Pregenerated sensors for SMARCAL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000138375Ensembl transcript IDs: ENST00000357276.9, ENST00000358207.9, ENST00000392128.6, ENST00000412913.1, ENST00000427645.5, ENST00000430374.5, ENST00000434435.1, ENST00000444508.5, ENST00000445153.1, ENST00000479008.1, ENST00000486983.1, ENST00000496037.1
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCAGGCGCGACTGCAGAGCCTCCCGAGCGGGACCGGTCTTCCGAGTaGACGGTTAGGCCACGGGTATTCAAGCGCTGCGAGTTCGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PGATAEPPERDRSSE*TVRPRVFKRCEFAS Trigger: GCTGGCGAACTCGCAGCGCTTGAATACCCGTGGCCTAACCGTCCACTCGGAAGACCGGTCCCGCTCGGGAGGCTCTGCAGTCGCGCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000430374.5 ENST00000444508.5 |
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| CDS GCA 90 bp | CCTTTGCCACGAGGTAGTGAATGCCCACGGAGCTGGTCTGTCCAATaGGGTGCACGCGGTCCTCAGCCTGGATCAGCACCCCTGGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: PLPRGSECPRSWSVQ*GARGPQPGSAPLGS Trigger: GGAACCCAGGGGTGCTGATCCAGGCTGAGGACCGCGTGCACCGCATTGGACAGACCAGCTCCGTGGGCATTCACTACCTCGTGGCAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS GCA 90 bp | AGGCAGCTGGGAAAGGACGTCGGACTTGAGGCGCCGCAGCATGACTaGTTCCTCCAGCAGGAGCTTCAGCTCTCCCAGGTTGGAGGAACC | + |
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Preference number: 5 (lower is better) Translates to: RQLGKDVGLEAPQHD*FLQQELQLSQVGGT Trigger: GGTTCCTCCAACCTGGGAGAGCTGAAGCTCCTGCTGGAGGAAGCAGTCATGCTGCGGCGCCTCAAGTCCGACGTCCTTTCCCAGCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
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| CDS GCA 90 bp | GTGATGGACAGCACGGCCACAGCATGCCTCTCCGACAGTTGGAACTaGTGGCACAGGTCCTCCCGCTCAGCTGATGAGGTGGAGCCATCG | + |
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Preference number: 5 (lower is better) Translates to: VMDSTATACLSDSWN*WHRSSRSADEVEPS Trigger: CGATGGCTCCACCTCATCAGCTGAGCGGGAGGACCTGTGCCAGCAGTTCCAACTGTCGGAGAGGCATGCTGTGGCCGTGCTGTCCATCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS CCA 90 bp | AAAGGGATGGAGCTGATGGAAGGCCGGCCTGTCCCTCACTGCTGGTaGAGGGTGACTCGCTGCTGCCATAGGCCCATTCCAGAGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: KGMELMEGRPVPHCW*RVTRCCHRPIPEAA Trigger: TGCAGCCTCTGGAATGGGCCTATGGCAGCAGCGAGTCACCCTCCACCAGCAGTGAGGGACAGGCCGGCCTTCCATCAGCTCCATCCCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS CCA 90 bp | CGTCCTGGGGCAATCACCACTATCTTGCGCTGCTTGGCAGGCAGCTaGGAAAGGACGTCGGACTTGAGGCGCCGCAGCATGACTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RPGAITTILRCLAGS*ERTSDLRRRSMTAS Trigger: GGAAGCAGTCATGCTGCGGCGCCTCAAGTCCGACGTCCTTTCCCAGCTGCCTGCCAAGCAGCGCAAGATAGTGGTGATTGCCCCAGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
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| CDS CCA 90 bp | GGCTGCAGCATCCAGGGCAGCTCTGGTCCTGGCATTGATCCGTCCTaGGGCAATCACCACTATCTTGCGCTGCTTGGCAGGCAGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: GCSIQGSSGPGIDPS*GNHHYLALLGRQLG Trigger: TCCCAGCTGCCTGCCAAGCAGCGCAAGATAGTGGTGATTGCCCCAGGACGGATCAATGCCAGGACCAGAGCTGCCCTGGATGCTGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
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| CDS GCA 90 bp | GACCGGTCTTCCGAGTGGACGGTTAGGCCACGGGTATTCAAGCGCTaGGAGTTCGCCAGCCTTATTGTAGCGGCCAGGCCTGAAGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: DRSSEWTVRPRVFKR*EFASLIVAARPEGL Trigger: TAGCCCTTCAGGCCTGGCCGCTACAATAAGGCTGGCGAACTCGCAGCGCTTGAATACCCGTGGCCTAACCGTCCACTCGGAAGACCGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430374.5 |
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| CDS CCA 90 bp | ATGAAAGGGATGGAGCTGATGGAAGGCCGGCCTGTCCCTCACTGCTaGTGGAGGGTGACTCGCTGCTGCCATAGGCCCATTCCAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: MKGMELMEGRPVPHC*WRVTRCCHRPIPEA Trigger: AGCCTCTGGAATGGGCCTATGGCAGCAGCGAGTCACCCTCCACCAGCAGTGAGGGACAGGCCGGCCTTCCATCAGCTCCATCCCTTTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS CCA 90 bp | AGCTGTCAGGCGGTCCTTCCCAGTCACCACGACGTTGATGCAATCTaGGCTCAGAGATGGCAGCCACCGAAGGAAGGCCTGCTCCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SCQAVLPSHHDVDAI*AQRWQPPKEGLLPG Trigger: ACCTGGGAGCAGGCCTTCCTTCGGTGGCTGCCATCTCTGAGCCCAGATTGCATCAACGTCGTGGTGACTGGGAAGGACCGCCTGACAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000445153.1 |
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| CDS CCA 90 bp | CATCAGCTGTGCCCTTTGCCACGAGGTAGTGAATGCCCACGGAGCTaGTCTGTCCAATGCGGTGCACGCGGTCCTCAGCCTGGATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: HQLCPLPRGSECPRS*SVQCGARGPQPGSA Trigger: TGCTGATCCAGGCTGAGGACCGCGTGCACCGCATTGGACAGACCAGCTCCGTGGGCATTCACTACCTCGTGGCAAAGGGCACAGCTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS TCA 90 bp | AGGGTGACTCGCTGCTGCCATAGGCCCATTCCAGAGGCTGCAGGTTaGCCGTGGGGAGGCTCTGGGCTGCTTTCATCAGGGCACTATAGT | + |
