RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136824

Ensembl transcript IDs: ENST00000286398.11, ENST00000374787.7, ENST00000374793.8, ENST00000440179.5, ENST00000493955.1

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAAGGCTGCATCTACCTCATCAAGGATATAAATTGGAGCAGGTTTaGAGAGAAGCATGGACAGTATTAATGACAAGGCCACTAAAGACC +
Preference number: 1 (lower is better)
Translates to: PRLHLPHQGYKLEQV*REAWTVLMTRPLKT
Trigger: GGTCTTTAGTGGCCTTGTCATTAATACTGTCCATGCTTCTCTTCAAACCTGCTCCAATTTATATCCTTGATGAGGTAGATGCAGCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR GCA 90 bp ACGCAGCATCTGTCCAATGTTTTGGGTATGAGAAAGATCCAAGGCTaGATCTACCTCATCAAGGATATAAATTGGAGCAGGTTTGAAGAG +
Preference number: 1 (lower is better)
Translates to: TQHLSNVLGMRKIQG*IYLIKDINWSRFEE
Trigger: CTCTTCAAACCTGCTCCAATTTATATCCTTGATGAGGTAGATGCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAGATGCTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR CCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTaGGGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGT +
Preference number: 1 (lower is better)
Translates to: MEDQITSCQTFHDSV*GHCSSDDVPKTVDS
Trigger: ACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTGGAATTTCATCCCTTTaGACTGGAAAGCGGAAGACA +
Preference number: 2 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTGISSL*TGKRKT
Trigger: TGTCTTCCGCTTTCCAGTTCAAAGGGATGAAATTCC...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTAATCAAGAAGAGATGTaGGGCCAAAATAACACATGG +
Preference number: 2 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTNQEEM*GQNNTW
Trigger: CCATGTGTTATTTTGGCCCCACATCTCTTCTTGATT...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCATGGAGAATGAAGGGTaGGAAATGTCAAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSMENEG*EMSSPG
Trigger: CCCTGGGCTTGACATTTCCCACCCTTCATTCTCCAT...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR CAA 90 bp GAACTGAGAATGTGTGAAATGAGTACGCAGCATCTGTCCAATGTTTaGGGTATGAGAAAGATCCAAGGCTGCATCTACCTCATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: ELRMCEMSTQHLSNV*GMRKIQGCIYLIKD
Trigger: ATCCTTGATGAGGTAGATGCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAGATGCTGCGTACTCATTTCACACATTCTCAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR-3UTR TCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCATGTCAGACCTTTCATaGTTCAGTTTGGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: STHSIPRLHHADNNSIYLMSDLS*FSLGSL
Trigger: CAGTGACCCCAAACTGAATCATGAAAGGTCTGACAT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR GCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTGAGATGAGGAATATATaGTCATTTGTAAGCGATAAG +
Preference number: 2 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTEMRNI*SFVSDK
Trigger: CTTATCGCTTACAAATGAGCATATATTCCTCATCTC...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCCATATGTATGGAGAATaGAGGGTGGGAAATGTCAAG +
Preference number: 2 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSHMYGE*RVGNVK
Trigger: CTTGACATTTCCCACCCTTCATTCTCCATACATATG...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR TCA 90 bp CCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACATACCTTCTCCAATGTTTTGGGTATaGGAAAGATCCAAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: PSTNLVLKRTFALLNIPSPMFWV*ERSKAA
Trigger: TGCAGCCTTGGATCTTTCTCATACCCAAAACATTGG...AGAAGGTATGTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGATGTGTTCCCTTTGTTaGTCCAGTTACCTGATTTAT +
Preference number: 2 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVMCSLC*SSYLIY
Trigger: ATAAATCAGGTAACTGGACCAACAAAGGGAACACAT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCGTTGGTCCAGTTACCTaGTTTATAATTCTTCCTTAC +
Preference number: 2 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSVGPVT*FIILPY
Trigger: GTAAGGAAGAATTATAAATCAGGTAACTGGACCAAC...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR TCA 90 bp CCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACATACCTTCTAAATTGGAGCAGGTTTaGAGAGAAGCATGGACAGTA +
Preference number: 2 (lower is better)
Translates to: PSTNLVLKRTFALLNIPSKLEQV*REAWTV
Trigger: TACTGTCCATGCTTCTCTTCAAACCTGCTCCAATTT...AGAAGGTATGTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR-3UTR GCA 90 bp CCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACATACCTTCTAGAAAGATCCAAGGCTaGATCTACCTCATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: PSTNLVLKRTFALLNIPSRKIQG*IYLIKD
Trigger: ATCCTTGATGAGGTAGATGCAGCCTTGGATCTTTCT...AGAAGGTATGTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTAAACTTCCACATGTaGTCCTTTGGGTGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: LLHIESGISGSLIYKRPALNFHM*SFGWFC
Trigger: GCAAAACCACCCAAAGGAGCACATGTGGAAGTTTAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCATGTGTTCCCTTTGTTaGTCCAGTTACCTGATTTAT +
Preference number: 2 (lower is better)
Translates to: STHSIPRLHHADNNSIYLMCSLC*SSYLIY
Trigger: ATAAATCAGGTAACTGGACCAACAAAGGGAACACAT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCTTTCATGATTCAGTTTaGGGTCACTGTTCTAGTGAT +
Preference number: 2 (lower is better)
Translates to: STHSIPRLHHADNNSIYLFHDSV*GHCSSD
Trigger: ATCACTAGAACAGTGACCCCAAACTGAATCATGAAA...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR GCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCGAGATGAGGAATATATaGTCATTTGTAAGCGATAAG +
Preference number: 2 (lower is better)
Translates to: STHSIPRLHHADNNSIYLEMRNI*SFVSDK
Trigger: CTTATCGCTTACAAATGAGCATATATTCCTCATCTC...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCTCAAACGGCTCCATaGATGCATAATAGCTTTATA +
Preference number: 2 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPQTAP*MHNSFI
Trigger: TATAAAGCTATTATGCATGCATGGAGCCGTTTGAGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCTTTGGTTTAGTCTACTaGCACCTACATTCTTGTTTA +
Preference number: 2 (lower is better)
Translates to: STHSIPRLHHADNNSIYLFGLVY*HLHSCL
Trigger: TAAACAAGAATGTAGGTGCCAGTAGACTAAACCAAA...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAAACGGCTCCATGCATaGATAATAGCTTTATATGTG +
Preference number: 2 (lower is better)
Translates to: LLHIESGISGSLIYKRPAKRLHA*IIALYV
Trigger: CACATATAAAGCTATTATGCATGCATGGAGCCGTTT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTCCTCAAACGGCTCCATaGATGCATAATAGCTTTATA +
Preference number: 2 (lower is better)
Translates to: PDSILSNVSHNINYCMFSPQTAP*MHNSFI
Trigger: TATAAAGCTATTATGCATGCATGGAGCCGTTTGAGG...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTAATCAAGAAGAGATGTaGGGCCAAAATAACACATGG +
Preference number: 2 (lower is better)
Translates to: PDSILSNVSHNINYCMFSNQEEM*GQNNTW
Trigger: CCATGTGTTATTTTGGCCCCACATCTCTTCTTGATT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR TCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGGTTGGTCCAGTTACCTaGTTTATAATTCTTCCTTAC +
Preference number: 2 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWVGPVT*FIILPY
Trigger: GTAAGGAAGAATTATAAATCAGGTAACTGGACCAAC...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAGATGAGGAATATATaGTCATTTGTAAGCGATAAG +
Preference number: 2 (lower is better)
Translates to: LLHIESGISGSLIYKRPAEMRNI*SFVSDK
Trigger: CTTATCGCTTACAAATGAGCATATATTCCTCATCTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
3UTR-3UTR GCA 90 bp GTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACGAGATGAGGAATATATaGTCATTTGTAAGCGATAAG +
Preference number: 2 (lower is better)
Translates to: VETPSTNLVLKRTFALLNEMRNI*SFVSDK
Trigger: CTTATCGCTTACAAATGAGCATATATTCCTCATCTC...GTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR-3UTR CCA 90 bp CCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACATACCTTCTATCAAGGATATAAATTaGAGCAGGTTTGAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: PSTNLVLKRTFALLNIPSIKDIN*SRFEEK
Trigger: CTTCTCTTCAAACCTGCTCCAATTTATATCCTTGAT...AGAAGGTATGTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR-3UTR CCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTTTGGTTTAGTCTACTaGCACCTACATTCTTGTTTA +
Preference number: 2 (lower is better)
Translates to: PDSILSNVSHNINYCMFSFGLVY*HLHSCL
Trigger: TAAACAAGAATGTAGGTGCCAGTAGACTAAACCAAA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR TCA 72 bp CCATGGGCCCTGACACTCCTAACTGTATTATCACCCTaGGCAAGTTTCCTAACTTTTCTGCTCAACTCACTC +
Preference number: 3 (lower is better)
Translates to: PWALTLLTVLSP*ASFLTFLLNSL
Trigger: GAGTGAGTTGAGCAGAAAAGTTAGGAAACTTGCTCAGGGTGATAATACAGTTAGGAGTGTCAGGGCCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTTTATATGTGTTCCCTTaGTTGGTCCAGTTACCTGAT +
Preference number: 3 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTLYVFP*LVQLPD
Trigger: ATCAGGTAACTGGACCAACAAAGGGAACACATATAA...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGAGGAATTTCATCCCTTaGAACTGGAAAGCGGAAGAC +
Preference number: 3 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVRNFIP*NWKAED
Trigger: GTCTTCCGCTTTCCAGTTCAAAGGGATGAAATTCCT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR GCA 72 bp CTGTCCAATGTTTTGGGTATGAGAAAGATCCAAGGCTaGATCTACCTCATCAAGGATATAAATTGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: LSNVLGMRKIQG*IYLIKDINWSR
Trigger: CCTGCTCCAATTTATATCCTTGATGAGGTAGATGCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR-3UTR CAA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTATGTGTTCCCTTTGTaGGTCCAGTTACCTGATTTA +
Preference number: 3 (lower is better)
Translates to: SDDVPKTVDSILMVFASVYVFPL*VQLPDL
Trigger: TAAATCAGGTAACTGGACCAACAAAGGGAACACATA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CAA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTTATATGTGTTCCCTTaGTTGGTCCAGTTACCTGAT +
Preference number: 3 (lower is better)
Translates to: SDDVPKTVDSILMVFASVLYVFP*LVQLPD
Trigger: ATCAGGTAACTGGACCAACAAAGGGAACACATATAA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCAAACTTCAGATAAATTaGCAGCAGATAGTACCACGC +
Preference number: 3 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSKLQIN*QQIVPR
Trigger: GCGTGGTACTATCTGCTGCAAATTTATCTGAAGTTT...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACCTGGCACCTACATTCTaGTTTACCAATAGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHLAPTF*FTNRLL
Trigger: TAACAACCTATTGGTAAACAAGAATGTAGGTGCCAG...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR TCA 72 bp CATCTACCTCATCAAGGATATAAATTGGAGCAGGTTTaGAGAGAAGCATGGACAGTATTAATGACAAGGCCA +
Preference number: 3 (lower is better)
Translates to: HLPHQGYKLEQV*REAWTVLMTRP
Trigger: TGGCCTTGTCATTAATACTGTCCATGCTTCTCTTCAAACCTGCTCCAATTTATATCCTTGATGAGGTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493955.1
3UTR CCA 72 bp CAGATTACATCATGTCAGACCTTTCATGATTCAGTTTaGGGTCACTGTTCTAGTGATGACGTACCAAAAACT +
Preference number: 3 (lower is better)
Translates to: QITSCQTFHDSV*GHCSSDDVPKT
Trigger: AGTTTTTGGTACGTCATCACTAGAACAGTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTAGGAATTTCATCCCTTaGAACTGGAAAGCGGAAGAC +
Preference number: 3 (lower is better)
Translates to: PDSILSNVSHNINYCMFSRNFIP*NWKAED
Trigger: GTCTTCCGCTTTCCAGTTCAAAGGGATGAAATTCCT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCGAATTGGTAACTGTTTaGGCACAGTCTGTAATACAT +
Preference number: 3 (lower is better)
Translates to: STHSIPRLHHADNNSIYLELVTV*AQSVIH
Trigger: ATGTATTACAGACTGTGCCAAAACAGTTACCAATTC...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGTATGTGTTCCCTTTGTaGGTCCAGTTACCTGATTTA +
Preference number: 3 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWYVFPL*VQLPDL
Trigger: TAAATCAGGTAACTGGACCAACAAAGGGAACACATA...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR GCA 72 bp TCAATCCTTTCCAATGTGTCCCATAATATCAATTACTaGATGTTTTCTGACATCTCATATGTATGGAGAATG +
Preference number: 3 (lower is better)
Translates to: SILSNVSHNINY*MFSDISYVWRM
Trigger: CATTCTCCATACATATGAGATGTCAGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTTTAGAAGCCCGAACCTaGGACAGGTTGGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTLEART*DRLEMP
Trigger: GGGCATCTCCAACCTGTCTCAGGTTCGGGCTTCTAA...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTGGGTCAGCAAACCTCTaGCAGGAATCAAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTGSANL*QESNRP
Trigger: TGGCCTGTTTGATTCCTGTCAGAGGTTTGCTGACCC...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGAGCGGCTACAACACCTaGCACACCGCTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVSGYNT*HTALNT
Trigger: GGTGTTGAGAGCGGTGTGGCAGGTGTTGTAGCCGCT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAGGTCCCTCTGCCACTaGTCCCCCTCCCTACAGCCC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPARSLCH*SPSLQP
Trigger: GGGCTGTAGGGAGGGGGACCAGTGGCAGAGGGACCT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTTTAGGTTCTGGAGACTaGCAAGATTTGTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTLGSGD*QDLSMG
Trigger: GCCCATGGACAAATCTTGTCAGTCTCCAGAACCTAA...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTATATCACGAGACAGCTaGCTGCGCTTTTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTISRDS*LRFSKR
Trigger: CCTTTTGGAAAAGCGCAGGCAGCTGTCTCGTGATAT...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ATGAGTACGCAGCATCTGTCCAATGTTTTGGGTATGAGAAAGATCCAAGGCTGCTTGACCCTCTGGTGGTaGAAGCATAGCATTAGCACC +
Preference number: 4 (lower is better)
Translates to: MSTQHLSNVLGMRKIQGCLTLWW*KHSIST
Trigger: GGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAA...GCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAGATGCTGCGTACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCTCTCCCCTCCACAGTaGACAGAACTAATTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTLSPPQ*TELIPD
Trigger: ATCTGGAATTAGTTCTGTCCACTGTGGAGGGGAGAG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTTAGAAGCCCGAACCTaGGACAGGTTGGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSLEART*DRLEMP
Trigger: GGGCATCTCCAACCTGTCTCAGGTTCGGGCTTCTAA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTATGTCAGACCTTTCATaGTTCAGTTTGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTMSDLS*FSLGSL
