Pregenerated sensors for SMC2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000270332Ensembl transcript IDs: ENST00000603487.1, ENST00000603949.1, ENST00000664068.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGGCTTTAGGGTGGAGCCCTTGGAGGAACAGGACTGGGAAAGCATaGAGTTTCCAGGGCCTAATAAGCAGGCACAGCTGGAAGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LALGWSPWRNRTGKA*SFQGLISRHSWKAK Trigger: CTTTGCCTTCCAGCTGTGCCTGCTTATTAGGCCCTGGAAACTGCATGCTTTCCCAGTCCTGTTCCTCCAAGGGCTCCACCCTAAAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 90 bp | AGCCCAGTGGGTCTCAGCCTCACTTTGCCCAGACCCTATTCAAGATaGAGTTGCTCTGGTTCAAATGCCCCTGACACACCCATGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SPVGLSLTLPRPYSR*SCSGSNAPDTPMAE Trigger: TTCAGCCATGGGTGTGTCAGGGGCATTTGAACCAGAGCAACTCCATCTTGAATAGGGTCTGGGCAAAGTGAGGCTGAGACCCACTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS GCA 90 bp | AGAAAGGAAGTCAGAAGTTGTTCTACGGCACTGGGCAGTCTCCATTaGCCTTCCCAGAAGGAGTCTAGAGCAGCCAATTTTGAGCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: RKEVRSCSTALGSLH*PSQKESRAANFELA Trigger: TGCAAGCTCAAAATTGGCTGCTCTAGACTCCTTCTGGGAAGGGCAATGGAGACTGCCCAGTGCCGTAGAACAACTTCTGACTTCCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 90 bp | CAAACTCGACGGAGAATGTCCAAGCGTCTGGTGAAATGGGTCATCTaGGGTTTCAAAGATTTCAGGGCTTCCATAGTCACATGGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: QTRRRMSKRLVKWVI*GFKDFRASIVTWTG Trigger: TCCTGTCCATGTGACTATGGAAGCCCTGAAATCTTTGAAACCCCAGATGACCCATTTCACCAGACGCTTGGACATTCTCCGTCGAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 90 bp | AAAAGGAAAATTCAAGAAAGGAAGTCAGAAGTTGTTCTACGGCACTaGGCAGTCTCCATTGCCCTTCCCAGAAGGAGTCTAGAGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: KRKIQERKSEVVLRH*AVSIALPRRSLEQP Trigger: TGGCTGCTCTAGACTCCTTCTGGGAAGGGCAATGGAGACTGCCCAGTGCCGTAGAACAACTTCTGACTTCCTTTCTTGAATTTTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 90 bp | GCCTTTAAGCTCTCTGTCTTAGGAGAGGCTCTAACTCTCCTAAGTTaGGCCTCTAACCCAATTCCATCCTTTAACCAGGTAAAATGGTTC | + |
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Preference number: 5 (lower is better) Translates to: AFKLSVLGEALTLLS*ASNPIPSFNQVKWF Trigger: GAACCATTTTACCTGGTTAAAGGATGGAATTGGGTTAGAGGCCCAACTTAGGAGAGTTAGAGCCTCTCCTAAGACAGAGAGCTTAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 90 bp | AGAAAAGAGGGAATCAGGAATGAGATAATGTCCTTTGCAGGGACATaGCTGAAGCTGGAAGCCATTATCCTCAGCAAACTAACACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RKEGIRNEIMSFAGT*LKLEAIILSKLTQE Trigger: TTCCTGTGTTAGTTTGCTGAGGATAATGGCTTCCAGCTTCAGCCATGTCCCTGCAAAGGACATTATCTCATTCCTGATTCCCTCTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS TCA 90 bp | TGGAGCCCAGGGGATGCAGGAATCAAGGCAGACAAAGATATCTGTTaGATTAAATTAATGTTAGGTCACTACCCATGGTTGACATCACAG | + |
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Preference number: 5 (lower is better) Translates to: WSPGDAGIKADKDIC*IKLMLGHYPWLTSQ Trigger: CTGTGATGTCAACCATGGGTAGTGACCTAACATTAATTTAATTCAACAGATATCTTTGTCTGCCTTGATTCCTGCATCCCCTGGGCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603949.1 |
