RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLURP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000283992

Ensembl transcript IDs: ENST00000317543.12, ENST00000521396.1

Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGGACAAGCGGTGCTGGACGGTGGCTGCAGAGGCCGGGAGAGGTaGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCTGGCGC +
Preference number: 1 (lower is better)
Translates to: LGQAVLDGGCRGRER*AGQSRGRGSCEPWR
Trigger: GCGCCAGGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCTTGTCCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
3UTR GCA 90 bp ACTCCACGCAGGACTTCCCTAGGACAAGCGGTGCTGGACGGTGGCTaGAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGC +
Preference number: 1 (lower is better)
Translates to: TPRRTSLGQAVLDGG*RGRERWAGQSRGRG
Trigger: GCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCTTGTCCTAGGGAAGTCCTGCGTGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
3UTR CCA 90 bp CAAGACTCCACGCAGGACTTCCCTAGGACAAGCGGTGCTGGACGGTaGCTGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAG +
Preference number: 1 (lower is better)
Translates to: QDSTQDFPRTSGAGR*LQRPGEVGWPVSRE
Trigger: CTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317543.12
3UTR TCA 90 bp AGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGCAGATTaGGGCAAGACTCCACGCAGGACTTCCCTAGGACAAGCGGTGCTG +
Preference number: 1 (lower is better)
Translates to: RGGRHDGPQAWTAAD*GKTPRRTSLGQAVL
Trigger: CAGCACCGCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
3UTR CAA 90 bp GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTaGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCCT +
Preference number: 2 (lower is better)
Translates to: GGRDLKGRQARWAPG*DGSRLRQDSTQDFP
Trigger: AGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
3UTR-3UTR CAA 90 bp TGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGGTTGGACGGCAGCAGATaGAGGCAAGACTCCACGCAG +
Preference number: 3 (lower is better)
Translates to: CTTRSNHILLWGGRDLKGLDGSR*RQDSTQ
Trigger: CTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA...CCCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp GGGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCCGGGAGAGGTGGGCTaGCCAGTCTCGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRSGPEGAAGTMGPRLGRPGEVG*PVSREG
Trigger: CCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGG...CCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR TCA 90 bp AGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCGGGGAGGTCGGGACCTaGAGGGGCGGCAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: RGRERWAGQSRGRGSCEPGEVGT*RGGRHD
Trigger: ATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCCC...GGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGCGGTGCTGGACGGTaGCTGCAGAGGCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GGRDLKGRQARWAPGLDGSGAGR*LQRPGE
Trigger: CTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCT...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp AGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCGGCCCAGGCCCAGGCTaGGGATATCGGGGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: RGRERWAGQSRGRGSCEPGPGPG*GYRGSL
Trigger: TAGGCTGCCCCGATATCCCCAGCCTGGGCCTGGGCC...GGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp AGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCAGAGGCCGGGAGAGGTaGGCTGGCCAGTCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: RGRERWAGQSRGRGSCEPRGRER*AGQSRG
Trigger: CCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT...GGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp AGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGAGAGGCCGGGAGAGGTaGGCTGGCCAGTCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: RSGPEGAAGTMGPRLGRQRGRER*AGQSRG
Trigger: CCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCT...CTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp AGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGAGCGGTGCTGGACGGTaGCTGCAGAGGCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RSGPEGAAGTMGPRLGRQSGAGR*LQRPGE
