RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112305

Ensembl transcript IDs: ENST00000316999.9, ENST00000370452.7, ENST00000370455.8, ENST00000439432.1, ENST00000445046.1, ENST00000619054.4

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTaGGCTACCCAAGCTATTTCCTTCCCCTTCAGGTTCTCGTGTGGC +
Preference number: 1 (lower is better)
Translates to: FITLVLPDLECHHEE*ATQAISFPFRFSCG
Trigger: GCCACACGAGAACCTGAAGGGGAAGGAAATAGCTTGGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR TCA 90 bp AACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCTGAGAGTCTaGCCTGATGAGCTTCCAGACCATCCTGCTGTTGTGCTGGAGGGC +
Preference number: 1 (lower is better)
Translates to: NLYCSFHFHSCVLRV*PDELPDHPAVVLEG
Trigger: GCCCTCCAGCACAACAGCAGGATGGTCTGGAAGCTCATCAGGTCAGACTCTCAGCACACAACTGTGGAAATGAAAACTGCAATACAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR GCA 90 bp TGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACTTGTaGTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCAAG +
Preference number: 1 (lower is better)
Translates to: WNRKQITALRYSLHL*CPTSSVTMKSALPK
Trigger: CTTGGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR GCA 90 bp AACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTaGCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCAAGCTA +
Preference number: 1 (lower is better)
Translates to: NRKQITALRYSLHLC*PTSSVTMKSALPKL
Trigger: TAGCTTGGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR GCA 90 bp AAACAGATAACAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTaGACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGT +
Preference number: 1 (lower is better)
Translates to: KQITTVEELEPKANN*TKVFITLVLPDLEC
Trigger: ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTGTTATCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR TCA 90 bp GAACTAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATaGAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCTGAGA +
Preference number: 1 (lower is better)
Translates to: ELDAFQQGMSGGSSG*NLYCSFHFHSCVLR
Trigger: TCTCAGCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR CAA 90 bp AACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACTaGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCC +
Preference number: 2 (lower is better)
Translates to: NWNRKQITALRYSLH*CCPTSSVTMKSALP
Trigger: GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGATCCTGCTGTTGTGCTaGAGGGCTGGCCAAAACCTG +
Preference number: 2 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGILLLC*RAGQNL
Trigger: CAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGAT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR-3UTR TCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTCCTCGAGTGTCACCATaGAGAGTGCGCTACCCAAGC +
Preference number: 2 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRPRVSP*RVRYPS
Trigger: GCTTGGGTAGCGCACTCTTCATGGTGACACTCGAGG...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR GCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGCTTCCAGACCATCCTaGTGTTGTGCTGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWASRPS*CCAGGL
Trigger: CAGCCCTCCAGCACAACAGCAGGATGGTCTGGAAGC...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR-3UTR GCA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTGTACAGTGCCGATACTaGAAGATACCACTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: ANNCTKVFITLVLPDLECVQCRY*KIPLLS
Trigger: ACTCAAGAGTGGTATCTTGCAGTATCGGCACTGTAC...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTTGTGCTGGAGGGCTaGCCAAAACCTGCAGTAGGG +
Preference number: 2 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWVVLEG*PKPAVG
Trigger: CCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAAC...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR-3UTR TCA 90 bp CAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGGAGCAAAGCTGCCCTTaGCATAAAATGATTTATCAA +
Preference number: 2 (lower is better)
Translates to: QQLVQFVQPVDPYGRGCLEQSCP*HKMIYQ
Trigger: TTGATAAATCATTTTATGTCAAGGGCAGCTTTGCTC...CAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR TCA 90 bp CAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGACTGATTTTGCAAGTTaGGCAGCTTCTCAAATAATG +
Preference number: 2 (lower is better)
Translates to: QQLVQFVQPVDPYGRGCLTDFAS*AASQIM
Trigger: CATTATTTGAGAAGCTGCTCAACTTGCAAAATCAGT...CAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAACCATCCTGCTGTTGTaGTGGAGGGCTGGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVTILLL*WRAGQN
Trigger: GTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGGT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR CAA 90 bp CTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTaGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTT +
Preference number: 2 (lower is better)
Translates to: LVQFVQPVDPYGRGC*EFRLQSIQVLFVLL
Trigger: AAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR TCA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTTTCACCACATCAAATTaGATCAGTACAGACCAACAC +
Preference number: 2 (lower is better)
Translates to: ANNCTKVFITLVLPDLECFTTSN*ISTDQH
Trigger: GTGTTGGTCTGTACTGATTCAATTTGATGTGGTGAA...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR TCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGAAATCATGGGAAATATaGGCAAAGCTGCCCTTGACA +
Preference number: 2 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGKSWEI*AKLPLT
Trigger: TGTCAAGGGCAGCTTTGCTCATATTTCCCATGATTT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CCA 90 bp CAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGGGACATCTGTTTAAATaGAGCTTGTCAGTTAACATA +
Preference number: 2 (lower is better)
Translates to: QQLVQFVQPVDPYGRGCLGHLFK*SLSVNI
Trigger: TATGTTAACTGACAAGCTCCATTTAAACAGATGTCC...CAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR GCA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTTACACTAGAAAACAGTaGTCAGTGAGACATTTACAT +
Preference number: 2 (lower is better)
Translates to: ANNCTKVFITLVLPDLECYTRKQ*SVRHLH
Trigger: ATGTAAATGTCTCACTGAGCACTGTTTTCTAGTGTA...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR GCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTAGTACAGTGCCGATACTaGAAGATACCACTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: QQSKNWNRKQITALRYSLVQCRY*KIPLLS
Trigger: ACTCAAGAGTGGTATCTTGCAGTATCGGCACTGTAC...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTAAGTTTGTCCAGCCAGTaGATCCATATGGAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: QQSKNWNRKQITALRYSLSLSSQ*IHMEED
Trigger: ATCCTCTTCCATATGGATCCACTGGCTGGACAAACT...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR TCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCATTCACCACATCAAATTaGATCAGTACAGACCAACAC +
Preference number: 2 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAFTTSN*ISTDQH
Trigger: GTGTTGGTCTGTACTGATTCAATTTGATGTGGTGAA...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTTCACCACATCAAATTaGATCAGTACAGACCAACAC +
Preference number: 2 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMFTTSN*ISTDQH
Trigger: GTGTTGGTCTGTACTGATTCAATTTGATGTGGTGAA...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGGTGGTAGTTCTGGATaGAACTTGTATTGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMGGSSG*NLYCSF
Trigger: AAAACTGCAATACAAGTTTCATCCAGAACTACCACC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAACTGATTTTGCAAGTTaGGCAGCTTCTCAAATAATG +
Preference number: 2 (lower is better)
Translates to: QGLKIESGFVLVSYPVCITDFAS*AASQIM
Trigger: CATTATTTGAGAAGCTGCTCAACTTGCAAAATCAGT...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCAGCAACTGGTGCAGTTaGTCCAGCCAGTGGATCCAT +
Preference number: 3 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPSNWCS*SSQWIH
Trigger: ATGGATCCACTGGCTGGACAAACTGCACCAGTTGCT...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR TCA 72 bp CATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATaGAGAGTGCGCTACCCAAGCTATTTCCTTCCCCTT +
Preference number: 3 (lower is better)
Translates to: HYTCAARPRVSP*RVRYPSYFLPL
Trigger: AAGGGGAAGGAAATAGCTTGGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCAAATTGAGGTATAAATaGAAGCAGCAACTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPKLRYK*KQQLVQ
Trigger: CTGCACCAGTTGCTGCTTCAATTTATACCTCAATTT...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR TCA 72 bp TGCAGTTTTCATTTCCACAGTTGTGTGCTGAGAGTCTaGCCTGATGAGCTTCCAGACCATCCTGCTGTTGTG +
Preference number: 3 (lower is better)
Translates to: CSFHFHSCVLRV*PDELPDHPAVV
Trigger: CACAACAGCAGGATGGTCTGGAAGCTCATCAGGTCAGACTCTCAGCACACAACTGTGGAAATGAAAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATCAGACCATCCTGCTGTaGTGCTGGAGGGCTGGCCAA +
Preference number: 3 (lower is better)
Translates to: PHQIESVQTNTVNQIILNQTILL*CWRAGQ
Trigger: TTGGCCAGCCCTCCAGCACAACAGCAGGATGGTCTG...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370452.7
3UTR GCA 72 bp CAAATAACTGCACTAAGGTATTCATTACACTTGTGCTaGCCGACCTCGAGTGTCACCATGAAGAGTGCGCTA +
Preference number: 3 (lower is better)
Translates to: QITALRYSLHLC*PTSSVTMKSAL
Trigger: TAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR GCA 72 bp AAGCAAATAACTGCACTAAGGTATTCATTACACTTGTaGTGCCCGACCTCGAGTGTCACCATGAAGAGTGCG +
Preference number: 3 (lower is better)
Translates to: KQITALRYSLHL*CPTSSVTMKSA
Trigger: CGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR GCA 72 bp ACAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTaGACTAAGGTATTCATTACACTTGTGCTGCCCGAC +
Preference number: 3 (lower is better)
Translates to: TTVEELEPKANN*TKVFITLVLPD
Trigger: GTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGAGAGGAAAACTGATTTaGCAAGTTGAGCAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGRGKLI*QVEQLL
Trigger: GAGAAGCTGCTCAACTTGCAAAATCAGTTTTCCTCT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTGTAGACTTGAACAGGTaGGTAGACTTGAACAGGTTT +
Preference number: 3 (lower is better)
Translates to: EKVNLANEPKYHLDTVKIVDLNR*VDLNRF
Trigger: AAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTAC...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGGATTACTGGCTAATTTaGGGGTGGGGTTTATACTAT +
Preference number: 3 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGDYWLI*GWGLYY
Trigger: ATAGTATAAACCCCACCCCAAAATTAGCCAGTAATC...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTGCATTCAGGTATTGTTaGTTTTACTTCAGTACAGCA +
Preference number: 3 (lower is better)
Translates to: ANNCTKVFITLVLPDLECAFRYC*FYFSTA
Trigger: TGCTGTACTGAAGTAAAACAAACAATACCTGAATGC...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTTATGGAAGAGGATGTTaGGAGTTTAGGCTACAGAGC +
Preference number: 3 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRYGRGC*EFRLQS
Trigger: GCTCTGTAGCCTAAACTCCAAACATCCTCTTCCATA...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAAGAGGAAAACTGATTTaGCAAGTTGAGCAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIRGKLI*QVEQLL
Trigger: GAGAAGCTGCTCAACTTGCAAAATCAGTTTTCCTCT...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTGCATTCAGGTATTGTTaGTTTTACTTCAGTACAGCA +
Preference number: 3 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRAFRYC*FYFSTA
Trigger: TGCTGTACTGAAGTAAAACAAACAATACCTGAATGC...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTCAGAGCATTCAGGTATaGTTTGTTTTACTTCAGTAC +
Preference number: 3 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRQSIQV*FVLLQY
Trigger: GTACTGAAGTAAAACAAACAATACCTGAATGCTCTG...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTTTCACCACATCAAATaGAATCAGTACAGACCAACA +
Preference number: 3 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMFHHIK*NQYRPT
Trigger: TGTTGGTCTGTACTGATTCAATTTGATGTGGTGAAA...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
3UTR-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTTTCACCACATCAAATaGAATCAGTACAGACCAACA +
Preference number: 3 (lower is better)
Translates to: PHQIESVQTNTVNQIILNFHHIK*NQYRPT
Trigger: TGTTGGTCTGTACTGATTCAATTTGATGTGGTGAAA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCCGGAGTGGGAGGACGTaGTCACACCGGAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPRSGRT*SHRRVE
Trigger: CTCTACCCTCCGGTGTGACCACGTCCTCCCACTCCG...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619054.4
CDS-3UTR TCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTGGAGCCGGGCAGAGTaGACGCACCTGGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGWSRAE*THLAPP
Trigger: CGGCGGCGCCAGGTGCGTTCACTCTGCCCGGCTCCA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR TCA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCCTGCTGATTCATCTGTaGGAGGCTCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPLLIHL*EAPLGL
Trigger: CAGCCCCAGTGGAGCCTCTCACAGATGAATCAGCAG...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTGGAGCCGGGCAGAGTaGACGCACCTGGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVWSRAE*THLAPP