Trigger: CAGTGACCCCAAACTGAATCATGAAAGGTCTGACAT...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCCCCGAATTGTGCTTaGCTCCGGGAGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPASPNCA*LREEGK
Trigger: CTTCCCCTCCTCCCGGAGTCAAGCACAATTCGGGGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACACCTAAGGTCCCTCTaGCACTGGTCCCCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAHLRSL*HWSPSL
Trigger: TAGGGAGGGGGACCAGTGGCAGAGGGACCTTAGGTG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS-3UTR CCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCAGCTGAGCGTACTTTaGTATCTTCAGCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTQLSVL*YLQPAK
Trigger: TTTTGCTGGCTGAAGATACCAAAGTACGCTCAGCTG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCAAAATGGAAGCTGCCTaGGATCGAGCACCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVKMEAA*DRAPPL
Trigger: GAGTGGAGGTGCTCGATCCCAGGCAGCTTCCATTTT...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTAATCATAGGCACTATTaGGTTGGCCAAAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTNHRHY*VGQRGV
Trigger: GACACCTCTTTGGCCAACCCAATAGTGCCTATGATT...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCGGGTCAGCAAACCTCTaGCAGGAATCAAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLGSANL*QESNRP
Trigger: TGGCCTGTTTGATTCCTGTCAGAGGTTTGCTGACCC...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACGGGGGTCAAAACCATTaGCTTCGGTCCTCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHGGQNH*LRSSEH
Trigger: ATGCTCAGAGGACCGAAGTCAATGGTTTTGACCCCC...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCAAGGAAAGAGCCACATaGACGTTGTCAGGGCCAACA +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVKERAT*TLSGPT
Trigger: TGTTGGCCCTGACAACGTTCATGTGGCTCTTTCCTT...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCCATCCAAAACAGTTTaGCCCTCTGGTGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLPSKTV*PSGGAS
Trigger: GCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACCCATCCAAAACAGTTTaGCCCTCTGGTGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHPSKTV*PSGGAS
Trigger: GCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGG...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCATATGTATGGAGAATaGAGGGTGGGAAATGTCAAG +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTHMYGE*RVGNVK
Trigger: CTTGACATTTCCCACCCTTCATTCTCCATACATATG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCGAGACAGGTTGGAGATaGCCAGCAAAAAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVETGWR*PAKSRW
Trigger: CCATCTGCTTTTTGCTGGGCATCTCCAACCTGTCTC...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCCACCAATAACCACCTaGCTTGTTACTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTPPITT*LVTVIS
Trigger: TGAAATCACAGTAACAAGGCAGGTGGTTATTGGTGG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCACGAGACAGCTGCCTaGGCTTTTCCAAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVHETAA*AFPKGF
Trigger: AAAGCCTTTTGGAAAAGCGCAGGCAGCTGTCTCGTG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCATCTTCTTGCTAGATaGATCTGCCTTTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTHLLAR*ICLCFG
Trigger: GCCAAAACAAAGGCAGATGCATCTAGCAAGAAGATG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ATGAGTACGCAGCATCTGTCCAATGTTTTGGGTATGAGAAAGATCCAAGGCTGCCATTTTGGATACCTTTaGAGCACCATCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MSTQHLSNVLGMRKIQGCHFGYL*STIFSL
Trigger: GAGGCTGAAGATGGTGCTGCAAAGGTATCCAAAATG...GCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAGATGCTGCGTACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR GCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTGACCCTCTGGTGGTaGAAGCATAGCATTAGCACC +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVLTLWW*KHSIST
Trigger: GGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTTTAAACTTCCACATGTaGTCCTTTGGGTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTLNFHM*SFGWFC
Trigger: GCAAAACCACCCAAAGGAGCACATGTGGAAGTTTAA...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATGCATCCCCGAATTGTaGTTGACTCCGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPACIPEL*LTPGGG
Trigger: CCCTCCTCCCGGAGTCAAGCACAATTCGGGGATGCA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS-3UTR CCA 90 bp ATGAGTACGCAGCATCTGTCCAATGTTTTGGGTATGAGAAAGATCCAAGGCTGCAACAGTTTGACCCTCTaGTGGTGCAAGCATAGCATT +
Preference number: 4 (lower is better)
Translates to: MSTQHLSNVLGMRKIQGCNSLTL*WCKHSI
Trigger: AATGCTATGCTTGCACCACCAGAGGGTCAAACTGTT...GCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAGATGCTGCGTACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTAACTATTTATTCCTTTaGATTTCGGCGCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTNYLFL*ISARAK
Trigger: CTTTGCTCGCGCCGAAATTCAAAGGAATAAATAGTT...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286398.11
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTAGAAGCCCGAACCTaGGACAGGTTGGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALEART*DRLEMP
Trigger: GGGCATCTCCAACCTGTCTCAGGTTCGGGCTTCTAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGGCCACTAAAGACCTCTaGCCACCACTAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVATKDL*PPLSSV
Trigger: AACTGAACTTAGTGGTGGTCAGAGGTCTTTAGTGGC...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTAGCGGCTACAACACCTaGCACACCGCTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSSGYNT*HTALNT
Trigger: GGTGTTGAGAGCGGTGTGGCAGGTGTTGTAGCCGCT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACGAGACAGGTTGGAGATaGCCAGCAAAAAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHETGWR*PAKSRW
Trigger: CCATCTGCTTTTTGCTGGGCATCTCCAACCTGTCTC...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCTCTGGATCCTTGTATaGAAATCGAAGATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTLWILV*KSKIGK
Trigger: TTTCCCAATCTTCGATTTGCATACAAGGATCCAGAG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCTTGACCCTCTGGTGGTaGAAGCATAGCATTAGCACC +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLLTLWW*KHSIST
Trigger: GGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAA...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTATTCCAGTTCTTCTCTaGATCCTTGTATGCAAATCG +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTIPVLL*ILVCKS
Trigger: CGATTTGCATACAAGGATCCAGAGAAGAACTGGAAT...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTGCAATATTTAGGGCTTaGTTTTTCTTCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTAIFRA*FFFWSR
Trigger: CCTTGACCAGAAGAAAAACCAAGCCCTAAATATTGC...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCCCACATGTGCTCCTTTaGGTGGTTTTGCCTTGGATT +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVPHVLL*VVLPWI
Trigger: AATCCAAGGCAAAACCACCCAAAGGAGCACATGTGG...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCTCTCCCCTCCACAGTaGACAGAACTAATTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVLSPPQ*TELIPD
Trigger: ATCTGGAATTAGTTCTGTCCACTGTGGAGGGGAGAG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR CAA 72 bp ATGTGTGAAATGAGTACGCAGCATCTGTCCAATGTTTaGGGTATGAGAAAGATCCAAGGCTGCATCTACCTC +
Preference number: 4 (lower is better)
Translates to: MCEMSTQHLSNV*GMRKIQGCIYL
Trigger: GAGGTAGATGCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAGATGCTGCGTACTCATTTCACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGGGTCAGCAAACCTCTaGCAGGAATCAAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAGSANL*QESNRP
Trigger: TGGCCTGTTTGATTCCTGTCAGAGGTTTGCTGACCC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTAGTATTAACTCGCTaGGCCTCTGCAAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVLVLTR*ASARAS
Trigger: AGATGCTCTTGCAGAGGCTCAGCGAGTTAATACTAA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTAGATCAAATGCGCTTTaGGATTTAGTATTAACTCGC +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTRSNAL*DLVLTR
Trigger: GCGAGTTAATACTAAATCTCAAAGCGCATTTGATCT...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTGCTTCAACTTCATCTaGGCCTGTTTGGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSCFNFI*ACLASV
Trigger: GACAGAAGCCAAACAGGCTCAGATGAAGTTGAAGCA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTTTCTTTAATTCCTGTTaGGCATGCTTCAACTTCATC +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTFFNSC*ACFNFI
Trigger: GATGAAGTTGAAGCATGCTCAACAGGAATTAAAGAA...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCCACTCAATGTCCCATaGGGATCAAACACATCACCT +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLPLNVP*GSNTSP
Trigger: AGGTGATGTGTTTGATCCTCATGGGACATTGAGTGG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCCCACTCAATGTCCCATaGGGATCAAACACATCACCT +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSPLNVP*GSNTSP
Trigger: AGGTGATGTGTTTGATCCTCATGGGACATTGAGTGG...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTTGTTGCTTGTGATATaGGCTTTGCTGGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVLLLVI*ALLELG
Trigger: ACCAAGCTCCAGCAAAGCTCATATCACAAGCAACAA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTCTTCTTGTTGCTTGTaGTATGAGCTTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVSSCCL*YELCWS
Trigger: GCTCCAGCAAAGCTCATATCACAAGCAACAAGAAGA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCATCCAAAACAGTTTaGCCCTCTGGTGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPSKTV*PSGGAS
Trigger: GCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR TCA 90 bp ATCCATGTTAGTTTCCAACACTCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCCATCCAAAACAGTTTaGCCCTCTGGTGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: IHVSFQHSSFLYVDPRFHPSKTV*PSGGAS
Trigger: GCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGG...ATGGAACCTTGGATCTACATAAAGGAAAGAAGAGTGTTGGAAACTAACATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR TCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCTTCCCAAGGCAACCTTaGACTCCAGACCATCCAAAA +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLFPRQP*TPDHPK
Trigger: TTTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAA...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCCTGAGAACTTCCTTCCCAAGGCAACCTTaGACTCCAGACCATCCAAAA +
Preference number: 4 (lower is better)
Translates to: YVDPRFHLVSFSFCLRTSFPRQP*TPDHPK
Trigger: TTTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAA...GGAAGTTCTCAGGCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCGCCACTAAAGACCTCTaGCCACCACTAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSATKDL*PPLSSV
Trigger: AACTGAACTTAGTGGTGGTCAGAGGTCTTTAGTGGC...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCCAATGTTTTGGGTATaGGAAAGATCCAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVPMFWV*ERSKAA
Trigger: TGCAGCCTTGGATCTTTCTCATACCCAAAACATTGG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCATATCACGAGACAGCTaGCTGCGCTTTTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLISRDS*LRFSKR
Trigger: CCTTTTGGAAAAGCGCAGGCAGCTGTCTCGTGATAT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCAGCTGAGCGTACTTTaGTATCTTCAGCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVQLSVL*YLQPAK
Trigger: TTTTGCTGGCTGAAGATACCAAAGTACGCTCAGCTG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAAAATGGAAGCTGCCTaGGATCGAGCACCTCCACTC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAKMEAA*DRAPPL
Trigger: GAGTGGAGGTGCTCGATCCCAGGCAGCTTCCATTTT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp ATGAGTACGCAGCATCTGTCCAATGTTTTGGGTATGAGAAAGATCCAAGGCTGCGCAATATTTAGGGCTTaGTTTTTCTTCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: MSTQHLSNVLGMRKIQGCAIFRA*FFFWSR
Trigger: CCTTGACCAGAAGAAAAACCAAGCCCTAAATATTGC...GCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAGATGCTGCGTACTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGAACAGTTTGACCCTCTaGTGGTGCAAGCATAGCATT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVNSLTL*WCKHSI
Trigger: AATGCTATGCTTGCACCACCAGAGGGTCAAACTGTT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCCACATGTGCTCCTTTaGGTGGTTTTGCCTTGGATT +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLPHVLL*VVLPWI
Trigger: AATCCAAGGCAAAACCACCCAAAGGAGCACATGTGG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTGTATATCTTAGGTTCTaGAGACTGACAAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTVYLRF*RLTRFV
Trigger: GACAAATCTTGTCAGTCTCCAGAACCTAAGATATAC...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCCCTGCCTTGTTACTGTaGTTTCATCATGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVPALLL*FHHEPQ
Trigger: TTGAGGTTCATGATGAAATCACAGTAACAAGGCAGG...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAAGGAAAGAGCCACATaGACGTTGTCAGGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAKERAT*TLSGPT
Trigger: TGTTGGCCCTGACAACGTTCATGTGGCTCTTTCCTT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTTGGTCACCTCTTCTTaGGCTTTATTTACTGACTCC +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVLVTSS*ALFTDS
Trigger: GGAGTCAGTAAATAAAGCTCAAGAAGAGGTGACCAA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCCCGTTTATGTTTGCTaGTGTTGTGGTCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVPVYVC*CCGLIP
Trigger: AGGAATTAGACCACAACATCAGCAAACATAAACGGG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCCAATGTTTTGGGTATaGGAAAGATCCAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLPMFWV*ERSKAA
Trigger: TGCAGCCTTGGATCTTTCTCATACCCAAAACATTGG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAGACAGGTTGGAGATaGCCAGCAAAAAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAETGWR*PAKSRW
Trigger: CCATCTGCTTTTTGCTGGGCATCTCCAACCTGTCTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAAACAGCATTGAAGTaGTGCTGTGCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAETALK*CCAAAR
Trigger: TCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACACGAGACAGCTGCCTaGGCTTTTCCAAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAHETAA*AFPKGF
Trigger: AAAGCCTTTTGGAAAAGCGCAGGCAGCTGTCTCGTG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCTTGCTAGATGCATCTaGCTTTGTTTTGGCACAATC +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVLARCI*LCFGTI
