Pregenerated sensors for SMAD7 (Homo sapiens)
Ensembl gene IDs: ENSG00000101665Ensembl transcript IDs: ENST00000262158.7, ENST00000262158.8, ENST00000545051.2, ENST00000585986.1, ENST00000586093.1, ENST00000587336.1, ENST00000588190.1, ENST00000589634.1, ENST00000591805.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACAAAGAGCACGTTGTCTCCCCATCTGCCGCTCCTGCACACGCGTaGACACACAGCCGCACACTCACACTCACACACACTCCTGACAAG | + |
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Preference number: 1 (lower is better) Translates to: NKEHVVSPSAAPAHA*THSRTLTLTHTPDK Trigger: CTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGTGTGTGCACGCGTGTGCAGGAGCGGCAGATGGGGAGACAACGTGCTCTTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR GCA 90 bp | AGAGACACAAAACAAAGAGCACGTTGTCTCCCCATCTGCCGCTCCTaGACACGCGTGCACACACAGCCGCACACTCACACTCACACACAC | + |
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Preference number: 1 (lower is better) Translates to: RDTKQRARCLPICRS*TRVHTQPHTHTHTH Trigger: GTGTGTGTGAGTGTGAGTGTGCGGCTGTGTGTGCACGCGTGTGCAGGAGCGGCAGATGGGGAGACAACGTGCTCTTTGTTTTGTGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR TCA 90 bp | ATGCTCATTGAGCTAAGAACAGTGTCGAAGTATCATACGAGTGTATaGGTTGTAGAAGAAATGAAAGAAGAGTTAGGTGTCAGCCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: MLIELRTVSKYHTSV*VVEEMKEELGVSLG Trigger: TCCTAGGCTGACACCTAACTCTTCTTTCATTTCTTCTACAACTCATACACTCGTATGATACTTCGACACTGTTCTTAGCTCAATGAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGACATCCCCGCTTGCTGGCCTAATAGCAGAGCTTAACACACAGGATGGGCTGGGGACAGAGCCGTaGTCCTGGCAGCTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: PGTSPLAGLIAELNTQDGLGTEP*SWQLLG Trigger: TCCCAGCAGCTGCCAGGAGCACGGCTCTGTCCCCAG...CCCATCCTGTGTGTTAAGCTCTGCTATTAGGCCAGCAAGCGGGGATGTCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR CCA 90 bp | CAATACTGTGAGGGGGCTGCCCCGGCAGCCCTTGGGAAGCCCATCTCAGGGAGAAGGAGAGACACCGCTTaGGACTGCAAACCTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QYCEGAAPAALGKPISGRRRDTA*DCKPLC Trigger: GCAGAGAGGTTTGCAGTCCCAAGCGGTGTCTCTCCT...TCTCCCTGAGATGGGCTTCCCAAGGGCTGCCGGGGCAGCCCCCTCACAGTATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR TCA 90 bp | GCTTGCCCAGGTACTGCCTCTGCCCCACTGAGCGTGTCCAAGGGGCAGGAGAGAAGCAGCAAAGTAGTTTaGAGTGTGGCCTGCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ACPGTASAPLSVSKGQERSSKVV*SVACSA Trigger: AGCTGAGCAGGCCACACTTCAAACTACTTTGCTGCT...TCTCTCCTGCCCCTTGGACACGCTCAGTGGGGCAGAGGCAGTACCTGGGCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAAAAAGCAGCAAAGTAGTTTaGAGTGTGGCCTGCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PLFLSGCPADHTCPFFQKSSKVV*SVACSA Trigger: AGCTGAGCAGGCCACACTTCAAACTACTTTGCTGCT...TTTTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000262158.7 ENST00000591805.5 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGGAAGGGAATAAGACAAGGATGAAAATAATTGGTTCTGGTTCGGCCACTCCCAGGTACTGCCTCTaGCCCACTGAGCGTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: WQEGNKTRMKIIGSGSATPRYCL*PTERVQ Trigger: TTGGACACGCTCAGTGGGGCAGAGGCAGTACCTGGG...AGTGGCCGAACCAGAACCAATTATTTTCATCCTTGTCTTATTCCCTTCCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCGCACACTCACACTCACACACACTCCTGACAAGTGAAATGATGACCGCCGTGTTTGGTGGTGCTTaGATTTCTGCTTCCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TAAHSHSHTLLTSEMMTAVFGGA*ISASPL Trigger: AAGAGGGGAAGCAGAAATCCAAGCACCACCAAACAC...GGCGGTCATCATTTCACTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262158.7 ENST00000591805.