Trigger: CGGCGGCGCCAGGTGCGTTCACTCTGCCCGGCTCCA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR TCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTATGGAGCCGGGCAGAGTaGACGCACCTGGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QQSKNWNRKQITALRYSLWSRAE*THLAPP
Trigger: CGGCGGCGCCAGGTGCGTTCACTCTGCCCGGCTCCA...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370455.8
CDS-3UTR CCA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCGCCCACCATCATGCTTaGACTCTGTCCCATCACATT +
Preference number: 4 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPAHHHA*TLSHHI
Trigger: AATGTGATGGGACAGAGTCCAAGCATGATGGTGGGC...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGCGTGTCCCGCCTCCTTaGCCGGCCTGCCGGCACGCA +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMRVPPP*PACRHA
Trigger: TGCGTGCCGGCAGGCCGGTCAAGGAGGCGGGACACG...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316999.9
ENST00000370452.7
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCGTGTCCCGCCTCCTTaGCCGGCCTGCCGGCACGCA +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMRVPPP*PACRHA
Trigger: TGCGTGCCGGCAGGCCGGTCAAGGAGGCGGGACACG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316999.9
ENST00000370452.7
CDS-3UTR TCA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCGGAGTACTTTGCTGTTaGATGGTTCCTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPGVLCC*MVPVPY
Trigger: GTATGGCACAGGAACCATTCAACAGCAAAGTACTCC...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGGGTTGCAGCTGCTGGTaGAGAGGGTGTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGGCSCW*RGCPLS
Trigger: GCTCAGGGGACACCCTCTGCACCAGCAGCTGCAACC...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGCAGAGTGAACGCACCTaGCGCCGCCGGGACCGCGGG +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWQSERT*RRRDRG
Trigger: CCCGCGGTCCCGGCGGCGCCAGGTGCGTTCACTCTG...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTACAGAGTGAACGCACCTaGCGCCGCCGGGACCGCGGG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVQSERT*RRRDRG
Trigger: CCCGCGGTCCCGGCGGCGCCAGGTGCGTTCACTCTG...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATCAGAGTGAACGCACCTaGCGCCGCCGGGACCGCGGG +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNQSERT*RRRDRG
Trigger: CCCGCGGTCCCGGCGGCGCCAGGTGCGTTCACTCTG...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGGGGTGTCCCCTGAGCTaGGGGCATGACAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGGCPLS*GHDSCR
Trigger: CCTGCAACTGTCATGCCCCCAGCTCAGGGGACACCC...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTGGGTGTCCCCTGAGCTaGGGGCATGACAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EKVNLANEPKYHLDTVKIGCPLS*GHDSCR
Trigger: CCTGCAACTGTCATGCCCCCAGCTCAGGGGACACCC...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCTTAGGCTCCAGTTGCTaGTCTTTCTTCTGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPLGSSC*SFFCSF
Trigger: AAAGCTGCAGAAGAAAGATCAGCAACTGGAGCCTAA...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGCCCGTTGGTCACTGGTaGCACAGCAGGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGPVGHW*HSRAIK
Trigger: CTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGG...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTCCCGTTGGTCACTGGTaGCACAGCAGGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: EKVNLANEPKYHLDTVKIPVGHW*HSRAIK
Trigger: CTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGG...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCGTACAGTGCCGATACTaGAAGATACCACTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPVQCRY*KIPLLS
Trigger: ACTCAAGAGTGGTATCTTGCAGTATCGGCACTGTAC...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTCCCATCGAGGACCTTTaGCCTCGCAGTCGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVPIEDL*PRSRRS
Trigger: ACTGCGCCGACTGCGAGGCCAAAGGTCCTCGATGGG...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CCA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTCCGTTGTGTTCCCGTTaGTCACTGGTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: ANNCTKVFITLVLPDLECPLCSR*SLVPQQ
Trigger: CTGCTGTGGCACCAGTGACCAACGGGAACACAACGG...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTCCTGAGCTGGGGGCATaGCAGTTGCAGGTAAGGGAT +
Preference number: 4 (lower is better)
Translates to: EKVNLANEPKYHLDTVKIPELGA*QLQVRD
Trigger: ATCCCTTACCTGCAACTGTCATGCCCCCAGCTCAGG...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCGCAGAGGGTGTCCCCTaGGCTGGGGGCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: VVVLDETCIAVFISTVVCAEGVP*AGGMTV
Trigger: AACTGTCATGCCCCCAGCTCAGGGGACACCCTCTGC...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR TCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGCTGCTGATTCATCTGTaGGAGGCTCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGLLIHL*EAPLGL
Trigger: CAGCCCCAGTGGAGCCTCTCACAGATGAATCAGCAG...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTCCTCGAGTGTCACCATaGAGAGTGCGCTACCCAAGC +
Preference number: 4 (lower is better)
Translates to: EKVNLANEPKYHLDTVKIPRVSP*RVRYPS
Trigger: GCTTGGGTAGCGCACTCTTCATGGTGACACTCGAGG...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTAGACAGGGTTGCAGCTaGTGGTGCAGAGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVRQGCS*WCRGCP
Trigger: GGGACACCCTCTGCACCAGCAGCTGCAACCCTGTCT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGTTCCCGTTGGTCACTaGTGCCACAGCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVVPVGH*CHSRAI
Trigger: GATGGCCCTGCTGTGGCACCAGTGACCAACGGGAAC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGCCGTTGTGTTCCCGTTaGTCACTGGTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGPLCSR*SLVPQQ
Trigger: CTGCTGTGGCACCAGTGACCAACGGGAACACAACGG...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACGGGTGTCCCCTGAGCTaGGGGCATGACAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QSKNWNRKQITALRYSLHGCPLS*GHDSCR
Trigger: CCTGCAACTGTCATGCCCCCAGCTCAGGGGACACCC...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGGCCCACCATCATGCTTaGACTCTGTCCCATCACATT +
Preference number: 4 (lower is better)
Translates to: QQLVQFVQPVDPYGRGCLAHHHA*TLSHHI
Trigger: AATGTGATGGGACAGAGTCCAAGCATGATGGTGGGC...CAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGGTTGTGCTGGAGGGCTaGCCAAAACCTGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGVVLEG*PKPAVG
Trigger: CCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAAC...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCTCCACTGGGGCTGCTaGGCTTGCGGCAGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMLHWGC*ACGRPN
Trigger: GTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATCTCCACTGGGGCTGCTaGGCTTGCGGCAGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNLHWGC*ACGRPN
Trigger: GTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAG...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTACTCCACTGGGGCTGCTaGGCTTGCGGCAGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVLHWGC*ACGRPN
Trigger: GTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAG...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTATAAGGCCAGGAGCTaGAGGCACAGGCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVYKARS*RHRHAH
Trigger: ATGGGCGTGCCTGTGCCTGCAGCTCCTGGCCTTATA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGACCATCCTGCTGTTGTaGTGGAGGGCTGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGTILLL*WRAGQN
Trigger: GTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGGT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCACAGGGTTGCAGCTGCTaGTGCAGAGGGTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAQGCSC*CRGCPL
Trigger: CAGGGGACACCCTCTGCACCAGCAGCTGCAACCCTG...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTCAGGGTTGCAGCTGCTaGTGCAGAGGGTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRQGCSC*CRGCPL
Trigger: CAGGGGACACCCTCTGCACCAGCAGCTGCAACCCTG...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTAATCCGAGCCCGGAGTaGGAGGACGTGGTCACACCG +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRNPSPE*EDVVTP
Trigger: CGGTGTGACCACGTCCTCCCACTCCGGGCTCGGATT...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619054.4
CDS-3UTR TCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGCAGAGGGTGTCCCCTaGGCTGGGGGCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWAEGVP*AGGMTV
Trigger: AACTGTCATGCCCCCAGCTCAGGGGACACCCTCTGC...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGGGCCAACAACGTTCTaGGGAAGTGGCATCACACCA +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVGPTTF*GSGITP
Trigger: TGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATACTCCACTGGGGCTGCTaGGCTTGCGGCAGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCILHWGC*ACGRPN
Trigger: GTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAG...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGATGCCAGCCATCTGCTaGTTCATCTGTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGMPAIC*FICERL
Trigger: GAGCCTCTCACAGATGAATCAGCAGATGGCTGGCAT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTGTGTGCTGAGAGTCTaGCCTGATGAGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGCVLRV*PDELPD
Trigger: GTCTGGAAGCTCATCAGGTCAGACTCTCAGCACACA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTCCACAGTTGTGTGCTaGGAGTCTGACCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGSTVVC*ESDLMS
Trigger: GCTCATCAGGTCAGACTCTCAGCACACAACTGTGGA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCGAGCAAAGCTGCCCTTaGCATAAAATGATTTATCAA +
Preference number: 4 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPEQSCP*HKMIYQ
Trigger: TTGATAAATCATTTTATGTCAAGGGCAGCTTTGCTC...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGGGTTGCAGCTGCTGGTaGAGAGGGTGTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMGCSCW*RGCPLS
Trigger: GCTCAGGGGACACCCTCTGCACCAGCAGCTGCAACC...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTGGTTGCAGCTGCTGGTaGAGAGGGTGTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFGCSCW*RGCPLS
Trigger: GCTCAGGGGACACCCTCTGCACCAGCAGCTGCAACC...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGGGCTGGCCAAAACCTaGAGTAGGGGTTGCACTACT +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVGLAKT*SRGCTT
Trigger: AGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTACCATCCTGCTGTTGTaGTGGAGGGCTGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVTILLL*WRAGQN
Trigger: GTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGGT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGATCATCGTTCAGGGGTaGCACCGTTGTGTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGIIVQG*HRCVPV
Trigger: AACGGGAACACAACGGTGCCACCCCTGAACGATGAT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTACAGGGTTGCAGCTGCTaGTGCAGAGGGTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVQGCSC*CRGCPL
Trigger: CAGGGGACACCCTCTGCACCAGCAGCTGCAACCCTG...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACGTTGTGCTGGAGGGCTaGCCAAAACCTGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: QSKNWNRKQITALRYSLHVVLEG*PKPAVG
Trigger: CCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAAC...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTATCCTGCTGTTGTGCTaGAGGGCTGGCCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVILLLC*RAGQNL
Trigger: CAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGAT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGCAGAGGGTGTCCCCTaGGCTGGGGGCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIAEGVP*AGGMTV
Trigger: AACTGTCATGCCCCCAGCTCAGGGGACACCCTCTGC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACGGGCCAACAACGTTCTaGGGAAGTGGCATCACACCA +
Preference number: 4 (lower is better)
Translates to: QSKNWNRKQITALRYSLHGPTTF*GSGITP
Trigger: TGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCC...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTCCACAGTTGTGTGCTaGGAGTCTGACCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVSTVVC*ESDLMS
Trigger: GCTCATCAGGTCAGACTCTCAGCACACAACTGTGGA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATCCCGTTGGTCACTGGTaGCACAGCAGGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNPVGHW*HSRAIK
Trigger: CTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGG...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCCCGTTGGTCACTGGTaGCACAGCAGGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMPVGHW*HSRAIK
Trigger: CTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGAGACAGGGTTGCAGCTaGTGGTGCAGAGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMRQGCS*WCRGCP
Trigger: GGGACACCCTCTGCACCAGCAGCTGCAACCCTGTCT...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTATATAAGGCCAGGAGCTaGAGGCACAGGCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: QQSKNWNRKQITALRYSLYKARS*RHRHAH
Trigger: ATGGGCGTGCCTGTGCCTGCAGCTCCTGGCCTTATA...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGACCTGCAGTAGGGGTTaGACTACTGATACTCATGCC +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGTCSRG*TTDTHA
Trigger: GGCATGAGTATCAGTAGTGCAACCCCTACTGCAGGT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTAGCTTCCAGACCATCCTaGTGTTGTGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QQSKNWNRKQITALRYSLASRPS*CCAGGL