Trigger: GATTGTGCCAAAACAAAGGCAGATGCATCTAGCAAG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCATTTTGGATACCTTTaGAGCACCATCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLHFGYL*STIFSL
Trigger: GAGGCTGAAGATGGTGCTGCAAAGGTATCCAAAATG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTGACCCTCTGGTGGTaGAAGCATAGCATTAGCACC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALTLWW*KHSIST
Trigger: GGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR GCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGAGAAAGATCCAAGGCTaGATCTACCTCATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVRKIQG*IYLIKD
Trigger: ATCCTTGATGAGGTAGATGCAGCCTTGGATCTTTCT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTAAACTTCCACATGTaGTCCTTTGGGTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVLNFHM*SFGWFC
Trigger: GCAAAACCACCCAAAGGAGCACATGTGGAAGTTTAA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAACCTACGTCCGTCATTaGATCCCCGAATTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPATYVRH*IPELCL
Trigger: CAAGCACAATTCGGGGATGCAATGACGGACGTAGGT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAACCTGAGACAGGTTaGAGATGCCCAGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAEPETG*RCPAKS
Trigger: GCTTTTTGCTGGGCATCTCCAACCTGTCTCAGGTTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACTCCATCTTCATTACTaGACAGGCCAGCGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALHLHY*TGQRKQ
Trigger: CTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGGAG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCGAAACTTGGTTAAAATaGAAGCTGCCTGGGATCGAG +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSETWLK*KLPGIE
Trigger: CTCGATCCCAGGCAGCTTCCATTTTAACCAAGTTTC...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACAACAGTTTGACCCTCTaGTGGTGCAAGCATAGCATT +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHNSLTL*WCKHSI
Trigger: AATGCTATGCTTGCACCACCAGAGGGTCAAACTGTT...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCATGTGCTCCTTTGGGTaGTTTTGCCTTGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLMCSFG*FCLGFC
Trigger: GCAAAATCCAAGGCAAAACCACCCAAAGGAGCACAT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATGGAGAATGAAGGGTaGGAAATGTCAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAMENEG*EMSSPG
Trigger: CCCTGGGCTTGACATTTCCCACCCTTCATTCTCCAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCCCTGCCTTGTTACTGTaGTTTCATCATGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSPALLL*FHHEPQ
Trigger: TTGAGGTTCATGATGAAATCACAGTAACAAGGCAGG...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTGCATGATGAGAAAGTaGGGGTTGTTAACATTAAGG +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVCMMRK*GLLTLR
Trigger: CCTTAATGTTAACAACCCTCACTTTCTCATCATGCA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCCAGATTTTTCTTCTTaGGATCAAATGCGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVPDFSS*DQMRFE
Trigger: CTCAAAGCGCATTTGATCTCAAGAAGAAAAATCTGG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTTATTACTTGCTTCTTaGAGGGCATGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHLLLAS*RACSPS
Trigger: AGATGGACTGCATGCCCTTCAAGAAGCAAGTAATAA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATGCTTCAACTTCATCTaGGCCTGTTTGGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPACFNFI*ACLASV
Trigger: GACAGAAGCCAAACAGGCTCAGATGAAGTTGAAGCA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGGGCCAACAAGATTCTaGGCAACTCTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAGPTRF*ATLRVS
Trigger: AGAAACTCTGAGAGTTGCTCAGAATCTTGTTGGCCC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGAAGGAAAGAGCCACATaGACGTTGTCAGGGCCAACA +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWKERAT*TLSGPT
Trigger: TGTTGGCCCTGACAACGTTCATGTGGCTCTTTCCTT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCACTCAATGTCCCATaGGGATCAAACACATCACCT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPLNVP*GSNTSP
Trigger: AGGTGATGTGTTTGATCCTCATGGGACATTGAGTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTTGGTCACCTCTTCTTaGGCTTTATTTACTGACTCC +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHLVTSS*ALFTDS
Trigger: GGAGTCAGTAAATAAAGCTCAAGAAGAGGTGACCAA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTCCCAAGGCAACCTTaGACTCCAGACCATCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFPRQP*TPDHPK
Trigger: TTTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGCCACTAAAGACCTCTaGCCACCACTAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAATKDL*PPLSSV
Trigger: AACTGAACTTAGTGGTGGTCAGAGGTCTTTAGTGGC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCAAATTGGAGCAGGTTTaGAGAGAAGCATGGACAGTA +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSKLEQV*REAWTV
Trigger: TACTGTCCATGCTTCTCTTCAAACCTGCTCCAATTT...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCAAATTGGAGCAGGTTTaGAGAGAAGCATGGACAGTA +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLKLEQV*REAWTV
Trigger: TACTGTCCATGCTTCTCTTCAAACCTGCTCCAATTT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp GCTACTGTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGCCAATGTTTTGGGTATaGGAAAGATCCAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ATVETPSTNLVLKRTFALPMFWV*ERSKAA
Trigger: TGCAGCCTTGGATCTTTCTCATACCCAAAACATTGG...CAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTACAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCATTACTGCAGATGTGTaGAACAAATGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSITADV*NKCPQS
Trigger: GGATTGGGGACATTTGTTTCACACATCTGCAGTAAT...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTCGATTACACCATGCTaGCAACAACAGTATTTACCT +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVSITPC*QQQYLP
Trigger: AGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTAGGTTCTGGAGACTaGCAAGATTTGTCCATGGGC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALGSGD*QDLSMG
Trigger: GCCCATGGACAAATCTTGTCAGTCTCCAGAACCTAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCAGCTCTTTGCGTTTaGTTTCCTCACATGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPALCV*FPHMPD
Trigger: ATCTGGCATGTGAGGAAAGCAAACGCAAAGAGCTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTGAAACAGCATTGAAGTaGTGCTGTGCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSETALK*CCAAAR
Trigger: TCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTC...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTTGACCAGCAAGAGTTaGTTCTGCTCCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHLTSKS*FCSIFI
Trigger: AATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATATCACGAGACAGCTaGCTGCGCTTTTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAISRDS*LRFSKR
Trigger: CCTTTTGGAAAAGCGCAGGCAGCTGTCTCGTGATAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCGTTTTCATCTCCCACTaGTGTTTTAGTTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSVFISH*CFSWRY
Trigger: GTATCGCCAACTAAAACAGCAGTGGGAGATGAAAAC...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTTTAGCCACCTCAGCTaGCATTACTTCAATCTGACT +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHFSHLS*HYFNLT
Trigger: AGTCAGATTGAAGTAATGGCAGCTGAGGTGGCTAAA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTCCTTGTTCACCTTTTaGCATGCAATATTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVSLFTF*HAIFRA
Trigger: AGCCCTAAATATTGCATGGCAAAAGGTGAACAAGGA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACAGAAAGATCCAAGGCTaGATCTACCTCATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHRKIQG*IYLIKD
Trigger: ATCCTTGATGAGGTAGATGCAGCCTTGGATCTTTCT...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCCTCAAACGGCTCCATaGATGCATAATAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVPQTAP*MHNSFI
Trigger: TATAAAGCTATTATGCATGCATGGAGCCGTTTGAGG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCCAGCAAAAAGCAGATaGAGTCCAATATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVPAKSR*SPICWI
Trigger: AATCCAACATATTGGACTCCATCTGCTTTTTGCTGG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCCCAGCAAAAAGCAGATaGAGTCCAATATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVPAKSR*SPICWI
Trigger: AATCCAACATATTGGACTCCATCTGCTTTTTGCTGG...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTGAACCTGAGACAGGTTaGAGATGCCCAGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSEPETG*RCPAKS
Trigger: GCTTTTTGCTGGGCATCTCCAACCTGTCTCAGGTTC...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTGTATTCATACATCCTaGTTCCAGCTGCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVCIHTS*FQLLLL
Trigger: TAGAAGAAGCAGCTGGAACCAGGATGTATGAATACA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGCTCCATCTTCATTACTaGACAGGCCAGCGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWLHLHY*TGQRKQ
Trigger: CTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGGAG...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGATTCCAGTTCTTCTCTaGATCCTTGTATGCAAATCG +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVIPVLL*ILVCKS
Trigger: CGATTTGCATACAAGGATCCAGAGAAGAACTGGAAT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCACTGCTGTTTTAGTTaGCGATACTTTTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLHCCFS*RYFSAV
Trigger: CACTGCTGAAAAGTATCGCCAACTAAAACAGCAGTG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAGTTTGACCCTCTGGTaGTGCAAGCATAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPASLTLW*CKHSIS
Trigger: GCTAATGCTATGCTTGCACCACCAGAGGGTCAAACT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp TCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCAGTTTGACCCTCTGGTaGTGCAAGCATAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: SSFLYVDPRFHLVSFSFCSLTLW*CKHSIS
Trigger: GCTAATGCTATGCTTGCACCACCAGAGGGTCAAACT...GCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCACATGTGCTCCTTTaGGTGGTTTTGCCTTGGATT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPHVLL*VVLPWI
Trigger: AATCCAAGGCAAAACCACCCAAAGGAGCACATGTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGGACATCTCATATGTATaGAGAATGAAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVDISYV*RMKGGK
Trigger: TTTCCCACCCTTCATTCTCCATACATATGAGATGTC...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCACTGTGATTTCATCATaGACCTCAAATCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVTVISS*TSNPKG
Trigger: TCCTTTAGGATTTGAGGTTCATGATGAAATCACAGT...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTGCATGATGAGAAAGTaGGGGTTGTTAACATTAAGG +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHCMMRK*GLLTLR
Trigger: CCTTAATGTTAACAACCCTCACTTTCTCATCATGCA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTAGTATTAACTCGCTaGGCCTCTGCAAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALVLTR*ASARAS
Trigger: AGATGCTCTTGCAGAGGCTCAGCGAGTTAATACTAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACCCAGATTTTTCTTCTTaGGATCAAATGCGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHPDFSS*DQMRFE
Trigger: CTCAAAGCGCATTTGATCTCAAGAAGAAAAATCTGG...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTACAGGCCATCATTTaGCCAGCAAGAGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALQAII*PARVAS
Trigger: AGAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGTGCTTCAACTTCATCTaGGCCTGTTTGGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWCFNFI*ACLASV
Trigger: GACAGAAGCCAAACAGGCTCAGATGAAGTTGAAGCA...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGGGGCCAACAAGATTCTaGGCAACTCTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWGPTRF*ATLRVS
Trigger: AGAAACTCTGAGAGTTGCTCAGAATCTTGTTGGCCC...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTGTTGCTTGTGATATaGGCTTTGCTGGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALLLVI*ALLELG
Trigger: ACCAAGCTCCAGCAAAGCTCATATCACAAGCAACAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCTTCTTGTTGCTTGTaGTATGAGCTTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPASSCCL*YELCWS
Trigger: GCTCCAGCAAAGCTCATATCACAAGCAACAAGAAGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGTTCCCAAGGCAACCTTaGACTCCAGACCATCCAAAA +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWFPRQP*TPDHPK
Trigger: TTTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAA...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CCAACACTCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCAAATTGGAGCAGGTTTaGAGAGAAGCATGGACAGTA +
Preference number: 4 (lower is better)
Translates to: PTLFFPLCRSKVPSGIIFKLEQV*REAWTV
Trigger: TACTGTCCATGCTTCTCTTCAAACCTGCTCCAATTT...GAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGAGTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCAATGTTTTGGGTATaGGAAAGATCCAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPMFWV*ERSKAA
Trigger: TGCAGCCTTGGATCTTTCTCATACCCAAAACATTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR TCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCCACAAACTTGGTTTTaGAAAGAACGTTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVPQTWF*KERLHC
Trigger: ACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGGTTGGTCCAGTTACCTaGTTTATAATTCTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVVGPVT*FIILPY
Trigger: GTAAGGAAGAATTATAAATCAGGTAACTGGACCAAC...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATGTCAGACCTTTCATaGTTCAGTTTGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAMSDLS*FSLGSL
Trigger: CAGTGACCCCAAACTGAATCATGAAAGGTCTGACAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTCGATTACACCATGCTaGCAACAACAGTATTTACCT +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSSITPC*QQQYLP
Trigger: AGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CCAACACTCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCTGCTGTTTTTGTCTCTaGCCACCACTAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PTLFFPLCRSKVPSGIIFCCFCL*PPLSSV
Trigger: AACTGAACTTAGTGGTGGTCAGAGACAAAAACAGCA...GAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGAGTGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR GCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGCCAGCTCTTTGCGTTTaGTTTCCTCACATGCCAGAT +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWPALCV*FPHMPD