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGACATCCCCGCTTGCTGGCCTAATAGCAGAGCTTAACACACAGGATGGGTTCATACACTGTGTTTaGTGGTGCTTGGATTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PGTSPLAGLIAELNTQDGFIHCV*WCLDFC Trigger: GCAGAAATCCAAGCACCACCAAACACAGTGTATGAA...CCCATCCTGTGTGTTAAGCTCTGCTATTAGGCCAGCAAGCGGGGATGTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR GCA 90 bp | ACTGCAAACCTCTCTGCTGGGGACATCCATAAGAGACACAAAACAAAGAGCACGCACTGTGTTTGGTGGTaGTTGGATTTCTGCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TANLSAGDIHKRHKTKSTHCVWW*LDFCFP Trigger: GGGGAAGCAGAAATCCAAGCACCACCAAACACAGTG...CGTGCTCTTTGTTTTGTGTCTCTTATGGATGTCCCCAGCAGAGAGGTTTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR TCA 72 bp | AGCCGCCAGCTTGCCCAGGTACTGCCTCTGCCCCACTaGGCGTGTCCAAGGGGCAGGAGAGACACCGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SRQLAQVLPLPH*ACPRGRRDTAW Trigger: CCAAGCGGTGTCTCTCCTGCCCCTTGGACACGCTCAGTGGGGCAGAGGCAGTACCTGGGCAAGCTGGCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR GCA 72 bp | CACGTTGTCTCCCCATCTGCCGCTCCTGCACACGCGTaGACACACAGCCGCACACTCACACTCACACACACT | + |
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Preference number: 3 (lower is better) Translates to: HVVSPSAAPAHA*THSRTLTLTHT Trigger: AGTGTGTGTGAGTGTGAGTGTGCGGCTGTGTGTGCACGCGTGTGCAGGAGCGGCAGATGGGGAGACAACGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR CAA 90 bp | GCTTGCCCAGGTACTGCCTCTGCCCCACTGAGCGTGTCCAAGGGGCAGGAGAGATGTGTTTGGTGGTGCTaGGATTTCTGCTTCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: ACPGTASAPLSVSKGQERCVWWC*DFCFPS Trigger: AGAGGGGAAGCAGAAATCCAAGCACCACCAAACACA...TCTCTCCTGCCCCTTGGACACGCTCAGTGGGGCAGAGGCAGTACCTGGGCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGTTATGACGGACCAAATCCTTCTTGGAGGGAAGGGGACTGCTAAGCATGTCACCCCAGCCGCCAGCTaGCCCAGGTACTGCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: WVMTDQILLGGKGTAKHVTPAAS*PRYCLC Trigger: GCAGAGGCAGTACCTGGGCAAGCTGGCGGCTGGGGT...GACATGCTTAGCAGTCCCCTTCCCTCCAAGAAGGATTTGGTCCGTCATAACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR TCA 72 bp | GAGTTAGGTGTCAGCCTAGGATGGTACCTTGGGTTATaGCGGACCAAATCCTTCTTGGAGGGAAGGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: ELGVSLGWYLGL*RTKSFLEGRGL Trigger: CAGTCCCCTTCCCTCCAAGAAGGATTTGGTCCGTCATAACCCAAGGTACCATCCTAGGCTGACACCTAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR-3UTR CAA 90 bp | TTCCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAAAAACGACCAAAGAGTTaGCATGAAAAGCAAGCACTC | + |
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Preference number: 3 (lower is better) Translates to: FPSSYQGVLPIIPAPSSKKRPKS*HEKQAL Trigger: GAGTGCTTGCTTTTCATGCAAACTCTTTGGTCGTTT...TTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGGAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000262158.7 ENST00000591805.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGTTATGACGGACCAAATCCTTCTTGGAGGGAAGGGGACTGCTAAGCATGTCAAACGACCAAAGAGTTaGCATGAAAAGCAAGCACTC | + |
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Preference number: 3 (lower is better) Translates to: WVMTDQILLGGKGTAKHVKRPKS*HEKQAL Trigger: GAGTGCTTGCTTTTCATGCAAACTCTTTGGTCGTTT...GACATGCTTAGCAGTCCCCTTCCCTCCAAGAAGGATTTGGTCCGTCATAACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| 3UTR TCA 72 bp | GAGCTAAGAACAGTGTCGAAGTATCATACGAGTGTATaGGTTGTAGAAGAAATGAAAGAAGAGTTAGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: ELRTVSKYHTSV*VVEEMKEELGV Trigger: GACACCTAACTCTTCTTTCATTTCTTCTACAACTCATACACTCGTATGATACTTCGACACTGTTCTTAGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262158.7 |
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| CDS-3UTR CCA 90 bp | CCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAAAAACCTCCCGCGTCAGCTaGATGCCGCAGCCGATTTTG | + |