Trigger: CAGCCCTCCAGCACAACAGCAGGATGGTCTGGAAGC...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATACCCATCGAGGACCTTTaGCCTCGCAGTCGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIPIEDL*PRSRRS
Trigger: ACTGCGCCGACTGCGAGGCCAAAGGTCCTCGATGGG...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATGTTCCCGTTGGTCACTaGTGCCACAGCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNVPVGH*CHSRAI
Trigger: GATGGCCCTGCTGTGGCACCAGTGACCAACGGGAAC...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTGTTCCCGTTGGTCACTaGTGCCACAGCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFVPVGH*CHSRAI
Trigger: GATGGCCCTGCTGTGGCACCAGTGACCAACGGGAAC...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGGGTGTCCCCTGAGCTaGGGGCATGACAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIGCPLS*GHDSCR
Trigger: CCTGCAACTGTCATGCCCCCAGCTCAGGGGACACCC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTAGGCCAAACTTACTCTaGGGTGCACCCATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVRPNLL*GAPICP
Trigger: GGGACAAATGGGTGCACCCCAGAGTAAGTTTGGCCT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGCACTGATGGAGTGCTaGAGAACAGCATCACCCTTC +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVALMEC*RTASPF
Trigger: GAAGGGTGATGCTGTTCTCCAGCACTCCATCAGTGC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATGCTCGTTCAGCTTCTaGGCCTTCTCCCGACAGGAG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVCSFSF*AFSRQE
Trigger: CTCCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTGCTCGTTCAGCTTCTaGGCCTTCTCCCGACAGGAG +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMCSFSF*AFSRQE
Trigger: CTCCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCA...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR TCA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACGAAGCTTGGATAGGATaGGCTGGTGCTGCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: QSKNWNRKQITALRYSLHEAWIG*AGAARS
Trigger: TGAACGAGCAGCACCAGCTCATCCTATCCAAGCTTC...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370455.8
CDS-3UTR TCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATCCTGAGCTGGGGGCATaGCAGTTGCAGGTAAGGGAT +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNPELGA*QLQVRD
Trigger: ATCCCTTACCTGCAACTGTCATGCCCCCAGCTCAGG...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGCTGCTGATTCATCTGTaGGAGGCTCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMLLIHL*EAPLGL
Trigger: CAGCCCCAGTGGAGCCTCTCACAGATGAATCAGCAG...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCTCCACAGTTGTGTGCTaGGAGTCTGACCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: VVVLDETCIAVFISTVVCSTVVC*ESDLMS
Trigger: GCTCATCAGGTCAGACTCTCAGCACACAACTGTGGA...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCCTCGAGTGTCACCATaGAGAGTGCGCTACCCAAGC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMPRVSP*RVRYPS
Trigger: GCTTGGGTAGCGCACTCTTCATGGTGACACTCGAGG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAAGACAGGGTTGCAGCTaGTGGTGCAGAGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIRQGCS*WCRGCP
Trigger: GGGACACCCTCTGCACCAGCAGCTGCAACCCTGTCT...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTATAAGGCCAGGAGCTaGAGGCACAGGCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNYKARS*RHRHAH
Trigger: ATGGGCGTGCCTGTGCCTGCAGCTCCTGGCCTTATA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATATAAGGCCAGGAGCTaGAGGCACAGGCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVYKARS*RHRHAH
Trigger: ATGGGCGTGCCTGTGCCTGCAGCTCCTGGCCTTATA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTACCATCCTGCTGTTGTaGTGGAGGGCTGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRTILLL*WRAGQN
Trigger: GTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGGT...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATGCTTCCAGACCATCCTaGTGTTGTGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNASRPS*CCAGGL
Trigger: CAGCCCTCCAGCACAACAGCAGGATGGTCTGGAAGC...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAGCTTCCAGACCATCCTaGTGTTGTGCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVASRPS*CCAGGL
Trigger: CAGCCCTCCAGCACAACAGCAGGATGGTCTGGAAGC...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTGGATAGGATGAGCTaGTGCTGCTCGTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVLDRMS*CCSFSF
Trigger: GAAGCTGAACGAGCAGCACCAGCTCATCCTATCCAA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGCCGTTGTGTTCCCGTTaGTCACTGGTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMPLCSR*SLVPQQ
Trigger: CTGCTGTGGCACCAGTGACCAACGGGAACACAACGG...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTAGGCACGCCCATCGATaGAAAGCCCTGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRRHAHR*KALKCS
Trigger: GCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCT...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGTTGTGCTGGAGGGCTaGCCAAAACCTGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMVVLEG*PKPAVG
Trigger: CCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAAC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGCAACAGTCGAAGAACTaGAACCGAAAGCAAATAACT +
Preference number: 4 (lower is better)
Translates to: QQLVQFVQPVDPYGRGCLQQSKN*NRKQIT
Trigger: AGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG...CAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR CAA 72 bp CGAAAGCAAATAACTGCACTAAGGTATTCATTACACTaGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RKQITALRYSLH*CCPTSSVTMKS
Trigger: ACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATGCTCGTTCAGCTTCTaGGCCTTCTCCCGACAGGAG +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCICSFSF*AFSRQE
Trigger: CTCCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATACCTGAGCTGGGGGCATaGCAGTTGCAGGTAAGGGAT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIPELGA*QLQVRD
Trigger: ATCCCTTACCTGCAACTGTCATGCCCCCAGCTCAGG...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCATCGATGGAAAGCCCTaGAATGCAGCTGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VVVLDETCIAVFISTVVCIDGKP*NAAGAC
Trigger: ACAAGCACCAGCTGCATTTCAGGGCTTTCCATCGAT...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAGGGCCAACAACGTTCTaGGGAAGTGGCATCACACCA +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVGPTTF*GSGITP
Trigger: TGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCC...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCAATGCCAGCCATCTGCTaGTTCATCTGTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAMPAIC*FICERL
Trigger: GAGCCTCTCACAGATGAATCAGCAGATGGCTGGCAT...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTATCCACAGTTGTGTGCTaGGAGTCTGACCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: QQSKNWNRKQITALRYSLSTVVC*ESDLMS
Trigger: GCTCATCAGGTCAGACTCTCAGCACACAACTGTGGA...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATCTTCTGCATTATCTGTaGGAGGCTCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNLLHYL*EAPLGL
Trigger: CAGCCCCAGTGGAGCCTCTCACAGATAATGCAGAAG...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR GCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTACTGTAGACAGGGTTaGAGCTGCTGGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNYCRQG*SCWCRG
Trigger: CCCTCTGCACCAGCAGCTGCAACCCTGTCTACAGTA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGTACTGTAGACAGGGTTaGAGCTGCTGGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMYCRQG*SCWCRG
Trigger: CCCTCTGCACCAGCAGCTGCAACCCTGTCTACAGTA...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTACTGTAGACAGGGTTaGAGCTGCTGGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMYCRQG*SCWCRG
Trigger: CCCTCTGCACCAGCAGCTGCAACCCTGTCTACAGTA...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATACTGTAGACAGGGTTaGAGCTGCTGGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVYCRQG*SCWCRG
Trigger: CCCTCTGCACCAGCAGCTGCAACCCTGTCTACAGTA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTGCATGCCCACCATCATaGTTGGACTCTGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRACPPS*LDSVPS
Trigger: TGATGGGACAGAGTCCAAGCATGATGGTGGGCATGC...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTAAACTTACTCTGGGGTaGACCCATTTGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVKLTLG*THLSHH
Trigger: ATGGTGGGACAAATGGGTGCACCCCAGAGTAAGTTT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGGGCTGGCCAAAACCTaGAGTAGGGGTTGCACTACT +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMGLAKT*SRGCTT
Trigger: AGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAGGGCTGGCCAAAACCTaGAGTAGGGGTTGCACTACT +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVGLAKT*SRGCTT
Trigger: AGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCC...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATACCATCCTGCTGTTGTaGTGGAGGGCTGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNTILLL*WRAGQN
Trigger: GTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGGT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTATCATTACACTTGTGCTaGCCGACCTCGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: QQSKNWNRKQITALRYSLSLHLC*PTSSVT
Trigger: GGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATAGGCACGCCCATCGATaGAAAGCCCTGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNRHAHR*KALKCS
Trigger: GCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGAGGCACGCCCATCGATaGAAAGCCCTGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMRHAHR*KALKCS
Trigger: GCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTAGGCACGCCCATCGATaGAAAGCCCTGAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFRHAHR*KALKCS
Trigger: GCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCT...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGTTGTGCTGGAGGGCTaGCCAAAACCTGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIVVLEG*PKPAVG
Trigger: CCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAAC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGATCCTGCTGTTGTGCTaGAGGGCTGGCCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMILLLC*RAGQNL
Trigger: CAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGAT...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAATCCTGCTGTTGTGCTaGAGGGCTGGCCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVILLLC*RAGQNL
Trigger: CAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGAT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTAGTTTGTCCAGCCAGTaGATCCATATGGAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: EKVNLANEPKYHLDTVKISLSSQ*IHMEED
Trigger: ATCCTCTTCCATATGGATCCACTGGCTGGACAAACT...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATGAAGCTTGGATAGGATaGGCTGGTGCTGCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNEAWIG*AGAARS
Trigger: TGAACGAGCAGCACCAGCTCATCCTATCCAAGCTTC...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGAAGCTTGGATAGGATaGGCTGGTGCTGCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMEAWIG*AGAARS
Trigger: TGAACGAGCAGCACCAGCTCATCCTATCCAAGCTTC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGGGCCAACAACGTTCTaGGGAAGTGGCATCACACCA +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIGPTTF*GSGITP
Trigger: TGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAATGCCAGCCATCTGCTaGTTCATCTGTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVMPAIC*FICERL
Trigger: GAGCCTCTCACAGATGAATCAGCAGATGGCTGGCAT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATGTGTGCTGAGAGTCTaGCCTGATGAGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVCVLRV*PDELPD
Trigger: GTCTGGAAGCTCATCAGGTCAGACTCTCAGCACACA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTGTGTGCTGAGAGTCTaGCCTGATGAGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMCVLRV*PDELPD
Trigger: GTCTGGAAGCTCATCAGGTCAGACTCTCAGCACACA...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAGCCAGTAGATTGCACTaGTGGAGTGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVASRLH*WSAGEQ
Trigger: CTGTTCTCCAGCACTCCATCAGTGCAATCTACTGGC...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGAGGATACCAAAGGCTaGAGAGGAGCATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMEDTKG*RGASEE
Trigger: CTCCTCTGATGCTCCTCTTCAGCCTTTGGTATCCTC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGAGGATACCAAAGGCTaGAGAGGAGCATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWEDTKG*RGASEE
Trigger: CTCCTCTGATGCTCCTCTTCAGCCTTTGGTATCCTC...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATGCATGCCCACCATCATaGTTGGACTCTGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNACPPS*LDSVPS
Trigger: TGATGGGACAGAGTCCAAGCATGATGGTGGGCATGC...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCAAACTTACTCTGGGGTaGACCCATTTGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: VVVLDETCIAVFISTVVCKLTLG*THLSHH
Trigger: ATGGTGGGACAAATGGGTGCACCCCAGAGTAAGTTT...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR GCA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACAAACTTACTCTGGGGTaGACCCATTTGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: QSKNWNRKQITALRYSLHKLTLG*THLSHH
