Pregenerated sensors for SLURP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000283992Ensembl transcript IDs: ENST00000317543.12, ENST00000521396.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTAGGACAAGCGGTGCTGGACGGTGGCTGCAGAGGCCGGGAGAGGTaGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCTGGCGC | + |
Preference number: 1 (lower is better) Translates to: LGQAVLDGGCRGRER*AGQSRGRGSCEPWR Trigger: GCGCCAGGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCTTGTCCTAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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3UTR GCA 90 bp | ACTCCACGCAGGACTTCCCTAGGACAAGCGGTGCTGGACGGTGGCTaGAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGC | + |
Preference number: 1 (lower is better) Translates to: TPRRTSLGQAVLDGG*RGRERWAGQSRGRG Trigger: GCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCTTGTCCTAGGGAAGTCCTGCGTGGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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3UTR CCA 90 bp | CAAGACTCCACGCAGGACTTCCCTAGGACAAGCGGTGCTGGACGGTaGCTGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAG | + |
Preference number: 1 (lower is better) Translates to: QDSTQDFPRTSGAGR*LQRPGEVGWPVSRE Trigger: CTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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3UTR TCA 90 bp | AGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGCAGATTaGGGCAAGACTCCACGCAGGACTTCCCTAGGACAAGCGGTGCTG | + |
Preference number: 1 (lower is better) Translates to: RGGRHDGPQAWTAAD*GKTPRRTSLGQAVL Trigger: CAGCACCGCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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3UTR CAA 90 bp | GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTaGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCCT | + |
Preference number: 2 (lower is better) Translates to: GGRDLKGRQARWAPG*DGSRLRQDSTQDFP Trigger: AGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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3UTR-3UTR CAA 90 bp | TGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGGTTGGACGGCAGCAGATaGAGGCAAGACTCCACGCAG | + |
Preference number: 3 (lower is better) Translates to: CTTRSNHILLWGGRDLKGLDGSR*RQDSTQ Trigger: CTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA...CCCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | GGGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCCGGGAGAGGTGGGCTaGCCAGTCTCGAGGGAGGGG | + |
Preference number: 4 (lower is better) Translates to: GRSGPEGAAGTMGPRLGRPGEVG*PVSREG Trigger: CCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGG...CCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR TCA 90 bp | AGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCGGGGAGGTCGGGACCTaGAGGGGCGGCAGGCACGAT | + |
Preference number: 4 (lower is better) Translates to: RGRERWAGQSRGRGSCEPGEVGT*RGGRHD Trigger: ATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCCC...GGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGCGGTGCTGGACGGTaGCTGCAGAGGCCGGGAGAG | + |
Preference number: 4 (lower is better) Translates to: GGRDLKGRQARWAPGLDGSGAGR*LQRPGE Trigger: CTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCT...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | AGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCGGCCCAGGCCCAGGCTaGGGATATCGGGGCAGCCTA | + |
Preference number: 4 (lower is better) Translates to: RGRERWAGQSRGRGSCEPGPGPG*GYRGSL Trigger: TAGGCTGCCCCGATATCCCCAGCCTGGGCCTGGGCC...GGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | AGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCAGAGGCCGGGAGAGGTaGGCTGGCCAGTCTCGAGGG | + |
Preference number: 4 (lower is better) Translates to: RGRERWAGQSRGRGSCEPRGRER*AGQSRG Trigger: CCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT...GGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | AGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGAGAGGCCGGGAGAGGTaGGCTGGCCAGTCTCGAGGG | + |
Preference number: 4 (lower is better) Translates to: RSGPEGAAGTMGPRLGRQRGRER*AGQSRG Trigger: CCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT...CTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | AGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGAGCGGTGCTGGACGGTaGCTGCAGAGGCCGGGAGAG | + |