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Preference number: 5 (lower is better) Translates to: RVTRCCHRPIPEAAG*PWGGSGLLSSGHYS Trigger: ACTATAGTGCCCTGATGAAAGCAGCCCAGAGCCTCCCCACGGTCAACCTGCAGCCTCTGGAATGGGCCTATGGCAGCAGCGAGTCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS GCA 90 bp | CAAATGAAAGGGATGGAGCTGATGGAAGGCCGGCCTGTCCCTCACTaGTGGTGGAGGGTGACTCGCTGCTGCCATAGGCCCATTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: QMKGMELMEGRPVPH*WWRVTRCCHRPIPE Trigger: CTCTGGAATGGGCCTATGGCAGCAGCGAGTCACCCTCCACCAGCAGTGAGGGACAGGCCGGCCTTCCATCAGCTCCATCCCTTTCATTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS GCA 90 bp | GGGGAAGAAAGTTGGCTTGACTGCGATGATCTGCGTGTAGAGCTCTaGGGGCCGGGACATGGCTGGTGTGCCCGACAACAGGATCACCCT | + |
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Preference number: 5 (lower is better) Translates to: GEESWLDCDDLRVEL*GPGHGWCARQQDHP Trigger: AGGGTGATCCTGTTGTCGGGCACACCAGCCATGTCCCGGCCCGCAGAGCTCTACACGCAGATCATCGCAGTCAAGCCAACTTTCTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS TCA 90 bp | GCCTCTGGGACATCTGGCGTGAGACTGAGAGATGTCTTCTTGAGCTaGGAAGCAAACGCCAGGGTGAGAGTCGTGGGCAGAGGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASGTSGVRLRDVFLS*EANARVRVVGRGSS Trigger: GCTGGACCCTCTGCCCACGACTCTCACCCTGGCGTTTGCTTCTCAGCTCAAGAAGACATCTCTCAGTCTCACGCCAGATGTCCCAGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 ENST00000479008.1 |
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| CDS TCA 90 bp | TGCTTCCTCCAGCAGGAGCTTCAGCTCTCCCAGGTTGGAGGAACCTaGGTAGTCCCACCCCCAAGGCATCCGTTTGGCATCACAGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: CFLQQELQLSQVGGT*VVPPPRHPFGITVA Trigger: CGCTACTGTGATGCCAAACGGATGCCTTGGGGGTGGGACTACTCAGGTTCCTCCAACCTGGGAGAGCTGAAGCTCCTGCTGGAGGAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
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| CDS CCA 90 bp | GACTGCGATGATCTGCGTGTAGAGCTCTGCGGGCCGGGACATGGCTaGTGTGCCCGACAACAGGATCACCCTCTTGGCAACAATGATGAC | + |
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Preference number: 5 (lower is better) Translates to: DCDDLRVELCGPGHG*CARQQDHPLGNNDD Trigger: GTCATCATTGTTGCCAAGAGGGTGATCCTGTTGTCGGGCACACCAGCCATGTCCCGGCCCGCAGAGCTCTACACGCAGATCATCGCAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392128.6 |
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| CDS CCA 90 bp | AGACTCCCTTGGGAAATTTTGGGATGGGCCTTGCTTGGCCTGGAATaGGTTGCCAGCAATGGAGGTGCCCGAGCTAGTCCTCTGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: RLPWEILGWALLGLE*VASNGGARASPLML Trigger: CAGCATCAGAGGACTAGCTCGGGCACCTCCATTGCTGGCAACCCATTCCAGGCCAAGCAAGGCCCATCCCAAAATTTCCCAAGGGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
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| CDS GCA 90 bp | CTTCTCTTGAATCAGGGGCCAAAGGTAGTCATCAGCTGTGCCCTTTaGCACGAGGTAGTGAATGCCCACGGAGCTGGTCTGTCCAATGCG | + |
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Preference number: 5 (lower is better) Translates to: LLLNQGPKVVISCAL*HEVVNAHGAGLSNA Trigger: CGCATTGGACAGACCAGCTCCGTGGGCATTCACTACCTCGTGGCAAAGGGCACAGCTGATGACTACCTTTGGCCCCTGATTCAAGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS CCA 90 bp | AAACGCCAGGGTGAGAGTCGTGGGCAGAGGGTCCAGCTGAACTTGTaGGAGGCAGCGCACCTTTGCAACATATCTTCTGGAATCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: KRQGESRGQRVQLNL*EAAHLCNISSGIHL Trigger: CAGATGGATTCCAGAAGATATGTTGCAAAGGTGCGCTGCCTCCCACAAGTTCAGCTGGACCCTCTGCCCACGACTCTCACCCTGGCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427645.5 |
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| CDS GCA 90 bp | GGGCATCAGATTAGACACGAGCTTGGGGTCCACTTCAGAAAGGTCTaGCTCTGGGACATCTGGCGTGAGACTGAGAGATGTCTTCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: GHQIRHELGVHFRKV*LWDIWRETERCLLE Trigger: CTCAAGAAGACATCTCTCAGTCTCACGCCAGATGTCCCAGAGGCAGACCTTTCTGAAGTGGACCCCAAGCTCGTGTCTAATCTGATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 ENST00000479008.1 |
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| CDS GCA 90 bp | TTTCTGCTGCTGTTTAGTTTTGTCCTTGGTGGTCATTTCCTTGGCTaGAGCATCCAGGGCAGCTCTGGTCCTGGCATTGATCCGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FLLLFSFVLGGHFLG*SIQGSSGPGIDPSW Trigger: CCAGGACGGATCAATGCCAGGACCAGAGCTGCCCTGGATGCTGCAGCCAAGGAAATGACCACCAAGGACAAAACTAAACAGCAGCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS CCA 90 bp | ATGACACCATGGCTCACTGGCTTACAAGACTCCCTTGGGAAATTTTaGGATGGGCCTTGCTTGGCCTGGAATGGGTTGCCAGCAATGGAG | + |
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Preference number: 5 (lower is better) Translates to: MTPWLTGLQDSLGKF*DGPCLAWNGLPAME Trigger: CTCCATTGCTGGCAACCCATTCCAGGCCAAGCAAGGCCCATCCCAAAATTTCCCAAGGGAGTCTTGTAAGCCAGTGAGCCATGGTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
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| CDS TCA 90 bp | GGAGGCTCTGGGCTGCTTTCATCAGGGCACTATAGTCATTCATGCTaGAGTTCCACGTCTTGGTGTCAGGATCTAAGAGGACTGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GGSGLLSSGHYSHSC*SSTSWCQDLRGLRA Trigger: TGCCCTCAGTCCTCTTAGATCCTGACACCAAGACGTGGAACTTCAGCATGAATGACTATAGTGCCCTGATGAAAGCAGCCCAGAGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412913.1 |