Trigger: CTCTCCCGGCCTCTGCAGCCACCGTCCAGCACCGCT...CTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR TCA 90 bp GGGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGAATCCTCGGTGTTGCTaGGGACCCGGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GRSGPEGAAGTMGPRLGRNPRCC*GPGWQW
Trigger: CCACTGCCACCCGGGTCCTCAGCAACACCGAGGATT...CCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR TCA 90 bp GGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCCTGGTGGACGGCAGCAGATTaGGGCAAGACTCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: GRERWAGQSRGRGSCEPWWTAAD*GKTPRR
Trigger: CCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCA...CCAGGGCTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR TCA 90 bp GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCTGGACGGCAGCAGATTaGGGCAAGACTCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: GGRDLKGRQARWAPGLDGWTAAD*GKTPRR
Trigger: CCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCA...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR GCA 90 bp GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCGCCGTCAGTCATGGTTaGAGAGGCTGGTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGRDLKGRQARWAPGLDGAVSHG*RGWSGS
Trigger: GCTGCCAGACCAGCCTCTGCAACCATGACTGACGGC...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR GCA 90 bp GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCACCCTCCGAAGCCCGTaGACTGGTGACACCATATGG +
Preference number: 4 (lower is better)
Translates to: GGRDLKGRQARWAPGLDGTLRSP*TGDTIW
Trigger: CCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGT...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGAGGGCGGCAGGCACGATaGGCCCCAGGCTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: TMGPRLGRQQIEARLHAGGRQAR*APGLDG
Trigger: GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCC...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR TCA 90 bp CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCCCGGGTGGCAGTGGTaGCACAGTGGGTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RWAPGLDGSRLRQDSTQDPGWQW*HSGWSP
Trigger: GGGACTCCACCCACTGTGTCACCACTGCCACCCGGG...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR TCA 90 bp ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGAGGGGAGGTCGGGACCTaGAGGGGCGGCAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: TMGPRLGRQQIEARLHAGGEVGT*RGGRHD
Trigger: ATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCCC...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR TCA 90 bp CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACGGCGGGTGGCAGTGGTaGCACAGTGGGTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RWAPGLDGSRLRQDSTQDGGWQW*HSGWSP
Trigger: GGGACTCCACCCACTGTGTCACCACTGCCACCCGCC...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521396.1
CDS-3UTR GCA 90 bp TGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGCCAGCAGGAGCCCAGTaGCGAGCTGCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CRGRERWAGQSRGRGSCEPAGAQ*RAACSP
Trigger: AGGAGAACATGCAGCTCGGCACTGGGCTCCTGCTGG...CTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp GGGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGTCGGGGCAGCCTATGTaGCACATCTTGGTGACCAGA +
Preference number: 4 (lower is better)
Translates to: GRSGPEGAAGTMGPRLGRSGQPM*HILVTR
Trigger: TCTGGTCACCAAGATGTGCCACATAGGCTGCCCCGA...CCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp GGGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGTTGCAGAGGCTGGTCTaGCAGCAAGCGATGGATACG +
Preference number: 4 (lower is better)
Translates to: GRSGPEGAAGTMGPRLGRLQRLV*QQAMDT
Trigger: CGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAA...CCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCGGGAGAGGTGGGCTaGCCAGTCTCGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TMGPRLGRQQIEARLHAGPGEVG*PVSREG
Trigger: CCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGG...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp TGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGAGTCCCTCAGGCATCTaGATCCATGGGAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: CRGRERWAGQSRGRGSCESPSGI*IHGSTL
Trigger: GAGGGTGCTCCCATGGATCCAGATGCCTGAGGGACT...CTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp GGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCCTAGGACAAGCGGTGCTGGGCGGCAGGCACGATaGGCCCCAGGCTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: GSRLRQDSTQDFPRTSGAGRQAR*APGLDG