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| CDS GCA 90 bp | TCTGCACATTCTTCTAACCACCCAGGAGTCCTTATCCAACAACAGTaGACTTGTGTATGTTTTCATCCATGTGACGTAAGTGTATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SAHSSNHPGVLIQQQ*TCVCFHPCDVSVSA Trigger: AGCTGATACACTTACGTCACATGGATGAAAACATACACAAGTGCACTGTTGTTGGATAAGGACTCCTGGGTGGTTAGAAGAATGTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS GCA 90 bp | AAAAGGGTCCTGATCAAGACTTTAAGTGAGGGTTCTTGGACCTCATaGAAGAAAGAATTTGGGGTGAGTCCACAGAGTAAAGTGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: KRVLIKTLSEGSWTS*KKEFGVSPQSKVKA Trigger: TGCTTTCACTTTACTCTGTGGACTCACCCCAAATTCTTTCTTGCATGAGGTCCAAGAACCCTCACTTAAAGTCTTGATCAGGACCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 90 bp | TGTTACCAGAAAAGGGTCCTGATCAAGACTTTAAGTGAGGGTTCTTaGACCTCATGCAAGAAAGAATTTGGGGTGAGTCCACAGAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: CYQKRVLIKTLSEGS*TSCKKEFGVSPQSK Trigger: TTTACTCTGTGGACTCACCCCAAATTCTTTCTTGCATGAGGTCCAAGAACCCTCACTTAAAGTCTTGATCAGGACCCTTTTCTGGTAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 90 bp | CTTGGAAGATTTTCCATTTGCTTACAATCCATTAAGTTTCTTAATTaGATTGCTGGCTTTAGGGTGGAGCCCTTGGAGGAACAGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: LGRFSICLQSIKFLN*IAGFRVEPLEEQDW Trigger: CCAGTCCTGTTCCTCCAAGGGCTCCACCCTAAAGCCAGCAATCCAATTAAGAAACTTAATGGATTGTAAGCAAATGGAAAATCTTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS GCA 90 bp | AAGAAGATGCCACCAAACAGCACTATTAAGAACATTTCCTCCTATTaGTCCTGGTCATCACTGCTACCTCTGCTAAATCCAATCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KKMPPNSTIKNISSY*SWSSLLPLLNPICF Trigger: AAAGCAGATTGGATTTAGCAGAGGTAGCAGTGATGACCAGGAGCAATAGGAGGAAATGTTCTTAATAGTGCTGTTTGGTGGCATCTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS TCA 90 bp | GACACACCCAGGAACAATACTTTGCATCCTTCAATCCAATCAATTTaGTACTCAGTATTAACCACCAAATGGGGGCTTAAGCCTGTATTC | + |
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Preference number: 5 (lower is better) Translates to: DTPRNNTLHPSIQSI*YSVLTTKWGLKPVF Trigger: GAATACAGGCTTAAGCCCCCATTTGGTGGTTAATACTGAGTATCAAATTGATTGGATTGAAGGATGCAAAGTATTGTTCCTGGGTGTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS TCA 90 bp | ATTTTTAGGGCTAACTATGATATGAACCCCAAAGTTCCTGTTCTCTaGATGGCAGAGACAAAGAGGAAGTACTGCCACATGGTTATAAGG | + |
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Preference number: 5 (lower is better) Translates to: IFRANYDMNPKVPVL*MAETKRKYCHMVIR Trigger: CCTTATAACCATGTGGCAGTACTTCCTCTTTGTCTCTGCCATTCAGAGAACAGGAACTTTGGGGTTCATATCATAGTTAGCCCTAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS TCA 90 bp | TTTGGCCAGCTTCTGTACCATATTATTTTATCAGTAAGGTCTTTGTaGCCTGTATCTTGTGCCAACCTCCTATCTCATCCTGTAACTAAG | + |
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Preference number: 5 (lower is better) Translates to: FGQLLYHIILSVRSL*PVSCANLLSHPVTK Trigger: CTTAGTTACAGGATGAGATAGGAGGTTGGCACAAGATACAGGTCACAAAGACCTTACTGATAAAATAATATGGTACAGAAGCTGGCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 90 bp | CTAAGTTGGGCCTCTAACCCAATTCCATCCTTTAACCAGGTAAAATaGTTCCTATCACTTACCCAAAGTCATACAATTGGTGATCTAATC | + |