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Preference number: 4 (lower is better) Translates to: PLFLSGCPADHTCPFFQKTSRVS*MPQPIL Trigger: CAAAATCGGCTGCGGCATCCAGCTGACGCGGGAGGT...TTTTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | TTCCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAATGCCGCAGCCGATTTTaGTCCGCACCTTCTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: FPSSYQGVLPIIPAPSSKCRSRF*SAPSAP Trigger: TGGTGCAGAAGGTGCGGAGCAAAATCGGCTGCGGCA...TTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | TTCCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAACCCGTCCACGGCTGCTaGATAAACTCGTGGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: FPSSYQGVLPIIPAPSSKPVHGC*INSWSL Trigger: CAATGACCACGAGTTTATGCAGCAGCCGTGGACGGG...TTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | CCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAAAAAAGCCCGTCCACGGCTaGTGCATAAACTCGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PLFLSGCPADHTCPFFQKKPVHG*CINSWS Trigger: TGACCACGAGTTTATGCAGCAGCCGTGGACGGGCTT...TTTTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGG 54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | ACAGCCGCACACTCACACTCACACACACTCCTGACAAGTGAAATGATGACCGCCCCTATCAGGGTGTCCTaGCGATCATACCTGCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TAAHSHSHTLLTSEMMTAPIRVS*RSYLPL Trigger: AAGGGGCAGGTATGATCGGCAGGACACCCTGATAGG...GGCGGTCATCATTTCACTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CCA 90 bp | ACAGCCGCACACTCACACTCACACACACTCCTGACAAGTGAAATGATGACCGCCTGCTGCATAAACTCGTaGTCATTGGGCCGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TAAHSHSHTLLTSEMMTACCINS*SLGRCR Trigger: CCTGCAGCGGCCCAATGACCACGAGTTTATGCAGCA...GGCGGTCATCATTTCACTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR TCA 90 bp | CCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAAAACGTAGTCGAAAGCCTTaGTGGAGAAACCGGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: PLFLSGCPADHTCPFFQKRSRKP*WRNRGT Trigger: TGTTCCCCGGTTTCTCCATCAAGGCTTTCGACTACG...TTTTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | TTCCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAACCAAAACTCCAAAGGTaGGCGGCCACGACAGTATCT | + |
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Preference number: 4 (lower is better) Translates to: FPSSYQGVLPIIPAPSSKPKLQR*AATTVS Trigger: AGATACTGTCGTGGCCGCGCACCTTTGGAGTTTTGG...TTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR TCA 90 bp | ACAGCCGCACACTCACACTCACACACACTCCTGACAAGTGAAATGATGACCGCCAGCAGCAAAGTAGTTTaGAGTGTGGCCTGCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TAAHSHSHTLLTSEMMTASSKVV*SVACSA Trigger: AGCTGAGCAGGCCACACTTCAAACTACTTTGCTGCT...GGCGGTCATCATTTCACTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CCA 90 bp | ACAGCCGCACACTCACACTCACACACACTCCTGACAAGTGAAATGATGACCGCCGGAAGGCACAGCATCTaGACAGTCTGCAGTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TAAHSHSHTLLTSEMMTAGRHSI*TVCSWF Trigger: AAACCAACTGCAGACTGTCCAGATGCTGTGCCTTCC...GGCGGTCATCATTTCACTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | GAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCAACCAACACCCGCGTCAGCTGGATaGCGCAGCCGATTTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ERNKTEHKRGREEENQPTPASAG*RSRFCS Trigger: GGAGCAAAATCGGCTGCGGCATCCAGCTGACGCGGG...TGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR TCA 90 bp | CCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAAAAAGTCTGCAGTTGGTTTaGGAAAATCCATCGGGTATC | + |