Trigger: GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCC...AGCACCGCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp TGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGACTGGTGACACCATATaGCTTCGGCTGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CRGRERWAGQSRGRGSCETGDTI*LRLQPA
Trigger: AGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGT...CTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR GCA 90 bp CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCCATATGGCTTCGGCTaGAGCCAGCTGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RWAPGLDGSRLRQDSTQDPYGFG*SQLQAQ
Trigger: CTGAGCCTGCAGCTGGCTGCAGCCGAAGCCATATGG...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR TCA 90 bp CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACAAGCCCGTGCACTGGTaGCACCATATGGCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: RWAPGLDGSRLRQDSTQDKPVHW*HHMASA
Trigger: AGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTT...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR GCA 90 bp ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCATATGGCTTCGGCTaGAGCCAGCTGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TMGPRLGRQQIEARLHAGPYGFG*SQLQAQ
Trigger: CTGAGCCTGCAGCTGGCTGCAGCCGAAGCCATATGG...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGAAGGCATCTGGATCCATaGGAGCACCCTCCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TMGPRLGRQQIEARLHAGRHLDP*EHPPKP
Trigger: GGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCCT...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR TCA 90 bp TGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCAAGCCCGTGCACTGGTaGCACCATATGGCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: WAPGLDGSRLRQDSTQDFKPVHW*HHMASA
Trigger: AGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTT...GAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR TCA 90 bp CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTGTGGCACATCTTGGTaGCCAGAGGCAAATCCTCGG +
Preference number: 4 (lower is better)
Translates to: RWAPGLDGSRLRQDSTQDCGTSW*PEANPR
Trigger: CCGAGGATTTGCCTCTGGTCACCAAGATGTGCCACA...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR GCA 90 bp ACGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGAACCCTCCGAAGCCCGTaGACTGGTGACACCATATGG +
Preference number: 4 (lower is better)
Translates to: TMGPRLGRQQIEARLHAGTLRSP*TGDTIW
Trigger: CCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGT...TCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACACTGGTGACACCATATaGCTTCGGCTGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RWAPGLDGSRLRQDSTQDTGDTI*LRLQPA
Trigger: AGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGT...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp ATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTAGGCATCTGGATCCATaGGAGCACCCTCCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: MGPRLGRQQIEARLHAGLRHLDP*EHPPKP
Trigger: GGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCCT...AAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp AGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGAATCACATTTTATTGTaGGGAGGTCGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: RSGPEGAAGTMGPRLGRQNHILL*GGRDLK
Trigger: CTTCAGGTCCCGACCTCCCCACAATAAAATGTGATT...CTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp TTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCCTAGGACAAGCTCTGGCAGCAAGCGATaGATACGTAGGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LDGSRLRQDSTQDFPRTSSGSKR*IRRGPG
Trigger: GCCTGGGCCCCTACGTATCCATCGCTTGCTGCCAGA...GCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp TTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCCTAGGACAAGCGGCAGCCGTCAGTCATaGTTGCAGAGGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LDGSRLRQDSTQDFPRTSGSRQS*LQRLVW
Trigger: CCAGACCAGCCTCTGCAACCATGACTGACGGCTGCC...GCTTGTCCTAGGGAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp TTGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGGAGCGTCCGGGGGCCTaGAGGAGGGCAGCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: LYHTIQSHFIVGRSGPEGERPGA*RRAAVS