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Preference number: 5 (lower is better) Translates to: LSWASNPIPSFNQVK*FLSLTQSHTIGDLI Trigger: GATTAGATCACCAATTGTATGACTTTGGGTAAGTGATAGGAACCATTTTACCTGGTTAAAGGATGGAATTGGGTTAGAGGCCCAACTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS TCA 90 bp | ATATCCCATAATGTGAAATCCATTTTTAACCAAGAAGGACTTTACTaGGAGGAGCTTCTAACCCCCTTAATCTTAGGAAGGACTCTAACC | + |
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Preference number: 5 (lower is better) Translates to: ISHNVKSIFNQEGLY*EELLTPLILGRTLT Trigger: GGTTAGAGTCCTTCCTAAGATTAAGGGGGTTAGAAGCTCCTCTCAGTAAAGTCCTTCTTGGTTAAAAATGGATTTCACATTATGGGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 90 bp | TCACTTACCCAAAGTCATACAATTGGTGATCTAATCTATTTCTTTTaGGTAGGGAGTCTCCTTAGTTTAATCTCATTGTGGTCACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLTQSHTIGDLIYFF*VGSLLSLISLWSPG Trigger: TCCTGGTGACCACAATGAGATTAAACTAAGGAGACTCCCTACCCAAAAGAAATAGATTAGATCACCAATTGTATGACTTTGGGTAAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | CCAAGCTGGCAGCTGAATAGATGGTACCCATCCAGATaGAGGGTGGGTCAGCCTCTCCCAGTCCACCAACTC | + |
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Preference number: 6 (lower is better) Translates to: PSWQLNRWYPSR*RVGQPLPVHQL Trigger: GAGTTGGTGGACTGGGAGAGGCTGACCCACCCTCAATCTGGATGGGTACCATCTATTCAGCTGCCAGCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS GCA 72 bp | CCTGGGAATGCAGCCCAGTGGGTCTCAGCCTCACTTTaGCCAGACCCTATTCAAGATGGAGTTGCTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: PGNAAQWVSASL*PDPIQDGVALV Trigger: AACCAGAGCAACTCCATCTTGAATAGGGTCTGGGCAAAGTGAGGCTGAGACCCACTGGGCTGCATTCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CAA 72 bp | TCCTGGGAATGCAGCCCAGTGGGTCTCAGCCTCACTTaGCCCAGACCCTATTCAAGATGGAGTTGCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SWECSPVGLSLT*PRPYSRWSCSG Trigger: ACCAGAGCAACTCCATCTTGAATAGGGTCTGGGCAAAGTGAGGCTGAGACCCACTGGGCTGCATTCCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | GGTCTCAGCCTCACTTTGCCCAGACCCTATTCAAGATaGAGTTGCTCTGGTTCAAATGCCCCTGACACACCC | + |
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Preference number: 6 (lower is better) Translates to: GLSLTLPRPYSR*SCSGSNAPDTP Trigger: GGGTGTGTCAGGGGCATTTGAACCAGAGCAACTCCATCTTGAATAGGGTCTGGGCAAAGTGAGGCTGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS TCA 72 bp | TACAAGGTGAAGTCCCACAATAGGCCATCTGCAAGCTaGGAGGCCAGGAAGCCAGTCCCAGTCCTAAAACCT | + |
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Preference number: 6 (lower is better) Translates to: YKVKSHNRPSAS*EARKPVPVLKP Trigger: AGGTTTTAGGACTGGGACTGGCTTCCTGGCCTCTCAGCTTGCAGATGGCCTATTGTGGGACTTCACCTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS GCA 72 bp | AGCCTCACTTTGCCCAGACCCTATTCAAGATGGAGTTaGTCTGGTTCAAATGCCCCTGACACACCCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLTLPRPYSRWS*SGSNAPDTPMA Trigger: AGCCATGGGTGTGTCAGGGGCATTTGAACCAGAGCAACTCCATCTTGAATAGGGTCTGGGCAAAGTGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | TGGAGTCTGATGTTCAAGGCCAGGAAGCATCCAGCATaGGAGAAACATGGAGGCCAGAAGACTCAGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: WSLMFKARKHPA*EKHGGQKTQPV Trigger: AACTGGCTGAGTCTTCTGGCCTCCATGTTTCTCCCATGCTGGATGCTTCCTGGCCTTGAACATCAGACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | GTTCAAGGCCAGGAAGCATCCAGCATGGGAGAAACATaGAGGCCAGAAGACTCAGCCAGTTTAGTCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VQGQEASSMGET*RPEDSASLVFP Trigger: TGGAAAGACTAAACTGGCTGAGTCTTCTGGCCTCCATGTTTCTCCCATGCTGGATGCTTCCTGGCCTTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | CAAACTCGACGGAGAATGTCCAAGCGTCTGGTGAAATaGGTCATCTGGGGTTTCAAAGATTTCAGGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QTRRRMSKRLVK*VIWGFKDFRAS Trigger: GGAAGCCCTGAAATCTTTGAAACCCCAGATGACCCATTTCACCAGACGCTTGGACATTCTCCGTCGAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | CTCTCCCAGTCCACCAACTCAAATGTTAATCTCCTTTaGCAGCACCCTCACAGACACACCCAGGAACAATAC | + |
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Preference number: 6 (lower is better) Translates to: LSQSTNSNVNLL*QHPHRHTQEQY Trigger: GTATTGTTCCTGGGTGTGTCTGTGAGGGTGCTGCCAAAGGAGATTAACATTTGAGTTGGTGGACTGGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | CGAAGAAGTTGCCCACAGGAGATTGGGAGAGAATACTaGCAACGGCAGAAAAGACTTGGAGACATGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RRSCPQEIGREY*QRQKRLGDMIF Trigger: GAAGATCATGTCTCCAAGTCTTTTCTGCCGTTGCCAGTATTCTCTCCCAATCTCCTGTGGGCAACTTCTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | CGGAGAATGTCCAAGCGTCTGGTGAAATGGGTCATCTaGGGTTTCAAAGATTTCAGGGCTTCCATAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: RRMSKRLVKWVI*GFKDFRASIVT Trigger: TGTGACTATGGAAGCCCTGAAATCTTTGAAACCCCAGATGACCCATTTCACCAGACGCTTGGACATTCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | ATTCAAGAAAGGAAGTCAGAAGTTGTTCTACGGCACTaGGCAGTCTCCATTGCCCTTCCCAGAAGGAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: IQERKSEVVLRH*AVSIALPRRSL Trigger: TAGACTCCTTCTGGGAAGGGCAATGGAGACTGCCCAGTGCCGTAGAACAACTTCTGACTTCCTTTCTTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | CCATTAAGTTTCTTAATTGGATTGCTGGCTTTAGGGTaGAGCCCTTGGAGGAACAGGACTGGGAAAGCATGC | + |
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Preference number: 6 (lower is better) Translates to: PLSFLIGLLALG*SPWRNRTGKAC Trigger: GCATGCTTTCCCAGTCCTGTTCCTCCAAGGGCTCCACCCTAAAGCCAGCAATCCAATTAAGAAACTTAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | CATGAGTGTTTTCCCGAAGAAGTTGCCCACAGGAGATaGGGAGAGAATACTGGCAACGGCAGAAAAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: HECFPEEVAHRR*GENTGNGRKDL Trigger: CAAGTCTTTTCTGCCGTTGCCAGTATTCTCTCCCAATCTCCTGTGGGCAACTTCTTCGGGAAAACACTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS TCA 72 bp | AAATCCAAACTCGACGGAGAATGTCCAAGCGTCTGGTaGAATGGGTCATCTGGGGTTTCAAAGATTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: KSKLDGECPSVW*NGSSGVSKISG Trigger: CCCTGAAATCTTTGAAACCCCAGATGACCCATTTCACCAGACGCTTGGACATTCTCCGTCGAGTTTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | CTCTCTGTCTTAGGAGAGGCTCTAACTCTCCTAAGTTaGGCCTCTAACCCAATTCCATCCTTTAACCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LSVLGEALTLLS*ASNPIPSFNQV Trigger: TACCTGGTTAAAGGATGGAATTGGGTTAGAGGCCCAACTTAGGAGAGTTAGAGCCTCTCCTAAGACAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | CCCTTAATCTTAGGAAGGACTCTAACCTTCCTAGTTTaGGCCTTGAACCTAAGTTCCATCAAGCGTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PLILGRTLTFLV*ALNLSSIKRPC Trigger: GCAAGGACGCTTGATGGAACTTAGGTTCAAGGCCCAAACTAGGAAGGTTAGAGTCCTTCCTAAGATTAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | AATCAACCCATCTCCCATAGGAGTCTCATCTCTCAGTaGGGAATGGGGACATTTTCATACTTTCTAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: NQPISHRSLISQ*GMGTFSYFLGG Trigger: GCCACCTAGAAAGTATGAAAATGTCCCCATTCCCCACTGAGAGATGAGACTCCTATGGGAGATGGGTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | CCCCTTAATCTTAGGAAGGACTCTAACCTTCCTAGTTaGGGCCTTGAACCTAAGTTCCATCAAGCGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PLNLRKDSNLPS*GLEPKFHQASL Trigger: CAAGGACGCTTGATGGAACTTAGGTTCAAGGCCCAAACTAGGAAGGTTAGAGTCCTTCCTAAGATTAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS TCA 72 bp | AATGAGTGGATGGACTTTCATCTCAGCTCCGCTCTGTaGTCAAAGCCTAGTTCCAAGATCCAGCTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: NEWMDFHLSSAL*SKPSSKIQLLH Trigger: ATGAAGAAGCTGGATCTTGGAACTAGGCTTTGATCACAGAGCGGAGCTGAGATGAAAGTCCATCCACTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | GATTGGGAGAGAATACTGGCAACGGCAGAAAAGACTTaGAGACATGATCTTCATCATCTGTGTGATCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: DWERILATAEKT*RHDLHHLCDLR Trigger: CCTGAGATCACACAGATGATGAAGATCATGTCTCCAAGTCTTTTCTGCCGTTGCCAGTATTCTCTCCCAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | GGAATCAGGAATGAGATAATGTCCTTTGCAGGGACATaGCTGAAGCTGGAAGCCATTATCCTCAGCAAACTA | + |
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Preference number: 6 (lower is better) Translates to: GIRNEIMSFAGT*LKLEAIILSKL Trigger: TAGTTTGCTGAGGATAATGGCTTCCAGCTTCAGCCATGTCCCTGCAAAGGACATTATCTCATTCCTGATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 90 bp | GCTTCTAACCCCCTTAATCTTAGGAAGGACTCTAACCTTCCTAGTTaGGGCCTTGAACCTAAGTTCCATCAAGCGTCCTTGCCTTTTATT | + |
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Preference number: 6 (lower is better) Translates to: ASNPLNLRKDSNLPS*GLEPKFHQASLPFI Trigger: AATAAAAGGCAAGGACGCTTGATGGAACTTAGGTTCAAGGCCCAAACTAGGAAGGTTAGAGTCCTTCCTAAGATTAAGGGGGTTAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS TCA 72 bp | TCTTTGATCCACTCAAATTGGTGTGGAATGATCTTCTaGCCAGGAGTTTCCACATGTGGTTTCTGGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SLIHSNWCGMIF*PGVSTCGFWAN Trigger: GTTTGCCCAGAAACCACATGTGGAAACTCCTGGTCAGAAGATCATTCCACACCAATTTGAGTGGATCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS GCA 72 bp | CCACCAAACAGCACTATTAAGAACATTTCCTCCTATTaGTCCTGGTCATCACTGCTACCTCTGCTAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: PPNSTIKNISSY*SWSSLLPLLNP Trigger: TGGATTTAGCAGAGGTAGCAGTGATGACCAGGAGCAATAGGAGGAAATGTTCTTAATAGTGCTGTTTGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | AAAAGGGTCCTGATCAAGACTTTAAGTGAGGGTTCTTaGACCTCATGCAAGAAAGAATTTGGGGTGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: KRVLIKTLSEGS*TSCKKEFGVSP Trigger: TGGACTCACCCCAAATTCTTTCTTGCATGAGGTCCAAGAACCCTCACTTAAAGTCTTGATCAGGACCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | TTGGGCCTTTTCATCTTTGATCCACTCAAATTGGTGTaGAATGATCTTCTGACCAGGAGTTTCCACATGTGG | + |