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| CDS CCA 90 bp | CAGATTAGACACGAGCTTGGGGTCCACTTCAGAAAGGTCTGCCTCTaGGACATCTGGCGTGAGACTGAGAGATGTCTTCTTGAGCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: QIRHELGVHFRKVCL*DIWRETERCLLELR Trigger: TCTCAGCTCAAGAAGACATCTCTCAGTCTCACGCCAGATGTCCCAGAGGCAGACCTTTCTGAAGTGGACCCCAAGCTCGTGTCTAATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 ENST00000479008.1 |
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| CDS TCA 90 bp | ATCAACACCTGGAAACGATCGCCGTTCCTTACGCACTTTCCCTTCTaGGAGTTCACTCCTTTTTGGACTGAGGACCCTGACTTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: INTWKRSPFLTHFPF*EFTPFWTEDPDFCW Trigger: CCAGCAGAAGTCAGGGTCCTCAGTCCAAAAAGGAGTGAACTCTCAGAAGGGAAAGTGCGTAAGGAACGGCGATCGTTTCCAGGTGTTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS TCA 90 bp | AACATAGTCTTTTTCCAACCAGAGAGACTCGGCCATAAGACCCACTaGTCAGCCCCAAACCATAAATCCATTCCGCCACATGGACGCCCC | + |
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Preference number: 5 (lower is better) Translates to: NIVFFQPERLGHKTH*SAPNHKSIPPHGRP Trigger: GGGGCGTCCATGTGGCGGAATGGATTTATGGTTTGGGGCTGATCAGTGGGTCTTATGGCCGAGTCTCTCTGGTTGGAAAAAGACTATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434435.1 |
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| CDS TCA 90 bp | GGAGGCTCTGGGCTGCTTTCATCAGGGCACTATAGTCATTCATGCTaGAGTTCCACGTCTTGGTGTCAGGATCATAATTCTTGCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GGSGLLSSGHYSHSC*SSTSWCQDHNSCWA Trigger: TGCCCAGCAAGAATTATGATCCTGACACCAAGACGTGGAACTTCAGCATGAATGACTATAGTGCCCTGATGAAAGCAGCCCAGAGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS GCA 90 bp | CTCATAACTCAAGAGCTGTTGTTTAGGGACCTCTGGAGGACTTTGTaGCAAGGGAGGAGAGATTCCAGTGAGAGCCATTTGACTACGTGG | + |
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Preference number: 5 (lower is better) Translates to: LITQELLFRDLWRTL*QGRRDSSESHLTTW Trigger: CCACGTAGTCAAATGGCTCTCACTGGAATCTCTCCTCCCTTGGCACAAAGTCCTCCAGAGGTCCCTAAACAACAGCTCTTGAGTTATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000427645.5 ENST00000430374.5 |
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| CDS TCA 90 bp | CCTGACAACGACTGTCTCTACTGTCCTTTCCCTGGTACTAGGAGATaGCAGACGTGTTGTCGGCTTCGTGAGTCATCTAGAAGTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: PDNDCLYCPFPGTRR*QTCCRLRESSRSHF Trigger: GAAATGACTTCTAGATGACTCACGAAGCCGACAACACGTCTGTCATCTCCTAGTACCAGGGAAAGGACAGTAGAGACAGTCGTTGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479008.1 |
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| CDS CCA 90 bp | AGCGCACCTTTGCAACTGATGAAAGCTAAGAAAGGGCTGATGAACTaGCTGGTAGAAAAGGCAGGGCTTTGTAAGCGTTATGTTCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: SAPLQLMKAKKGLMN*LVEKAGLCKRYVPS Trigger: CGAAGGAACATAACGCTTACAAAGCCCTGCCTTTTCTACCAGCCAGTTCATCAGCCCTTTCTTAGCTTTCATCAGTTGCAAAGGTGCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479008.1 |
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| CDS TCA 90 bp | TGTCTCCAAAATCCTATGCTGCTAGTTCAGCCATCTCAGTGTTCCTaGGAAAGACACCATTCCCTGACAACGACTGTCTCTACTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: CLQNPMLLVQPSQCS*ERHHSLTTTVSTVL Trigger: AAGGACAGTAGAGACAGTCGTTGTCAGGGAATGGTGTCTTTCTCAGGAACACTGAGATGGCTGAACTAGCAGCATAGGATTTTGGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479008.1 |
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| CDS GCA 90 bp | CTTGGTGTCAGGATCATAATTCTTGCTGGGCAGGGTCTTAAACACTaGAATGAGTTCCGCATTGTACCCAATCAACACCTGGAAACGATC | + |
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Preference number: 5 (lower is better) Translates to: LGVRIIILAGQGLKH*NEFRIVPNQHLETI Trigger: GATCGTTTCCAGGTGTTGATTGGGTACAATGCGGAACTCATTGCAGTGTTTAAGACCCTGCCCAGCAAGAATTATGATCCTGACACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS CCA 90 bp | AAAGGAAAGCTGAGAGAATGCCAGGTCATTTTCAAGGGCCTCTCATaGAAAGGAACACCTAGACATGTCTGCTTCCAAATCTGTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: KGKLRECQVIFKGLS*KGTPRHVCFQICLQ Trigger: CTGGAGACAGATTTGGAAGCAGACATGTCTAGGTGTTCCTTTCCATGAGAGGCCCTTGAAAATGACCTGGCATTCTCTCAGCTTTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486983.1 |
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| CDS TCA 90 bp | ACAGGATCACCCTCTTGGCAACCTTTATTTTCTGTAGCATATGCCTaGCGCCAAGTAACCAATAAATGTTCACCGTATGCTTTAGGACCG | + |
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Preference number: 5 (lower is better) Translates to: TGSPSWQPLFSVAYA*RQVTNKCSPYALGP Trigger: CGGTCCTAAAGCATACGGTGAACATTTATTGGTTACTTGGCGTCAGGCATATGCTACAGAAAATAAAGGTTGCCAAGAGGGTGATCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445153.1 |