Trigger: ATGGTGGGACAAATGGGTGCACCCCAGAGTAAGTTT...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGGGCTGGCCAAAACCTaGAGTAGGGGTTGCACTACT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIGLAKT*SRGCTT
Trigger: AGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTCATTACACTTGTGCTaGCCGACCTCGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMSLHLC*PTSSVT
Trigger: GGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAATCATCGTTCAGGGGTaGCACCGTTGTGTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVIIVQG*HRCVPV
Trigger: AACGGGAACACAACGGTGCCACCCCTGAACGATGAT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGATCATCGTTCAGGGGTaGCACCGTTGTGTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMIIVQG*HRCVPV
Trigger: AACGGGAACACAACGGTGCCACCCCTGAACGATGAT...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCAACGTTCTGAGGAAGTaGCATCACACCAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: VVVLDETCIAVFISTVVCNVLRK*HHTSLC
Trigger: GCACAAACTGGTGTGATGCCACTTCCTCAGAACGTT...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR CCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGAGGCCAAACTTACTCTaGGGTGCACCCATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMRPNLL*GAPICP
Trigger: GGGACAAATGGGTGCACCCCAGAGTAAGTTTGGCCT...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAATCCTGCTGTTGTGCTaGAGGGCTGGCCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIILLLC*RAGQNL
Trigger: CAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGAT...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
3UTR CAA 72 bp TTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTaGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTT +
Preference number: 4 (lower is better)
Translates to: FVQPVDPYGRGC*EFRLQSIQVLF
Trigger: AAACAATACCTGAATGCTCTGTAGCCTAAACTCCAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTAAAAATTCCACTGCTTaGTCTGTCTGTGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVKNSTA*SVCGLR
Trigger: TCGAAGACCACAGACAGATCAAGCAGTGGAATTTTT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATCGATGGAAAGCCCTaGAATGCAGCTGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNIDGKP*NAAGAC
Trigger: ACAAGCACCAGCTGCATTTCAGGGCTTTCCATCGAT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGATCGATGGAAAGCCCTaGAATGCAGCTGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWIDGKP*NAAGAC
Trigger: ACAAGCACCAGCTGCATTTCAGGGCTTTCCATCGAT...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGATCGATGGAAAGCCCTaGAATGCAGCTGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMIDGKP*NAAGAC
Trigger: ACAAGCACCAGCTGCATTTCAGGGCTTTCCATCGAT...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGTTGAATGGTTCCTGTaGCATACAGAGATAAGATGG +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVVEWFL*HTEIRW
Trigger: CCATCTTATCTCTGTATGGCACAGGAACCATTCAAC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGCATGCCCACCATCATaGTTGGACTCTGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIACPPS*LDSVPS
Trigger: TGATGGGACAGAGTCCAAGCATGATGGTGGGCATGC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAACCTGCAGTAGGGGTTaGACTACTGATACTCATGCC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVTCSRG*TTDTHA
Trigger: GGCATGAGTATCAGTAGTGCAACCCCTACTGCAGGT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGACCTGCAGTAGGGGTTaGACTACTGATACTCATGCC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMTCSRG*TTDTHA
Trigger: GGCATGAGTATCAGTAGTGCAACCCCTACTGCAGGT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGATTGCACTGATGGAGTaGTGGAGAACAGCATCACCC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMIALME*WRTASP
Trigger: GGGTGATGCTGTTCTCCAGCACTCCATCAGTGCAAT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCATTGGCCAGTAGATTaGACTGATGGAGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMHWPVD*TDGVLE
Trigger: CTCCAGCACTCCATCAGTGCAATCTACTGGCCAATG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR GCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTTGTCACCATGAAGAGTaGGCTACCCAAGCTATTTCC +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRCHHEE*ATQAIS
Trigger: GGAAATAGCTTGGGTAGCGCACTCTTCATGGTGACA...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTTGGATAGGATGAGCTaGTGCTGCTCGTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMLDRMS*CCSFSF
Trigger: GAAGCTGAACGAGCAGCACCAGCTCATCCTATCCAA...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTGTTCTGCTGTCCATTaGTCTAGGTTGACTGATTTG +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVCSAVH*SRLTDL
Trigger: CAAATCAGTCAACCTAGACCAATGGACAGCAGAACA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGCCCACCATCATGCTTaGACTCTGTCCCATCACATT +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMAHHHA*TLSHHI
Trigger: AATGTGATGGGACAGAGTCCAAGCATGATGGTGGGC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGGCCCACCATCATGCTTaGACTCTGTCCCATCACATT +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMAHHHA*TLSHHI
Trigger: AATGTGATGGGACAGAGTCCAAGCATGATGGTGGGC...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCAAACGTTCTGAGGAAGTaGCATCACACCAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTANVLRK*HHTSLC
Trigger: GCACAAACTGGTGTGATGCCACTTCCTCAGAACGTT...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATGGAGTACTTTGCTGTTaGATGGTTCCTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNGVLCC*MVPVPY
Trigger: GTATGGCACAGGAACCATTCAACAGCAAAGTACTCC...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGGGAGTACTTTGCTGTTaGATGGTTCCTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMGVLCC*MVPVPY
Trigger: GTATGGCACAGGAACCATTCAACAGCAAAGTACTCC...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGGTGGTAGTTCTGGATaGAACTTGTATTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVGGSSG*NLYCSF
Trigger: AAAACTGCAATACAAGTTTCATCCAGAACTACCACC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTACTGATTTTGCAAGTTaGGCAGCTTCTCAAATAATG +
Preference number: 4 (lower is better)
Translates to: EKVNLANEPKYHLDTVKITDFAS*AASQIM
Trigger: CATTATTTGAGAAGCTGCTCAACTTGCAAAATCAGT...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGAGCTGTAAGTGGTTTTaGCGGCTTTTCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMSCKWF*RLFWLL
Trigger: AAGGAGCCAGAAAAGCCGGCAAAACCACTTACAGCT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATAGCTGTAAGTGGTTTTaGCGGCTTTTCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNSCKWF*RLFWLL
Trigger: AAGGAGCCAGAAAAGCCGGCAAAACCACTTACAGCT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCGTTGAATGGTTCCTGTaGCATACAGAGATAAGATGG +
Preference number: 4 (lower is better)
Translates to: VVVLDETCIAVFISTVVCVEWFL*HTEIRW
Trigger: CCATCTTATCTCTGTATGGCACAGGAACCATTCAAC...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGAAACTTACTCTGGGGTaGACCCATTTGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMKLTLG*THLSHH
Trigger: ATGGTGGGACAAATGGGTGCACCCCAGAGTAAGTTT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAACAGCATCACCCTTCTaGATTATCTGTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVTASPF*IICERL
Trigger: GAGCCTCTCACAGATAATGCAGAAGGGTGATGCTGT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR GCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTGTACAGTGCCGATACTaGAAGATACCACTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRVQCRY*KIPLLS
Trigger: ACTCAAGAGTGGTATCTTGCAGTATCGGCACTGTAC...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATGTCACCATGAAGAGTaGGCTACCCAAGCTATTTCC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVCHHEE*ATQAIS
Trigger: GGAAATAGCTTGGGTAGCGCACTCTTCATGGTGACA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTTATTCATTACACTTGTaGTGCCCGACCTCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFYSLHL*CPTSSV
Trigger: GACACTCGAGGTCGGGCAGCACAAGTGTAATGAATA...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGGATCCCAGCCAGGGATaGAAGAATCTGACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMDPSQG*KNLTFS
Trigger: TGAGAAAGTCAGATTCTTGCATCCCTGGCTGGGATC...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTCTTCGAAAGTTCTCTaGAAGATTGGCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVSSKVL*KIGFIE
Trigger: CTCTATGAAGCCAATCTTCCAGAGAACTTTCGAAGA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAAACGTTCTGAGGAAGTaGCATCACACCAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVNVLRK*HHTSLC
Trigger: GCACAAACTGGTGTGATGCCACTTCCTCAGAACGTT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGAACGTTCTGAGGAAGTaGCATCACACCAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMNVLRK*HHTSLC
Trigger: GCACAAACTGGTGTGATGCCACTTCCTCAGAACGTT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTGCCAGTGGATCCATATaGAAGAGGATGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRASGSI*KRMFGV
Trigger: AACTCCAAACATCCTCTTCCATATGGATCCACTGGC...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTAAAAAATTCCACTGCTTaGTCTGTCTGTGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: QQSKNWNRKQITALRYSLKNSTA*SVCGLR
Trigger: TCGAAGACCACAGACAGATCAAGCAGTGGAATTTTT...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGTTAGGCTCCAGTTGCTaGTCTTTCTTCTGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMLGSSC*SFFCSF
Trigger: AAAGCTGCAGAAGAAAGATCAGCAACTGGAGCCTAA...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATTAGGCTCCAGTTGCTaGTCTTTCTTCTGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVLGSSC*SFFCSF
Trigger: AAAGCTGCAGAAGAAAGATCAGCAACTGGAGCCTAA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGGAGTACTTTGCTGTTaGATGGTTCCTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIGVLCC*MVPVPY
Trigger: GTATGGCACAGGAACCATTCAACAGCAAAGTACTCC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACTTCACCACATCAAATTaGATCAGTACAGACCAACAC +
Preference number: 4 (lower is better)
Translates to: QSKNWNRKQITALRYSLHFTTSN*ISTDQH
Trigger: GTGTTGGTCTGTACTGATTCAATTTGATGTGGTGAA...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGAGCAAAGCTGCCCTTaGCATAAAATGATTTATCAA +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVEQSCP*HKMIYQ
Trigger: TTGATAAATCATTTTATGTCAAGGGCAGCTTTGCTC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTAAATCATGGGAAATATaGGCAAAGCTGCCCTTGACA +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRKSWEI*AKLPLT
Trigger: TGTCAAGGGCAGCTTTGCTCATATTTCCCATGATTT...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGTATTTCCCATATCTTaGATGCACTGTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVVFPIS*MHCICS
Trigger: AGAACAGATACAGTGCATGCAAGATATGGGAAATAC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGATCCCAGCCAGGGATaGAAGAATCTGACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIDPSQG*KNLTFS
Trigger: TGAGAAAGTCAGATTCTTGCATCCCTGGCTGGGATC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCATGTTCTGCTGTCCATTaGTCTAGGTTGACTGATTTG +
Preference number: 4 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTACSAVH*SRLTDL
Trigger: CAAATCAGTCAACCTAGACCAATGGACAGCAGAACA...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTTGTTCTGCTGTCCATTaGTCTAGGTTGACTGATTTG +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRCSAVH*SRLTDL
Trigger: CAAATCAGTCAACCTAGACCAATGGACAGCAGAACA...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACTCTTCGAAAGTTCTCTaGAAGATTGGCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: QSKNWNRKQITALRYSLHSSKVL*KIGFIE
Trigger: CTCTATGAAGCCAATCTTCCAGAGAACTTTCGAAGA...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGATAAGATGGAGTCTTTaGAAAGTTGTTTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGIRWSL*KVVSLP
Trigger: TGGCAAAGAAACAACTTTCCAAAGACTCCATCTTAT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAGCCAGTGGATCCATATaGAAGAGGATGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVASGSI*KRMFGV
Trigger: AACTCCAAACATCCTCTTCCATATGGATCCACTGGC...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR CAA 72 bp GTTTGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTaGTTTTACTTCAGTACAGCAGCCTTTCTTGTCATC +
Preference number: 4 (lower is better)
Translates to: VWSLGYRAFRYC*FYFSTAAFLVI
Trigger: GATGACAAGAAAGGCTGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR CAA 72 bp GGATGTTTGGAGTTTAGGCTACAGAGCATTCAGGTATaGTTTGTTTTACTTCAGTACAGCAGCCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GCLEFRLQSIQV*FVLLQYSSLSC
Trigger: ACAAGAAAGGCTGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCAAACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGAAAAATTCCACTGCTTaGTCTGTCTGTGGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMKNSTA*SVCGLR
Trigger: TCGAAGACCACAGACAGATCAAGCAGTGGAATTTTT...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATTAGGCTCCAGTTGCTaGTCTTTCTTCTGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCILGSSC*SFFCSF
Trigger: AAAGCTGCAGAAGAAAGATCAGCAACTGGAGCCTAA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTCTTTGCCACTTCTTCTaGTTTTGTAGTTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRLCHFF*FCSLLS
Trigger: ACTGAGCAAACTACAAAATCAGAAGAAGTGGCAAAG...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGTGCAGCTGGTGCTTGTaGGGTAAATGGTATATTTGT +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWCSWCL*GKWYIC