Preference number: 4 (lower is better) Translates to: RSGPEGAAGTMGPRLGRQSGAGR*LQRPGE Trigger: CTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCT...CTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR TCA 90 bp | GGGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGAATCCTCGGTGTTGCTaGGGACCCGGGTGGCAGTGG | + |
Preference number: 4 (lower is better) Translates to: GRSGPEGAAGTMGPRLGRNPRCC*GPGWQW Trigger: CCACTGCCACCCGGGTCCTCAGCAACACCGAGGATT...CCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR TCA 90 bp | GGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCTGGTGGACGGCAGCAGATTaGGGCAAGACTCCACGCAGG | + |
Preference number: 4 (lower is better) Translates to: GRERWAGQSRGRGSCEPWWTAAD*GKTPRR Trigger: CCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCA...CCAGGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR TCA 90 bp | GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCTGGACGGCAGCAGATTaGGGCAAGACTCCACGCAGG | + |
Preference number: 4 (lower is better) Translates to: GGRDLKGRQARWAPGLDGWTAAD*GKTPRR Trigger: CCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCA...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR GCA 90 bp | GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCGCCGTCAGTCATGGTTaGAGAGGCTGGTCTGGCAGC | + |
Preference number: 4 (lower is better) Translates to: GGRDLKGRQARWAPGLDGAVSHG*RGWSGS Trigger: GCTGCCAGACCAGCCTCTGCAACCATGACTGACGGC...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR GCA 90 bp | GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCACCCTCCGAAGCCCGTaGACTGGTGACACCATATGG | + |
Preference number: 4 (lower is better) Translates to: GGRDLKGRQARWAPGLDGTLRSP*TGDTIW Trigger: CCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGT...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGAGGGCGGCAGGCACGATaGGCCCCAGGCTTGGACGGC | + |
Preference number: 4 (lower is better) Translates to: TMGPRLGRQQIEARLHAGGRQAR*APGLDG Trigger: GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCC...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR TCA 90 bp | CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCCCGGGTGGCAGTGGTaGCACAGTGGGTGGAGTCCC | + |
Preference number: 4 (lower is better) Translates to: RWAPGLDGSRLRQDSTQDPGWQW*HSGWSP Trigger: GGGACTCCACCCACTGTGTCACCACTGCCACCCGGG...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR TCA 90 bp | ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGAGGGGAGGTCGGGACCTaGAGGGGCGGCAGGCACGAT | + |
Preference number: 4 (lower is better) Translates to: TMGPRLGRQQIEARLHAGGEVGT*RGGRHD Trigger: ATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCCC...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR TCA 90 bp | CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACGGCGGGTGGCAGTGGTaGCACAGTGGGTGGAGTCCC | + |
Preference number: 4 (lower is better) Translates to: RWAPGLDGSRLRQDSTQDGGWQW*HSGWSP Trigger: GGGACTCCACCCACTGTGTCACCACTGCCACCCGCC...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521396.1 |
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CDS-3UTR GCA 90 bp | TGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCAGCAGGAGCCCAGTaGCGAGCTGCATGTTCTCCT | + |
Preference number: 4 (lower is better) Translates to: CRGRERWAGQSRGRGSCEPAGAQ*RAACSP Trigger: AGGAGAACATGCAGCTCGGCACTGGGCTCCTGCTGG...CTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | GGGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGTCGGGGCAGCCTATGTaGCACATCTTGGTGACCAGA | + |
Preference number: 4 (lower is better) Translates to: GRSGPEGAAGTMGPRLGRSGQPM*HILVTR Trigger: TCTGGTCACCAAGATGTGCCACATAGGCTGCCCCGA...CCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | GGGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGTTGCAGAGGCTGGTCTaGCAGCAAGCGATGGATACG | + |
Preference number: 4 (lower is better) Translates to: GRSGPEGAAGTMGPRLGRLQRLV*QQAMDT Trigger: CGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAA...CCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCGGGAGAGGTGGGCTaGCCAGTCTCGAGGGAGGGG | + |
Preference number: 4 (lower is better) Translates to: TMGPRLGRQQIEARLHAGPGEVG*PVSREG Trigger: CCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGG...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | TGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGAGTCCCTCAGGCATCTaGATCCATGGGAGCACCCTC | + |