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| CDS CCA 90 bp | TGCTTTCTCTCAAGCTCTTGCGTAATTGCGTCCAGGACCACCTTATaGTGTGCAAATACTAAAAACTTCTCTCTTCCACTTTCCAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: CFLSSSCVIASRTTL*CANTKNFSLPLSSR Trigger: CCTACTGGAAAGTGGAAGAGAGAAGTTTTTAGTATTTGCACACCATAAGGTGGTCCTGGACGCAATTACGCAAGAGCTTGAGAGAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS TCA 90 bp | ATATCTTCTGGAATCCATCTGTTTAAAAAGCGCAATAAGGTCCTGTaGATAACTGATGTCTGCCTCGAAGTAGGCCCTGGAGATGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: ISSGIHLFKKRNKVL*ITDVCLEVGPGDEH Trigger: ATGCTCATCTCCAGGGCCTACTTCGAGGCAGACATCAGTTATTCACAGGACCTTATTGCGCTTTTTAAACAGATGGATTCCAGAAGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS GCA 72 bp | GCCACATTCGCCCCCGGCCCTGACCCCAGGCGCGACTaGAGAGCCTCCCGAGCGGGACCGGTCTTCCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ATFAPGPDPRRD*RASRAGPVFRV Trigger: CACTCGGAAGACCGGTCCCGCTCGGGAGGCTCTGCAGTCGCGCCTGGGGTCAGGGCCGGGGGCGAATGTGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000357276.9 ENST00000444508.5 |
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| CDS GCA 72 bp | GGGATGGAGCTGATGGAAGGCCGGCCTGTCCCTCACTaGTGGTGGAGGGTGACTCGCTGCTGCCATAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GMELMEGRPVPH*WWRVTRCCHRP Trigger: GGGCCTATGGCAGCAGCGAGTCACCCTCCACCAGCAGTGAGGGACAGGCCGGCCTTCCATCAGCTCCATCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS TCA 72 bp | TGGAAGGCCGGCCTGTCCCTCACTGCTGGTGGAGGGTaGCTCGCTGCTGCCATAGGCCCATTCCAGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: WKAGLSLTAGGG*LAAAIGPFQRL Trigger: CAGCCTCTGGAATGGGCCTATGGCAGCAGCGAGTCACCCTCCACCAGCAGTGAGGGACAGGCCGGCCTTCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS CCA 72 bp | ACTGCAGAGCCTCCCGAGCGGGACCGGTCTTCCGAGTaGACGGTTAGGCCACGGGTATTCAAGCGCTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: TAEPPERDRSSE*TVRPRVFKRCE Trigger: CTCGCAGCGCTTGAATACCCGTGGCCTAACCGTCCACTCGGAAGACCGGTCCCGCTCGGGAGGCTCTGCAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000430374.5 ENST00000444508.5 |
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| CDS TCA 72 bp | CGCTGCTGCCATAGGCCCATTCCAGAGGCTGCAGGTTaGCCGTGGGGAGGCTCTGGGCTGCTTTCATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RCCHRPIPEAAG*PWGGSGLLSSG Trigger: CCCTGATGAAAGCAGCCCAGAGCCTCCCCACGGTCAACCTGCAGCCTCTGGAATGGGCCTATGGCAGCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS GCA 72 bp | CGAGGTAGTGAATGCCCACGGAGCTGGTCTGTCCAATaGGGTGCACGCGGTCCTCAGCCTGGATCAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: RGSECPRSWSVQ*GARGPQPGSAP Trigger: GGGTGCTGATCCAGGCTGAGGACCGCGTGCACCGCATTGGACAGACCAGCTCCGTGGGCATTCACTACCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS CAA 90 bp | CTGGCATTGATCCGTCCTGGGGCAATCACCACTATCTTGCGCTGCTaGGCAGGCAGCTGGGAAAGGACGTCGGACTTGAGGCGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LALIRPGAITTILRC*AGSWERTSDLRRRS Trigger: GCTGCGGCGCCTCAAGTCCGACGTCCTTTCCCAGCTGCCTGCCAAGCAGCGCAAGATAGTGGTGATTGCCCCAGGACGGATCAATGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
||
| CDS CCA 72 bp | ATGGAGCTGATGGAAGGCCGGCCTGTCCCTCACTGCTaGTGGAGGGTGACTCGCTGCTGCCATAGGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: MELMEGRPVPHC*WRVTRCCHRPI Trigger: AATGGGCCTATGGCAGCAGCGAGTCACCCTCCACCAGCAGTGAGGGACAGGCCGGCCTTCCATCAGCTCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
||
| CDS CCA 72 bp | TGCCCTTTGCCACGAGGTAGTGAATGCCCACGGAGCTaGTCTGTCCAATGCGGTGCACGCGGTCCTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CPLPRGSECPRS*SVQCGARGPQP Trigger: AGGCTGAGGACCGCGTGCACCGCATTGGACAGACCAGCTCCGTGGGCATTCACTACCTCGTGGCAAAGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
||
| CDS GCA 72 bp | GCGTGTAGAGCTCTGCGGGCCGGGACATGGCTGGTGTaGCCGACAACAGGATCACCCTCTTGGCAACCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ACRALRAGTWLV*PTTGSPSWQPL Trigger: TAAAGGTTGCCAAGAGGGTGATCCTGTTGTCGGGCACACCAGCCATGTCCCGGCCCGCAGAGCTCTACACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357276.9 ENST00000358207.9 |
||
| CDS GCA 72 bp | TCCGAGTGGACGGTTAGGCCACGGGTATTCAAGCGCTaGGAGTTCGCCAGCCTTATTGTAGCGGCCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SEWTVRPRVFKR*EFASLIVAARP Trigger: AGGCCTGGCCGCTACAATAAGGCTGGCGAACTCGCAGCGCTTGAATACCCGTGGCCTAACCGTCCACTCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357276.9 ENST00000430374.5 |
||
| CDS CCA 72 bp | GCGGTCCTTCCCAGTCACCACGACGTTGATGCAATCTaGGCTCAGAGATGGCAGCCACCGAAGGAAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVLPSHHDVDAI*AQRWQPPKEGL Trigger: CAGGCCTTCCTTCGGTGGCTGCCATCTCTGAGCCCAGATTGCATCAACGTCGTGGTGACTGGGAAGGACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000445153.1 |
||
| CDS CCA 72 bp | CTGCTTCCTCCAGCAGGAGCTTCAGCTCTCCCAGGTTaGAGGAACCTGAGTAGTCCCACCCCCAAGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LLPPAGASALPG*RNLSSPTPKAS Trigger: GGATGCCTTGGGGGTGGGACTACTCAGGTTCCTCCAACCTGGGAGAGCTGAAGCTCCTGCTGGAGGAAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
||
| CDS CCA 72 bp | ATGGACAGCACGGCCACAGCATGCCTCTCCGACAGTTaGAACTGCTGGCACAGGTCCTCCCGCTCAGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: MDSTATACLSDS*NCWHRSSRSAD Trigger: ATCAGCTGAGCGGGAGGACCTGTGCCAGCAGTTCCAACTGTCGGAGAGGCATGCTGTGGCCGTGCTGTCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