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Preference number: 4 (lower is better) Translates to: PLFLSGCPADHTCPFFQKSLQLV*ENPSGI Trigger: GATACCCGATGGATTTTCTCAAACCAACTGCAGACT...TTTTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR TCA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCACCACGCACCAGTGTaGCCGATCCCCAGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLKERNKTEHKRGREEENHHAPV*PIPRLQ Trigger: CTGGAGCCTGGGGATCGGTCACACTGGTGCGTGGTG...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CCA 90 bp | GAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCAACCAACAGGCCACGACAGTATCTaGGCCACTGGTGTTCGACGT | + |
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Preference number: 4 (lower is better) Translates to: ERNKTEHKRGREEENQPTGHDSI*ATGVRR Trigger: ACGTCGAACACCAGTGGCCCAGATACTGTCGTGGCC...TGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACTGGTCATTGGGCCGCTaGAGGCTGTACGCCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: FLKERNKTEHKRGREEENWSLGR*RLYAFS Trigger: CGAGAAGGCGTACAGCCTGCAGCGGCCCAATGACCA...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | GAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCAACCAACAAGATGGGGTAACTGCTaGGGTTGTACACCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: ERNKTEHKRGREEENQPTRWGNC*GCTPTH Trigger: GTGTGTGGGTGTACAACCGCAGCAGTTACCCCATCT...TGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CCA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACGTACCAACAGCGTCCTaGAGTCCGGGTTGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FLKERNKTEHKRGREEENVPTAS*SPGCPV Trigger: CACTGGACAACCCGGACTCCAGGACGCTGTTGGTAC...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | GAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCAACCAACATTCACAAAGCTGATCTaGACGGTAAAGCCCGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ERNKTEHKRGREEENQPTFTKLI*TVKPVH Trigger: GTGGACGGGCTTTACCGTGCAGATCAGCTTTGTGAA...TGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR GCA 90 bp | GAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCAACCAACACACTGTGTTTGGTGGTaGTTGGATTTCTGCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ERNKTEHKRGREEENQPTHCVWW*LDFCFP Trigger: GGGGAAGCAGAAATCCAAGCACCACCAAACACAGTG...TGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR TCA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACTCTTGTTGTCCGAATTaGGCTGTCCGAGGCAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FLKERNKTEHKRGREEENSCCPN*AVRGKS Trigger: GCTTTTGCCTCGGACAGCTCAATTCGGACAACAAGA...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR TCA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACACCTTCTGCACCAGCTaGCTCTTGTTGTCCGAATTG | + |
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Preference number: 4 (lower is better) Translates to: FLKERNKTEHKRGREEENTFCTS*LLLSEL Trigger: CAATTCGGACAACAAGAGTCAGCTGGTGCAGAAGGT...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CCA 90 bp | GAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCAACCAACATGGACAGTCTGCAGTTaGTTTGAGAAAATCCATCGG | + |
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Preference number: 4 (lower is better) Translates to: ERNKTEHKRGREEENQPTWTVCS*FEKIHR Trigger: CCGATGGATTTTCTCAAACCAACTGCAGACTGTCCA...TGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CCA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACGTGTTTGGTGGTGCTTaGATTTCTGCTTCCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FLKERNKTEHKRGREEENVFGGA*ISASPL Trigger: AAGAGGGGAAGCAGAAATCCAAGCACCACCAAACAC...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CCA 90 bp | GAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCAACCAACATTCATACACTGTGTTTaGTGGTGCTTGGATTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ERNKTEHKRGREEENQPTFIHCV*WCLDFC Trigger: GCAGAAATCCAAGCACCACCAAACACAGTGTATGAA...TGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CCA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACATACACTGTGTTTGGTaGTGCTTGGATTTCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FLKERNKTEHKRGREEENIHCVW*CLDFCF Trigger: GAAGCAGAAATCCAAGCACCACCAAACACAGTGTAT...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS TCA 90 bp | CACGGCTCCTCCAGAGACGCCGGACGAGCGCAGATCGTTTGGTCCTaGACATGCGGGGCGAGGAGGCGAGGAGAAAAGTCGTTTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: HGSSRDAGRAQIVWS*TCGARRRGEKSFAC Trigger: GCAGGCAAACGACTTTTCTCCTCGCCTCCTCGCCCCGCATGTTCAGGACCAAACGATCTGCGCTCGTCCGGCGTCTCTGGAGGAGCCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.8 |