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Preference number: 6 (lower is better) Translates to: LGLFIFDPLKLV*NDLLTRSFHMW Trigger: CCACATGTGGAAACTCCTGGTCAGAAGATCATTCCACACCAATTTGAGTGGATCAAAGATGAAAAGGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | CTCTCAATTTTGCAAGATGTCACCCAAGAGATTGCATaGGGTAACCCAATTAACATCTTCCAAACCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LSILQDVTQEIA*GNPINIFQTSQ Trigger: CTGGCTGGTTTGGAAGATGTTAATTGGGTTACCCCATGCAATCTCTTGGGTGACATCTTGCAAAATTGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | GATTGGGAGAGAATACTGGCAACGGCAGAAAAGACTTaGAGACATGATCTTCATCATTTCTGCGGTAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: DWERILATAEKT*RHDLHHFCGKV Trigger: GACTTTACCGCAGAAATGATGAAGATCATGTCTCCAAGTCTTTTCTGCCGTTGCCAGTATTCTCTCCCAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664068.1 |
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| CDS CAA 72 bp | ATCTTAGGAAGGACTCTAACCTTCCTAGTTTGGGCCTaGAACCTAAGTTCCATCAAGCGTCCTTGCCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: ILGRTLTFLVWA*NLSSIKRPCLL Trigger: TAAAAGGCAAGGACGCTTGATGGAACTTAGGTTCAAGGCCCAAACTAGGAAGGTTAGAGTCCTTCCTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | CCATTTGCTTACAATCCATTAAGTTTCTTAATTGGATaGCTGGCTTTAGGGTGGAGCCCTTGGAGGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: PFAYNPLSFLIG*LALGWSPWRNR Trigger: CCTGTTCCTCCAAGGGCTCCACCCTAAAGCCAGCAATCCAATTAAGAAACTTAATGGATTGTAAGCAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 90 bp | GTTCCAAGATCCAGCTTCTTCATATTTTCGCTTGTCCTTATGAAATaGCATGAGTGTTTTCCCGAAGAAGTTGCCCACAGGAGATTGGGA | + |
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Preference number: 6 (lower is better) Translates to: VPRSSFFIFSLVLMK*HECFPEEVAHRRLG Trigger: TCCCAATCTCCTGTGGGCAACTTCTTCGGGAAAACACTCATGCAATTTCATAAGGACAAGCGAAAATATGAAGAAGCTGGATCTTGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS GCA 72 bp | TCTTCTAACCACCCAGGAGTCCTTATCCAACAACAGTaGACTTGTGTATGTTTTCATCCATGTGACGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSNHPGVLIQQQ*TCVCFHPCDVS Trigger: ACTTACGTCACATGGATGAAAACATACACAAGTGCACTGTTGTTGGATAAGGACTCCTGGGTGGTTAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS GCA 72 bp | CTGATCAAGACTTTAAGTGAGGGTTCTTGGACCTCATaGAAGAAAGAATTTGGGGTGAGTCCACAGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LIKTLSEGSWTS*KKEFGVSPQSK Trigger: TTTACTCTGTGGACTCACCCCAAATTCTTTCTTGCATGAGGTCCAAGAACCCTCACTTAAAGTCTTGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS GCA 72 bp | GCAGCACCCTCACAGACACACCCAGGAACAATACTTTaGATCCTTCAATCCAATCAATTTGATACTCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: AAPSQTHPGTIL*ILQSNQFDTQY Trigger: ATACTGAGTATCAAATTGATTGGATTGAAGGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGGGTGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | TCCAGCTTCTTCATATTTTCGCTTGTCCTTATGAAATaGCATGAGTGTTTTCCCGAAGAAGTTGCCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSFFIFSLVLMK*HECFPEEVAHR