Preference number: 4 (lower is better) Translates to: CRGRERWAGQSRGRGSCESPSGI*IHGSTL Trigger: GAGGGTGCTCCCATGGATCCAGATGCCTGAGGGACT...CTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | GGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCCTAGGACAAGCGGTGCTGGGCGGCAGGCACGATaGGCCCCAGGCTTGGACGGC | + |
Preference number: 4 (lower is better) Translates to: GSRLRQDSTQDFPRTSGAGRQAR*APGLDG Trigger: GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCC...AGCACCGCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | TGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGACTGGTGACACCATATaGCTTCGGCTGCAGCCAGCT | + |
Preference number: 4 (lower is better) Translates to: CRGRERWAGQSRGRGSCETGDTI*LRLQPA Trigger: AGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGT...CTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR GCA 90 bp | CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCCATATGGCTTCGGCTaGAGCCAGCTGCAGGCTCAG | + |
Preference number: 4 (lower is better) Translates to: RWAPGLDGSRLRQDSTQDPYGFG*SQLQAQ Trigger: CTGAGCCTGCAGCTGGCTGCAGCCGAAGCCATATGG...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR TCA 90 bp | CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACAAGCCCGTGCACTGGTaGCACCATATGGCTTCGGCT | + |
Preference number: 4 (lower is better) Translates to: RWAPGLDGSRLRQDSTQDKPVHW*HHMASA Trigger: AGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTT...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR GCA 90 bp | ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCATATGGCTTCGGCTaGAGCCAGCTGCAGGCTCAG | + |
Preference number: 4 (lower is better) Translates to: TMGPRLGRQQIEARLHAGPYGFG*SQLQAQ Trigger: CTGAGCCTGCAGCTGGCTGCAGCCGAAGCCATATGG...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGAAGGCATCTGGATCCATaGGAGCACCCTCCGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: TMGPRLGRQQIEARLHAGRHLDP*EHPPKP Trigger: GGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCCT...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR TCA 90 bp | TGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCAAGCCCGTGCACTGGTaGCACCATATGGCTTCGGCT | + |
Preference number: 4 (lower is better) Translates to: WAPGLDGSRLRQDSTQDFKPVHW*HHMASA Trigger: AGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTT...GAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR TCA 90 bp | CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTGTGGCACATCTTGGTaGCCAGAGGCAAATCCTCGG | + |
Preference number: 4 (lower is better) Translates to: RWAPGLDGSRLRQDSTQDCGTSW*PEANPR Trigger: CCGAGGATTTGCCTCTGGTCACCAAGATGTGCCACA...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR GCA 90 bp | ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGAACCCTCCGAAGCCCGTaGACTGGTGACACCATATGG | + |
Preference number: 4 (lower is better) Translates to: TMGPRLGRQQIEARLHAGTLRSP*TGDTIW Trigger: CCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGT...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACACTGGTGACACCATATaGCTTCGGCTGCAGCCAGCT | + |
Preference number: 4 (lower is better) Translates to: RWAPGLDGSRLRQDSTQDTGDTI*LRLQPA Trigger: AGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGT...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | ATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTAGGCATCTGGATCCATaGGAGCACCCTCCGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: MGPRLGRQQIEARLHAGLRHLDP*EHPPKP Trigger: GGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCCT...AAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | AGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGAATCACATTTTATTGTaGGGAGGTCGGGACCTGAAG | + |
Preference number: 4 (lower is better) Translates to: RSGPEGAAGTMGPRLGRQNHILL*GGRDLK Trigger: CTTCAGGTCCCGACCTCCCCACAATAAAATGTGATT...CTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | TTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCCTAGGACAAGCTCTGGCAGCAAGCGATaGATACGTAGGGGCCCAGGC | + |