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| CDS GCA 90 bp | TGCGGTTGTACACCCACACACCATCCACCTCCCGCGTCAGCTGGATaGCGCAGCCGATTTTGCTCCGCACCTTCTGCACCAGCTGACTCT | + |
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Preference number: 5 (lower is better) Translates to: CGCTPTHHPPPASAG*RSRFCSAPSAPADS Trigger: AGAGTCAGCTGGTGCAGAAGGTGCGGAGCAAAATCGGCTGCGGCATCCAGCTGACGCGGGAGGTGGATGGTGTGTGGGTGTACAACCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000586093.1 ENST00000587336.1 ENST00000588190.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS GCA 90 bp | CAGCCCTTCACAAAGCTGATCTGCACGGTAAAGCCCGTCCACGGCTaGTGCATAAACTCGTGGTCATTGGGCCGCTGCAGGCTGTACGCC | + |
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Preference number: 5 (lower is better) Translates to: QPFTKLICTVKPVHG*CINSWSLGRCRLYA Trigger: GGCGTACAGCCTGCAGCGGCCCAATGACCACGAGTTTATGCAGCAGCCGTGGACGGGCTTTACCGTGCAGATCAGCTTTGTGAAGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000587336.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS GCA 90 bp | CCCTTCACAAAGCTGATCTGCACGGTAAAGCCCGTCCACGGCTGCTaGATAAACTCGTGGTCATTGGGCCGCTGCAGGCTGTACGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PFTKLICTVKPVHGC*INSWSLGRCRLYAF Trigger: GAAGGCGTACAGCCTGCAGCGGCCCAATGACCACGAGTTTATGCAGCAGCCGTGGACGGGCTTTACCGTGCAGATCAGCTTTGTGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000587336.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS TCA 90 bp | CATTGGGCCGCTGCAGGCTGTACGCCTTCTCGTAGTCGAAAGCCTTaGTGGAGAAACCGGGGAACACCTTGTGTACCAACAGCGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: HWAAAGCTPSRSRKP*WRNRGTPCVPTASW Trigger: CCAGGACGCTGTTGGTACACAAGGTGTTCCCCGGTTTCTCCATCAAGGCTTTCGACTACGAGAAGGCGTACAGCCTGCAGCGGCCCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000587336.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | TTCCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAACGCGGCTACCGGCTGTaGAAGATGACCTCTAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: FPSSYQGVLPIIPAPSSKRGYRL*KMTSSQ Trigger: CTGGCTAGAGGTCATCTTCAACAGCCGGTAGCCGCG...TTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS TCA 90 bp | AGCTGGATGCCGCAGCCGATTTTGCTCCGCACCTTCTGCACCAGCTaGCTCTTGTTGTCCGAATTGAGCTGTCCGAGGCAAAAGCCATTC | + |
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Preference number: 5 (lower is better) Translates to: SWMPQPILLRTFCTS*LLLSELSCPRQKPF Trigger: GAATGGCTTTTGCCTCGGACAGCTCAATTCGGACAACAAGAGTCAGCTGGTGCAGAAGGTGCGGAGCAAAATCGGCTGCGGCATCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000586093.1 ENST00000587336.1 ENST00000588190.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS CCA 90 bp | TTCACTGCCCATCGTAAGACAGACCACAGCACCTTGTCACCCGTCTaGGCTCCGGGCAGCCAGTTAATCATTACTCGAGTCAGGCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: FTAHRKTDHSTLSPV*APGSQLIITRVRLN Trigger: ATTGAGCCTGACTCGAGTAATGATTAACTGGCTGCCCGGAGCCCAGACGGGTGACAAGGTGCTGTGGTCTGTCTTACGATGGGCAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545051.