Trigger: CCTGTGGGCAACTTCTTCGGGAAAACACTCATGCAATTTCATAAGGACAAGCGAAAATATGAAGAAGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CAA 72 bp | CCATTTCATGAAACCATAGGCAAAAGCCTCTCAATTTaGCAAGATGTCACCCAAGAGATTGCATGGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: PFHETIGKSLSI*QDVTQEIAWGN Trigger: GTTACCCCATGCAATCTCTTGGGTGACATCTTGCAAAATTGAGAGGCTTTTGCCTATGGTTTCATGAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | CATTGGTTTAAGTCCAAGAATCCTAAACTAAAGAACTaGGAGTCTGATGTTCAAGGCCAGGAAGCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: HWFKSKNPKLKN*ESDVQGQEASS Trigger: GCTGGATGCTTCCTGGCCTTGAACATCAGACTCCAAGTTCTTTAGTTTAGGATTCTTGGACTTAAACCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 90 bp | GAAGATTTTCCATTTGCTTACAATCCATTAAGTTTCTTAATTGGATaGCTGGCTTTAGGGTGGAGCCCTTGGAGGAACAGGACTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: EDFPFAYNPLSFLIG*LALGWSPWRNRTGK Trigger: TTTCCCAGTCCTGTTCCTCCAAGGGCTCCACCCTAAAGCCAGCAATCCAATTAAGAAACTTAATGGATTGTAAGCAAATGGAAAATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS TCA 72 bp | CAAGATCCAGCTTCTTCATATTTTCGCTTGTCCTTATaGAATTGCATGAGTGTTTTCCCGAAGAAGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QDPASSYFRLSL*NCMSVFPKKLP Trigger: GGGCAACTTCTTCGGGAAAACACTCATGCAATTTCATAAGGACAAGCGAAAATATGAAGAAGCTGGATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS TCA 72 bp | ATGTTACCAGAAAAGGGTCCTGATCAAGACTTTAAGTaGGGGTTCTTGGACCTCATGCAAGAAAGAATTTGG | + |
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Preference number: 6 (lower is better) Translates to: MLPEKGPDQDFK*GFLDLMQERIW Trigger: CCAAATTCTTTCTTGCATGAGGTCCAAGAACCCTCACTTAAAGTCTTGATCAGGACCCTTTTCTGGTAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | ATTGCCCTTCCCAGAAGGAGTCTAGAGCAGCCAATTTaGAGCTTGCAAAGCCTTTTAACTGCTCAATATAAT | + |
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Preference number: 6 (lower is better) Translates to: IALPRRSLEQPI*SLQSLLTAQYN Trigger: ATTATATTGAGCAGTTAAAAGGCTTTGCAAGCTCAAAATTGGCTGCTCTAGACTCCTTCTGGGAAGGGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | ATTCCTGGTAGGTTAAGACCAATTCAGATGACTGCATaGCCATTCCAGGGCCAAGAAAGCAACTTTAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: IPGRLRPIQMTA*PFQGQESNFKN Trigger: GTTTTTAAAGTTGCTTTCTTGGCCCTGGAATGGCAATGCAGTCATCTGAATTGGTCTTAACCTACCAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603949.1 |
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| CDS TCA 72 bp | CTTCTTCATATTTTCGCTTGTCCTTATGAAATTGCATaGGTGTTTTCCCGAAGAAGTTGCCCACAGGAGATT | + |
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Preference number: 6 (lower is better) Translates to: LLHIFACPYEIA*VFSRRSCPQEI Trigger: AATCTCCTGTGGGCAACTTCTTCGGGAAAACACTCATGCAATTTCATAAGGACAAGCGAAAATATGAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS CCA 72 bp | GCCTCTAACCCAATTCCATCCTTTAACCAGGTAAAATaGTTCCTATCACTTACCCAAAGTCATACAATTGGT | + |