Trigger: ACTGACGGCTGCCCTCCTCCAGGCCCCCGGACGCTC...CCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CCA 90 bp ATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTAATCACATTTTATTGTaGGGAGGTCGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: MGPRLGRQQIEARLHAGLNHILL*GGRDLK
Trigger: CTTCAGGTCCCGACCTCCCCACAATAAAATGTGATT...AAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CCA 90 bp TTGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGCATGGTTGCAGAGGCTaGTCTGGCAGCAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: LYHTIQSHFIVGRSGPEGHGCRG*SGSKRW
Trigger: CCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATG...CCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS CCA 90 bp CCGGGGGCCTGGAGGAGGGCAGCCGTCAGTCATGGTTGCAGAGGCTaGTCTGGCAGCAAGCGATGGATACGTAGGGGCCCAGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PGAWRRAAVSHGCRG*SGSKRWIRRGPGPG
Trigger: GCCTGGGCCTGGGCCCCTACGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCAGGCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CAA 90 bp GGAGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCTTGGACGGCAGCAGATaGAGGCAAGACTCCACGCAG +
Preference number: 5 (lower is better)
Translates to: GGRDLKGRQARWAPGLDGLDGSR*RQDSTQ
Trigger: CTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA...GCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CAA 90 bp TGCAGAGGCCGGGAGAGGTGGGCTGGCCAGTCTCGAGGGAGGGGCAGCTGTGAGAGCCGTCAGTCATGGTaGCAGAGGCTGGTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: CRGRERWAGQSRGRGSCESRQSW*QRLVWQ
Trigger: CTGCCAGACCAGCCTCTGCAACCATGACTGACGGCT...CTCACAGCTGCCCCTCCCTCGAGACTGGCCAGCCCACCTCTCCCGGCCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CAA 90 bp TGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCCGATGGGCCCCAGGCTaGGACGGCAGCAGATTGAGG +
Preference number: 5 (lower is better)
Translates to: WAPGLDGSRLRQDSTQDFRWAPG*DGSRLR
Trigger: CCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG...GAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS TCA 90 bp AGGCATCTGGATCCATGGGAGCACCCTCCGAAGCCCGTGCACTGGTaGCACCATATGGCTTCGGCTGCAGCCAGCTGCAGGCTCAGGACG +
Preference number: 5 (lower is better)
Translates to: RHLDPWEHPPKPVHW*HHMASAAASCRLRT
Trigger: CGTCCTGAGCCTGCAGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS GCA 90 bp AGTCCCTCAGGCATCTGGATCCATGGGAGCACCCTCCGAAGCCCGTaGACTGGTGACACCATATGGCTTCGGCTGCAGCCAGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SPSGIWIHGSTLRSP*TGDTIWLRLQPAAG
Trigger: GCCTGCAGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCCTGAGGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CAA 90 bp AGGTCGGGACCTGAAGGGGCGGCAGGCACGATGGGCCCCAGGCTTGGACGGCAGTCCAATCACATTTTATaGTGGGGAGGTCGGGACCTG +
Preference number: 5 (lower is better)
Translates to: RSGPEGAAGTMGPRLGRQSNHIL*WGGRDL
Trigger: CAGGTCCCGACCTCCCCACAATAAAATGTGATTGGA...CTGCCGTCCAAGCCTGGGGCCCATCGTGCCTGCCGCCCCTTCAGGTCCCGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CAA 90 bp TGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCTTGGACGGCAGCAGATaGAGGCAAGACTCCACGCAG +
Preference number: 5 (lower is better)
Translates to: WAPGLDGSRLRQDSTQDFLDGSR*RQDSTQ
Trigger: CTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAA...GAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CAA 90 bp CGATGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACCCTATGTGGCACATCTaGGTGACCAGAGGCAAATCC +
Preference number: 5 (lower is better)
Translates to: RWAPGLDGSRLRQDSTQDPMWHI*VTRGKS
Trigger: GGATTTGCCTCTGGTCACCAAGATGTGCCACATAGG...GTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CAA 90 bp TGGGCCCCAGGCTTGGACGGCAGCAGATTGAGGCAAGACTCCACGCAGGACTTCTCCAATCACATTTTATaGTGGGGAGGTCGGGACCTG +
Preference number: 5 (lower is better)
Translates to: WAPGLDGSRLRQDSTQDFSNHIL*WGGRDL
Trigger: CAGGTCCCGACCTCCCCACAATAAAATGTGATTGGA...GAAGTCCTGCGTGGAGTCTTGCCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS-3UTR CAA 90 bp TTGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGCGATGGGCCCCAGGCTaGGACGGCAGCAGATTGAGG +
Preference number: 5 (lower is better)