Preference number: 4 (lower is better) Translates to: LDGSRLRQDSTQDFPRTSSGSKR*IRRGPG Trigger: GCCTGGGCCCCTACGTATCCATCGCTTGCTGCCAGA...GCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | TTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCCTAGGACAAGCGGCAGCCGTCAGTCATaGTTGCAGAGGCTGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: LDGSRLRQDSTQDFPRTSGSRQS*LQRLVW Trigger: CCAGACCAGCCTCTGCAACCATGACTGACGGCTGCC...GCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | TTGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGGAGCGTCCGGGGGCCTaGAGGAGGGCAGCCGTCAGT | + |
Preference number: 4 (lower is better) Translates to: LYHTIQSHFIVGRSGPEGERPGA*RRAAVS Trigger: ACTGACGGCTGCCCTCCTCCAGGCCCCCGGACGCTC...CCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CCA 90 bp | ATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTAATCACATTTTATTGTaGGGAGGTCGGGACCTGAAG | + |
Preference number: 4 (lower is better) Translates to: MGPRLGRQQIEARLHAGLNHILL*GGRDLK Trigger: CTTCAGGTCCCGACCTCCCCACAATAAAATGTGATT...AAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CCA 90 bp | TTGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGCATGGTTGCAGAGGCTaGTCTGGCAGCAAGCGATGG | + |
Preference number: 4 (lower is better) Translates to: LYHTIQSHFIVGRSGPEGHGCRG*SGSKRW Trigger: CCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATG...CCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS CCA 90 bp | CCGGGGGCCTGGAGGAGGGCAGCCGTCAGTCATGGTTGCAGAGGCTaGTCTGGCAGCAAGCGATGGATACGTAGGGGCCCAGGCCCAGGC | + |
Preference number: 5 (lower is better) Translates to: PGAWRRAAVSHGCRG*SGSKRWIRRGPGPG Trigger: GCCTGGGCCTGGGCCCCTACGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCAGGCCCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CAA 90 bp | GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCTTGGACGGCAGCAGATaGAGGCAAGACTCCACGCAG | + |
Preference number: 5 (lower is better) Translates to: GGRDLKGRQARWAPGLDGLDGSR*RQDSTQ Trigger: CTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CAA 90 bp | TGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGAGCCGTCAGTCATGGTaGCAGAGGCTGGTCTGGCAG | + |
Preference number: 5 (lower is better) Translates to: CRGRERWAGQSRGRGSCESRQSW*QRLVWQ Trigger: CTGCCAGACCAGCCTCTGCAACCATGACTGACGGCT...CTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CAA 90 bp | TGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCGATGGGCCCCAGGCTaGGACGGCAGCAGATTGAGG | + |
Preference number: 5 (lower is better) Translates to: WAPGLDGSRLRQDSTQDFRWAPG*DGSRLR Trigger: CCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG...GAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS TCA 90 bp | AGGCATCTGGATCCATGGGAGCACCCTCCGAAGCCCGTGCACTGGTaGCACCATATGGCTTCGGCTGCAGCCAGCTGCAGGCTCAGGACG | + |
Preference number: 5 (lower is better) Translates to: RHLDPWEHPPKPVHW*HHMASAAASCRLRT Trigger: CGTCCTGAGCCTGCAGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS GCA 90 bp | AGTCCCTCAGGCATCTGGATCCATGGGAGCACCCTCCGAAGCCCGTaGACTGGTGACACCATATGGCTTCGGCTGCAGCCAGCTGCAGGC | + |
Preference number: 5 (lower is better) Translates to: SPSGIWIHGSTLRSP*TGDTIWLRLQPAAG Trigger: GCCTGCAGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCCTGAGGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CAA 90 bp | AGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGTCCAATCACATTTTATaGTGGGGAGGTCGGGACCTG | + |
Preference number: 5 (lower is better) Translates to: RSGPEGAAGTMGPRLGRQSNHIL*WGGRDL Trigger: CAGGTCCCGACCTCCCCACAATAAAATGTGATTGGA...CTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CAA 90 bp | TGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCTTGGACGGCAGCAGATaGAGGCAAGACTCCACGCAG | + |
Preference number: 5 (lower is better) Translates to: WAPGLDGSRLRQDSTQDFLDGSR*RQDSTQ Trigger: CTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA...GAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CAA 90 bp | CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCCTATGTGGCACATCTaGGTGACCAGAGGCAAATCC | + |
Preference number: 5 (lower is better) Translates to: RWAPGLDGSRLRQDSTQDPMWHI*VTRGKS Trigger: GGATTTGCCTCTGGTCACCAAGATGTGCCACATAGG...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CAA 90 bp | TGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCTCCAATCACATTTTATaGTGGGGAGGTCGGGACCTG | + |
Preference number: 5 (lower is better) Translates to: WAPGLDGSRLRQDSTQDFSNHIL*WGGRDL Trigger: CAGGTCCCGACCTCCCCACAATAAAATGTGATTGGA...GAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS-3UTR CAA 90 bp | TTGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGCGATGGGCCCCAGGCTaGGACGGCAGCAGATTGAGG | + |