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Preference number: 6 (lower is better) Translates to: ASNPIPSFNQVK*FLSLTQSHTIG Trigger: ACCAATTGTATGACTTTGGGTAAGTGATAGGAACCATTTTACCTGGTTAAAGGATGGAATTGGGTTAGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | AGTATCAAACTGGGAAGGCTCAAACATGATTCTAGTTaGGCCTTTTCATCTTTGATCCACTCAAATTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SIKLGRLKHDSS*AFSSLIHSNWC Trigger: ACACCAATTTGAGTGGATCAAAGATGAAAAGGCCCAACTAGAATCATGTTTGAGCCTTCCCAGTTTGATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | TTTTCCATTTGCTTACAATCCATTAAGTTTCTTAATTaGATTGCTGGCTTTAGGGTGGAGCCCTTGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: FSICLQSIKFLN*IAGFRVEPLEE Trigger: TTCCTCCAAGGGCTCCACCCTAAAGCCAGCAATCCAATTAAGAAACTTAATGGATTGTAAGCAAATGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS TCA 72 bp | AGGGACATTGCTTTTTCACTAGGAATTTACTCCTTATaGGCAGTGCCTAAAGTGGTTCAGATTTTATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RDIAFSLGIYSL*AVPKVVQILCP Trigger: AGGACATAAAATCTGAACCACTTTAGGCACTGCTCATAAGGAGTAAATTCCTAGTGAAAAAGCAATGTCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS TCA 72 bp | CTTCTGTACCATATTATTTTATCAGTAAGGTCTTTGTaGCCTGTATCTTGTGCCAACCTCCTATCTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: LLYHIILSVRSL*PVSCANLLSHP Trigger: AGGATGAGATAGGAGGTTGGCACAAGATACAGGTCACAAAGACCTTACTGATAAAATAATATGGTACAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS TCA 72 bp | ATGGTTCCTATCACTTACCCAAAGTCATACAATTGGTaGTCTAATCTATTTCTTTTGGGTAGGGAGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: MVPITYPKSYNW*SNLFLLGRESP Trigger: AGGAGACTCCCTACCCAAAAGAAATAGATTAGATCACCAATTGTATGACTTTGGGTAAGTGATAGGAACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CAA 72 bp | TGGCTACTCCATAGACAGAGCAGTGGCATAGGCTGCTaGACTGATTATACTTATAGTTATTTGATTATATGC | + |
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Preference number: 6 (lower is better) Translates to: WLLHRQSSGIGC*TDYTYSYLIIC Trigger: GCATATAATCAAATAACTATAAGTATAATCAGTCAAGCAGCCTATGCCACTGCTCTGTCTATGGAGTAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000603487.1 ENST00000664068.1 |
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| CDS TCA 72 bp | AGGAACAATACTTTGCATCCTTCAATCCAATCAATTTaGTACTCAGTATTAACCACCAAATGGGGGCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: RNNTLHPSIQSI*YSVLTTKWGLK Trigger: CTTAAGCCCCCATTTGGTGGTTAATACTGAGTATCAAATTGATTGGATTGAAGGATGCAAAGTATTGTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS CCA 72 bp | CAAAGTCATACAATTGGTGATCTAATCTATTTCTTTTaGGTAGGGAGTCTCCTTAGTTTAATCTCATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QSHTIGDLIYFF*VGSLLSLISLW Trigger: CCACAATGAGATTAAACTAAGGAGACTCCCTACCCAAAAGAAATAGATTAGATCACCAATTGTATGACTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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| CDS GCA 72 bp | AAACCTTGTTCAACAGAGAAAGCCAAATTTCACCTTTaGATTAATGCAGTATTGATGCCAAACCTAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: KPCSTEKAKFHL*INAVLMPNLIL Trigger: AAGAATTAGGTTTGGCATCAATACTGCATTAATGCAAAGGTGAAATTTGGCTTTCTCTGTTGAACAAGGTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603487.1 |
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