Trigger: ACAAATATACCATTTACCTCACAAGCACCAGCTGCA...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTGCAGCTGGTGCTTGTaGGGTAAATGGTATATTTGT +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNCSWCL*GKWYIC
Trigger: ACAAATATACCATTTACCTCACAAGCACCAGCTGCA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGAAATCATGGGAAATATaGGCAAAGCTGCCCTTGACA +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWKSWEI*AKLPLT
Trigger: TGTCAAGGGCAGCTTTGCTCATATTTCCCATGATTT...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGAAATCATGGGAAATATaGGCAAAGCTGCCCTTGACA +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMKSWEI*AKLPLT
Trigger: TGTCAAGGGCAGCTTTGCTCATATTTCCCATGATTT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAGTTGAATGGTTCCTGTaGCATACAGAGATAAGATGG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVVEWFL*HTEIRW
Trigger: CCATCTTATCTCTGTATGGCACAGGAACCATTCAAC...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTTGAATGGTTCCTGTaGCATACAGAGATAAGATGG +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWVEWFL*HTEIRW
Trigger: CCATCTTATCTCTGTATGGCACAGGAACCATTCAAC...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTCATCACACCAGTTTGTaGATTTCCCATAAACCCATT +
Preference number: 4 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRHHTSL*ISHKPI
Trigger: AATGGGTTTATGGGAAATGCACAAACTGGTGTGATG...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTACACTAGAAAACAGTaGTCAGTGAGACATTTACAT +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVYTRKQ*SVRHLH
Trigger: ATGTAAATGTCTCACTGAGCACTGTTTTCTAGTGTA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTAAGTTCTCTGGAAGATTaGCTTCATAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: QQSKNWNRKQITALRYSLSSLED*LHRVVL
Trigger: CAAGACTACTCTATGAAGCCAATCTTCCAGAGAACT...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCAAGTTCTCTGGAAGATTaGCTTCATAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTASSLED*LHRVVL
Trigger: CAAGACTACTCTATGAAGCCAATCTTCCAGAGAACT...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCATCTTCGAAAGTTCTCTaGAAGATTGGCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTASSKVL*KIGFIE
Trigger: CTCTATGAAGCCAATCTTCCAGAGAACTTTCGAAGA...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTATAAGATGGAGTCTTTaGAAAGTTGTTTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVIRWSL*KVVSLP
Trigger: TGGCAAAGAAACAACTTTCCAAAGACTCCATCTTAT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGGACATCTGTTTAAATaGAGCTTGTCAGTTAACATA +
Preference number: 4 (lower is better)
Translates to: RFSKECQVVVLDETCIAVGHLFK*SLSVNI
Trigger: TATGTTAACTGACAAGCTCCATTTAAACAGATGTCC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGGAAGAGGATGTTTaGAGTTTAGGCTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNMEEDV*SLGYRA
Trigger: TGCTCTGTAGCCTAAACTCCAAACATCCTCTTCCAT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGATGGAAGAGGATGTTTaGAGTTTAGGCTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMMEEDV*SLGYRA
Trigger: TGCTCTGTAGCCTAAACTCCAAACATCCTCTTCCAT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCACAACAGTCGAAGAACTaGAACCGAAAGCAAATAACT +
Preference number: 4 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAQQSKN*NRKQIT
Trigger: AGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATCTTTGCCACTTCTTCTaGTTTTGTAGTTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNLCHFF*FCSLLS
Trigger: ACTGAGCAAACTACAAAATCAGAAGAAGTGGCAAAG...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTCTTTGCCACTTCTTCTaGTTTTGTAGTTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFLCHFF*FCSLLS
Trigger: ACTGAGCAAACTACAAAATCAGAAGAAGTGGCAAAG...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATGCAGCTGGTGCTTGTaGGGTAAATGGTATATTTGT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCICSWCL*GKWYIC
Trigger: ACAAATATACCATTTACCTCACAAGCACCAGCTGCA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGGGTGGTAGTTCTGGATaGAACTTGTATTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMGGSSG*NLYCSF
Trigger: AAAACTGCAATACAAGTTTCATCCAGAACTACCACC...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATTCACCACATCAAATTaGATCAGTACAGACCAACAC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVFTTSN*ISTDQH
Trigger: GTGTTGGTCTGTACTGATTCAATTTGATGTGGTGAA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTACCACCTGGACACAGTaGAAATTGAGGTATAAATTG +
Preference number: 4 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFTTWTQ*KLRYKL
Trigger: CAATTTATACCTCAATTTTCACTGTGTCCAGGTGGT...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAAGGGATGCAAGAATCTaGCTTTCTCAAACAGATAAC +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVRDARI*LSQTDN
Trigger: GTTATCTGTTTGAGAAAGTCAGATTCTTGCATCCCT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTACATCACACCAGTTTGTaGATTTCCCATAAACCCATT +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVHHTSL*ISHKPI
Trigger: AATGGGTTTATGGGAAATGCACAAACTGGTGTGATG...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCATCACACCAGTTTGTaGATTTCCCATAAACCCATT +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMHHTSL*ISHKPI
Trigger: AATGGGTTTATGGGAAATGCACAAACTGGTGTGATG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTCATCACACCAGTTTGTaGATTTCCCATAAACCCATT +
Preference number: 4 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFHHTSL*ISHKPI
Trigger: AATGGGTTTATGGGAAATGCACAAACTGGTGTGATG...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGAGTTCTCTGGAAGATTaGCTTCATAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWSSLED*LHRVVL
Trigger: CAAGACTACTCTATGAAGCCAATCTTCCAGAGAACT...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAAGTTCTCTGGAAGATTaGCTTCATAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVSSLED*LHRVVL
Trigger: CAAGACTACTCTATGAAGCCAATCTTCCAGAGAACT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGTCTTCGAAAGTTCTCTaGAAGATTGGCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWSSKVL*KIGFIE
Trigger: CTCTATGAAGCCAATCTTCCAGAGAACTTTCGAAGA...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCATAAGATGGAGTCTTTaGAAAGTTGTTTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VVVLDETCIAVFISTVVCIRWSL*KVVSLP
Trigger: TGGCAAAGAAACAACTTTCCAAAGACTCCATCTTAT...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATACTTTGCCACTTCTTCTaGTTTTGTAGTTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCILCHFF*FCSLLS
Trigger: ACTGAGCAAACTACAAAATCAGAAGAAGTGGCAAAG...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGGAGCAAAGCTGCCCTTaGCATAAAATGATTTATCAA +
Preference number: 4 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMEQSCP*HKMIYQ
Trigger: TTGATAAATCATTTTATGTCAAGGGCAGCTTTGCTC...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAACTGATTTTGCAAGTTaGGCAGCTTCTCAAATAATG +
Preference number: 4 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVTDFAS*AASQIM
Trigger: CATTATTTGAGAAGCTGCTCAACTTGCAAAATCAGT...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGACTGATTTTGCAAGTTaGGCAGCTTCTCAAATAATG +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMTDFAS*AASQIM
Trigger: CATTATTTGAGAAGCTGCTCAACTTGCAAAATCAGT...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAACCACCTGGACACAGTaGAAATTGAGGTATAAATTG +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCITTWTQ*KLRYKL
Trigger: CAATTTATACCTCAATTTTCACTGTGTCCAGGTGGT...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAAGGGATGCAAGAATCTaGCTTTCTCAAACAGATAAC +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIRDARI*LSQTDN
Trigger: GTTATCTGTTTGAGAAAGTCAGATTCTTGCATCCCT...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGTATTTCCCATATCTTaGATGCACTGTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMVFPIS*MHCICS
Trigger: AGAACAGATACAGTGCATGCAAGATATGGGAAATAC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCATACACTAGAAAACAGTaGTCAGTGAGACATTTACAT +
Preference number: 4 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAYTRKQ*SVRHLH
Trigger: ATGTAAATGTCTCACTGAGCACTGTTTTCTAGTGTA...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR TCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGAGCAAAGCTGCCCTTaGCATAAAATGATTTATCAA +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIEQSCP*HKMIYQ
Trigger: TTGATAAATCATTTTATGTCAAGGGCAGCTTTGCTC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGTATTTCCCATATCTTaGATGCACTGTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIVFPIS*MHCICS
Trigger: AGAACAGATACAGTGCATGCAAGATATGGGAAATAC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTACACTAGAAAACAGTaGTCAGTGAGACATTTACAT +
Preference number: 4 (lower is better)
Translates to: PHQIESVQTNTVNQIILNYTRKQ*SVRHLH
Trigger: ATGTAAATGTCTCACTGAGCACTGTTTTCTAGTGTA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGCCGAAAGCAAATAACTaGACTAAGGTATTCATTACA +
Preference number: 4 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWPKANN*TKVFIT
Trigger: TGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGG...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTCCGAAAGCAAATAACTaGACTAAGGTATTCATTACA +
Preference number: 4 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFPKANN*TKVFIT
Trigger: TGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGG...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CCA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGGACATCTGTTTAAATaGAGCTTGTCAGTTAACATA +
Preference number: 4 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMGHLFK*SLSVNI
Trigger: TATGTTAACTGACAAGCTCCATTTAAACAGATGTCC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
3UTR CAA 72 bp AAAATGATTTATCAACCTGCTTTTCACCACATCAAATaGAATCAGTACAGACCAACACGGTCAATCAGATCA +
Preference number: 4 (lower is better)
Translates to: KMIYQPAFHHIK*NQYRPTRSIRS
Trigger: TGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGGTGAAAAGCAGGTTGATAAATCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR GCA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATACACTAGAAAACAGTaGTCAGTGAGACATTTACAT +
Preference number: 4 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIYTRKQ*SVRHLH
Trigger: ATGTAAATGTCTCACTGAGCACTGTTTTCTAGTGTA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CCA 90 bp CGGCGGCGGCGGACGCTGGCTGGAGCCGGGCAGAGTGAACGCACCTaGCGCCGCCGGGACCGCGGGCGGACTCAGCCCAGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: RRRRTLAGAGQSERT*RRRDRGRTQPRKRQ
Trigger: CTGCCGCTTCCTGGGCTGAGTCCGCCCGCGGTCCCGGCGGCGCCAGGTGCGTTCACTCTGCCCGGCTCCAGCCAGCGTCCGCCGCCGCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS TCA 90 bp CTCAGAAGCTTGGATAGGATGAGCTGGTGCTGCTCGTTCAGCTTCTaGGCCTTCTCCCGACAGGAGCGCGTCGCCATCTCGGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: LRSLDRMSWCCSFSF*AFSRQERVAISAAG
Trigger: CCCCGCTGCCGAGATGGCGACGCGCTCCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCAGCACCAGCTCATCCTATCCAAGCTTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS TCA 90 bp CGGCGCAGTACTTGTTGTCCTCCTCCCTCAGAAGCTTGGATAGGATaGGCTGGTGCTGCTCGTTCAGCTTCTGAGCCTTCTCCCGACAGG +
Preference number: 5 (lower is better)
Translates to: RRSTCCPPPSEAWIG*AGAARSASEPSPDR
Trigger: CCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCAGCACCAGCTCATCCTATCCAAGCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CAA 90 bp CAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGGCCCATCGAGGACCTTaGGCCTCGCAGTCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: QQLVQFVQPVDPYGRGCLAHRGP*ASQSAQ
Trigger: CTGCGCCGACTGCGAGGCCAAAGGTCCTCGATGGGC...CAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370455.8
CDS-3UTR CAA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCTCAGGGGTGGCACCGTaGTGTTCCCGTTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPSGVAP*CSRWSL
Trigger: CAGTGACCAACGGGAACACAACGGTGCCACCCCTGA...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS GCA 90 bp GCTTCCAGACCATCCTGCTGTTGTGCTGGAGGGCTGGCCAAAACCTaGAGTAGGGGTTGCACTACTGATACTCATGCCAGCCATCTGCTG +
Preference number: 5 (lower is better)
Translates to: ASRPSCCCAGGLAKT*SRGCTTDTHASHLL
Trigger: CAGCAGATGGCTGGCATGAGTATCAGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGGTCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGACGTGTCCCGCCTCCTaGACCGGCCTGCCGGCACGC +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGTCPAS*TGLPAR
Trigger: GCGTGCCGGCAGGCCGGTCAAGGAGGCGGGACACGT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316999.9
ENST00000370452.7
CDS GCA 90 bp CATGCTTGGACTCTGTCCCATCACATTTCCTATAAGGCCAGGAGCTaGAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGC +
Preference number: 5 (lower is better)
Translates to: HAWTLSHHISYKARS*RHRHAHRWKALKCS
Trigger: GCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCTGGCCTTATAGGAAATGTGATGGGACAGAGTCCAAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CCA 90 bp AGATGTCCAGATCATCGTTCAGGGGTGGCACCGTTGTGTTCCCGTTaGTCACTGGTGCCACAGCAGGGCCATCAAGTCCTAAAAGATCCA +
Preference number: 5 (lower is better)