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAAAAATAAACTCGTGGTCATaGGGCCGCTGCAGGCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: PLFLSGCPADHTCPFFQKINSWS*GRCRLY Trigger: GTACAGCCTGCAGCGGCCCAATGACCACGAGTTTAT...TTTTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | TTCCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAACTCTTGTTGTCCGAATaGAGCTGTCCGAGGCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: FPSSYQGVLPIIPAPSSKLLLSE*SCPRQK Trigger: CTTTTGCCTCGGACAGCTCAATTCGGACAACAAGAG...TTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | TTCCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAATGTGTTTGGTGGTGCTaGGATTTCTGCTTCCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: FPSSYQGVLPIIPAPSSKCVWWC*DFCFPS Trigger: AGAGGGGAAGCAGAAATCCAAGCACCACCAAACACA...TTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | ACAGCCGCACACTCACACTCACACACACTCCTGACAAGTGAAATGATGACCGCCTCCATCCAACTCTCTTaGCCCCAAAACTCCAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: TAAHSHSHTLLTSEMMTASIQLS*PQNSKG Trigger: ACCTTTGGAGTTTTGGGGCAAAGAGAGTTGGATGGA...GGCGGTCATCATTTCACTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | CCCCTCTTCCTATCAGGGTGTCCTGCCGATCATACCTGCCCCTTCTTCCAAAAACAGTCTGCAGTTGGTTaGAGAAAATCCATCGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PLFLSGCPADHTCPFFQKQSAVG*RKSIGY Trigger: ATACCCGATGGATTTTCTCAAACCAACTGCAGACTG...TTTTTGGAAGAAGGGGCAGGTATGATCGGCAGGACACCCTGATAGGAAGAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | GAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACCAACCAACAATGCCGCAGCCGATTTaGCTCCGCACCTTCTGCACC | + |
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Preference number: 5 (lower is better) Translates to: ERNKTEHKRGREEENQPTMPQPI*LRTFCT Trigger: GGTGCAGAAGGTGCGGAGCAAAATCGGCTGCGGCAT...TGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | ACAGCCGCACACTCACACTCACACACACTCCTGACAAGTGAAATGATGACCGCCCTTCATACACTGTGTTaGGTGGTGCTTGGATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: TAAHSHSHTLLTSEMMTALHTLC*VVLGFL Trigger: CAGAAATCCAAGCACCACCAAACACAGTGTATGAAG...GGCGGTCATCATTTCACTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACGTCCTGGAGTCCGGGTaGTCCAGTGTGGCGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: FLKERNKTEHKRGREEENVLESG*SSVADL Trigger: CAAGTCCGCCACACTGGACAACCCGGACTCCAGGAC...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS TCA 90 bp | CACGCTCTAAACAGCATGAAAGACAAACCACACATTCCAAAAGGCTaGCTCGCGGCCTTGATGCTGATTATTAATGGTCTGCTCAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: HALNSMKDKPHIPKG*LAALMLIINGLLRL Trigger: AAGCCTGAGCAGACCATTAATAATCAGCATCAAGGCCGCGAGTCAGCCTTTTGGAATGTGTGGTTTGTCTTTCATGCTGTTTAGAGCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545051.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACAAACCGGGGAACACCTaGTGTACCAACAGCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FLKERNKTEHKRGREEENKPGNT*CTNSVL Trigger: CAGGACGCTGTTGGTACACAAGGTGTTCCCCGGTTT...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAAGAGCGAAACAAAACAGAACACAAACGAGGACGAGAAGAAGAAAACAAACGACCAAAGAGTTaGCATGAAAAGCAAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: FLKERNKTEHKRGREEENKRPKS*HEKQAL Trigger: GAGTGCTTGCTTTTCATGCAAACTCTTTGGTCGTTT...GTTTTCTTCTTCTCGTCCTCGTTTGTGTTCTGTTTTGTTTCGCTCTTTGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS CAA 72 bp | TCACGCTCTGTCCCCTCCGCACGCGGCTACCGGCTGTaGAAGATGACCTCTAGCCAGCACGGGCAGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SRSVPSARGYRL*KMTSSQHGQLL Trigger: CAGCAGCTGCCCGTGCTGGCTAGAGGTCATCTTCAACAGCCGGTAGCCGCGTGCGGAGGGGACAGAGCGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000591805.5 |