Trigger: ATCTGGCATGTGAGGAAAGCAAACGCAAAGAGCTGG...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCAGCATCTTTATTACTTaGTTCTTGAAGGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLSIFIT*FLKGMQ
Trigger: CTGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACATTTTGGATACCTTTaGAGCACCATCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAHFGYL*STIFSL
Trigger: GAGGCTGAAGATGGTGCTGCAAAGGTATCCAAAATG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR GCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGAAAGAGGTGTCTCTCTaGATTAATCCAGTCATAATC +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVKEVSL*INPVII
Trigger: GATTATGACTGGATTAATGCAGAGAGACACCTCTTT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTCCTTGTTCACCTTTTaGCATGCAATATTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHSLFTF*HAIFRA
Trigger: AGCCCTAAATATTGCATGGCAAAAGGTGAACAAGGA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACCCTCAAACGGCTCCATaGATGCATAATAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHPQTAP*MHNSFI
Trigger: TATAAAGCTATTATGCATGCATGGAGCCGTTTGAGG...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCTGCTTCTTCTATCATaGATAAAATCTCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVLLLLS*IKSLEV
Trigger: AACCTCCAGAGATTTTATCCATGATAGAAGAAGCAG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTGTATTCATACATCCTaGTTCCAGCTGCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHCIHTS*FQLLLL
Trigger: TAGAAGAAGCAGCTGGAACCAGGATGTATGAATACA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACAGCTGAGCGTACTTTaGTATCTTCAGCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAQLSVL*YLQPAK
Trigger: TTTTGCTGGCTGAAGATACCAAAGTACGCTCAGCTG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCGAAGATTGGGAAATCTaGCTAATAGAGCTTCATATG +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVEDWEI*LIELHM
Trigger: CATATGAAGCTCTATTAGCCAGATTTCCCAATCTTC...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAAACTTGGTTAAAATaGAAGCTGCCTGGGATCGAG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAETWLK*KLPGIE
Trigger: CTCGATCCCAGGCAGCTTCCATTTTAACCAAGTTTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCAGCTTTGCTGGAGCTTaGTTTGTAATAAATCTGCCT +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLSFAGA*FVINLP
Trigger: AGGCAGATTTATTACAAACCAAGCTCCAGCAAAGCT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAATCATAGGCACTATTaGGTTGGCCAAAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPANHRHY*VGQRGV
Trigger: GACACCTCTTTGGCCAACCCAATAGTGCCTATGATT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp GCTGATTTTCTGAATCACTGTGTAAGGTCAGGAGAAACTTCCCTGAACTCCAAAGCTTGGTTTTTCTTCTaGTCAAGGTCTTCTATAGTT +
Preference number: 4 (lower is better)
Translates to: ADFLNHCVRSGETSLNSKAWFFF*SRSSIV
Trigger: AACTATAGAAGACCTTGACCAGAAGAAAAACCAAGC...TTTGGAGTTCAGGGAAGTTTCTCCTGACCTTACACAGTGATTCAGAAAATCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGAGTTTGACCCTCTGGTaGTGCAAGCATAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWSLTLW*CKHSIS
Trigger: GCTAATGCTATGCTTGCACCACCAGAGGGTCAAACT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAACAGTTTGACCCTCTaGTGGTGCAAGCATAGCATT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPANSLTL*WCKHSI
Trigger: AATGCTATGCTTGCACCACCAGAGGGTCAAACTGTT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTGGGTGGTTTTGCCTTaGATTTTGCTTCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSWVVLP*ILLPLK
Trigger: TTTCAAAGGAAGCAAAATCCAAGGCAAAACCACCCA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCTGGGTGGTTTTGCCTTaGATTTTGCTTCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLWVVLP*ILLPLK
Trigger: TTTCAAAGGAAGCAAAATCCAAGGCAAAACCACCCA...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATGTGCTCCTTTGGGTaGTTTTGCCTTGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAMCSFG*FCLGFC
Trigger: GCAAAATCCAAGGCAAAACCACCCAAAGGAGCACAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp TCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCATGTGCTCCTTTGGGTaGTTTTGCCTTGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: SSFLYVDPRFHLVSFSFCMCSFG*FCLGFC
Trigger: GCAAAATCCAAGGCAAAACCACCCAAAGGAGCACAT...GCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTTCATGATTCAGTTTaGGGTCACTGTTCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVFHDSV*GHCSSD
Trigger: ATCACTAGAACAGTGACCCCAAACTGAATCATGAAA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTTTCATGATTCAGTTTaGGGTCACTGTTCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVFHDSV*GHCSSD
Trigger: ATCACTAGAACAGTGACCCCAAACTGAATCATGAAA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCGACATCTCATATGTATaGAGAATGAAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSDISYV*RMKGGK
Trigger: TTTCCCACCCTTCATTCTCCATACATATGAGATGTC...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCACTGTGATTTCATCATaGACCTCAAATCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLTVISS*TSNPKG
Trigger: TCCTTTAGGATTTGAGGTTCATGATGAAATCACAGT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCTGCCTTGTTACTGTaGTTTCATCATGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPALLL*FHHEPQ
Trigger: TTGAGGTTCATGATGAAATCACAGTAACAAGGCAGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACAGATCAAATGCGCTTTaGGATTTAGTATTAACTCGC +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHRSNAL*DLVLTR
Trigger: GCGAGTTAATACTAAATCTCAAAGCGCATTTGATCT...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTATTACTTGCTTCTTaGAGGGCATGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALLLAS*RACSPS
Trigger: AGATGGACTGCATGCCCTTCAAGAAGCAAGTAATAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGTTACAGGCCATCATTTaGCCAGCAAGAGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWLQAII*PARVAS
Trigger: AGAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAA...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTGGTCACCTCTTCTTaGGCTTTATTTACTGACTCC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALVTSS*ALFTDS
Trigger: GGAGTCAGTAAATAAAGCTCAAGAAGAGGTGACCAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCCGTTTATGTTTGCTaGTGTTGTGGTCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPVYVC*CCGLIP
Trigger: AGGAATTAGACCACAACATCAGCAAACATAAACGGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR TCA 90 bp TCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCCCCGTTTATGTTTGCTaGTGTTGTGGTCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: SSFLYVDPRFHLVSFSFCPVYVC*CCGLIP
Trigger: AGGAATTAGACCACAACATCAGCAAACATAAACGGG...GCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAAATTGGAGCAGGTTTaGAGAGAAGCATGGACAGTA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAKLEQV*REAWTV
Trigger: TACTGTCCATGCTTCTCTTCAAACCTGCTCCAATTT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR TCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGGGAATTTCATCCCTTTaGACTGGAAAGCGGAAGACA +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWGISSL*TGKRKT
Trigger: TGTCTTCCGCTTTCCAGTTCAAAGGGATGAAATTCC...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACACTGTATTATCACCCTaGGCAAGTTTCCTAACTTTT +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHTVLSP*ASFLTF
Trigger: AAAAGTTAGGAAACTTGCTCAGGGTGATAATACAGT...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCACCAATAACCACCTaGCTTGTTACTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPPITT*LVTVIS
Trigger: TGAAATCACAGTAACAAGGCAGGTGGTTATTGGTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTGACCAGCAAGAGTTaGTTCTGCTCCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALTSKS*FCSIFI
Trigger: AATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGTTTTCATCTCCCACTaGTGTTTTAGTTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAVFISH*CFSWRY
Trigger: GTATCGCCAACTAAAACAGCAGTGGGAGATGAAAAC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACTTGCTAGATGCATCTaGCTTTGTTTTGGCACAATC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALARCI*LCFGTI
Trigger: GATTGTGCCAAAACAAAGGCAGATGCATCTAGCAAG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACATCTTCTTGCTAGATaGATCTGCCTTTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAHLLAR*ICLCFG
Trigger: GCCAAAACAAAGGCAGATGCATCTAGCAAGAAGATG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTTAGCCACCTCAGCTaGCATTACTTCAATCTGACT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFSHLS*HYFNLT
Trigger: AGTCAGATTGAAGTAATGGCAGCTGAGGTGGCTAAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTCATTTTGGATACCTTTaGAGCACCATCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSHFGYL*STIFSL
Trigger: GAGGCTGAAGATGGTGCTGCAAAGGTATCCAAAATG...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAGAAAGATCCAAGGCTaGATCTACCTCATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPARKIQG*IYLIKD
Trigger: ATCCTTGATGAGGTAGATGCAGCCTTGGATCTTTCT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR GCA 90 bp GTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACTTAAACTTCCACATGTaGTCCTTTGGGTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: VETPSTNLVLKRTFALLNLNFHM*SFGWFC
Trigger: GCAAAACCACCCAAAGGAGCACATGTGGAAGTTTAA...GTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR GCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCGAGATGAGGAATATATaGTCATTTGTAAGCGATAAG +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVEMRNI*SFVSDK
Trigger: CTTATCGCTTACAAATGAGCATATATTCCTCATCTC...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCAAACGGCTCCATGCATaGATAATAGCTTTATATGTG +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLKRLHA*IIALYV
Trigger: CACATATAAAGCTATTATGCATGCATGGAGCCGTTT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCTGCTTCTTCTATCATaGATAAAATCTCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLLLLLS*IKSLEV
Trigger: AACCTCCAGAGATTTTATCCATGATAGAAGAAGCAG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCATGCAAATCGAAGATTaGGAAATCTGGCTAATAGAG +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSMQIED*EIWLIE
Trigger: CTCTATTAGCCAGATTTCCCAATCTTCGATTTGCAT...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACACTGCTGTTTTAGTTaGCGATACTTTTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAHCCFS*RYFSAV
Trigger: CACTGCTGAAAAGTATCGCCAACTAAAACAGCAGTG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTTAATTACAGTGTCTTaGGCTGTTATCACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SDDVPKTVDSILMVFASVLITVS*AVITSF
Trigger: AAAAGAGGTGATAACAGCCCAAGACACTGTAATTAA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGAATCTTTCAACATTTTaGATACCTTTGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVNLSTF*IPLQHH
Trigger: ATGGTGCTGCAAAGGTATCCAAAATGTTGAAAGATT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGAATCATAGGCACTATTaGGTTGGCCAAAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWNHRHY*VGQRGV
Trigger: GACACCTCTTTGGCCAACCCAATAGTGCCTATGATT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCGCTTGGTTTTTCTTCTaGTCAAGGTCTTCTATAGTT +
Preference number: 4 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSAWFFF*SRSSIV
Trigger: AACTATAGAAGACCTTGACCAGAAGAAAAACCAAGC...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTATGTGCTCCTTTGGGTaGTTTTGCCTTGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSMCSFG*FCLGFC
Trigger: GCAAAATCCAAGGCAAAACCACCCAAAGGAGCACAT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCGTATATCTTAGGTTCTaGAGACTGACAAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLVYLRF*RLTRFV
Trigger: GACAAATCTTGTCAGTCTCCAGAACCTAAGATATAC...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATGCATGATGAGAAAGTaGGGGTTGTTAACATTAAGG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPACMMRK*GLLTLR
Trigger: CCTTAATGTTAACAACCCTCACTTTCTCATCATGCA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCAGATTTTTCTTCTTaGGATCAAATGCGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPDFSS*DQMRFE
Trigger: CTCAAAGCGCATTTGATCTCAAGAAGAAAAATCTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTTATTACTTGCTTCTTaGAGGGCATGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSLLLAS*RACSPS
Trigger: AGATGGACTGCATGCCCTTCAAGAAGCAAGTAATAA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTCCCGTTTATGTTTGCTaGTGTTGTGGTCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSPVYVC*CCGLIP
Trigger: AGGAATTAGACCACAACATCAGCAAACATAAACGGG...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp GCTACTGTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGCCACAAACTTGGTTTTaGAAAGAACGTTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: ATVETPSTNLVLKRTFALPQTWF*KERLHC
Trigger: ACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGG...CAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTACAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR TCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGATTACTGCAGATGTGTaGAACAAATGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWITADV*NKCPQS
Trigger: GGATTGGGGACATTTGTTTCACACATCTGCAGTAAT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTCCACCAATAACCACCTaGCTTGTTACTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSPPITT*LVTVIS
Trigger: TGAAATCACAGTAACAAGGCAGGTGGTTATTGGTGG...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAGCATCTTTATTACTTaGTTCTTGAAGGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPASIFIT*FLKGMQ
Trigger: CTGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTTGACCAGCAAGAGTTaGTTCTGCTCCATCTTCATT +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSLTSKS*FCSIFI
Trigger: AATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACTCTGGATCCTTGTATaGAAATCGAAGATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALWILV*KSKIGK
Trigger: TTTCCCAATCTTCGATTTGCATACAAGGATCCAGAG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTGTTTTCATCTCCCACTaGTGTTTTAGTTGGCGATAC +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSVFISH*CFSWRY