Preference number: 5 (lower is better) Translates to: LYHTIQSHFIVGRSGPEGRWAPG*DGSRLR Trigger: CCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG...CCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS-3UTR CAA 90 bp | TTGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGGGCAAATCCTCGGTGTaGCTGAGGACCCGGGTGGCA | + |
Preference number: 5 (lower is better) Translates to: LYHTIQSHFIVGRSGPEGGKSSV*LRTRVA Trigger: TGCCACCCGGGTCCTCAGCAACACCGAGGATTTGCC...CCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS CCA 72 bp | GCGTCCGGGGGCCTGGAGGAGGGCAGCCGTCAGTCATaGTTGCAGAGGCTGGTCTGGCAGCAAGCGATGGAT | + |
Preference number: 6 (lower is better) Translates to: ASGGLEEGSRQS*LQRLVWQQAMD Trigger: ATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCAGGCCCCCGGACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS GCA 72 bp | CCGGGGGCCTGGAGGAGGGCAGCCGTCAGTCATGGTTaGAGAGGCTGGTCTGGCAGCAAGCGATGGATACGT | + |
Preference number: 6 (lower is better) Translates to: PGAWRRAAVSHG*RGWSGSKRWIR Trigger: ACGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCAGGCCCCCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS CCA 72 bp | AGCACCCTCCGAAGCCCGTGCACTGGTGACACCATATaGCTTCGGCTGCAGCCAGCTGCAGGCTCAGGACGG | + |
Preference number: 6 (lower is better) Translates to: STLRSPCTGDTI*LRLQPAAGSGR Trigger: CCGTCCTGAGCCTGCAGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS CAA 72 bp | TCCGGGGGCCTGGAGGAGGGCAGCCGTCAGTCATGGTaGCAGAGGCTGGTCTGGCAGCAAGCGATGGATACG | + |
Preference number: 6 (lower is better) Translates to: SGGLEEGSRQSW*QRLVWQQAMDT Trigger: CGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCAGGCCCCCGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS TCA 72 bp | GATCCATGGGAGCACCCTCCGAAGCCCGTGCACTGGTaGCACCATATGGCTTCGGCTGCAGCCAGCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: DPWEHPPKPVHW*HHMASAAASCR Trigger: CCTGCAGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCTCCCATGGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS CAA 90 bp | CCCAGGCCCAGGCTGGGGATATCGGGGCAGCCTATGTGGCACATCTaGGTGACCAGAGGCAAATCCTCGGTGTTGCTGAGGACCCGGGTG | + |
Preference number: 6 (lower is better) Translates to: PRPRLGISGQPMWHI*VTRGKSSVLLRTRV Trigger: CACCCGGGTCCTCAGCAACACCGAGGATTTGCCTCTGGTCACCAAGATGTGCCACATAGGCTGCCCCGATATCCCCAGCCTGGGCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS GCA 72 bp | GGCATCTGGATCCATGGGAGCACCCTCCGAAGCCCGTaGACTGGTGACACCATATGGCTTCGGCTGCAGCCA | + |
Preference number: 6 (lower is better) Translates to: GIWIHGSTLRSP*TGDTIWLRLQP Trigger: TGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317543.12 ENST00000521396.1 |
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CDS CCA 72 bp | CCCAGGCCCAGGCTGGGGATATCGGGGCAGCCTATGTaGCACATCTTGGTGACCAGAGGCAAATCCTCGGTG | + |
Preference number: 6 (lower is better) Translates to: PRPRLGISGQPM*HILVTRGKSSV Trigger: CACCGAGGATTTGCCTCTGGTCACCAAGATGTGCCACATAGGCTGCCCCGATATCCCCAGCCTGGGCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS CCA 72 bp | TGGAGGAGGGCAGCCGTCAGTCATGGTTGCAGAGGCTaGTCTGGCAGCAAGCGATGGATACGTAGGGGCCCA | + |
Preference number: 6 (lower is better) Translates to: WRRAAVSHGCRG*SGSKRWIRRGP Trigger: TGGGCCCCTACGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS CCA 72 bp | AGTCATGGTTGCAGAGGCTGGTCTGGCAGCAAGCGATaGATACGTAGGGGCCCAGGCCCAGGCTGGGGATAT | + |
Preference number: 6 (lower is better) Translates to: SHGCRGWSGSKR*IRRGPGPGWGY Trigger: ATATCCCCAGCCTGGGCCTGGGCCCCTACGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS CAA 72 bp | TGGCACATCTTGGTGACCAGAGGCAAATCCTCGGTGTaGCTGAGGACCCGGGTGGCAGTGGTGACACAGTGG | + |
Preference number: 6 (lower is better) Translates to: WHILVTRGKSSV*LRTRVAVVTQW Trigger: CCACTGTGTCACCACTGCCACCCGGGTCCTCAGCAACACCGAGGATTTGCCTCTGGTCACCAAGATGTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317543.12 |
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CDS CAA 72 bp | AGGCTGGGGATATCGGGGCAGCCTATGTGGCACATCTaGGTGACCAGAGGCAAATCCTCGGTGTTGCTGAGG | + |
Preference number: 6 (lower is better) Translates to: RLGISGQPMWHI*VTRGKSSVLLR Trigger: CCTCAGCAACACCGAGGATTTGCCTCTGGTCACCAAGATGTGCCACATAGGCTGCCCCGATATCCCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317543.12 |