Translates to: RCPDHRSGVAPLCSR*SLVPQQGHQVLKDP
Trigger: TGGATCTTTTAGGACTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGGAACACAACGGTGCCACCCCTGAACGATGATCTGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CCA 90 bp ATTAGAAATCATCGGTCCAAAGATGTCCAGATCATCGTTCAGGGGTaGCACCGTTGTGTTCCCGTTGGTCACTGGTGCCACAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: IRNHRSKDVQIIVQG*HRCVPVGHWCHSRA
Trigger: GGCCCTGCTGTGGCACCAGTGACCAACGGGAACACAACGGTGCCACCCCTGAACGATGATCTGGACATCTTTGGACCGATGATTTCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGCCCATCGAGGACCTTaGGCCTCGCAGTCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVAHRGP*ASQSAQ
Trigger: CTGCGCCGACTGCGAGGCCAAAGGTCCTCGATGGGC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS TCA 90 bp GCACCCATTTGTCCCACCATTCCTCCTTGGGGGCCAACAACGTTCTaGGGAAGTGGCATCACACCAGTTTGTGCATTTCCCATAAACCCA +
Preference number: 5 (lower is better)
Translates to: APICPTIPPWGPTTF*GSGITPVCAFPINP
Trigger: TGGGTTTATGGGAAATGCACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACAAATGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS GCA 90 bp TTGGGGGCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTTGTaGATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCAT +
Preference number: 5 (lower is better)
Translates to: LGANNVLRKWHHTSL*ISHKPIGHGHAHHH
Trigger: ATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS GCA 90 bp TCCTGCTGTTGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGGGTTaGACTACTGATACTCATGCCAGCCATCTGCTGATTCATCTACTA +
Preference number: 5 (lower is better)
Translates to: SCCCAGGLAKTCSRG*TTDTHASHLLIHLL
Trigger: TAGTAGATGAATCAGCAGATGGCTGGCATGAGTATCAGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS CCA 90 bp ATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCTTaGACTCTGTCCCATCACATTTCCTATAAGGCCAGGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ISHKPIGHGHAHHHA*TLSHHISYKARSCR
Trigger: CCTGCAGCTCCTGGCCTTATAGGAAATGTGATGGGACAGAGTCCAAGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGACGTGTCCCGCCTCCTaGACCGGCCTGCCGGCACGC +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMTCPAS*TGLPAR
Trigger: GCGTGCCGGCAGGCCGGTCAAGGAGGCGGGACACGT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316999.9
ENST00000370452.7
CDS CCA 90 bp TTGTCCCACCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTaGCATCACACCAGTTTGTGCATTTCCCATAAACCCATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: LSHHSSLGANNVLRK*HHTSLCISHKPIGH
Trigger: ATGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTCAGGGGTGGCACCGTaGTGTTCCCGTTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGSGVAP*CSRWSL
Trigger: CAGTGACCAACGGGAACACAACGGTGCCACCCCTGA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGCTGGGGCTGCTGAGCTaGCGGCAGGCCAAACTTACT +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGLGLLS*RQAKLT
Trigger: AGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAG...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGCAGTCGGCGCAGTACTaGTTGTCCTCCTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGQSAQY*LSSSLR
Trigger: TCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTG...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATGCCCATCGAGGACCTTaGGCCTCGCAGTCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNAHRGP*ASQSAQ
Trigger: CTGCGCCGACTGCGAGGCCAAAGGTCCTCGATGGGC...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTCTGGGGCTGCTGAGCTaGCGGCAGGCCAAACTTACT +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVLGLLS*RQAKLT
Trigger: AGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAG...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTCCTCCCTCAGAAGCTaGGATAGGATGAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGSSLRS*DRMSWC
Trigger: GCACCAGCTCATCCTATCCAAGCTTCTGAGGGAGGA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CAA 90 bp TCATTACACTTGTGCTGCCCGACCTCGAGTGTCACCATGAAGAGTGCGCTACCCGATAAGATGGAGTCTTaGGAAAGTTGTTTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: SLHLCCPTSSVTMKSALPDKMES*ESCFFA
Trigger: GGCAAAGAAACAACTTTCCAAAGACTCCATCTTATC...GGGTAGCGCACTCTTCATGGTGACACTCGAGGTCGGGCAGCACAAGTGTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTTGCCCACCATCATGCTaGGACTCTGTCCCATCACAT +
Preference number: 5 (lower is better)
Translates to: ANNCTKVFITLVLPDLECCPPSC*DSVPSH
Trigger: ATGTGATGGGACAGAGTCCAAGCATGATGGTGGGCA...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTCCCACCATTCCTCCTaGGGGGCCAACAACGTTCTG +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVSHHSS*GANNVL
Trigger: CAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTCTGGGGTGCACCCATTaGTCCCACCATTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVLGCTH*SHHSSL
Trigger: CAAGGAGGAATGGTGGGACAAATGGGTGCACCCCAG...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTCCTCCCTCAGAAGCTaGGATAGGATGAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVSSLRS*DRMSWC
Trigger: GCACCAGCTCATCCTATCCAAGCTTCTGAGGGAGGA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CAA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTTCAGGGGTGGCACCGTaGTGTTCCCGTTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRSGVAP*CSRWSL
Trigger: CAGTGACCAACGGGAACACAACGGTGCCACCCCTGA...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTGCCCACCATCATGCTaGGACTCTGTCCCATCACAT +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGCPPSC*DSVPSH
Trigger: ATGTGATGGGACAGAGTCCAAGCATGATGGTGGGCA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTTCCCATAAACCCATaGGGCATGGGCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVFPINP*GMGMPT
Trigger: GGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACCTGGGGTGCACCCATTaGTCCCACCATTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QSKNWNRKQITALRYSLHLGCTH*SHHSSL
Trigger: CAAGGAGGAATGGTGGGACAAATGGGTGCACCCCAG...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTCAGACCATCCTGCTGTaGTGCTGGAGGGCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRQTILL*CWRAGQ
Trigger: TTGGCCAGCCCTCCAGCACAACAGCAGGATGGTCTG...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTTCGGCGCAGTACTTGTaGTCCTCCTCCCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRSAQYL*SSSLRS
Trigger: GCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCGA...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370455.8
CDS-3UTR CAA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTGTCCATTGGTCTAGGTaGACTGATTTGACCCTGGAT +
Preference number: 5 (lower is better)
Translates to: ANNCTKVFITLVLPDLECVHWSR*TDLTLD
Trigger: ATCCAGGGTCAAATCAGTCAACCTAGACCAATGGAC...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATCAGGGGTGGCACCGTaGTGTTCCCGTTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVSGVAP*CSRWSL
Trigger: CAGTGACCAACGGGAACACAACGGTGCCACCCCTGA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCATCCCACCATTCCTCCTaGGGGGCCAACAACGTTCTG +
Preference number: 5 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTASHHSS*GANNVL
Trigger: CAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGA...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTCTGGGGTGCACCCATTaGTCCCACCATTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRLGCTH*SHHSSL
Trigger: CAAGGAGGAATGGTGGGACAAATGGGTGCACCCCAG...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGCTGGGGCTGCTGAGCTaGCGGCAGGCCAAACTTACT +
Preference number: 5 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWLGLLS*RQAKLT
Trigger: AGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAG...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGCTGGGGCTGCTGAGCTaGCGGCAGGCCAAACTTACT +
Preference number: 5 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMLGLLS*RQAKLT
Trigger: AGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAG...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGCAGACCATCCTGCTGTaGTGCTGGAGGGCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWQTILL*CWRAGQ
Trigger: TTGGCCAGCCCTCCAGCACAACAGCAGGATGGTCTG...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCAGACCATCCTGCTGTaGTGCTGGAGGGCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMQTILL*CWRAGQ
Trigger: TTGGCCAGCCCTCCAGCACAACAGCAGGATGGTCTG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTGTACAGCAGCCTTTCTaGTCATCTGATGGACATCTG +
Preference number: 5 (lower is better)
Translates to: ANNCTKVFITLVLPDLECVQQPF*SSDGHL
Trigger: CAGATGTCCATCAGATGACAAGAAAGGCTGCTGTAC...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGAGGTATTCATTACACTaGTGCTGCCCGACCTCGAGT +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGRYSLH*CCPTSS
Trigger: ACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS TCA 90 bp CTAAAGGACATTTTAACCACCTTGTCATTGGCCAGTAGATTGCACTaGTGGAGTGCTGGAGAACAGCATCACCCTTCTGCATTATCTGTG +
Preference number: 5 (lower is better)
Translates to: LKDILTTLSLASRLH*WSAGEQHHPSALSV
Trigger: CACAGATAATGCAGAAGGGTGATGCTGTTCTCCAGCACTCCATCAGTGCAATCTACTGGCCAATGACAAGGTGGTTAAAATGTCCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR CAA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCATCCTCCCTCAGAAGCTaGGATAGGATGAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTASSLRS*DRMSWC
Trigger: GCACCAGCTCATCCTATCCAAGCTTCTGAGGGAGGA...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370455.8
CDS-3UTR CAA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATCGGCGCAGTACTTGTaGTCCTCCTCCCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVSAQYL*SSSLRS
Trigger: GCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCGA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CAA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGCAGTCGGCGCAGTACTaGTTGTCCTCCTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWQSAQY*LSSSLR
Trigger: TCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTG...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGGTCCATTGGTCTAGGTaGACTGATTTGACCCTGGAT +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGVHWSR*TDLTLD
Trigger: ATCCAGGGTCAAATCAGTCAACCTAGACCAATGGAC...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGACCGTTGTGTTCCCGTaGGTCACTGGTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMTVVFP*VTGATA
Trigger: TGCTGTGGCACCAGTGACCAACGGGAACACAACGGT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGACCGTTGTGTTCCCGTaGGTCACTGGTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMTVVFP*VTGATA
Trigger: TGCTGTGGCACCAGTGACCAACGGGAACACAACGGT...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATACCGTTGTGTTCCCGTaGGTCACTGGTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNTVVFP*VTGATA
Trigger: TGCTGTGGCACCAGTGACCAACGGGAACACAACGGT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTGGCATCACACCAGTTaGTGCATTTCCCATAAACCC +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGWHHTS*CISHKP
Trigger: GGGTTTATGGGAAATGCACAAACTGGTGTGATGCCA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTCCCACCATTCCTCCTaGGGGGCCAACAACGTTCTG +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNSHHSS*GANNVL
Trigger: CAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTTCCCACCATTCCTCCTaGGGGGCCAACAACGTTCTG +
Preference number: 5 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFSHHSS*GANNVL
Trigger: CAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGA...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCTGGGGTGCACCCATTaGTCCCACCATTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMLGCTH*SHHSSL
Trigger: CAAGGAGGAATGGTGGGACAAATGGGTGCACCCCAG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTGTACAGCAGCCTTTCTaGTCATCTGATGGACATCTG +
Preference number: 5 (lower is better)
Translates to: EKVNLANEPKYHLDTVKIVQQPF*SSDGHL
Trigger: CAGATGTCCATCAGATGACAAGAAAGGCTGCTGTAC...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTAGGTATTCATTACACTaGTGCTGCCCGACCTCGAGT +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVRYSLH*CCPTSS
Trigger: ACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATCGGCGCAGTACTTGTaGTCCTCCTCCCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCISAQYL*SSSLRS
Trigger: GCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCGA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS-3UTR CAA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTGAAAAATTCCACTGCTaGATCTGTCTGTGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: EKVNLANEPKYHLDTVKIEKFHC*ICLWSS
Trigger: CGAAGACCACAGACAGATCAAGCAGTGGAATTTTTC...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTGGAGTCTTTGGAAAGTaGTTTCTTTGCCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: ANNCTKVFITLVLPDLECGVFGK*FLCHFF
Trigger: GAAGAAGTGGCAAAGAAACAACTTTCCAAAGACTCC...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTACACCAGGAGTACTTaGCTGTTGAATGGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGYTRST*LLNGSC
Trigger: ACAGGAACCATTCAACAGCAAAGTACTCCTGGTGTA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTTGCCCACCATCATGCTaGGACTCTGTCCCATCACAT +
Preference number: 5 (lower is better)
Translates to: AVSLQVILSNPKAVFKRRCPPSC*DSVPSH