Trigger: GTATCGCCAACTAAAACAGCAGTGGGAGATGAAAAC...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTCTTGCTAGATGCATCTaGCTTTGTTTTGGCACAATC +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSLARCI*LCFGTI
Trigger: GATTGTGCCAAAACAAAGGCAGATGCATCTAGCAAG...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCCTTGTTCACCTTTTaGCATGCAATATTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPASLFTF*HAIFRA
Trigger: AGCCCTAAATATTGCATGGCAAAAGGTGAACAAGGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR GCA 90 bp TTGGGTATGAGAAAGATCCAAGGCTGCATCTACCTCATCAAGGATATAAATTGGGAGATGAGGAATATATaGTCATTTGTAAGCGATAAG +
Preference number: 4 (lower is better)
Translates to: LGMRKIQGCIYLIKDINWEMRNI*SFVSDK
Trigger: CTTATCGCTTACAAATGAGCATATATTCCTCATCTC...CCAATTTATATCCTTGATGAGGTAGATGCAGCCTTGGATCTTTCTCATACCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCAGCAAAAAGCAGATaGAGTCCAATATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPAKSR*SPICWI
Trigger: AATCCAACATATTGGACTCCATCTGCTTTTTGCTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATGTATTCATACATCCTaGTTCCAGCTGCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPACIHTS*FQLLLL
Trigger: TAGAAGAAGCAGCTGGAACCAGGATGTATGAATACA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATTCCAGTTCTTCTCTaGATCCTTGTATGCAAATCG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAIPVLL*ILVCKS
Trigger: CGATTTGCATACAAGGATCCAGAGAAGAACTGGAAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAGCTTTGCTGGAGCTTaGTTTGTAATAAATCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPASFAGA*FVINLP
Trigger: AGGCAGATTTATTACAAACCAAGCTCCAGCAAAGCT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGCAATATTTAGGGCTTaGTTTTTCTTCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAAIFRA*FFFWSR
Trigger: CCTTGACCAGAAGAAAAACCAAGCCCTAAATATTGC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCATCAAGGATATAAATTaGAGCAGGTTTGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: STHSIPRLHHADNNSIYLIKDIN*SRFEEK
Trigger: CTTCTCTTCAAACCTGCTCCAATTTATATCCTTGAT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATGGGTGGTTTTGCCTTaGATTTTGCTTCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAWVVLP*ILLPLK
Trigger: TTTCAAAGGAAGCAAAATCCAAGGCAAAACCACCCA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp GTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACTGGGTGGTTTTGCCTTaGATTTTGCTTCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VETPSTNLVLKRTFALLNWVVLP*ILLPLK
Trigger: TTTCAAAGGAAGCAAAATCCAAGGCAAAACCACCCA...GTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CCA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTTTGGTTTAGTCTACTaGCACCTACATTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHFGLVY*HLHSCL
Trigger: TAAACAAGAATGTAGGTGCCAGTAGACTAAACCAAA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAATCAAGAAGAGATGTaGGGCCAAAATAACACATGG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPANQEEM*GQNNTW
Trigger: CCATGTGTTATTTTGGCCCCACATCTCTTCTTGATT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAACTGTGATTTCATCATaGACCTCAAATCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPATVISS*TSNPKG
Trigger: TCCTTTAGGATTTGAGGTTCATGATGAAATCACAGT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAGATCAAATGCGCTTTaGGATTTAGTATTAACTCGC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPARSNAL*DLVLTR
Trigger: GCGAGTTAATACTAAATCTCAAAGCGCATTTGATCT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTCTTTAATTCCTGTTaGGCATGCTTCAACTTCATC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFFNSC*ACFNFI
Trigger: GATGAAGTTGAAGCATGCTCAACAGGAATTAAAGAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR TCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCACAAACTTGGTTTTaGAAAGAACGTTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPQTWF*KERLHC
Trigger: ACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR GCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGAGCATCTTTATTACTTaGTTCTTGAAGGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWSIFIT*FLKGMQ
Trigger: CTGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTCTCTGGATCCTTGTATaGAAATCGAAGATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSLWILV*KSKIGK
Trigger: TTTCCCAATCTTCGATTTGCATACAAGGATCCAGAG...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAAAGAGGTGTCTCTCTaGATTAATCCAGTCATAATC +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAKEVSL*INPVII
Trigger: GATTATGACTGGATTAATGCAGAGAGACACCTCTTT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR GCA 90 bp GTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACAAAGAGGTGTCTCTCTaGATTAATCCAGTCATAATC +
Preference number: 4 (lower is better)
Translates to: VETPSTNLVLKRTFALLNKEVSL*INPVII
Trigger: GATTATGACTGGATTAATGCAGAGAGACACCTCTTT...GTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACTGCTTCTTCTATCATaGATAAAATCTCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALLLLS*IKSLEV
Trigger: AACCTCCAGAGATTTTATCCATGATAGAAGAAGCAG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAAGATTGGGAAATCTaGCTAATAGAGCTTCATATG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAEDWEI*LIELHM
Trigger: CATATGAAGCTCTATTAGCCAGATTTCCCAATCTTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATGCAAATCGAAGATTaGGAAATCTGGCTAATAGAG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAMQIED*EIWLIE
Trigger: CTCTATTAGCCAGATTTCCCAATCTTCGATTTGCAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGCTTGGTTTTTCTTCTaGTCAAGGTCTTCTATAGTT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAAWFFF*SRSSIV
Trigger: AACTATAGAAGACCTTGACCAGAAGAAAAACCAAGC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR TCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTACTGTATTATCACCCTaGGCAAGTTTCCTAACTTTT +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSTVLSP*ASFLTF
Trigger: AAAAGTTAGGAAACTTGCTCAGGGTGATAATACAGT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAAAGACAAACTCCATTaGTTTCTGAAGTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAKDKLH*FLKFWF
Trigger: AAACCAGAACTTCAGAAAGCAATGGAGTTTGTCTTT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR GCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGAAAGAGGTGTCTCTCTaGATTAATCCAGTCATAATC +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWKEVSL*INPVII
Trigger: GATTATGACTGGATTAATGCAGAGAGACACCTCTTT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGAAACGGCTCCATGCATaGATAATAGCTTTATATGTG +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWKRLHA*IIALYV
Trigger: CACATATAAAGCTATTATGCATGCATGGAGCCGTTT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGGAAGATTGGGAAATCTaGCTAATAGAGCTTCATATG +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWEDWEI*LIELHM
Trigger: CATATGAAGCTCTATTAGCCAGATTTCCCAATCTTC...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGATGCAAATCGAAGATTaGGAAATCTGGCTAATAGAG +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWMQIED*EIWLIE
Trigger: CTCTATTAGCCAGATTTCCCAATCTTCGATTTGCAT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTAATTACAGTGTCTTaGGCTGTTATCACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPALITVS*AVITSF
Trigger: AAAAGAGGTGATAACAGCCCAAGACACTGTAATTAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAATCTTTCAACATTTTaGATACCTTTGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPANLSTF*IPLQHH
Trigger: ATGGTGCTGCAAAGGTATCCAAAATGTTGAAAGATT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATCAAGGATATAAATTaGAGCAGGTTTGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLHIESGISGSLIYKRPAIKDIN*SRFEEK
Trigger: CTTCTCTTCAAACCTGCTCCAATTTATATCCTTGAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTATGTGTTCCCTTTGTTaGTCCAGTTACCTGATTTAT +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSMCSLC*SSYLIY
Trigger: ATAAATCAGGTAACTGGACCAACAAAGGGAACACAT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
3UTR CAA 72 bp GTAAATCTGGCTACTGTAGAAACACCATCCACAAACTaGGTTTTGAAAAGAACGTTTGCATTGTTGAACATA +
Preference number: 4 (lower is better)
Translates to: VNLATVETPSTN*VLKRTFALLNI
Trigger: TATGTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTACAGTAGCCAGATTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR GCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGAAAGACAAACTCCATTaGTTTCTGAAGTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWKDKLH*FLKFWF
Trigger: AAACCAGAACTTCAGAAAGCAATGGAGTTTGTCTTT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR GCA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGGAGATGAGGAATATATaGTCATTTGTAAGCGATAAG +
Preference number: 4 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWEMRNI*SFVSDK
Trigger: CTTATCGCTTACAAATGAGCATATATTCCTCATCTC...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTTAATTACAGTGTCTTaGGCTGTTATCACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSLITVS*AVITSF
Trigger: AAAAGAGGTGATAACAGCCCAAGACACTGTAATTAA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CCA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTATCAAGGATATAAATTaGAGCAGGTTTGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PDSILSNVSHNINYCMFSIKDIN*SRFEEK
Trigger: CTTCTCTTCAAACCTGCTCCAATTTATATCCTTGAT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS GCA 90 bp CCGGGGCCGCTACAAAGCGAACTTCACCATAGCGGCTACAACACCTaGCACACCGCTCTCAACACCCGCGCCGGAACTATTTATTCCTTT +
Preference number: 5 (lower is better)
Translates to: PGPLQSELHHSGYNT*HTALNTRAGTIYSF
Trigger: AAAGGAATAAATAGTTCCGGCGCGGGTGTTGAGAGCGGTGTGGCAGGTGTTGTAGCCGCTATGGTGAAGTTCGCTTTGTAGCGGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374793.8
ENST00000440179.5
CDS TCA 90 bp CTGCCACACCGCTCTCAACACCCGCGCCGGAACTATTTATTCCTTTaGATTTCGGCGCGAGCAAAGGACCCCACCTCCATTGCTTATTTC +
Preference number: 5 (lower is better)
Translates to: LPHRSQHPRRNYLFL*ISARAKDPTSIAYF
Trigger: GAAATAAGCAATGGAGGTGGGGTCCTTTGCTCGCGCCGAAATTCAAAGGAATAAATAGTTCCGGCGCGGGTGTTGAGAGCGGTGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286398.11
CDS-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCCAGCGGAAACAGCATaGAAGTGCTGCTGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTPAETA*KCCCAA
Trigger: AGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS TCA 90 bp CTTCTGCTCCATCTTCATTACTGGACAGGCCAGCGGAAACAGCATTaGAGTGCTGCTGTGCAGCTGCCAGAGCTTCAGCATCTTTATTAC +
Preference number: 5 (lower is better)
Translates to: LLLHLHYWTGQRKQH*SAAVQLPELQHLYY
Trigger: GTAATAAAGATGCTGAAGCTCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGGAGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS GCA 90 bp GCTCCATCTTCATTACTGGACAGGCCAGCGGAAACAGCATTGAAGTaGTGCTGTGCAGCTGCCAGAGCTTCAGCATCTTTATTACTTGCT +
Preference number: 5 (lower is better)
Translates to: APSSLLDRPAETALK*CCAAARASASLLLA
Trigger: AGCAAGTAATAAAGATGCTGAAGCTCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS TCA 90 bp GCAGTGTCTTCACCTACGTCCGTCATTGCATCCCCGAATTGTGCTTaGCTCCGGGAGGAGGGGAAGTCATTTAAGTATTTACTAGAGATG +
Preference number: 5 (lower is better)
Translates to: AVSSPTSVIASPNCA*LREEGKSFKYLLEM
Trigger: CATCTCTAGTAAATACTTAAATGACTTCCCCTCCTCCCGGAGTCAAGCACAATTCGGGGATGCAATGACGGACGTAGGTGAAGACACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS GCA 90 bp CCATCTTCATTACTGGACAGGCCAGCGGAAACAGCATTGAAGTGCTaGTGTGCAGCTGCCAGAGCTTCAGCATCTTTATTACTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PSSLLDRPAETALKC*CAAARASASLLLAS
Trigger: AGAAGCAAGTAATAAAGATGCTGAAGCTCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS TCA 90 bp GTATTTCCCAAGGCAACCTTGAACTCCAGACCATCCAAAACAGTTTaGCCCTCTGGTGGTGCAAGCATAGCATTAGCACCAGGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: VFPKATLNSRPSKTV*PSGGASIALAPGKR
Trigger: TCTTTTGCCTGGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS GCA 90 bp TTCATTACTGGACAGGCCAGCGGAAACAGCATTGAAGTGCTGCTGTaGAGCTGCCAGAGCTTCAGCATCTTTATTACTTGCTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: FITGQASGNSIEVLL*SCQSFSIFITCFLK
Trigger: CTTCAAGAAGCAAGTAATAAAGATGCTGAAGCTCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGGCCTGTCCAGTAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CCA 90 bp CAAGGCAACCTTGAACTCCAGACCATCCAAAACAGTTTGACCCTCTaGTGGTGCAAGCATAGCATTAGCACCAGGCAAAAGAGTAGAAAA +
Preference number: 5 (lower is better)
Translates to: QGNLELQTIQNSLTL*WCKHSISTRQKSRK
Trigger: TTTTCTACTCTTTTGCCTGGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGTCTGGAGTTCAAGGTTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCCAGCGGAAACAGCATaGAAGTGCTGCTGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: STHSIPRLHHADNNSIYLPAETA*KCCCAA
Trigger: AGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTGAGCTTTGCTGGAGCTaGGTTTGTAATAAATCTGCC +
Preference number: 5 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTELCWS*VCNKSA
Trigger: GGCAGATTTATTACAAACCAAGCTCCAGCAAAGCTC...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS GCA 90 bp GAAGTGCTGCTGTGCAGCTGCCAGAGCTTCAGCATCTTTATTACTTaGTTCTTGAAGGGCATGCAGTCCATCTGTTATCTTTTTAACCTC +
Preference number: 5 (lower is better)
Translates to: EVLLCSCQSFSIFIT*FLKGMQSICYLFNL
Trigger: GAGGTTAAAAAGATAACAGATGGACTGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCTGAAGCTCTGGCAGCTGCACAGCAGCACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGATTGACACAGAGGCTTaGGTAATACCAGCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVIDTEA*VIPACP
Trigger: TGGGCAGGCTGGTATTACCAAAGCCTCTGTGTCAAT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTTCATTGTTTTGCTCCTaGTGTTTTGCCACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTSLFCS*CFATSA
Trigger: TGCAGAAGTGGCAAAACACAAGGAGCAAAACAATGA...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCTGAGAATCATTGTTTaGCTCCTTGTGTTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTLRIIV*LLVFCH
Trigger: GTGGCAAAACACAAGGAGCAAAACAATGATTCTCAG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGACCATCCAAAACAGTTaGACCCTCTGGTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVTIQNS*TLWWCK