||
| CDS CAA 72 bp | CCAGCTGTCAGGCGGTCCTTCCCAGTCACCACGACGTaGATGCAATCTGGGCTCAGAGATGGCAGCCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: PAVRRSFPVTTT*MQSGLRDGSHR Trigger: TCGGTGGCTGCCATCTCTGAGCCCAGATTGCATCAACGTCGTGGTGACTGGGAAGGACCGCCTGACAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000445153.1 |
||
| CDS CAA 90 bp | TTGATCAGGCCAGCTGTCAGGCGGTCCTTCCCAGTCACCACGACGTaGATGCAATCTGGGCTCAGAGATGGCAGCCACCGAAGGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LIRPAVRRSFPVTTT*MQSGLRDGSHRRKA Trigger: GGCCTTCCTTCGGTGGCTGCCATCTCTGAGCCCAGATTGCATCAACGTCGTGGTGACTGGGAAGGACCGCCTGACAGCTGGCCTGATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000445153.1 |
||
| CDS TCA 72 bp | TGTGCCAAGGGAGGAGAGATTCCAGTGAGAGCCATTTaGCTACGTGGACTGTGGCCTGGGCAGGCTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CAKGGEIPVRAI*LRGLWPGQAVG Trigger: GCCCACAGCCTGCCCAGGCCACAGTCCACGTAGTCAAATGGCTCTCACTGGAATCTCTCCTCCCTTGGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000427645.5 ENST00000430374.5 ENST00000444508.5 |
||
| CDS TCA 72 bp | CAGCTGTCAGGCGGTCCTTCCCAGTCACCACGACGTTaGTGCAATCTGGGCTCAGAGATGGCAGCCACCGAA | + |
|
Preference number: 6 (lower is better) Translates to: QLSGGPSQSPRR*CNLGSEMAATE Trigger: TTCGGTGGCTGCCATCTCTGAGCCCAGATTGCATCAACGTCGTGGTGACTGGGAAGGACCGCCTGACAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000445153.1 |
||
| CDS GCA 72 bp | ATATTGGCAGCGGTGATGGACAGCACGGCCACAGCATaGCTCTCCGACAGTTGGAACTGCTGGCACAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILAAVMDSTATA*LSDSWNCWHRS Trigger: GGACCTGTGCCAGCAGTTCCAACTGTCGGAGAGGCATGCTGTGGCCGTGCTGTCCATCACCGCTGCCAATAT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
||
| CDS CCA 72 bp | ATCCAGGGCAGCTCTGGTCCTGGCATTGATCCGTCCTaGGGCAATCACCACTATCTTGCGCTGCTTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IQGSSGPGIDPS*GNHHYLALLGR Trigger: CCTGCCAAGCAGCGCAAGATAGTGGTGATTGCCCCAGGACGGATCAATGCCAGGACCAGAGCTGCCCTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
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| CDS CAA 72 bp | CTGGCATTGATCCGTCCTGGGGCAATCACCACTATCTaGCGCTGCTTGGCAGGCAGCTGGGAAAGGACGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LALIRPGAITTI*RCLAGSWERTS Trigger: CGACGTCCTTTCCCAGCTGCCTGCCAAGCAGCGCAAGATAGTGGTGATTGCCCCAGGACGGATCAATGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
||
| CDS CAA 90 bp | GTCATTTCCTTGGCTGCAGCATCCAGGGCAGCTCTGGTCCTGGCATaGATCCGTCCTGGGGCAATCACCACTATCTTGCGCTGCTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VISLAAASRAALVLA*IRPGAITTILRCLA Trigger: TGCCAAGCAGCGCAAGATAGTGGTGATTGCCCCAGGACGGATCAATGCCAGGACCAGAGCTGCCCTGGATGCTGCAGCCAAGGAAATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000486983.1 |
||
| CDS CCA 72 bp | AGTCACCACGACGTTGATGCAATCTGGGCTCAGAGATaGCAGCCACCGAAGGAAGGCCTGCTCCCAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SHHDVDAIWAQR*QPPKEGLLPGE Trigger: TTCACCTGGGAGCAGGCCTTCCTTCGGTGGCTGCCATCTCTGAGCCCAGATTGCATCAACGTCGTGGTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000445153.1 |
||
| CDS CAA 72 bp | TTGTGCCAAGGGAGGAGAGATTCCAGTGAGAGCCATTaGACTACGTGGACTGTGGCCTGGGCAGGCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LCQGRRDSSESH*TTWTVAWAGCG Trigger: CCCACAGCCTGCCCAGGCCACAGTCCACGTAGTCAAATGGCTCTCACTGGAATCTCTCCTCCCTTGGCACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000427645.5 ENST00000430374.5 ENST00000444508.5 |
||
| CDS TCA 72 bp | GGGTTGCCAGCAATGGAGGTGCCCGAGCTAGTCCTCTaGTGCTGTTCTGCCAATAACTTCTCAGCTCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPAMEVPELVL*CCSANNFSALR Trigger: CCGCAGAGCTGAGAAGTTATTGGCAGAACAGCATCAGAGGACTAGCTCGGGCACCTCCATTGCTGGCAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
||
| CDS GCA 72 bp | AATCAGGGGCCAAAGGTAGTCATCAGCTGTGCCCTTTaGCACGAGGTAGTGAATGCCCACGGAGCTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NQGPKVVISCAL*HEVVNAHGAGL Trigger: CAGACCAGCTCCGTGGGCATTCACTACCTCGTGGCAAAGGGCACAGCTGATGACTACCTTTGGCCCCTGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
||
| CDS CCA 72 bp | TGGGAAATTTTGGGATGGGCCTTGCTTGGCCTGGAATaGGTTGCCAGCAATGGAGGTGCCCGAGCTAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WEILGWALLGLE*VASNGGARASP Trigger: AGGACTAGCTCGGGCACCTCCATTGCTGGCAACCCATTCCAGGCCAAGCAAGGCCCATCCCAAAATTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
||
| CDS CCA 72 bp | TCCCTTGGGAAATTTTGGGATGGGCCTTGCTTGGCCTaGAATGGGTTGCCAGCAATGGAGGTGCCCGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLGKFWDGPCLA*NGLPAMEVPEL Trigger: TAGCTCGGGCACCTCCATTGCTGGCAACCCATTCCAGGCCAAGCAAGGCCCATCCCAAAATTTCCCAAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
||
| CDS CCA 72 bp | GGGAGGAGAGATTCCAGTGAGAGCCATTTGACTACGTaGACTGTGGCCTGGGCAGGCTGTGGGCATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GRRDSSESHLTT*TVAWAGCGHFF Trigger: GAAGAAATGCCCACAGCCTGCCCAGGCCACAGTCCACGTAGTCAAATGGCTCTCACTGGAATCTCTCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000427645.5 ENST00000430374.5 ENST00000444508.5 |
