPAPQAESR*TVNHERSPAKA
Trigger: AGCCTTCGCTGGTGACCTTTCATGGTTTACTGTCCAACGGGACTCCGCCTGGGGAGCTGGAGAGACAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CCA 72 bp GTGGAGAAACGAGTTCGTGTCCGGGTCAGGATCCCGTaGCTAGCAACTCTCTCCAGAGCGGTGAAGACTAAC +
Preference number: 6 (lower is better)
Translates to: VEKRVRVRVRIP*LATLSRAVKTN
Trigger: GTTAGTCTTCACCGCTCTGGAGAGAGTTGCTAGCCACGGGATCCTGACCCGGACACGAACTCGTTTCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CAA 72 bp CAACTTCAAGTCGGACGCTGGCAGCGCTTGCTAATTTaGGAGTGGCAAGAGTTTGTCTCTCCAGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: QLQVGRWQRLLI*EWQEFVSPAPQ
Trigger: CTGGGGAGCTGGAGAGACAAACTCTTGCCACTCCAAAATTAGCAAGCGCTGCCAGCGTCCGACTTGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462787.5
CDS CAA 90 bp ACCCTCATCGTGTTCAGTCTGGCCTTTTGGTTTCATCATAGCAATTaGTTCAACTTCACCTTGCAGTCTCTGCGGCGGTGGCTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: TLIVFSLAFWFHHSN*FNFTLQSLRRWLGS
Trigger: AGAGCCCAGCCACCGCCGCAGAGACTGCAAGGTGAAGTTGAACAAATTGCTATGATGAAACCAAAAGGCCAGACTGAACACGATGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS GCA 72 bp TATCATAAGCCGAGGAGCTCCAGCTTCATTGGTCATTaGTGGAGGCGGGGGAGGAGGAATGCTGTTCAAAAT +
Preference number: 6 (lower is better)
Translates to: YHKPRSSSFIGH*WRRGRRNAVQN
Trigger: ATTTTGAACAGCATTCCTCCTCCCCCGCCTCCAGCAATGACCAATGAAGCTGGAGCTCCTCGGCTTATGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462787.5
ENST00000465903.5
ENST00000468653.5
ENST00000485645.5
ENST00000485867.5
ENST00000489573.5
ENST00000490207.5
ENST00000497311.5
CDS CAA 72 bp GTGTTCAGTCTGGCCTTTTGGTTTCATCATAGCAATTaGTTCAACTTCACCTTGCAGTCTCTGCGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: VFSLAFWFHHSN*FNFTLQSLRRW
Trigger: CCACCGCCGCAGAGACTGCAAGGTGAAGTTGAACAAATTGCTATGATGAAACCAAAAGGCCAGACTGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469858.5
CDS GCA 72 bp GGATTCCTCTGCAGCATTTGTATTCTTTACGACCTCTaGTGCTTTGTCCTCAAGACTTTTCAGCTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GFLCSICILYDL*CFVLKTFQLCC
Trigger: ACAGCAGAGCTGAAAAGTCTTGAGGACAAAGCAGCAGAGGTCGTAAAGAATACAAATGCTGCAGAGGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000469762.5
CDS CCA 72 bp TTCCTTCTTTTTATACTCTGCGATGGCACCGAGGTTTaGTTTCATTTCATGACACCGGGCTTCCAAAAGTGC +
Preference number: 6 (lower is better)
Translates to: FLLFILCDGTEV*FHFMTPGFQKC
Trigger: GCACTTTTGGAAGCCCGGTGTCATGAAATGAAACCAAACCTCGGTGCCATCGCAGAGTATAAAAAGAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
ENST00000486711.1
CDS CAA 72 bp CTTCCTTCTTTTTATACTCTGCGATGGCACCGAGGTTaGGTTTCATTTCATGACACCGGGCTTCCAAAAGTG +
Preference number: 6 (lower is better)
Translates to: LPSFYTLRWHRG*VSFHDTGLPKV
Trigger: CACTTTTGGAAGCCCGGTGTCATGAAATGAAACCAAACCTCGGTGCCATCGCAGAGTATAAAAAGAAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
ENST00000486711.1
CDS GCA 72 bp TCATACCTCTGCAGCATTTGTATTCTTTACGACCTCTaGTGCTTTGTCCTCAAGACTTTTCAGCTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SYLCSICILYDL*CFVLKTFQLCC
Trigger: ACAGCAGAGCTGAAAAGTCTTGAGGACAAAGCAGCAGAGGTCGTAAAGAATACAAATGCTGCAGAGGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488017.1