Trigger: ATGTGATGGGACAGAGTCCAAGCATGATGGTGGGCA...ACGACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTTGAAGACTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTTTCCCATAAACCCATaGGGCATGGGCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNFPINP*GMGMPT
Trigger: GGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATTTCCCATAAACCCATaGGGCATGGGCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVFPINP*GMGMPT
Trigger: GGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTGGCATCACACCAGTTaGTGCATTTCCCATAAACCC +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVWHHTS*CISHKP
Trigger: GGGTTTATGGGAAATGCACAAACTGGTGTGATGCCA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTTTTCATTTCCACAGTaGTGTGCTGAGAGTCTGACC +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGFSFPQ*CAESLT
Trigger: GGTCAGACTCTCAGCACACAACTGTGGAAATGAAAA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTTGTCAACAGCAGCTaGCAGAGAAGGAGAGGATAC +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVFVNSS*QRRRGY
Trigger: GTATCCTCTCCTTCTCTGCAAGCTGCTGTTGACAAA...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTGTAGACTTGAACAGGTaGGTAGACTTGAACAGGTTT +
Preference number: 5 (lower is better)
Translates to: ANNCTKVFITLVLPDLECVDLNR*VDLNRF
Trigger: AAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTAC...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTATGGAAGAGGATGTTaGGAGTTTAGGCTACAGAGC +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGYGRGC*EFRLQS
Trigger: GCTCTGTAGCCTAAACTCCAAACATCCTCTTCCATA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTGCAGAGATAAAAGCCTaGTACAAAAGCTGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: EKVNLANEPKYHLDTVKIAEIKA*YKSCQV
Trigger: CACCTGACAGCTTTTGTACAAGGCTTTTATCTCTGC...AATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTTGGCTAGATTAACCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619054.4
CDS TCA 90 bp TTTTTGTCAACAGCAGCTTGCAGAGAAGGAGAGGATACCAAAGGCTaGAGAGGAGCATCAGAGGAGGAAATATTTGTAATAGCTATGGCA +
Preference number: 5 (lower is better)
Translates to: FLSTAACREGEDTKG*RGASEEEIFVIAMA
Trigger: TGCCATAGCTATTACAAATATTTCCTCCTCTGATGCTCCTCTTCAGCCTTTGGTATCCTCTCCTTCTCTGCAAGCTGCTGTTGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370455.8
ENST00000439432.1
ENST00000445046.1
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTAGGAGTACTTTGCTGTaGAATGGTTCCTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVRSTLL*NGSCAI
Trigger: TATGGCACAGGAACCATTCAACAGCAAAGTACTCCT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATTTCCCATAAACCCATaGGGCATGGGCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIFPINP*GMGMPT
Trigger: GGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGAGCAACTGGTGCAGTTaGTCCAGCCAGTGGATCCAT +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMSNWCS*SSQWIH
Trigger: ATGGATCCACTGGCTGGACAAACTGCACCAGTTGCT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTAGCAACTGGTGCAGTTaGTCCAGCCAGTGGATCCAT +
Preference number: 5 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFSNWCS*SSQWIH
Trigger: ATGGATCCACTGGCTGGACAAACTGCACCAGTTGCT...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGAGTATTTCCCATATCTaGCATGCACTGTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGSISHI*HALYLF
Trigger: GAACAGATACAGTGCATGCAAGATATGGGAAATACT...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACAGGAGTACTTTGCTGTaGAATGGTTCCTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: QSKNWNRKQITALRYSLHRSTLL*NGSCAI
Trigger: TATGGCACAGGAACCATTCAACAGCAAAGTACTCCT...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCTACACCAGGAGTACTTaGCTGTTGAATGGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: VVVLDETCIAVFISTVVCYTRST*LLNGSC
Trigger: ACAGGAACCATTCAACAGCAAAGTACTCCTGGTGTA...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATGCCCACCATCATGCTaGGACTCTGTCCCATCACAT +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCICPPSC*DSVPSH
Trigger: ATGTGATGGGACAGAGTCCAAGCATGATGGTGGGCA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GCAAATAACTGCACTAAGGTATTCATTACACTTGTGCTGCCCGACCTCGAGTGTTTTCACCACATCAAATaGAATCAGTACAGACCAACA +
Preference number: 5 (lower is better)
Translates to: ANNCTKVFITLVLPDLECFHHIK*NQYRPT
Trigger: TGTTGGTCTGTACTGATTCAATTTGATGTGGTGAAA...ACACTCGAGGTCGGGCAGCACAAGTGTAATGAATACCTTAGTGCAGTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTAGAGGAAAACTGATTTaGCAAGTTGAGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVRGKLI*QVEQLL
Trigger: GAGAAGCTGCTCAACTTGCAAAATCAGTTTTCCTCT...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTATTTGTCAACAGCAGCTaGCAGAGAAGGAGAGGATAC +
Preference number: 5 (lower is better)
Translates to: QQSKNWNRKQITALRYSLFVNSS*QRRRGY
Trigger: GTATCCTCTCCTTCTCTGCAAGCTGCTGTTGACAAA...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACTATGGAAGAGGATGTTaGGAGTTTAGGCTACAGAGC +
Preference number: 5 (lower is better)
Translates to: QSKNWNRKQITALRYSLHYGRGC*EFRLQS
Trigger: GCTCTGTAGCCTAAACTCCAAACATCCTCTTCCATA...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCAGAAAAATTCCACTGCTaGATCTGTCTGTGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAEKFHC*ICLWSS
Trigger: CGAAGACCACAGACAGATCAAGCAGTGGAATTTTTC...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CATTTGATCATACAGTACCTTCCTACAGGATTACTGGCTAATTTTGGGGTGGGGTGGAAAGTTGTTTCTTaGCCACTTCTTCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: HLIIQYLPTGLLANFGVGWKVVS*PLLLIL
Trigger: CAAAATCAGAAGAAGTGGCAAAGAAACAACTTTCCA...CCCCACCCCAAAATTAGCCAGTAATCCTGTAGGAAGGTACTGTATGATCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGTGGCATCACACCAGTTaGTGCATTTCCCATAAACCC +
Preference number: 5 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMWHHTS*CISHKP
Trigger: GGGTTTATGGGAAATGCACAAACTGGTGTGATGCCA...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTGGCATCACACCAGTTaGTGCATTTCCCATAAACCC +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNWHHTS*CISHKP
Trigger: GGGTTTATGGGAAATGCACAAACTGGTGTGATGCCA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATTGCAGTTGATTACTGGCTAATTTaGGGGTGGGGTTTATACTAT +
Preference number: 5 (lower is better)
Translates to: RFSKECQVVVLDETCIAVDYWLI*GWGLYY
Trigger: ATAGTATAAACCCCACCCCAAAATTAGCCAGTAATC...AACTGCAATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGTCCATTGGTCTAGGTaGACTGATTTGACCCTGGAT +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIVHWSR*TDLTLD
Trigger: ATCCAGGGTCAAATCAGTCAACCTAGACCAATGGAC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGAAAAATTCCACTGCTaGATCTGTCTGTGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMEKFHC*ICLWSS
Trigger: CGAAGACCACAGACAGATCAAGCAGTGGAATTTTTC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATAGGAGTACTTTGCTGTaGAATGGTTCCTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNRSTLL*NGSCAI
Trigger: TATGGCACAGGAACCATTCAACAGCAAAGTACTCCT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGTACACCAGGAGTACTTaGCTGTTGAATGGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWYTRST*LLNGSC
Trigger: ACAGGAACCATTCAACAGCAAAGTACTCCTGGTGTA...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTACACCAGGAGTACTTaGCTGTTGAATGGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMYTRST*LLNGSC
Trigger: ACAGGAACCATTCAACAGCAAAGTACTCCTGGTGTA...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGTTTTCATTTCCACAGTaGTGTGCTGAGAGTCTGACC +
Preference number: 5 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMFSFPQ*CAESLT
Trigger: GGTCAGACTCTCAGCACACAACTGTGGAAATGAAAA...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTATTTTCATTTCCACAGTaGTGTGCTGAGAGTCTGACC +
Preference number: 5 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVFSFPQ*CAESLT
Trigger: GGTCAGACTCTCAGCACACAACTGTGGAAATGAAAA...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTAAGAGGAAAACTGATTTaGCAAGTTGAGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: QQSKNWNRKQITALRYSLRGKLI*QVEQLL
Trigger: GAGAAGCTGCTCAACTTGCAAAATCAGTTTTCCTCT...TAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGAAAAATTCCACTGCTaGATCTGTCTGTGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIEKFHC*ICLWSS
Trigger: CGAAGACCACAGACAGATCAAGCAGTGGAATTTTTC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCTGGAAAGTTGTTTCTTaGCCACTTCTTCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: VVVLDETCIAVFISTVVCWKVVS*PLLLIL
Trigger: CAAAATCAGAAGAAGTGGCAAAGAAACAACTTTCCA...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR CAA 90 bp TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATGAAATCATGGGAAATATGGGAGTCTTTGGAAAGTaGTTTCTTTGCCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: CKLSSFSNNAVHEIMGNMGVFGK*FLCHFF
Trigger: GAAGAAGTGGCAAAGAAACAACTTTCCAAAGACTCC...CATATTTCCCATGATTTCATGTACTGCATTATTTGAGAAGCTGCTCAACTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAAGGAGTACTTTGCTGTaGAATGGTTCCTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIRSTLL*NGSCAI
Trigger: TATGGCACAGGAACCATTCAACAGCAAAGTACTCCT...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATTTTCATTTCCACAGTaGTGTGCTGAGAGTCTGACC +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIFSFPQ*CAESLT
Trigger: GGTCAGACTCTCAGCACACAACTGTGGAAATGAAAA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GTGGTAGTTCTGGATGAAACTTGTATTGCAGTTTTCATTTCCACAGTTGTGTGCTTTCACCACATCAAATaGAATCAGTACAGACCAACA +
Preference number: 5 (lower is better)
Translates to: VVVLDETCIAVFISTVVCFHHIK*NQYRPT
Trigger: TGTTGGTCTGTACTGATTCAATTTGATGTGGTGAAA...GCACACAACTGTGGAAATGAAAACTGCAATACAAGTTTCATCCAGAACTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATAGAGGAAAACTGATTTaGCAAGTTGAGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNRGKLI*QVEQLL
Trigger: GAGAAGCTGCTCAACTTGCAAAATCAGTTTTCCTCT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGGTAGACTTGAACAGGTaGGTAGACTTGAACAGGTTT +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMVDLNR*VDLNRF
Trigger: AAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTAC...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTATTCATTACACAGTCTTCAAGTCATTTaGTCCAATCCAAAAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QSKNWNRKQITALRYSLHSLQVI*SNPKAV
Trigger: TACAGCTTTTGGATTGGACAAAATGACTTGAAGACT...GTGTAATGAATACCTTAGTGCAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp GAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGAGTATTTCCCATATCTaGCATGCACTGTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: ESVQTNTVNQIILNMNKWSISHI*HALYLF
Trigger: GAACAGATACAGTGCATGCAAGATATGGGAAATACT...CCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGAGTATTTCCCATATCTaGCATGCACTGTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMSISHI*HALYLF
Trigger: GAACAGATACAGTGCATGCAAGATATGGGAAATACT...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCATGGAAAGTTGTTTCTTaGCCACTTCTTCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAWKVVS*PLLLIL
Trigger: CAAAATCAGAAGAAGTGGCAAAGAAACAACTTTCCA...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGGAGTCTTTGGAAAGTaGTTTCTTTGCCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIGVFGK*FLCHFF
Trigger: GAAGAAGTGGCAAAGAAACAACTTTCCAAAGACTCC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATGATAAGATGGAGTCTTaGGAAAGTTGTTTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNDKMES*ESCFFA
Trigger: GGCAAAGAAACAACTTTCCAAAGACTCCATCTTATC...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATATGAACAAATGGGTAGATAAGATGGAGTCTTaGGAAAGTTGTTTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: SVQTNTVNQIILNMNKWVDKMES*ESCFFA
Trigger: GGCAAAGAAACAACTTTCCAAAGACTCCATCTTATC...TACCCATTTGTTCATATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCATTTCACCACATCAAATaGAATCAGTACAGACCAACA +
Preference number: 5 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAFHHIK*NQYRPT
Trigger: TGTTGGTCTGTACTGATTCAATTTGATGTGGTGAAA...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGACATTTTAACCACCTaGTCATTGGCCAGTAGATTG +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIDILTT*SLASRL
Trigger: CAATCTACTGGCCAATGACAAGGTGGTTAAAATGTC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS-3UTR CAA 90 bp TGGAGTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTTACTTCAGTACAGCACAGAGCATTCAGGTATaGTTTGTTTTACTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: WSLGYRAFRYCLFYFSTAQSIQV*FVLLQY
Trigger: GTACTGAAGTAAAACAAACAATACCTGAATGCTCTG...TGCTGTACTGAAGTAAAACAAACAATACCTGAATGCTCTGTAGCCTAAACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATAAATTGAGGTATAAATaGAAGCAGCAACTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNKLRYK*KQQLVQ
Trigger: CTGCACCAGTTGCTGCTTCAATTTATACCTCAATTT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTTGCCCTTATAATTGGTAGACTTGAACAGGTTGGTAGACTTGAACAGGTTTTTAAATTGAGGTATAAATaGAAGCAGCAACTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: FALIIGRLEQVGRLEQVFKLRYK*KQQLVQ