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| CDS CCA 72 bp | GGTGAGAGTCGTGGGCAGAGGGTCCAGCTGAACTTGTaGGAGGCAGCGCACCTTTGCAACATATCTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GESRGQRVQLNL*EAAHLCNISSG Trigger: TCCAGAAGATATGTTGCAAAGGTGCGCTGCCTCCCACAAGTTCAGCTGGACCCTCTGCCCACGACTCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427645.5 |
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| CDS CCA 72 bp | CTGTCTCCAGCCCTGGACTCACAGTTTTGTCCTTGGTaGTCATTTCCTTGGCTGCAGCATCCAGGGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSPALDSQFCPW*SFPWLQHPGQL Trigger: GAGCTGCCCTGGATGCTGCAGCCAAGGAAATGACCACCAAGGACAAAACTGTGAGTCCAGGGCTGGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486983.1 |
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| CDS CAA 90 bp | TGGAGGACTTTGTGCCAAGGGAGGAGAGATTCCAGTGAGAGCCATTaGACTACGTGGACTGTGGCCTGGGCAGGCTGTGGGCATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WRTLCQGRRDSSESH*TTWTVAWAGCGHFF Trigger: GAAGAAATGCCCACAGCCTGCCCAGGCCACAGTCCACGTAGTCAAATGGCTCTCACTGGAATCTCTCCTCCCTTGGCACAAAGTCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000427645.5 ENST00000430374.5 |
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| CDS CAA 90 bp | AGCAAACGCCAGGGTGAGAGTCGTGGGCAGAGGGTCCAGCTGAACTaGTGGGAGGCAGCGCACCTTTGCAACATATCTTCTGGAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SKRQGESRGQRVQLN*WEAAHLCNISSGIH Trigger: ATGGATTCCAGAAGATATGTTGCAAAGGTGCGCTGCCTCCCACAAGTTCAGCTGGACCCTCTGCCCACGACTCTCACCCTGGCGTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427645.5 |
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| CDS CAA 90 bp | TCTTCTCTTGAATCAGGGGCCAAAGGTAGTCATCAGCTGTGCCCTTaGCCACGAGGTAGTGAATGCCCACGGAGCTGGTCTGTCCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLESGAKGSHQLCP*PRGSECPRSWSVQC Trigger: GCATTGGACAGACCAGCTCCGTGGGCATTCACTACCTCGTGGCAAAGGGCACAGCTGATGACTACCTTTGGCCCCTGATTCAAGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS TCA 72 bp | ACATCTGGCGTGAGACTGAGAGATGTCTTCTTGAGCTaGGAAGCAAACGCCAGGGTGAGAGTCGTGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TSGVRLRDVFLS*EANARVRVVGR Trigger: TCTGCCCACGACTCTCACCCTGGCGTTTGCTTCTCAGCTCAAGAAGACATCTCTCAGTCTCACGCCAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 ENST00000479008.1 |
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| CDS CCA 72 bp | GGGGTCCACTTCAGAAAGGTCTGCCTCTGGGACATCTaGCGTGAGACTGAGAGATGTCTTCTTGAGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GVHFRKVCLWDI*RETERCLLELR Trigger: TCTCAGCTCAAGAAGACATCTCTCAGTCTCACGCCAGATGTCCCAGAGGCAGACCTTTCTGAAGTGGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 ENST00000479008.1 |
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| CDS CCA 72 bp | CACGAGCTTGGGGTCCACTTCAGAAAGGTCTGCCTCTaGGACATCTGGCGTGAGACTGAGAGATGTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HELGVHFRKVCL*DIWRETERCLL Trigger: AAGAAGACATCTCTCAGTCTCACGCCAGATGTCCCAGAGGCAGACCTTTCTGAAGTGGACCCCAAGCTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 ENST00000479008.1 |
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| CDS GCA 72 bp | GAGTTCACTCCTTTTTGGACTGAGGACCCTGACTTCTaGTGGAGTCTTCCTTCTGTCCTGGGCGTTACACTC | + |
|
Preference number: 6 (lower is better) Translates to: EFTPFWTEDPDF*WSLPSVLGVTL Trigger: GAGTGTAACGCCCAGGACAGAAGGAAGACTCCAGCAGAAGTCAGGGTCCTCAGTCCAAAAAGGAGTGAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS GCA 72 bp | ATTAGACACGAGCTTGGGGTCCACTTCAGAAAGGTCTaGCTCTGGGACATCTGGCGTGAGACTGAGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: IRHELGVHFRKV*LWDIWRETERC Trigger: ACATCTCTCAGTCTCACGCCAGATGTCCCAGAGGCAGACCTTTCTGAAGTGGACCCCAAGCTCGTGTCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 ENST00000479008.1 |
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| CDS CCA 72 bp | CACTGGCTTACAAGACTCCCTTGGGAAATTTTGGGATaGGCCTTGCTTGGCCTGGAATGGGTTGCCAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: HWLTRLPWEILG*ALLGLEWVASN Trigger: ATTGCTGGCAACCCATTCCAGGCCAAGCAAGGCCCATCCCAAAATTTCCCAAGGGAGTCTTGTAAGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
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| CDS CAA 90 bp | AATGACACCATGGCTCACTGGCTTACAAGACTCCCTTGGGAAATTTaGGGATGGGCCTTGCTTGGCCTGGAATGGGTTGCCAGCAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: NDTMAHWLTRLPWEI*GWALLGLEWVASNG Trigger: TCCATTGCTGGCAACCCATTCCAGGCCAAGCAAGGCCCATCCCAAAATTTCCCAAGGGAGTCTTGTAAGCCAGTGAGCCATGGTGTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
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| CDS TCA 72 bp | TGGAAACGATCGCCGTTCCTTACGCACTTTCCCTTCTaGGAGTTCACTCCTTTTTGGACTGAGGACCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: WKRSPFLTHFPF*EFTPFWTEDPD Trigger: GTCAGGGTCCTCAGTCCAAAAAGGAGTGAACTCTCAGAAGGGAAAGTGCGTAAGGAACGGCGATCGTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS GCA 72 bp | CAAGAGCTGTTGTTTAGGGACCTCTGGAGGACTTTGTaGCAAGGGAGGAGAGATTCCAGTGAGAGCCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: QELLFRDLWRTL*QGRRDSSESHL Trigger: CAAATGGCTCTCACTGGAATCTCTCCTCCCTTGGCACAAAGTCCTCCAGAGGTCCCTAAACAACAGCTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000427645.5 ENST00000430374.5 |