CDS GCA 72 bp CCCATCTCCTCTTCAATACAAAGCAACTCATACCTCTaGAGCATTTGTATTCTTTACGACCTCTGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: PISSSIQSNSYL*SICILYDLCCF
Trigger: AAAGCAGCAGAGGTCGTAAAGAATACAAATGCTGCAGAGGTATGAGTTGCTTTGTATTGAAGAGGAGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488017.1
CDS CAA 90 bp TCCCATCTCCTCTTCAATACAAAGCAACTCATACCTCTGCAGCATTaGTATTCTTTACGACCTCTGCTGCTTTGTCCTCAAGACTTTTCA +
Preference number: 6 (lower is better)
Translates to: SHLLFNTKQLIPLQH*YSLRPLLLCPQDFS
Trigger: TGAAAAGTCTTGAGGACAAAGCAGCAGAGGTCGTAAAGAATACAAATGCTGCAGAGGTATGAGTTGCTTTGTATTGAAGAGGAGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488017.1
CDS TCA 72 bp CCCCTTCCTCCAAACAAGCCTAAAAACGTTTATGATTaGGAAGACGTAGACAAGATTCCCACCATATCCAAA +
Preference number: 6 (lower is better)
Translates to: PLPPNKPKNVYD*EDVDKIPTISK
Trigger: TTTGGATATGGTGGGAATCTTGTCTACGTCTTCTCAATCATAAACGTTTTTAGGCTTGTTTGGAGGAAGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497984.5
CDS GCA 72 bp TTGTGCCTTTTGAAGGTTTCTGTCAGCAGTCTTGATTaGTACTTGGGCTTTAGTAATAGCAGAAGCACATTC +
Preference number: 6 (lower is better)
Translates to: LCLLKVSVSSLD*YLGFSNSRSTF
Trigger: GAATGTGCTTCTGCTATTACTAAAGCCCAAGTAGCAATCAAGACTGCTGACAGAAACCTTCAAAAGGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
ENST00000488017.1
CDS CAA 72 bp GCTACATCCATCTTTGAACGTGCTTCATTTACCGATTaGCTGAAACCCATAAGTTCTTTCTCTCGACTCTGT +
Preference number: 6 (lower is better)
Translates to: ATSIFERASFTD*LKPISSFSRLC
Trigger: ACAGAGTCGAGAGAAAGAACTTATGGGTTTCAGCAAATCGGTAAATGAAGCACGTTCAAAGATGGATGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484799.1
CDS CAA 90 bp GAGGTTTGGTTTCATTTCATGACACCGGGCTTCCAAAAGTGCAATTaGATTTGTTATAGAATCTGGATTCTTGATCGCTTCAAGATCCTC +
Preference number: 6 (lower is better)
Translates to: EVWFHFMTPGFQKCN*ICYRIWILDRFKIL
Trigger: GAGGATCTTGAAGCGATCAAGAATCCAGATTCTATAACAAATCAAATTGCACTTTTGGAAGCCCGGTGTCATGAAATGAAACCAAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
ENST00000486711.1
CDS CAA 90 bp AATACAATTCTTCCTTCTTTTTATACTCTGCGATGGCACCGAGGTTaGGTTTCATTTCATGACACCGGGCTTCCAAAAGTGCAATTTGAT +
Preference number: 6 (lower is better)
Translates to: NTILPSFYTLRWHRG*VSFHDTGLPKVQFD
Trigger: ATCAAATTGCACTTTTGGAAGCCCGGTGTCATGAAATGAAACCAAACCTCGGTGCCATCGCAGAGTATAAAAAGAAGGAAGAATTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
ENST00000486711.1
CDS TCA 72 bp CTCTCCTTATTCCAAGATGATCCCTCTCCCCATAGTTaGAGAAGCACCTGTATTTTTGATTATGACAGCTAT +
Preference number: 6 (lower is better)
Translates to: LSLFQDDPSPHS*RSTCIFDYDSY
Trigger: ATAGCTGTCATAATCAAAAATACAGGTGCTTCTTCAACTATGGGGAGAGGGATCATCTTGGAATAAGGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462668.5
CDS CAA 72 bp TTTCATTTCATGACACCGGGCTTCCAAAAGTGCAATTaGATTTGTTATAGAATCTGGATTCTTGATCGCTTC +
Preference number: 6 (lower is better)
Translates to: FHFMTPGFQKCN*ICYRIWILDRF
Trigger: GAAGCGATCAAGAATCCAGATTCTATAACAAATCAAATTGCACTTTTGGAAGCCCGGTGTCATGAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344722.5
ENST00000357388.8
ENST00000462668.5
ENST00000462787.5
ENST00000469762.5
ENST00000486711.1