Translates to: LYHTIQSHFIVGRSGPEGRWAPG*DGSRLR
Trigger: CCTCAATCTGCTGCCGTCCAAGCCTGGGGCCCATCG...CCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS-3UTR CAA 90 bp TTGTACCACACGATCCAATCACATTTTATTGTGGGGAGGTCGGGACCTGAAGGGGGCAAATCCTCGGTGTaGCTGAGGACCCGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LYHTIQSHFIVGRSGPEGGKSSV*LRTRVA
Trigger: TGCCACCCGGGTCCTCAGCAACACCGAGGATTTGCC...CCCTTCAGGTCCCGACCTCCCCACAATAAAATGTGATTGGATCGTGTGGTACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS CCA 72 bp GCGTCCGGGGGCCTGGAGGAGGGCAGCCGTCAGTCATaGTTGCAGAGGCTGGTCTGGCAGCAAGCGATGGAT +
Preference number: 6 (lower is better)
Translates to: ASGGLEEGSRQS*LQRLVWQQAMD
Trigger: ATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCAGGCCCCCGGACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS GCA 72 bp CCGGGGGCCTGGAGGAGGGCAGCCGTCAGTCATGGTTaGAGAGGCTGGTCTGGCAGCAAGCGATGGATACGT +
Preference number: 6 (lower is better)
Translates to: PGAWRRAAVSHG*RGWSGSKRWIR
Trigger: ACGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCAGGCCCCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS CCA 72 bp AGCACCCTCCGAAGCCCGTGCACTGGTGACACCATATaGCTTCGGCTGCAGCCAGCTGCAGGCTCAGGACGG +
Preference number: 6 (lower is better)
Translates to: STLRSPCTGDTI*LRLQPAAGSGR
Trigger: CCGTCCTGAGCCTGCAGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS CAA 72 bp TCCGGGGGCCTGGAGGAGGGCAGCCGTCAGTCATGGTaGCAGAGGCTGGTCTGGCAGCAAGCGATGGATACG +
Preference number: 6 (lower is better)
Translates to: SGGLEEGSRQSW*QRLVWQQAMDT
Trigger: CGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCAGGCCCCCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS TCA 72 bp GATCCATGGGAGCACCCTCCGAAGCCCGTGCACTGGTaGCACCATATGGCTTCGGCTGCAGCCAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: DPWEHPPKPVHW*HHMASAAASCR
Trigger: CCTGCAGCTGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCTCCCATGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS CAA 90 bp CCCAGGCCCAGGCTGGGGATATCGGGGCAGCCTATGTGGCACATCTaGGTGACCAGAGGCAAATCCTCGGTGTTGCTGAGGACCCGGGTG +
Preference number: 6 (lower is better)
Translates to: PRPRLGISGQPMWHI*VTRGKSSVLLRTRV
Trigger: CACCCGGGTCCTCAGCAACACCGAGGATTTGCCTCTGGTCACCAAGATGTGCCACATAGGCTGCCCCGATATCCCCAGCCTGGGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS GCA 72 bp GGCATCTGGATCCATGGGAGCACCCTCCGAAGCCCGTaGACTGGTGACACCATATGGCTTCGGCTGCAGCCA +
Preference number: 6 (lower is better)
Translates to: GIWIHGSTLRSP*TGDTIWLRLQP
Trigger: TGGCTGCAGCCGAAGCCATATGGTGTCACCAGTGCACGGGCTTCGGAGGGTGCTCCCATGGATCCAGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317543.12
ENST00000521396.1
CDS CCA 72 bp CCCAGGCCCAGGCTGGGGATATCGGGGCAGCCTATGTaGCACATCTTGGTGACCAGAGGCAAATCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: PRPRLGISGQPM*HILVTRGKSSV
Trigger: CACCGAGGATTTGCCTCTGGTCACCAAGATGTGCCACATAGGCTGCCCCGATATCCCCAGCCTGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS CCA 72 bp TGGAGGAGGGCAGCCGTCAGTCATGGTTGCAGAGGCTaGTCTGGCAGCAAGCGATGGATACGTAGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: WRRAAVSHGCRG*SGSKRWIRRGP
Trigger: TGGGCCCCTACGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACTGACGGCTGCCCTCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS CCA 72 bp AGTCATGGTTGCAGAGGCTGGTCTGGCAGCAAGCGATaGATACGTAGGGGCCCAGGCCCAGGCTGGGGATAT +
Preference number: 6 (lower is better)
Translates to: SHGCRGWSGSKR*IRRGPGPGWGY
Trigger: ATATCCCCAGCCTGGGCCTGGGCCCCTACGTATCCATCGCTTGCTGCCAGACCAGCCTCTGCAACCATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS CAA 72 bp TGGCACATCTTGGTGACCAGAGGCAAATCCTCGGTGTaGCTGAGGACCCGGGTGGCAGTGGTGACACAGTGG +
Preference number: 6 (lower is better)
Translates to: WHILVTRGKSSV*LRTRVAVVTQW
Trigger: CCACTGTGTCACCACTGCCACCCGGGTCCTCAGCAACACCGAGGATTTGCCTCTGGTCACCAAGATGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317543.12
CDS CAA 72 bp AGGCTGGGGATATCGGGGCAGCCTATGTGGCACATCTaGGTGACCAGAGGCAAATCCTCGGTGTTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: RLGISGQPMWHI*VTRGKSSVLLR
Trigger: CCTCAGCAACACCGAGGATTTGCCTCTGGTCACCAAGATGTGCCACATAGGCTGCCCCGATATCCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317543.12