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| CDS CCA 72 bp | TTCACTCCTTTTTGGACTGAGGACCCTGACTTCTGCTaGAGTCTTCCTTCTGTCCTGGGCGTTACACTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FTPFWTEDPDFC*SLPSVLGVTLS Trigger: AGAGAGTGTAACGCCCAGGACAGAAGGAAGACTCCAGCAGAAGTCAGGGTCCTCAGTCCAAAAAGGAGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS CAA 72 bp | CTGGGCAGGGTCTTAAACACTGCAATGAGTTCCGCATaGTACCCAATCAACACCTGGAAACGATCGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGRVLNTAMSSA*YPINTWKRSPF Trigger: GAACGGCGATCGTTTCCAGGTGTTGATTGGGTACAATGCGGAACTCATTGCAGTGTTTAAGACCCTGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS CAA 90 bp | TTTAGCTGTTTTTCCAACTTGCTAAGAAGGTCAAAGCTGACAATGTaGATCAGGCCAGCTGTCAGGCGGTCCTTCCCAGTCACCACGACG | + |
|
Preference number: 6 (lower is better) Translates to: FSCFSNLLRRSKLTM*IRPAVRRSFPVTTT Trigger: CGTCGTGGTGACTGGGAAGGACCGCCTGACAGCTGGCCTGATCAACATTGTCAGCTTTGACCTTCTTAGCAAGTTGGAAAAACAGCTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000445153.1 |
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| CDS TCA 72 bp | CTGGAGTCTTCCTTCTGTCCTGGGCGTTACACTCTCTaGGCTAGAATGGATGTAAGAAATGTTCTGCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LESSFCPGRYTL*ARMDVRNVLPR Trigger: TCGGGGCAGAACATTTCTTACATCCATTCTAGCTCAGAGAGTGTAACGCCCAGGACAGAAGGAAGACTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
||
| CDS TCA 72 bp | GACTGTCTCTACTGTCCTTTCCCTGGTACTAGGAGATaGCAGACGTGTTGTCGGCTTCGTGAGTCATCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: DCLYCPFPGTRR*QTCCRLRESSR Trigger: TCTAGATGACTCACGAAGCCGACAACACGTCTGTCATCTCCTAGTACCAGGGAAAGGACAGTAGAGACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479008.1 |
||
| CDS CCA 72 bp | ACTGCAATGAGTTCCGCATTGTACCCAATCAACACCTaGAAACGATCGCCGTTCCTTACGCACTTTCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TAMSSALYPINT*KRSPFLTHFPF Trigger: GAAGGGAAAGTGCGTAAGGAACGGCGATCGTTTCCAGGTGTTGATTGGGTACAATGCGGAACTCATTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
||
| CDS TCA 72 bp | GTCTCTTGGGAACTCTTTGGTTTGGCCAGAGGCTTATaGGTTGGGTTAGCAAAGGGTGTGAACCTGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSWELFGLARGL*VGLAKGVNLIS Trigger: TGAGATCAGGTTCACACCCTTTGCTAACCCAACTCATAAGCCTCTGGCCAAACCAAAGAGTTCCCAAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
||
| CDS TCA 72 bp | GGGCTGCTTTCATCAGGGCACTATAGTCATTCATGCTaGAGTTCCACGTCTTGGTGTCAGGATCTAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLLSSGHYSHSC*SSTSWCQDLRG Trigger: TCCTCTTAGATCCTGACACCAAGACGTGGAACTTCAGCATGAATGACTATAGTGCCCTGATGAAAGCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412913.1 |
||
| CDS TCA 72 bp | TTTTTCCAACCAGAGAGACTCGGCCATAAGACCCACTaGTCAGCCCCAAACCATAAATCCATTCCGCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: FFQPERLGHKTH*SAPNHKSIPPH Trigger: ATGTGGCGGAATGGATTTATGGTTTGGGGCTGATCAGTGGGTCTTATGGCCGAGTCTCTCTGGTTGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434435.1 |
||
| CDS CCA 72 bp | TCCAGAGGAATGAGCTGGTGTCTCTTGGGAACTCTTTaGTTTGGCCAGAGGCTTATGAGTTGGGTTAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRGMSWCLLGTL*FGQRLMSWVSK Trigger: TTTGCTAACCCAACTCATAAGCCTCTGGCCAAACCAAAGAGTTCCCAAGAGACACCAGCTCATTCCTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS CCA 72 bp | GTCAATGAGCTTTCATCCAGGGTGTCTCCCATGTTCTaGGAACTACTTCCAGATGTTCCTGAAGCACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VNELSSRVSPMF*ELLPDVPEALP Trigger: AGGAAGTGCTTCAGGAACATCTGGAAGTAGTTCCCAGAACATGGGAGACACCCTGGATGAAAGCTCATTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS TCA 72 bp | AATCCTATGCTGCTAGTTCAGCCATCTCAGTGTTCCTaGGAAAGACACCATTCCCTGACAACGACTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NPMLLVQPSQCS*ERHHSLTTTVS Trigger: AGAGACAGTCGTTGTCAGGGAATGGTGTCTTTCTCAGGAACACTGAGATGGCTGAACTAGCAGCATAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479008.1 |
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| CDS CCA 72 bp | CTGAGAGAATGCCAGGTCATTTTCAAGGGCCTCTCATaGAAAGGAACACCTAGACATGTCTGCTTCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: LRECQVIFKGLS*KGTPRHVCFQI Trigger: GATTTGGAAGCAGACATGTCTAGGTGTTCCTTTCCATGAGAGGCCCTTGAAAATGACCTGGCATTCTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486983.1 |
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| CDS TCA 72 bp | GGGCTGCTTTCATCAGGGCACTATAGTCATTCATGCTaGAGTTCCACGTCTTGGTGTCAGGATCATAATTCT | + |