Trigger: CTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATCCCCGAATTGTGCTaGACTCCGGGAGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAIPELC*TPGGGE
Trigger: TTCCCCTCCTCCCGGAGTCAAGCACAATTCGGGGAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS-3UTR CAA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTCCTGTACTCTGGTGTaGTTGGCATTGACTCCATTG +
Preference number: 5 (lower is better)
Translates to: SDDVPKTVDSILMVFASVSCTLV*LALTPL
Trigger: CAATGGAGTCAATGCCAACAACACCAGAGTACAGGA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTCAGCTGAGCGTACTTaGGTATCTTCAGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVSAERT*VSSASK
Trigger: TTTGCTGGCTGAAGATACCAAAGTACGCTCAGCTGA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACCAGCGGAAACAGCATaGAAGTGCTGCTGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAPAETA*KCCCAA
Trigger: AGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCACCATCCAAAACAGTTaGACCCTCTGGTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSTIQNS*TLWWCK
Trigger: CTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGT...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTTCCCAAGGCAACCTaGAACTCCAGACCATCCAAA +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVFPKAT*NSRPSK
Trigger: TTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAAA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTTTCCCAAGGCAACCTaGAACTCCAGACCATCCAAA +
Preference number: 5 (lower is better)
Translates to: SDDVPKTVDSILMVFASVFPKAT*NSRPSK
Trigger: TTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAAA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTCCACATGTGCTCCTTaGGGTGGTTTTGCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHSTCAP*GGFALD
Trigger: ATCCAAGGCAAAACCACCCAAAGGAGCACATGTGGA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCCTGAGAACTTCCTCCACATGTGCTCCTTaGGGTGGTTTTGCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: YVDPRFHLVSFSFCLRTSSTCAP*GGFALD
Trigger: ATCCAAGGCAAAACCACCCAAAGGAGCACATGTGGA...GGAAGTTCTCAGGCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACATTGCATCCCCGAATaGTGCTTGACTCCGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAHCIPE*CLTPGG
Trigger: TCCTCCCGGAGTCAAGCACAATTCGGGGATGCAATG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS GCA 90 bp TATATCATTTTTACAGGCCATCATTTGACCAGCAAGAGTTGCTTCTaGTCCATCTTCATTACTGGACAGGCCAGCGGAAACAGCATTGAA +
Preference number: 5 (lower is better)
Translates to: YIIFTGHHLTSKSCF*SIFITGQASGNSIE
Trigger: TTCAATGCTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAAAATGATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS GCA 90 bp TTTACTTATATCATTTTTACAGGCCATCATTTGACCAGCAAGAGTTaGTTCTGCTCCATCTTCATTACTGGACAGGCCAGCGGAAACAGC +
Preference number: 5 (lower is better)
Translates to: FTYIIFTGHHLTSKS*FCSIFITGQASGNS
Trigger: GCTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGATTTTCGATACTGTCTaGGGTCAGCAAACCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVIFDTV*GQQTSD
Trigger: GTCAGAGGTTTGCTGACCCAAGACAGTATCGAAAAT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTCTGGTGTTGTTGGCATaGACTCCATTGATTAAATAT +
Preference number: 5 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTLVLLA*TPLIKY
Trigger: ATATTTAATCAATGGAGTCAATGCCAACAACACCAG...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTCAGCTGAGCGTACTTaGGTATCTTCAGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHSAERT*VSSASK
Trigger: TTTGCTGGCTGAAGATACCAAAGTACGCTCAGCTGA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTGAGATCAAATGCGCTTaGAGATTTAGTATTAACTCG +
Preference number: 5 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTEIKCA*RFSINS
Trigger: CGAGTTAATACTAAATCTCAAAGCGCATTTGATCTC...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTTGACCAGCAAGAGTaGCTTCTGCTCCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVFDQQE*LLLHLH
Trigger: ATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTTCGCTAGTGTCTTTGACCAGCAAGAGTaGCTTCTGCTCCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: SDDVPKTVDSILMVFASVFDQQE*LLLHLH
Trigger: ATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAA...GACACTAGCGAACACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTTGTCACAAACAAATGTaGTTCCAAAGACAAACTCCA +
Preference number: 5 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTCHKQM*FQRQTP
Trigger: TGGAGTTTGTCTTTGGAACAACATTTGTTTGTGACA...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp AGCCCAGGGCCAGGAAGTACGGCCATATATCAGGGGAAGTATGATAATAACACTTTTAATTACAGTGTCTaGGGCTGTTATCACCTCTTT +
Preference number: 5 (lower is better)
Translates to: SPGPGSTAIYQGKYDNNTFNYSV*GCYHLF
Trigger: AAAGAGGTGATAACAGCCCAAGACACTGTAATTAAA...AGTGTTATTATCATACTTCCCCTGATATATGGCCGTACTTCCTGGCCCTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGACATTTTGGATACCTTaGCAGCACCATCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVTFWIP*QHHLQP
Trigger: AGGCTGAAGATGGTGCTGCAAAGGTATCCAAAATGT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GCTACTGTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGATAGGCACTATTGGGTaGGCCAAAGAGGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: ATVETPSTNLVLKRTFALIGTIG*AKEVSL
Trigger: GAGAGACACCTCTTTGGCCAACCCAATAGTGCCTAT...CAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTACAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp CCAACACTCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCACCATCCAAAACAGTTaGACCCTCTGGTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: PTLFFPLCRSKVPSGIIFTIQNS*TLWWCK
Trigger: CTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGT...GAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGAGTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp TATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCCTGAGAACTTCCTTTCCCAAGGCAACCTaGAACTCCAGACCATCCAAA +
Preference number: 5 (lower is better)
Translates to: YVDPRFHLVSFSFCLRTSFPKAT*NSRPSK
Trigger: TTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAAA...GGAAGTTCTCAGGCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACCTCCTTTGGGTGGTTTaGCCTTGGATTTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHLLWVV*PWILLP
Trigger: AGGAAGCAAAATCCAAGGCAAAACCACCCAAAGGAG...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACACCTACGTCCGTCATaGCATCCCCGAATTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAHLRPS*HPRIVL
Trigger: AAGCACAATTCGGGGATGCAATGACGGACGTAGGTG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCATTTTCGATACTGTCTaGGGTCAGCAAACCTCTGAC +
Preference number: 5 (lower is better)
Translates to: STHSIPRLHHADNNSIYLIFDTV*GQQTSD
Trigger: GTCAGAGGTTTGCTGACCCAAGACAGTATCGAAAAT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATTGACACAGAGGCTTaGGTAATACCAGCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAIDTEA*VIPACP
Trigger: TGGGCAGGCTGGTATTACCAAAGCCTCTGTGTCAAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCCAGCTCTTTGCGTTaGCTTTCCTCACATGCCAGA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPASSSLR*LSSHAR
Trigger: TCTGGCATGTGAGGAAAGCAAACGCAAAGAGCTGGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCAGCATCTTTATTACTaGCTTCTTGAAGGGCATGCA +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVQHLYY*LLEGHA
Trigger: TGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCTG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTTTACAGGCCATCATTaGACCAGCAAGAGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSFTGHH*TSKSCF
Trigger: GAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCGAGCTTTGCTGGAGCTaGGTTTGTAATAAATCTGCC +
Preference number: 5 (lower is better)
Translates to: STHSIPRLHHADNNSIYLELCWS*VCNKSA
Trigger: GGCAGATTTATTACAAACCAAGCTCCAGCAAAGCTC...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCTGAGAATCATTGTTTaGCTCCTTGTGTTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVLRIIV*LLVFCH
Trigger: GTGGCAAAACACAAGGAGCAAAACAATGATTCTCAG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACGCCTCCCGTTTATGTTaGCTGATGTTGTGGTCTAAT +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHASRLC*LMLWSN
Trigger: ATTAGACCACAACATCAGCAAACATAAACGGGAGGC...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCGCCTCCCGTTTATGTTaGCTGATGTTGTGGTCTAAT +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSASRLC*LMLWSN
Trigger: ATTAGACCACAACATCAGCAAACATAAACGGGAGGC...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATAGGCACTATTGGGTaGGCCAAAGAGGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAIGTIG*AKEVSL
Trigger: GAGAGACACCTCTTTGGCCAACCCAATAGTGCCTAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACATAGACCCAAAGTCCTaGTTCACCTTTTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHIDPKS*FTFCHA
Trigger: TGCATGGCAAAAGGTGAACAAGGACTTTGGGTCTAT...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAACCATCCAAAACAGTTaGACCCTCTGGTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPATIQNS*TLWWCK
Trigger: CTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCCACATGTGCTCCTTaGGGTGGTTTTGCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPASTCAP*GGFALD
Trigger: ATCCAAGGCAAAACCACCCAAAGGAGCACATGTGGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGGCCACAAACCAGTTTaGTCTGTAAGTTCCCGCAGT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAGHKPV*SVSSRS
Trigger: ACTGCGGGAACTTACAGACAAAACTGGTTTGTGGCC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTGTACTCTGGTGTTGTaGGCATTGACTCCATTGATT +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHCTLVL*ALTPLI
Trigger: AATCAATGGAGTCAATGCCAACAACACCAGAGTACA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTGTACTCTGGTGTTGTaGGCATTGACTCCATTGATT +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSCTLVL*ALTPLI
Trigger: AATCAATGGAGTCAATGCCAACAACACCAGAGTACA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCCTGTACTCTGGTGTaGTTGGCATTGACTCCATTG +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPASCTLV*LALTPL
Trigger: CAATGGAGTCAATGCCAACAACACCAGAGTACAGGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCAGCTGAGCGTACTTaGGTATCTTCAGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPASAERT*VSSASK
Trigger: TTTGCTGGCTGAAGATACCAAAGTACGCTCAGCTGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTCCAGCTCTTTGCGTTaGCTTTCCTCACATGCCAGA +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSSSSLR*LSSHAR
Trigger: TCTGGCATGTGAGGAAAGCAAACGCAAAGAGCTGGA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTTTATTACTTGCTTCTaGAAGGGCATGCAGTCCATC +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSFITCF*KGMQSI
Trigger: GATGGACTGCATGCCCTTCAAGAAGCAAGTAATAAA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CCAACACTCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCGCCTCCCGTTTATGTTaGCTGATGTTGTGGTCTAAT +
Preference number: 5 (lower is better)
Translates to: PTLFFPLCRSKVPSGIIFASRLC*LMLWSN
Trigger: ATTAGACCACAACATCAGCAAACATAAACGGGAGGC...GAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGAGTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGATAGGCACTATTGGGTaGGCCAAAGAGGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWIGTIG*AKEVSL
Trigger: GAGAGACACCTCTTTGGCCAACCCAATAGTGCCTAT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTATAGGCACTATTGGGTaGGCCAAAGAGGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSIGTIG*AKEVSL
Trigger: GAGAGACACCTCTTTGGCCAACCCAATAGTGCCTAT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTTCCCAAGGCAACCTaGAACTCCAGACCATCCAAA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFPKAT*NSRPSK
Trigger: TTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCATCTGTCCAATGTTTaGGGTATGAGAAAGATCCAA +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVHLSNV*GMRKIQ
Trigger: TTGGATCTTTCTCATACCCAAAACATTGGACAGATG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACTCCTTTGGGTGGTTTaGCCTTGGATTTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPALLWVV*PWILLP
Trigger: AGGAAGCAAAATCCAAGGCAAAACCACCCAAAGGAG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTCCACATGTGCTCCTTaGGGTGGTTTTGCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSSTCAP*GGFALD
Trigger: ATCCAAGGCAAAACCACCCAAAGGAGCACATGTGGA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGCTGGCACCTACATTCTaGTTTACCAATAGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVLAPTF*FTNRLL
Trigger: TAACAACCTATTGGTAAACAAGAATGTAGGTGCCAG...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATTTTCGATACTGTCTaGGGTCAGCAAACCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAIFDTV*GQQTSD
Trigger: GTCAGAGGTTTGCTGACCCAAGACAGTATCGAAAAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTCCTGTACTCTGGTGTaGTTGGCATTGACTCCATTG +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSSCTLV*LALTPL
Trigger: CAATGGAGTCAATGCCAACAACACCAGAGTACAGGA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTTGACCAGCAAGAGTaGCTTCTGCTCCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFDQQE*LLLHLH
Trigger: ATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTTACAGGCCATCATTaGACCAGCAAGAGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFTGHH*TSKSCF
Trigger: GAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTATGCAAATCGAAGATaGGGAAATCTGGCTAATAGA +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVYANRR*GNLANR
Trigger: TCTATTAGCCAGATTTCCCAATCTTCGATTTGCATA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTTCTTCTCTGGATCCTaGTATGCAAATCGAAGATTG +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSFFSGS*YANRRL
Trigger: CAATCTTCGATTTGCATACAAGGATCCAGAGAAGAA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTTCTTCTCTGGATCCTaGTATGCAAATCGAAGATTG +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHFFSGS*YANRRL
Trigger: CAATCTTCGATTTGCATACAAGGATCCAGAGAAGAA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGTCAAAGGCCACTTTTTaGGCATTATCCATATTGTCA +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVSKATF*ALSILS