Trigger: CTGCACCAGTTGCTGCTTCAATTTATACCTCAATTT...AAAAACCTGTTCAAGTCTACCAACCTGTTCAAGTCTACCAATTATAAGGGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAAGTATTTCCCATATCTaGCATGCACTGTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCISISHI*HALYLF
Trigger: GAACAGATACAGTGCATGCAAGATATGGGAAATACT...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATTGGAAAGTTGTTTCTTaGCCACTTCTTCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNWKVVS*PLLLIL
Trigger: CAAAATCAGAAGAAGTGGCAAAGAAACAACTTTCCA...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGATAAGATGGAGTCTTaGGAAAGTTGTTTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIDKMES*ESCFFA
Trigger: GGCAAAGAAACAACTTTCCAAAGACTCCATCTTATC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp TTAGTTACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGCAGAGCATTCAGGTATaGTTTGTTTTACTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: LVTLFAYSAEKGLHVSTMQSIQV*FVLLQY
Trigger: GTACTGAAGTAAAACAAACAATACCTGAATGCTCTG...CATAGTGCTAACATGAAGACCTTTTTCTGCACTATATGCAAACAGGGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CCACATCAAATTGAATCAGTACAGACCAACACGGTCAATCAGATCATTCTTAATAGTCTTCAAGTCATTTaGTCCAATCCAAAAGCTGTA +
Preference number: 5 (lower is better)
Translates to: PHQIESVQTNTVNQIILNSLQVI*SNPKAV
Trigger: TACAGCTTTTGGATTGGACAAAATGACTTGAAGACT...ATTAAGAATGATCTGATTGACCGTGTTGGTCTGTACTGATTCAATTTGATGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATATTTCACCACATCAAATaGAATCAGTACAGACCAACA +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIFHHIK*NQYRPT
Trigger: TGTTGGTCTGTACTGATTCAATTTGATGTGGTGAAA...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS-3UTR CAA 90 bp CAAGGATTGAAGATTGAAAGTGGCTTTGTTTTAGTTAGTTACCCTGTTTGCATAGCATTCAGGTATTGTTaGTTTTACTTCAGTACAGCA +
Preference number: 5 (lower is better)
Translates to: QGLKIESGFVLVSYPVCIAFRYC*FYFSTA
Trigger: TGCTGTACTGAAGTAAAACAAACAATACCTGAATGC...TATGCAAACAGGGTAACTAACTAAAACAAAGCCACTTTCAATCTTCAATCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370455.8
ENST00000619054.4
CDS CCA 72 bp CGGACGCTGGCTGGAGCCGGGCAGAGTGAACGCACCTaGCGCCGCCGGGACCGCGGGCGGACTCAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: RTLAGAGQSERT*RRRDRGRTQPR
Trigger: CCTGGGCTGAGTCCGCCCGCGGTCCCGGCGGCGCCAGGTGCGTTCACTCTGCCCGGCTCCAGCCAGCGTCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS CCA 72 bp CGGGGAGCCTGGGGCAGCTACGGCGGCGGCGGACGCTaGCTGGAGCCGGGCAGAGTGAACGCACCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: RGAWGSYGGGGR*LEPGRVNAPGA
Trigger: GGCGCCAGGTGCGTTCACTCTGCCCGGCTCCAGCCAGCGTCCGCCGCCGCCGTAGCTGCCCCAGGCTCCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS CAA 72 bp GCGGTGGCGGTGGTAGCGCCGACGTGTCCCGCCTCCTaGACCGGCCTGCCGGCACGCACCACCCTAGCCGGC +
Preference number: 6 (lower is better)
Translates to: AVAVVAPTCPAS*TGLPARTTLAG
Trigger: GCCGGCTAGGGTGGTGCGTGCCGGCAGGCCGGTCAAGGAGGCGGGACACGTCGGCGCTACCACCGCCACCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316999.9
ENST00000370452.7
CDS CCA 72 bp AGGAGACCAAGAATCCGAGCCCGGAGTGGGAGGACGTaGTCACACCGGAGGGTAGAGGAGGGGATCCAGACC +
Preference number: 6 (lower is better)
Translates to: RRPRIRARSGRT*SHRRVEEGIQT
Trigger: GGTCTGGATCCCCTCCTCTACCCTCCGGTGTGACCACGTCCTCCCACTCCGGGCTCGGATTCTTGGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619054.4
CDS TCA 72 bp TTGGATAGGATGAGCTGGTGCTGCTCGTTCAGCTTCTaGGCCTTCTCCCGACAGGAGCGCGTCGCCATCTCG +
Preference number: 6 (lower is better)
Translates to: LDRMSWCCSFSF*AFSRQERVAIS
Trigger: CGAGATGGCGACGCGCTCCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCAGCACCAGCTCATCCTATCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS GCA 72 bp CCCAGATGTTACTGTAGACAGGGTTGCAGCTGCTGGTaGAGAGGGTGTCCCCTGAGCTGGGGGCATGACAGT +
Preference number: 6 (lower is better)
Translates to: PRCYCRQGCSCW*RGCPLSWGHDS
Trigger: ACTGTCATGCCCCCAGCTCAGGGGACACCCTCTGCACCAGCAGCTGCAACCCTGTCTACAGTAACATCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 90 bp GAAGCCCATCGAGGACCTTTGGCCTCGCAGTCGGCGCAGTACTTGTaGTCCTCCTCCCTCAGAAGCTTGGATAGGATGAGCTGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: EAHRGPLASQSAQYL*SSSLRSLDRMSWCC
Trigger: GCAGCACCAGCTCATCCTATCCAAGCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCTCGATGGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS CAA 90 bp CAGGAAGCCCATCGAGGACCTTTGGCCTCGCAGTCGGCGCAGTACTaGTTGTCCTCCTCCCTCAGAAGCTTGGATAGGATGAGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: QEAHRGPLASQSAQY*LSSSLRSLDRMSWC
Trigger: GCACCAGCTCATCCTATCCAAGCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCTCGATGGGCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS CAA 90 bp CTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCATTaGTCCCACCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LLSLRQAKLTLGCTH*SHHSSLGANNVLRK
Trigger: CTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACAAATGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CCA 72 bp GATCATCGTTCAGGGGTGGCACCGTTGTGTTCCCGTTaGTCACTGGTGCCACAGCAGGGCCATCAAGTCCTA +
Preference number: 6 (lower is better)
Translates to: DHRSGVAPLCSR*SLVPQQGHQVL
Trigger: TAGGACTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGGAACACAACGGTGCCACCCCTGAACGATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 72 bp CGAGGACCTTTGGCCTCGCAGTCGGCGCAGTACTTGTaGTCCTCCTCCCTCAGAAGCTTGGATAGGATGAGC +
Preference number: 6 (lower is better)
Translates to: RGPLASQSAQYL*SSSLRSLDRMS
Trigger: GCTCATCCTATCCAAGCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS CAA 72 bp AGATCATCGTTCAGGGGTGGCACCGTTGTGTTCCCGTaGGTCACTGGTGCCACAGCAGGGCCATCAAGTCCT +
Preference number: 6 (lower is better)
Translates to: RSSFRGGTVVFP*VTGATAGPSSP
Trigger: AGGACTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGGAACACAACGGTGCCACCCCTGAACGATGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 72 bp CAAAGATGTCCAGATCATCGTTCAGGGGTGGCACCGTaGTGTTCCCGTTGGTCACTGGTGCCACAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: QRCPDHRSGVAP*CSRWSLVPQQG
Trigger: GCCCTGCTGTGGCACCAGTGACCAACGGGAACACAACGGTGCCACCCCTGAACGATGATCTGGACATCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 90 bp TCATCGGTCCAAAGATGTCCAGATCATCGTTCAGGGGTGGCACCGTaGTGTTCCCGTTGGTCACTGGTGCCACAGCAGGGCCATCAAGTC +
Preference number: 6 (lower is better)
Translates to: SSVQRCPDHRSGVAP*CSRWSLVPQQGHQV
Trigger: GACTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGGAACACAACGGTGCCACCCCTGAACGATGATCTGGACATCTTTGGACCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS GCA 72 bp ACTCTGTCCCATCACATTTCCTATAAGGCCAGGAGCTaGAGGCACAGGCACGCCCATCGATGGAAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: TLSHHISYKARS*RHRHAHRWKAL
Trigger: CAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCTGGCCTTATAGGAAATGTGATGGGACAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS GCA 72 bp CCATCCTGCTGTTGTGCTGGAGGGCTGGCCAAAACCTaGAGTAGGGGTTGCACTACTGATACTCATGCCAGC +
Preference number: 6 (lower is better)
Translates to: PSCCCAGGLAKT*SRGCTTDTHAS
Trigger: GCTGGCATGAGTATCAGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CCA 72 bp CATCGGTCCAAAGATGTCCAGATCATCGTTCAGGGGTaGCACCGTTGTGTTCCCGTTGGTCACTGGTGCCAC +
Preference number: 6 (lower is better)
Translates to: HRSKDVQIIVQG*HRCVPVGHWCH
Trigger: GTGGCACCAGTGACCAACGGGAACACAACGGTGCCACCCCTGAACGATGATCTGGACATCTTTGGACCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 72 bp CATCGAGGACCTTTGGCCTCGCAGTCGGCGCAGTACTaGTTGTCCTCCTCCCTCAGAAGCTTGGATAGGATG +
Preference number: 6 (lower is better)
Translates to: HRGPLASQSAQY*LSSSLRSLDRM
Trigger: CATCCTATCCAAGCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCTCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS CAA 72 bp ACTCTGGGGTGCACCCATTTGTCCCACCATTCCTCCTaGGGGGCCAACAACGTTCTGAGGAAGTGGCATCAC +
Preference number: 6 (lower is better)
Translates to: TLGCTHLSHHSS*GANNVLRKWHH
Trigger: GTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACAAATGGGTGCACCCCAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 72 bp TTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCATTaGTCCCACCATTCCTCCTTGGGGGCCAACAACGTT +
Preference number: 6 (lower is better)
Translates to: LRQAKLTLGCTH*SHHSSLGANNV
Trigger: AACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACAAATGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CCA 72 bp GAGCTTCCAGACCATCCTGCTGTTGTGCTGGAGGGCTaGCCAAAACCTGCAGTAGGGGTTGCACTACTGATA +
Preference number: 6 (lower is better)
Translates to: ELPDHPAVVLEG*PKPAVGVALLI
Trigger: TATCAGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGGTCTGGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 72 bp TCGGCGCAGTACTTGTTGTCCTCCTCCCTCAGAAGCTaGGATAGGATGAGCTGGTGCTGCTCGTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SAQYLLSSSLRS*DRMSWCCSFSF
Trigger: GAAGCTGAACGAGCAGCACCAGCTCATCCTATCCAAGCTTCTGAGGGAGGAGGACAACAAGTACTGCGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS CAA 90 bp AAGATGTCCAGATCATCGTTCAGGGGTGGCACCGTTGTGTTCCCGTaGGTCACTGGTGCCACAGCAGGGCCATCAAGTCCTAAAAGATCC +
Preference number: 6 (lower is better)
Translates to: KMSRSSFRGGTVVFP*VTGATAGPSSPKRS
Trigger: GGATCTTTTAGGACTTGATGGCCCTGCTGTGGCACCAGTGACCAACGGGAACACAACGGTGCCACCCCTGAACGATGATCTGGACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 90 bp GCCAAACTTACTCTGGGGTGCACCCATTTGTCCCACCATTCCTCCTaGGGGGCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTTG +
Preference number: 6 (lower is better)
Translates to: AKLTLGCTHLSHHSS*GANNVLRKWHHTSL
Trigger: CAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACAAATGGGTGCACCCCAGAGTAAGTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS TCA 72 bp GCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTaGAATGCAGCTGGTGCTTGTGAGGTAAATGGTATA +
Preference number: 6 (lower is better)
Translates to: AAGTGTPIDGKP*NAAGACEVNGI
Trigger: TATACCATTTACCTCACAAGCACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS TCA 72 bp TGTCCCACCATTCCTCCTTGGGGGCCAACAACGTTCTaGGGAAGTGGCATCACACCAGTTTGTGCATTTCCC +
Preference number: 6 (lower is better)
Translates to: CPTIPPWGPTTF*GSGITPVCAFP
Trigger: GGGAAATGCACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS GCA 72 bp TGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGGGTTaGACTACTGATACTCATGCCAGCCATCTGCTGATT +
Preference number: 6 (lower is better)
Translates to: CAGGLAKTCSRG*TTDTHASHLLI
Trigger: AATCAGCAGATGGCTGGCATGAGTATCAGTAGTGCAACCCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 90 bp TCCTTGGGGGCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTaGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCAT +
Preference number: 6 (lower is better)
Translates to: SLGANNVLRKWHHTS*CISHKPIGHGHAHH
Trigger: ATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS TCA 72 bp ACTTGTTGTCCTCCTCCCTCAGAAGCTTGGATAGGATaGGCTGGTGCTGCTCGTTCAGCTTCTGAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: TCCPPPSEAWIG*AGAARSASEPS
Trigger: AGAAGGCTCAGAAGCTGAACGAGCAGCACCAGCTCATCCTATCCAAGCTTCTGAGGGAGGAGGACAACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
CDS CCA 72 bp AAACCCATTGGGCATGGGCATGCCCACCATCATGCTTaGACTCTGTCCCATCACATTTCCTATAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: KPIGHGHAHHHA*TLSHHISYKAR
Trigger: CCTGGCCTTATAGGAAATGTGATGGGACAGAGTCCAAGCATGATGGTGGGCATGCCCATGCCCAATGGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 72 bp GGCATCACACCAGTTTGTGCATTTCCCATAAACCCATaGGGCATGGGCATGCCCACCATCATGCTTGGACTC +
Preference number: 6 (lower is better)
Translates to: GITPVCAFPINP*GMGMPTIMLGL
Trigger: GAGTCCAAGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGTGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CCA 72 bp CATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTaGCATCACACCAGTTTGTGCATTTCCCATAAACCC +
Preference number: 6 (lower is better)
Translates to: HSSLGANNVLRK*HHTSLCISHKP
Trigger: GGGTTTATGGGAAATGCACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS GCA 72 bp AACAACGTTCTGAGGAAGTGGCATCACACCAGTTTGTaGATTTCCCATAAACCCATTGGGCATGGGCATGCC +
Preference number: 6 (lower is better)
Translates to: NNVLRKWHHTSL*ISHKPIGHGHA
Trigger: GGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS CAA 72 bp GCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTaGTGCATTTCCCATAAACCCATTGGGCATGGGCAT +
Preference number: 6 (lower is better)
Translates to: ANNVLRKWHHTS*CISHKPIGHGH
Trigger: ATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4
CDS TCA 72 bp ATTTTAACCACCTTGTCATTGGCCAGTAGATTGCACTaGTGGAGTGCTGGAGAACAGCATCACCCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: ILTTLSLASRLH*WSAGEQHHPSA
Trigger: TGCAGAAGGGTGATGCTGTTCTCCAGCACTCCATCAGTGCAATCTACTGGCCAATGACAAGGTGGTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370452.7
CDS CCA 72 bp GCTGTTGAATGGTTCCTGTGCCATACAGAGATAAGATaGAGTCTTTGGAAAGTTGTTTCTTTGCCACTTCTT +
Preference number: 6 (lower is better)
Translates to: AVEWFLCHTEIR*SLWKVVSLPLL
Trigger: AAGAAGTGGCAAAGAAACAACTTTCCAAAGACTCCATCTTATCTCTGTATGGCACAGGAACCATTCAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316999.9
ENST00000370452.7
ENST00000370455.8
ENST00000619054.4