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| CDS CAA 90 bp | CTGCTCAGCTCACGCTCTGTCCCCTCCGCACGCGGCTACCGGCTGTaGAAGATGACCTCTAGCCAGCACGGGCAGCTGCTGATGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: LLSSRSVPSARGYRL*KMTSSQHGQLLMNW Trigger: CCAGTTCATCAGCAGCTGCCCGTGCTGGCTAGAGGTCATCTTCAACAGCCGGTAGCCGCGTGCGGAGGGGACAGAGCGTGAGCTGAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000591805.5 |
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| CDS TCA 72 bp | TCCAGAGACGCCGGACGAGCGCAGATCGTTTGGTCCTaGACATGCGGGGCGAGGAGGCGAGGAGAAAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SRDAGRAQIVWS*TCGARRRGEKS Trigger: CGACTTTTCTCCTCGCCTCCTCGCCCCGCATGTTCAGGACCAAACGATCTGCGCTCGTCCGGCGTCTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.8 |
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| CDS GCA 72 bp | ACACCCACACACCATCCACCTCCCGCGTCAGCTGGATaGCGCAGCCGATTTTGCTCCGCACCTTCTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: TPTHHPPPASAG*RSRFCSAPSAP Trigger: TGGTGCAGAAGGTGCGGAGCAAAATCGGCTGCGGCATCCAGCTGACGCGGGAGGTGGATGGTGTGTGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000586093.1 ENST00000587336.1 ENST00000588190.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS CCA 72 bp | TTGTACACCCACACACCATCCACCTCCCGCGTCAGCTaGATGCCGCAGCCGATTTTGCTCCGCACCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LYTHTPSTSRVS*MPQPILLRTFC Trigger: GCAGAAGGTGCGGAGCAAAATCGGCTGCGGCATCCAGCTGACGCGGGAGGTGGATGGTGTGTGGGTGTACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000586093.1 ENST00000587336.1 ENST00000588190.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS CCA 72 bp | ACGGTAAAGCCCGTCCACGGCTGCTGCATAAACTCGTaGTCATTGGGCCGCTGCAGGCTGTACGCCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: TVKPVHGCCINS*SLGRCRLYAFS Trigger: CGAGAAGGCGTACAGCCTGCAGCGGCCCAATGACCACGAGTTTATGCAGCAGCCGTGGACGGGCTTTACCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000587336.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS GCA 72 bp | AAGCTGATCTGCACGGTAAAGCCCGTCCACGGCTGCTaGATAAACTCGTGGTCATTGGGCCGCTGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KLICTVKPVHGC*INSWSLGRCRL Trigger: CAGCCTGCAGCGGCCCAATGACCACGAGTTTATGCAGCAGCCGTGGACGGGCTTTACCGTGCAGATCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000587336.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS CAA 72 bp | GGCTTCACTGCCCATCGTAAGACAGACCACAGCACCTaGTCACCCGTCTGGGCTCCGGGCAGCCAGTTAATC | + |
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Preference number: 6 (lower is better) Translates to: GFTAHRKTDHST*SPVWAPGSQLI Trigger: GATTAACTGGCTGCCCGGAGCCCAGACGGGTGACAAGGTGCTGTGGTCTGTCTTACGATGGGCAGTGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545051.2 |
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| CDS TCA 72 bp | CGTCTTCTCCTCCCAGTATGCCACCACGCACCAGTGTaGCCGATCCCCAGGCTCCAGAAGAAGTTGGGAATC | + |
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Preference number: 6 (lower is better) Translates to: RLLLPVCHHAPV*PIPRLQKKLGI Trigger: GATTCCCAACTTCTTCTGGAGCCTGGGGATCGGTCACACTGGTGCGTGGTGGCATACTGGGAGGAGAAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000586093.1 ENST00000588190.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS GCA 72 bp | AACATGCGGGGCGAGGAGGCGAGGAGAAAAGTCGTTTaGCTGCTAAGGAGCGAACATGACCTCCGCACACCA | + |
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Preference number: 6 (lower is better) Translates to: NMRGEEARRKVV*LLRSEHDLRTP Trigger: TGGTGTGCGGAGGTCATGTTCGCTCCTTAGCAGGCAAACGACTTTTCTCCTCGCCTCCTCGCCCCGCATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262158.8 |