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Preference number: 6 (lower is better) Translates to: GLLSSGHYSHSC*SSTSWCQDHNS Trigger: AGAATTATGATCCTGACACCAAGACGTGGAACTTCAGCATGAATGACTATAGTGCCCTGATGAAAGCAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS TCA 72 bp | GGAATCCATCTGTTTAAAAAGCGCAATAAGGTCCTGTaGATAACTGATGTCTGCCTCGAAGTAGGCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GIHLFKKRNKVL*ITDVCLEVGPG Trigger: TCCAGGGCCTACTTCGAGGCAGACATCAGTTATTCACAGGACCTTATTGCGCTTTTTAAACAGATGGATTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000412913.1 ENST00000427645.5 |
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| CDS TCA 72 bp | ATGGTAACTCAATGGTTCGAAGCACTGCCAAAATGGTaGGTAACTCTTCTGATAACTCACATGGCCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: MVTQWFEALPKW*VTLLITHMAQP Trigger: TGGCTGGGCCATGTGAGTTATCAGAAGAGTTACTCACCATTTTGGCAGTGCTTCGAACCATTGAGTTACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496037.1 |
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| CDS GCA 72 bp | AGGATCATAATTCTTGCTGGGCAGGGTCTTAAACACTaGAATGAGTTCCGCATTGTACCCAATCAACACCTG | + |
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Preference number: 6 (lower is better) Translates to: RIIILAGQGLKH*NEFRIVPNQHL Trigger: CAGGTGTTGATTGGGTACAATGCGGAACTCATTGCAGTGTTTAAGACCCTGCCCAGCAAGAATTATGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 ENST00000427645.5 |
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| CDS CCA 72 bp | GAGATTCTGTTGCTTGAAAATGACACCATGGCTCACTaGCTTACAAGACTCCCTTGGGAAATTTTGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: EILLLENDTMAH*LTRLPWEILGW Trigger: CCATCCCAAAATTTCCCAAGGGAGTCTTGTAAGCCAGTGAGCCATGGTGTCATTTTCAAGCAACAGAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
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| CDS CAA 72 bp | TTTGAGGGATTCGGAATATTGATCACCACCCTGCTGTaGCCTGTGCTTATCTTTATGGCCATCCATCAACAG | + |
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Preference number: 6 (lower is better) Translates to: FEGFGILITTLL*PVLIFMAIHQQ Trigger: CTGTTGATGGATGGCCATAAAGATAAGCACAGGCAACAGCAGGGTGGTGATCAATATTCCGAATCCCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486983.1 |
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| CDS CAA 90 bp | TCCACATTCTTTGAGGGATTCGGAATATTGATCACCACCCTGCTGTaGCCTGTGCTTATCTTTATGGCCATCCATCAACAGCGATCTATA | + |
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Preference number: 6 (lower is better) Translates to: STFFEGFGILITTLL*PVLIFMAIHQQRSI Trigger: TATAGATCGCTGTTGATGGATGGCCATAAAGATAAGCACAGGCAACAGCAGGGTGGTGATCAATATTCCGAATCCCTCAAAGAATGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486983.1 |
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| CDS CCA 72 bp | TTGCAACTGATGAAAGCTAAGAAAGGGCTGATGAACTaGCTGGTAGAAAAGGCAGGGCTTTGTAAGCGTTAT | + |
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Preference number: 6 (lower is better) Translates to: LQLMKAKKGLMN*LVEKAGLCKRY Trigger: ATAACGCTTACAAAGCCCTGCCTTTTCTACCAGCCAGTTCATCAGCCCTTTCTTAGCTTTCATCAGTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479008.1 |
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| CDS CAA 72 bp | TGGTCAGCATTAGATGAGCTACTGAGATTCTGTTGCTaGAAAATGACACCATGGCTCACTGGCTTACAAGAC | + |
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Preference number: 6 (lower is better) Translates to: WSALDELLRFCC*KMTPWLTGLQD Trigger: GTCTTGTAAGCCAGTGAGCCATGGTGTCATTTTCAAGCAACAGAATCTCAGTAGCTCATCTAATGCTGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000430374.5 ENST00000434435.1 ENST00000444508.5 |
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| CDS TCA 72 bp | CCCTCTTGGCAACCTTTATTTTCTGTAGCATATGCCTaGCGCCAAGTAACCAATAAATGTTCACCGTATGCT | + |
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Preference number: 6 (lower is better) Translates to: PSWQPLFSVAYA*RQVTNKCSPYA Trigger: AGCATACGGTGAACATTTATTGGTTACTTGGCGTCAGGCATATGCTACAGAAAATAAAGGTTGCCAAGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445153.1 |
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| CDS CCA 72 bp | TCAAGCTCTTGCGTAATTGCGTCCAGGACCACCTTATaGTGTGCAAATACTAAAAACTTCTCTCTTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: SSSCVIASRTTL*CANTKNFSLPL Trigger: AAGTGGAAGAGAGAAGTTTTTAGTATTTGCACACCATAAGGTGGTCCTGGACGCAATTACGCAAGAGCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000357276.9 ENST00000358207.9 ENST00000392128.6 |
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| CDS CAA 72 bp | GACATAATTTCCACATTCTTTGAGGGATTCGGAATATaGATCACCACCCTGCTGTTGCCTGTGCTTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: DIISTFFEGFGI*ITTLLLPVLIF Trigger: AAAGATAAGCACAGGCAACAGCAGGGTGGTGATCAATATTCCGAATCCCTCAAAGAATGTGGAAATTATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486983.1 |
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| CDS TCA 72 bp | TTCTCAAAATATAGTAGACATAATTTCCACATTCTTTaGGGGATTCGGAATATTGATCACCACCCTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FSKYSRHNFHIL*GIRNIDHHPAV Trigger: AACAGCAGGGTGGTGATCAATATTCCGAATCCCTCAAAGAATGTGGAAATTATGTCTACTATATTTTGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486983.1 |
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