Trigger: TGACAATATGGATAATGCCAAAAAAGTGGCCTTTGA...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAGCTTTGCTGGAGCTaGGTTTGTAATAAATCTGCC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAELCWS*VCNKSA
Trigger: GGCAGATTTATTACAAACCAAGCTCCAGCAAAGCTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTACAGCTTCAAGCTGTaGTTTGTAAGATGTATGCTC +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHYSFKL*FVRCML
Trigger: GAGCATACATCTTACAAACAACAGCTTGAAGCTGTA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGCCTCCCGTTTATGTTaGCTGATGTTGTGGTCTAAT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAASRLC*LMLWSN
Trigger: ATTAGACCACAACATCAGCAAACATAAACGGGAGGC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAACATTTTGGATACCTTaGCAGCACCATCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPATFWIP*QHHLQP
Trigger: AGGCTGAAGATGGTGCTGCAAAGGTATCCAAAATGT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATAGACCCAAAGTCCTaGTTCACCTTTTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAIDPKS*FTFCHA
Trigger: TGCATGGCAAAAGGTGAACAAGGACTTTGGGTCTAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp ATCCATGTTAGTTTCCAACACTCTTCTTTCCTTTATGTAGATCCAAGGTTCCATATAGACCCAAAGTCCTaGTTCACCTTTTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: IHVSFQHSSFLYVDPRFHIDPKS*FTFCHA
Trigger: TGCATGGCAAAAGGTGAACAAGGACTTTGGGTCTAT...ATGGAACCTTGGATCTACATAAAGGAAAGAAGAGTGTTGGAAACTAACATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACCATCTGTCCAATGTTTaGGGTATGAGAAAGATCCAA +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHHLSNV*GMRKIQ
Trigger: TTGGATCTTTCTCATACCCAAAACATTGGACAGATG...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GGTCACTGTTCTAGTGATGACGTACCAAAAACTGTAGACAGTATTCTCATGGTGACACCATCCACAAACTaGGTTTTGAAAAGAACGTTT +
Preference number: 5 (lower is better)
Translates to: GHCSSDDVPKTVDSILMVTPSTN*VLKRTF
Trigger: AAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGT...CACCATGAGAATACTGTCTACAGTTTTTGGTACGTCATCACTAGAACAGTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTCTCCTTTGGGTGGTTTaGCCTTGGATTTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSLLWVV*PWILLP
Trigger: AGGAAGCAAAATCCAAGGCAAAACCACCCAAAGGAG...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TACTGTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTCTCCTTTGGGTGGTTTaGCCTTGGATTTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: YCRNTIHKLGFEKNVCIVLLWVV*PWILLP
Trigger: AGGAAGCAAAATCCAAGGCAAAACCACCCAAAGGAG...AACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCTATGTGTTCCCTTTGTaGGTCCAGTTACCTGATTTA +
Preference number: 5 (lower is better)
Translates to: STHSIPRLHHADNNSIYLYVFPL*VQLPDL
Trigger: TAAATCAGGTAACTGGACCAACAAAGGGAACACATA...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTTATATGTGTTCCCTTaGTTGGTCCAGTTACCTGAT +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHLYVFP*LVQLPD
Trigger: ATCAGGTAACTGGACCAACAAAGGGAACACATATAA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTTATATGTGTTCCCTTaGTTGGTCCAGTTACCTGAT +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSLYVFP*LVQLPD
Trigger: ATCAGGTAACTGGACCAACAAAGGGAACACATATAA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCAAACTTCAGATAAATTaGCAGCAGATAGTACCACGC +
Preference number: 5 (lower is better)
Translates to: STHSIPRLHHADNNSIYLKLQIN*QQIVPR
Trigger: GCGTGGTACTATCTGCTGCAAATTTATCTGAAGTTT...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCCTGGCACCTACATTCTaGTTTACCAATAGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSLAPTF*FTNRLL
Trigger: TAACAACCTATTGGTAAACAAGAATGTAGGTGCCAG...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAGGAATTTCATCCCTTaGAACTGGAAAGCGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPARNFIP*NWKAED
Trigger: GTCTTCCGCTTTCCAGTTCAAAGGGATGAAATTCCT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp GTAGAAACACCATCCACAAACTTGGTTTTGAAAAGAACGTTTGCATTGTTGAACATGGTTCTGCTGTTTTaGTCTCTGACCACCACTAAG +
Preference number: 5 (lower is better)
Translates to: VETPSTNLVLKRTFALLNMVLLF*SLTTTK
Trigger: CTTAGTGGTGGTCAGAGACAAAAACAGCAGAACCAT...GTTCAACAATGCAAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGTTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS GCA 90 bp TTTGAAATCATAGGCACTATTGGGTTGGCCAAAGAGGTGTCTCTCTaGATTAATCCAGTCATAATCTTTCAACATTTTGGATACCTTTGC +
Preference number: 5 (lower is better)
Translates to: FEIIGTIGLAKEVSL*INPVIIFQHFGYLC
Trigger: GCAAAGGTATCCAAAATGTTGAAAGATTATGACTGGATTAATGCAGAGAGACACCTCTTTGGCCAACCCAATAGTGCCTATGATTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS CCA 90 bp AACAAATGTTGTTCCAAAGACAAACTCCATTGCTTTCTGAAGTTCTaGTTTATATTCAACCAAGGAAAGAGCCACATGAACGTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: NKCCSKDKLHCFLKF*FIFNQGKSHMNVVR
Trigger: CCTGACAACGTTCATGTGGCTCTTTCCTTGGTTGAATATAAACCAGAACTTCAGAAAGCAATGGAGTTTGTCTTTGGAACAACATTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCCTGGTGTTGTTGGCATaGACTCCATTGATTAAATAT +
Preference number: 5 (lower is better)
Translates to: STHSIPRLHHADNNSIYLLVLLA*TPLIKY
Trigger: ATATTTAATCAATGGAGTCAATGCCAACAACACCAG...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATGTACTCTGGTGTTGTaGGCATTGACTCCATTGATT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPACTLVL*ALTPLI
Trigger: AATCAATGGAGTCAATGCCAACAACACCAGAGTACA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCGAGATCAAATGCGCTTaGAGATTTAGTATTAACTCG +
Preference number: 5 (lower is better)
Translates to: STHSIPRLHHADNNSIYLEIKCA*RFSINS
Trigger: CGAGTTAATACTAAATCTCAAAGCGCATTTGATCTC...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTTATTACTTGCTTCTaGAAGGGCATGCAGTCCATC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFITCF*KGMQSI
Trigger: GATGGACTGCATGCCCTTCAAGAAGCAAGTAATAAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACAGCATCTTTATTACTaGCTTCTTGAAGGGCATGCA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAQHLYY*LLEGHA
Trigger: TGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCTG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGTTTACAGGCCATCATTaGACCAGCAAGAGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWFTGHH*TSKSCF
Trigger: GAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAA...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAATTCTAAAGCTGTGGTaGCAGAAGTGTCTTTCACAC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAILKLW*QKCLSH
Trigger: GTGTGAAAGACACTTCTGCAACCACAGCTTTAGAAT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp TCATATTACTGCAGATGTGTGAAACAAATGTCCCCAATCCCCTTAATGTCTTCCTGTCACAAACAAATGTaGTTCCAAAGACAAACTCCA +
Preference number: 5 (lower is better)
Translates to: SYYCRCVKQMSPIPLMSSCHKQM*FQRQTP
Trigger: TGGAGTTTGTCTTTGGAACAACATTTGTTTGTGACA...GGAAGACATTAAGGGGATTGGGGACATTTGTTTCACACATCTGCAGTAATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACTCAAAGGCCACTTTTTaGGCATTATCCATATTGTCA +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHSKATF*ALSILS
Trigger: TGACAATATGGATAATGCCAAAAAAGTGGCCTTTGA...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp TCAACTCACTCAATTCCTCGATTACACCATGCTGACAACAACAGTATTTACCTCTTTAATTACAGTGTCTaGGGCTGTTATCACCTCTTT +
Preference number: 5 (lower is better)
Translates to: STHSIPRLHHADNNSIYLFNYSV*GCYHLF
Trigger: AAAGAGGTGATAACAGCCCAAGACACTGTAATTAAA...GAGGTAAATACTGTTGTTGTCAGCATGGTGTAATCGAGGAATTGAGTGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCATTGTTTTGCTCCTaGTGTTTTGCCACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPASLFCS*CFATSA
Trigger: TGCAGAAGTGGCAAAACACAAGGAGCAAAACAATGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACTGAGAATCATTGTTTaGCTCCTTGTGTTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPALRIIV*LLVFCH
Trigger: GTGGCAAAACACAAGGAGCAAAACAATGATTCTCAG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGACATTTTGGATACCTTaGCAGCACCATCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWTFWIP*QHHLQP
Trigger: AGGCTGAAGATGGTGCTGCAAAGGTATCCAAAATGT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACGTTTTGCCTTGGATTTaGCTTCCTTTGAAATCTTTC +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHVLPWI*LPLKSF
Trigger: GAAAGATTTCAAAGGAAGCAAAATCCAAGGCAAAAC...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTGGGTGGTTTTGCCTaGGATTTTGCTTCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPALGGFA*DFASFE
Trigger: TTCAAAGGAAGCAAAATCCAAGGCAAAACCACCCAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp TCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCTTGGGTGGTTTTGCCTaGGATTTTGCTTCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: SSFLYVDPRFHLVSFSFCLGGFA*DFASFE
Trigger: TTCAAAGGAAGCAAAATCCAAGGCAAAACCACCCAA...GCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp ATGGAAGATCAGATTACATCATGTCAGACCTTTCATGATTCAGTTTGGGGTCACGAATTGGTAACTGTTTaGGCACAGTCTGTAATACAT +
Preference number: 5 (lower is better)
Translates to: MEDQITSCQTFHDSVWGHELVTV*AQSVIH
Trigger: ATGTATTACAGACTGTGCCAAAACAGTTACCAATTC...GTGACCCCAAACTGAATCATGAAAGGTCTGACATGATGTAATCTGATCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS TCA 90 bp AAGATTCTGAGCAACTCTCAGAGTTTCTGGTGCAATACATCTGGCTaGAATTTTATTGAGTGGAATTATAGTGTATCGACGTTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: KILSNSQSFWCNTSG*NFIEWNYSVSTFQF
Trigger: GAACTGAAACGTCGATACACTATAATTCCACTCAATAAAATTTCAGCCAGATGTATTGCACCAGAAACTCTGAGAGTTGCTCAGAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTCTCTCATTACTTTTaGGTACTCCAAGTAGGACGA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFSHYF*VLQVGR
Trigger: TCGTCCTACTTGGAGTACCAAAAAGTAATGAGAGAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGTTTATTACTTGCTTCTaGAAGGGCATGCAGTCCATC +
Preference number: 5 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWFITCF*KGMQSI
Trigger: GATGGACTGCATGCCCTTCAAGAAGCAAGTAATAAA...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTCTTCTCTGGATCCTaGTATGCAAATCGAAGATTG +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFFSGS*YANRRL
Trigger: CAATCTTCGATTTGCATACAAGGATCCAGAGAAGAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTATTCTAAAGCTGTGGTaGCAGAAGTGTCTTTCACAC +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSILKLW*QKCLSH
Trigger: GTGTGAAAGACACTTCTGCAACCACAGCTTTAGAAT...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATACAGCTTCAAGCTGTaGTTTGTAAGATGTATGCTC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAYSFKL*FVRCML
Trigger: GAGCATACATCTTACAAACAACAGCTTGAAGCTGTA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGTCATTGTTTTGCTCCTaGTGTTTTGCCACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWSLFCS*CFATSA
Trigger: TGCAGAAGTGGCAAAACACAAGGAGCAAAACAATGA...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACATCTGTCCAATGTTTaGGGTATGAGAAAGATCCAA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAHLSNV*GMRKIQ
Trigger: TTGGATCTTTCTCATACCCAAAACATTGGACAGATG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp TCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCCATCTGTCCAATGTTTaGGGTATGAGAAAGATCCAA +
Preference number: 5 (lower is better)
Translates to: SSFLYVDPRFHLVSFSFCHLSNV*GMRKIQ
Trigger: TTGGATCTTTCTCATACCCAAAACATTGGACAGATG...GCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTTGGGTGGTTTTGCCTaGGATTTTGCTTCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSLGGFA*DFASFE
Trigger: TTCAAAGGAAGCAAAATCCAAGGCAAAACCACCCAA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAAAACTTCAGATAAATTaGCAGCAGATAGTACCACGC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAKLQIN*QQIVPR
Trigger: GCGTGGTACTATCTGCTGCAAATTTATCTGAAGTTT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCACTGGTGTTGTTGGCATaGACTCCATTGATTAAATAT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPALVLLA*TPLIKY
Trigger: ATATTTAATCAATGGAGTCAATGCCAACAACACCAG...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTTCTCTCATTACTTTTaGGTACTCCAAGTAGGACGA +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSFSHYF*VLQVGR
Trigger: TCGTCCTACTTGGAGTACCAAAAAGTAATGAGAGAA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAGATCAAATGCGCTTaGAGATTTAGTATTAACTCG +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAEIKCA*RFSINS
Trigger: CGAGTTAATACTAAATCTCAAAGCGCATTTGATCTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATATGCAAATCGAAGATaGGGAAATCTGGCTAATAGA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAYANRR*GNLANR
Trigger: TCTATTAGCCAGATTTCCCAATCTTCGATTTGCATA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATGTCACAAACAAATGTaGTTCCAAAGACAAACTCCA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPACHKQM*FQRQTP
Trigger: TGGAGTTTGTCTTTGGAACAACATTTGTTTGTGACA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATCAAAGGCCACTTTTTaGGCATTATCCATATTGTCA +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPASKATF*ALSILS
Trigger: TGACAATATGGATAATGCCAAAAAAGTGGCCTTTGA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCATTTAATTACAGTGTCTaGGGCTGTTATCACCTCTTT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAFNYSV*GCYHLF
Trigger: AAAGAGGTGATAACAGCCCAAGACACTGTAATTAAA...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAACACCATCCACAAACTaGGTTTTGAAAAGAACGTTT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPATPSTN*VLKRTF
Trigger: AAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGT...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGTTTTGCCTTGGATTTaGCTTCCTTTGAAATCTTTC +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAVLPWI*LPLKSF
Trigger: GAAAGATTTCAAAGGAAGCAAAATCCAAGGCAAAAC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS-3UTR CAA 90 bp TCTTCTTTCCTTTATGTAGATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCGTTTTGCCTTGGATTTaGCTTCCTTTGAAATCTTTC +
Preference number: 5 (lower is better)
Translates to: SSFLYVDPRFHLVSFSFCVLPWI*LPLKSF
Trigger: GAAAGATTTCAAAGGAAGCAAAATCCAAGGCAAAAC...GCAAAAGGAAAATGATACCAGATGGAACCTTGGATCTACATAAAGGAAAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS-3UTR CAA 90 bp CCAGATTCAATCCTTTCCAATGTGTCCCATAATATCAATTACTGCATGTTTTCTTATGTGTTCCCTTTGTaGGTCCAGTTACCTGATTTA +
Preference number: 5 (lower is better)