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| CDS GCA 72 bp | ACAAAGCTGATCTGCACGGTAAAGCCCGTCCACGGCTaGTGCATAAACTCGTGGTCATTGGGCCGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TKLICTVKPVHG*CINSWSLGRCR Trigger: CCTGCAGCGGCCCAATGACCACGAGTTTATGCAGCAGCCGTGGACGGGCTTTACCGTGCAGATCAGCTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000587336.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS GCA 72 bp | GGGAGACTCCAGTTCGGCCTTCCATCCAACTCTCTTTaGCCCAAAACTCCAAAGGTGCGCGGCCACGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRLQFGLPSNSL*PKTPKVRGHDS Trigger: ACTGTCGTGGCCGCGCACCTTTGGAGTTTTGGGGCAAAGAGAGTTGGATGGAAGGCCGAACTGGAGTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS CAA 90 bp | GTCTGCTCAGGCTTCACTGCCCATCGTAAGACAGACCACAGCACCTaGTCACCCGTCTGGGCTCCGGGCAGCCAGTTAATCATTACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: VCSGFTAHRKTDHST*SPVWAPGSQLIITR Trigger: TCGAGTAATGATTAACTGGCTGCCCGGAGCCCAGACGGGTGACAAGGTGCTGTGGTCTGTCTTACGATGGGCAGTGAAGCCTGAGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545051.2 |
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| CDS TCA 72 bp | CCGCAGCCGATTTTGCTCCGCACCTTCTGCACCAGCTaGCTCTTGTTGTCCGAATTGAGCTGTCCGAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PQPILLRTFCTS*LLLSELSCPRQ Trigger: TTGCCTCGGACAGCTCAATTCGGACAACAAGAGTCAGCTGGTGCAGAAGGTGCGGAGCAAAATCGGCTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000586093.1 ENST00000587336.1 ENST00000588190.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS CCA 72 bp | CATCGTAAGACAGACCACAGCACCTTGTCACCCGTCTaGGCTCCGGGCAGCCAGTTAATCATTACTCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HRKTDHSTLSPV*APGSQLIITRV Trigger: GACTCGAGTAATGATTAACTGGCTGCCCGGAGCCCAGACGGGTGACAAGGTGCTGTGGTCTGTCTTACGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545051.2 |
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| CDS TCA 72 bp | GCACCTTCTGCACCAGCTGACTCTTGTTGTCCGAATTaGGCTGTCCGAGGCAAAAGCCATTCCCCTGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: APSAPADSCCPN*AVRGKSHSPEV Trigger: TACCTCAGGGGAATGGCTTTTGCCTCGGACAGCTCAATTCGGACAACAAGAGTCAGCTGGTGCAGAAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000586093.1 ENST00000587336.1 ENST00000588190.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS TCA 72 bp | GCTGCAGGCTGTACGCCTTCTCGTAGTCGAAAGCCTTaGTGGAGAAACCGGGGAACACCTTGTGTACCAACA | + |
|
Preference number: 6 (lower is better) Translates to: AAGCTPSRSRKP*WRNRGTPCVPT Trigger: TGTTGGTACACAAGGTGTTCCCCGGTTTCTCCATCAAGGCTTTCGACTACGAGAAGGCGTACAGCCTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000262158.8 ENST00000545051.2 ENST00000585986.1 ENST00000587336.1 ENST00000589634.1 ENST00000591805.5 |
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| CDS CCA 72 bp | CCCAAAACTCCAAAGGTGCGCGGCCACGACAGTATCTaGGCCACTGGTGTTCGACGTGATTCTCCGTATTTA | + |
|
Preference number: 6 (lower is better) Translates to: PKTPKVRGHDSI*ATGVRRDSPYL Trigger: TAAATACGGAGAATCACGTCGAACACCAGTGGCCCAGATACTGTCGTGGCCGCGCACCTTTGGAGTTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591805.5 |
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| CDS TCA 72 bp | GGCACAGCATCTGGACAGTCTGACATTCCAAAAGGCTaGCTCGCGGCCTTGATGCTGATTATTAATGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTASGQSDIPKG*LAALMLIINGL Trigger: CAGACCATTAATAATCAGCATCAAGGCCGCGAGTCAGCCTTTTGGAATGTCAGACTGTCCAGATGCTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585986.1 |
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| CDS TCA 72 bp | AACAGCATGAAAGACAAACCACACATTCCAAAAGGCTaGCTCGCGGCCTTGATGCTGATTATTAATGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NSMKDKPHIPKG*LAALMLIINGL Trigger: CAGACCATTAATAATCAGCATCAAGGCCGCGAGTCAGCCTTTTGGAATGTGTGGTTTGTCTTTCATGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545051.2 |
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