Translates to: PDSILSNVSHNINYCMFSYVFPL*VQLPDL
Trigger: TAAATCAGGTAACTGGACCAACAAAGGGAACACATA...AGAAAACATGCAGTAATTGATATTATGGGACACATTGGAAAGGATTGAATCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp CTTTTACATATAGAATCGGGTATCTCAGGATCCCTAATATATAAAAGACCCGCAGAATTGGTAACTGTTTaGGCACAGTCTGTAATACAT +
Preference number: 5 (lower is better)
Translates to: LLHIESGISGSLIYKRPAELVTV*AQSVIH
Trigger: ATGTATTACAGACTGTGCCAAAACAGTTACCAATTC...TGCGGGTCTTTTATATATTAGGGATCCTGAGATACCCGATTCTATATGTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGTATGCAAATCGAAGATaGGGAAATCTGGCTAATAGA +
Preference number: 5 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWYANRR*GNLANR
Trigger: TCTATTAGCCAGATTTCCCAATCTTCGATTTGCATA...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGACACCATCCACAAACTaGGTTTTGAAAAGAACGTTT +
Preference number: 5 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWTPSTN*VLKRTF
Trigger: AAACGTTCTTTTCAAAACCAAGTTTGTGGATGGTGT...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS-3UTR CAA 90 bp ACAATAAATACAAATGTTCAAGCTGTCAGTGACGTAGTATATCTTAGGTTCTGGGTTTTGCCTTGGATTTaGCTTCCTTTGAAATCTTTC +
Preference number: 5 (lower is better)
Translates to: TINTNVQAVSDVVYLRFWVLPWI*LPLKSF
Trigger: GAAAGATTTCAAAGGAAGCAAAATCCAAGGCAAAAC...CCAGAACCTAAGATATACTACGTCACTGACAGCTTGAACATTTGTATTTATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286398.11
ENST00000374793.8
CDS GCA 72 bp GTAAGTTCCCGCAGTGTCTTCACCTACGTCCGTCATTaGATCCCCGAATTGTGCTTGACTCCGGGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: VSSRSVFTYVRH*IPELCLTPGGG
Trigger: CCCTCCTCCCGGAGTCAAGCACAATTCGGGGATGCAATGACGGACGTAGGTGAAGACACTGCGGGAACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS GCA 72 bp CTACAAAGCGAACTTCACCATAGCGGCTACAACACCTaGCACACCGCTCTCAACACCCGCGCCGGAACTATT +
Preference number: 6 (lower is better)
Translates to: LQSELHHSGYNT*HTALNTRAGTI
Trigger: AATAGTTCCGGCGCGGGTGTTGAGAGCGGTGTGGCAGGTGTTGTAGCCGCTATGGTGAAGTTCGCTTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374793.8
ENST00000440179.5
CDS CAA 72 bp TGTAAGTTCCCGCAGTGTCTTCACCTACGTCCGTCATaGCATCCCCGAATTGTGCTTGACTCCGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: CKFPQCLHLRPS*HPRIVLDSGRR
Trigger: CCTCCTCCCGGAGTCAAGCACAATTCGGGGATGCAATGACGGACGTAGGTGAAGACACTGCGGGAACTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS TCA 72 bp CGCTCTCAACACCCGCGCCGGAACTATTTATTCCTTTaGATTTCGGCGCGAGCAAAGGACCCCACCTCCATT +
Preference number: 6 (lower is better)
Translates to: RSQHPRRNYLFL*ISARAKDPTSI
Trigger: AATGGAGGTGGGGTCCTTTGCTCGCGCCGAAATTCAAAGGAATAAATAGTTCCGGCGCGGGTGTTGAGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286398.11
CDS CAA 90 bp CCTGCCACACCGCTCTCAACACCCGCGCCGGAACTATTTATTCCTTaGAATTTCGGCGCGAGCAAAGGACCCCACCTCCATTGCTTATTT +
Preference number: 6 (lower is better)
Translates to: PATPLSTPAPELFIP*NFGASKGPHLHCLF
Trigger: AAATAAGCAATGGAGGTGGGGTCCTTTGCTCGCGCCGAAATTCAAAGGAATAAATAGTTCCGGCGCGGGTGTTGAGAGCGGTGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286398.11
CDS TCA 72 bp GCTGCCTGGGATCGAGCACCTCCACTCAATGTCCCATaGGGATCAAACACATCACCTCCGAGAGTTACAGTT +
Preference number: 6 (lower is better)
Translates to: AAWDRAPPLNVP*GSNTSPPRVTV
Trigger: AACTGTAACTCTCGGAGGTGATGTGTTTGATCCTCATGGGACATTGAGTGGAGGTGCTCGATCCCAGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS GCA 72 bp TCATTACTGGACAGGCCAGCGGAAACAGCATTGAAGTaGTGCTGTGCAGCTGCCAGAGCTTCAGCATCTTTA +
Preference number: 6 (lower is better)
Translates to: SLLDRPAETALK*CCAAARASASL
Trigger: TAAAGATGCTGAAGCTCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGGCCTGTCCAGTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 90 bp GCTTCTGCTCCATCTTCATTACTGGACAGGCCAGCGGAAACAGCATaGAAGTGCTGCTGTGCAGCTGCCAGAGCTTCAGCATCTTTATTA +
Preference number: 6 (lower is better)
Translates to: ASAPSSLLDRPAETA*KCCCAAARASASLL
Trigger: TAATAAAGATGCTGAAGCTCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGGAGCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS GCA 72 bp TTACTGGACAGGCCAGCGGAAACAGCATTGAAGTGCTaGTGTGCAGCTGCCAGAGCTTCAGCATCTTTATTA +
Preference number: 6 (lower is better)
Translates to: LLDRPAETALKC*CAAARASASLL
Trigger: TAATAAAGATGCTGAAGCTCTGGCAGCTGCACAGCAGCACTTCAATGCTGTTTCCGCTGGCCTGTCCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 72 bp CAAGGCAACCTTGAACTCCAGACCATCCAAAACAGTTaGACCCTCTGGTGGTGCAAGCATAGCATTAGCACC +
Preference number: 6 (lower is better)
Translates to: QGNLELQTIQNS*TLWWCKHSIST
Trigger: GGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGTCTGGAGTTCAAGGTTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS CAA 90 bp GGTATTTCCCAAGGCAACCTTGAACTCCAGACCATCCAAAACAGTTaGACCCTCTGGTGGTGCAAGCATAGCATTAGCACCAGGCAAAAG +
Preference number: 6 (lower is better)
Translates to: GISQGNLELQTIQNS*TLWWCKHSISTRQK
Trigger: CTTTTGCCTGGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS TCA 72 bp AAGGCAACCTTGAACTCCAGACCATCCAAAACAGTTTaGCCCTCTGGTGGTGCAAGCATAGCATTAGCACCA +
Preference number: 6 (lower is better)
Translates to: KATLNSRPSKTV*PSGGASIALAP
Trigger: TGGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGTCTGGAGTTCAAGGTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS TCA 72 bp TCACCTACGTCCGTCATTGCATCCCCGAATTGTGCTTaGCTCCGGGAGGAGGGGAAGTCATTTAAGTATTTA +
Preference number: 6 (lower is better)
Translates to: SPTSVIASPNCA*LREEGKSFKYL
Trigger: TAAATACTTAAATGACTTCCCCTCCTCCCGGAGTCAAGCACAATTCGGGGATGCAATGACGGACGTAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS GCA 72 bp CTCCAGACCATCCAAAACAGTTTGACCCTCTGGTGGTaGAAGCATAGCATTAGCACCAGGCAAAAGAGTAGA +
Preference number: 6 (lower is better)
Translates to: LQTIQNSLTLWW*KHSISTRQKSR
Trigger: TCTACTCTTTTGCCTGGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS CCA 72 bp CTTGAACTCCAGACCATCCAAAACAGTTTGACCCTCTaGTGGTGCAAGCATAGCATTAGCACCAGGCAAAAG +
Preference number: 6 (lower is better)
Translates to: LELQTIQNSLTL*WCKHSISTRQK
Trigger: CTTTTGCCTGGTGCTAATGCTATGCTTGCACCACCAGAGGGTCAAACTGTTTTGGATGGTCTGGAGTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS TCA 72 bp ATGCATTTTCGATACTGTCTTGGGTCAGCAAACCTCTaGCAGGAATCAAACAGGCCACAAACCAGTTCGCTG +
Preference number: 6 (lower is better)
Translates to: MHFRYCLGSANL*QESNRPQTSSL
Trigger: CAGCGAACTGGTTTGTGGCCTGTTTGATTCCTGTCAGAGGTTTGCTGACCCAAGACAGTATCGAAAATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374793.8
CDS CAA 72 bp GCTGTGCAGCTGCCAGAGCTTCAGCATCTTTATTACTaGCTTCTTGAAGGGCATGCAGTCCATCTGTTATCT +
Preference number: 6 (lower is better)
Translates to: AVQLPELQHLYY*LLEGHAVHLLS
Trigger: AGATAACAGATGGACTGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCTGAAGCTCTGGCAGCTGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS GCA 72 bp CTGTGCAGCTGCCAGAGCTTCAGCATCTTTATTACTTaGTTCTTGAAGGGCATGCAGTCCATCTGTTATCTT +
Preference number: 6 (lower is better)
Translates to: LCSCQSFSIFIT*FLKGMQSICYL
Trigger: AAGATAACAGATGGACTGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCTGAAGCTCTGGCAGCTGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS GCA 72 bp ATCATTTTTACAGGCCATCATTTGACCAGCAAGAGTTaGTTCTGCTCCATCTTCATTACTGGACAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: IIFTGHHLTSKS*FCSIFITGQAS
Trigger: GCTGGCCTGTCCAGTAATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAAAATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 72 bp TTGGATTTCCCACTACCATTTAAGCCAGTGATAGCATaGAAGAGGGGGTCAAAACCATTGACTTCGGTCCTC +
Preference number: 6 (lower is better)
Translates to: LDFPLPFKPVIA*KRGSKPLTSVL
Trigger: GAGGACCGAAGTCAATGGTTTTGACCCCCTCTTCAATGCTATCACTGGCTTAAATGGTAGTGGGAAATCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS TCA 72 bp ATGCATTTTCGATACTGTCTTGGGTCAGCAAACCTCTaGCAGGAATCAAACAGGCCACAAACCAGTTCTGTA +
Preference number: 6 (lower is better)
Translates to: MHFRYCLGSANL*QESNRPQTSSV
Trigger: TACAGAACTGGTTTGTGGCCTGTTTGATTCCTGTCAGAGGTTTGCTGACCCAAGACAGTATCGAAAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286398.11
CDS TCA 72 bp TTAGGTTTTCTTTCCAGGTATTTCCCAAGGCAACCTTaGACTCCAGACCATCCAAAACAGTTTGACCCTCTG +
Preference number: 6 (lower is better)
Translates to: LGFLSRYFPRQP*TPDHPKQFDPL
Trigger: CAGAGGGTCAAACTGTTTTGGATGGTCTGGAGTTCAAGGTTGCCTTGGGAAATACCTGGAAAGAAAACCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS TCA 72 bp ATGCATTTTCGATACTGTCTTGGGTCAGCAAACCTCTaGCAGGAATCAAACAGGCCACAAACCAGTTTTGTC +
Preference number: 6 (lower is better)
Translates to: MHFRYCLGSANL*QESNRPQTSFV
Trigger: GACAAAACTGGTTTGTGGCCTGTTTGATTCCTGTCAGAGGTTTGCTGACCCAAGACAGTATCGAAAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS CAA 72 bp TATCATTTTTACAGGCCATCATTTGACCAGCAAGAGTaGCTTCTGCTCCATCTTCATTACTGGACAGGCCAG +
Preference number: 6 (lower is better)
Translates to: YHFYRPSFDQQE*LLLHLHYWTGQ
Trigger: CTGGCCTGTCCAGTAATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAAAATGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 90 bp CTTTACTTATATCATTTTTACAGGCCATCATTTGACCAGCAAGAGTaGCTTCTGCTCCATCTTCATTACTGGACAGGCCAGCGGAAACAG +
Preference number: 6 (lower is better)
Translates to: LYLYHFYRPSFDQQE*LLLHLHYWTGQRKQ
Trigger: CTGTTTCCGCTGGCCTGTCCAGTAATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS TCA 72 bp GCTGCCAGAGCTTCAGCATCTTTATTACTTGCTTCTTaGAGGGCATGCAGTCCATCTGTTATCTTTTTAACC +
Preference number: 6 (lower is better)
Translates to: AARASASLLLAS*RACSPSVIFLT
Trigger: GGTTAAAAAGATAACAGATGGACTGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCTGAAGCTCTGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 72 bp AGGGTTGTTAGTTTTGAAATCATAGGCACTATTGGGTaGGCCAAAGAGGTGTCTCTCTGCATTAATCCAGTC +
Preference number: 6 (lower is better)
Translates to: RVVSFEIIGTIG*AKEVSLCINPV
Trigger: GACTGGATTAATGCAGAGAGACACCTCTTTGGCCAACCCAATAGTGCCTATGATTTCAAAACTAACAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS CAA 90 bp GCTTTCCTCACATGCCAGATTTTTCTTCTTGAGATCAAATGCGCTTaGAGATTTAGTATTAACTCGCTGAGCCTCTGCAAGAGCATCTTC +
Preference number: 6 (lower is better)
Translates to: AFLTCQIFLLEIKCA*RFSINSLSLCKSIF
Trigger: GAAGATGCTCTTGCAGAGGCTCAGCGAGTTAATACTAAATCTCAAAGCGCATTTGATCTCAAGAAGAAAAATCTGGCATGTGAGGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS TCA 72 bp ATCCAAGGTTCCATCTGGTATCATTTTCCTTTTGCCTaGGAACTTCCTTTAACCTGTAGTATGGTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: IQGSIWYHFPFA*ELPLTCSMVLL
Trigger: CAGCAGAACCATACTACAGGTTAAAGGAAGTTCTCAGGCAAAAGGAAAATGATACCAGATGGAACCTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493955.1
CDS CAA 72 bp AGCTGCCAGAGCTTCAGCATCTTTATTACTTGCTTCTaGAAGGGCATGCAGTCCATCTGTTATCTTTTTAAC +
Preference number: 6 (lower is better)
Translates to: SCQSFSIFITCF*KGMQSICYLFN
Trigger: GTTAAAAAGATAACAGATGGACTGCATGCCCTTCAAGAAGCAAGTAATAAAGATGCTGAAGCTCTGGCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 72 bp ACTAGAGATGAGATGTATCTCATATTCTCCAACTTCTaGCTTTTACTCAGGCTTTTACCTCGCTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: TRDEMYLIFSNF*LLLRLLPRFSR
Trigger: CCTGGAGAAGCGAGGTAAAAGCCTGAGTAAAAGCAAGAAGTTGGAGAATATGAGATACATCTCATCTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374787.7
CDS CAA 90 bp CTGACTTTCATAGGATTTGATAGCTTCATTTACAGCTTCAAGCTGTaGTTTGTAAGATGTATGCTCTCTCTTGAGCTCTTCCAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: LTFIGFDSFIYSFKL*FVRCMLSLELFQFQ
Trigger: CTGGAACTGGAAGAGCTCAAGAGAGAGCATACATCTTACAAACAACAGCTTGAAGCTGTAAATGAAGCTATCAAATCCTATGAAAGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS GCA 72 bp ATAGGCACTATTGGGTTGGCCAAAGAGGTGTCTCTCTaGATTAATCCAGTCATAATCTTTCAACATTTTGGA +
Preference number: 6 (lower is better)
Translates to: IGTIGLAKEVSL*INPVIIFQHFG
Trigger: TCCAAAATGTTGAAAGATTATGACTGGATTAATGCAGAGAGACACCTCTTTGGCCAACCCAATAGTGCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
ENST00000493955.1
CDS CAA 72 bp ACATGCCAGATTTTTCTTCTTGAGATCAAATGCGCTTaGAGATTTAGTATTAACTCGCTGAGCCTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: TCQIFLLEIKCA*RFSINSLSLCK
Trigger: CTTGCAGAGGCTCAGCGAGTTAATACTAAATCTCAAAGCGCATTTGATCTCAAGAAGAAAAATCTGGCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CCA 72 bp TGTTCCAAAGACAAACTCCATTGCTTTCTGAAGTTCTaGTTTATATTCAACCAAGGAAAGAGCCACATGAAC +
Preference number: 6 (lower is better)
Translates to: CSKDKLHCFLKF*FIFNQGKSHMN
Trigger: GTTCATGTGGCTCTTTCCTTGGTTGAATATAAACCAGAACTTCAGAAAGCAATGGAGTTTGTCTTTGGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 72 bp AGAATAATTGACTTAATATGCATTTTCGATACTGTCTaGGGTCAGCAAACCTCTGACAGGAATCAAACAGGC +
Preference number: 6 (lower is better)
Translates to: RIIDLICIFDTV*GQQTSDRNQTG
Trigger: GCCTGTTTGATTCCTGTCAGAGGTTTGCTGACCCAAGACAGTATCGAAAATGCATATTAAGTCAATTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 72 bp CTGAGCTTTACTTATATCATTTTTACAGGCCATCATTaGACCAGCAAGAGTTGCTTCTGCTCCATCTTCATT +
Preference number: 6 (lower is better)
Translates to: LSFTYIIFTGHH*TSKSCFCSIFI
Trigger: AATGAAGATGGAGCAGAAGCAACTCTTGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAAAGCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 72 bp CAGTTCTTCTCTGGATCCTTGTATGCAAATCGAAGATaGGGAAATCTGGCTAATAGAGCTTCATATGTTTCT +
Preference number: 6 (lower is better)
Translates to: QFFSGSLYANRR*GNLANRASYVS
Trigger: AGAAACATATGAAGCTCTATTAGCCAGATTTCCCAATCTTCGATTTGCATACAAGGATCCAGAGAAGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS GCA 72 bp AGAATCATTGTTTTGCTCCTTGTGTTTTGCCACTTCTaGATATTTAGCTTTAATTACAGTGTCTTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: RIIVLLLVFCHF*IFSFNYSVLGC
Trigger: ACAGCCCAAGACACTGTAATTAAAGCTAAATATGCAGAAGTGGCAAAACACAAGGAGCAAAACAATGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8
CDS CAA 72 bp ATAGGATTTGATAGCTTCATTTACAGCTTCAAGCTGTaGTTTGTAAGATGTATGCTCTCTCTTGAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: IGFDSFIYSFKL*FVRCMLSLELF
Trigger: GAAGAGCTCAAGAGAGAGCATACATCTTACAAACAACAGCTTGAAGCTGTAAATGAAGCTATCAAATCCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286398.11
ENST00000374787.7
ENST00000374793.8