RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLURP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000126233

Ensembl transcript IDs: ENST00000246515.2

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCCAGAGAGGAGGTGCCTaGGGAGCACCTTCCGCCCTG +
Preference number: 2 (lower is better)
Translates to: PWCASLPSDPMSELCHSSQRGGA*GAPSAL
Trigger: CAGGGCGGAAGGTGCTCCTCAGGCACCTCCTCTCTG...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
3UTR-3UTR GCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCCCGTCAGAGAGGAGGTaGCTGAGGAGCACCTTCCGC +
Preference number: 2 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPPSERR*LRSTFR
Trigger: GCGGAAGGTGCTCCTCAGGCACCTCCTCTCTGACGG...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246515.2
3UTR-3UTR CCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCGGAGGTGATCACAGGTaGAGCCAGGCCCCGTCAGAG +
Preference number: 2 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPGGDHR*SQAPSE
Trigger: CTCTGACGGGGCCTGGCTCCACCTGTGATCACCTCC...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCGGTGGGCGGCCCCGATaGTGTCGGGGTCGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSGGRPR*CRGRWP
Trigger: TGGCCACCGACCCCGACAGCATCGGGGCCGCCCACC...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCTGCTGTCGGGGTCGGTaGCCACACAGGAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSCCRGR*PHRSWS
Trigger: GCTCCAGCTCCTGTGTGGCCACCGACCCCGACAGCA...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCGGCAGAGGGCGCCCCTaGTGTGCTTCTCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSGRGRP*CASLPS
Trigger: TGAGGGGAGAGAAGCACACCAGGGGCGCCCTCTGCC...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCGCCACGAGCAGCAGCTaGACAGCCCAGCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPATSSS*TAQREA
Trigger: GGCCTCTCGCTGGGCTGTGCAGCTGCTGCTCGTGGC...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCCCTCACCACAGCCCATaGTCCAGGCTGCCACGAGCA +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSPHHSP*SRLPRA
Trigger: TGCTCGTGGCAGCCTGGAGCATGGGCTGTGGTGAGG...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCCAGCAGAAGATCAGGTaGGCGGCCCCGATGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSQQKIR*AAPMLS
Trigger: CGACAGCATCGGGGCCGCCCACCTGATCTTCTGCTG...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCTCCGCCCTGCCGCCCTaGGTTCAGAGTTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSSALPP*VQSSEL
Trigger: CAACTCGGAACTCTGAACCCAGGGCGGCAGGGCGGA...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR TCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCCAGAGAGGAGGTGCCTaGGGAGCACCTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPQRGGA*GAPSAL
Trigger: CAGGGCGGAAGGTGCTCCTCAGGCACCTCCTCTCTG...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR TCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCTCCCCTCAGACCCCATaGGTGAGCTGTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSSPQTP*VSCATA
Trigger: TGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGA...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCAGGGCGCCCCTGGTGTaGTTCTCTCCCCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPRAPLV*FSPLRP
Trigger: GGGTCTGAGGGGAGAGAAGCACACCAGGGGCGCCCT...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCGTCACCACGGGGCTCTaGTTGAAGGGGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSVTTGL*LKGYSA
Trigger: GGCAGAGTACCCCTTCAACCAGAGCCCCGTGGTGAC...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR TCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCCCACGGGGCTCTGGTTaGAGGGGTACTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPPRGSG*RGTLPP
Trigger: TGGAGGCAGAGTACCCCTTCAACCAGAGCCCCGTGG...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCCCCATGAGTGAGCTGTaGCACAGCAGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSPMSEL*HSSRKQ
Trigger: CTGCTTCCTGCTGCTGTGGCACAGCTCACTCATGGG...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCGCAGGCTGTGTCCTCTaGCTTGCAGCGGGTAATGGT +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSAGCVL*LAAGNG
Trigger: ACCATTACCCGCTGCAAGCCAGAGGACACAGCCTGC...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR TCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCTGCAGGTGTAGCACTTaGGGGCCTCACCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPCRCST*GPHHSP
Trigger: TGGGCTGTGGTGAGGCCCTCAAGTGCTACACCTGCA...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR TCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTaGGCTGTGCCACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPLRPHE*AVPQQQ
Trigger: CTGCTGCTGTGGCACAGCTCACTCATGGGGTCTGAG...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp CCCTGGTGTGCTTCTCTCCCCTCAGACCCCATGAGTGAGCTGTGCCACAGCAGCCCAGCGAGAGGCCATTaGTCCGTGCTCAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: PWCASLPSDPMSELCHSSPARGH*SVLRSD
Trigger: ATCACTTCTGAGCACGGAGCAATGGCCTCTCGCTGG...GCTGCTGTGGCACAGCTCACTCATGGGGTCTGAGGGGAGAGAAGCACACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCTCACCAGCGTGGTCATaGAGGCTGTGTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPSPAWS*RLCPLA
Trigger: AGCCAGAGGACACAGCCTGCATGACCACGCTGGTGA...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCGTTGAAGGGGTACTCTaGCTCCACCGTCACCAGCGT +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPVEGVL*LHRHQR
Trigger: ACGCTGGTGACGGTGGAGGCAGAGTACCCCTTCAAC...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCTATAAGCGTGGGGTATaGAAGGCAGAGGGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPYKRGV*KAEGAP
Trigger: AGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATA...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR GCA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCTTCAGAGTTCCGAGTTaGAGAGGTCTCGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPFRVPS*RGLGSS
Trigger: GCTGCTTCCGAGACCTCTGCAACTCGGAACTCTGAA...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS GCA 90 bp TGCAGAGGTCTCGGAAGCAGCAGAAGATCAGGTGGGCGGCCCCGATaGTGTCGGGGTCGGTGGCCACACAGGAGCTGGAGCAGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: CRGLGSSRRSGGRPR*CRGRWPHRSWSRSG
Trigger: CCCGCTCCTGCTCCAGCTCCTGTGTGGCCACCGACCCCGACAGCATCGGGGCCGCCCACCTGATCTTCTGCTGCTTCCGAGACCTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS GCA 90 bp CCAGGCCCCGTCAGAGAGGAGGTGCCTGAGGAGCACCTTCCGCCCTaGCGCCCTGGGTTCAGAGTTCCGAGTTGCAGAGGTCTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: PGPVREEVPEEHLPP*RPGFRVPSCRGLGS
Trigger: GCTTCCGAGACCTCTGCAACTCGGAACTCTGAACCCAGGGCGGCAGGGCGGAAGGTGCTCCTCAGGCACCTCCTCTCTGACGGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS GCA 90 bp GAGGAGCACCTTCCGCCCTGCCGCCCTGGGTTCAGAGTTCCGAGTTaGAGAGGTCTCGGAAGCAGCAGAAGATCAGGTGGGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: EEHLPPCRPGFRVPS*RGLGSSRRSGGRPR
Trigger: TCGGGGCCGCCCACCTGATCTTCTGCTGCTTCCGAGACCTCTGCAACTCGGAACTCTGAACCCAGGGCGGCAGGGCGGAAGGTGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS CCA 90 bp CAGAGTTCCGAGTTGCAGAGGTCTCGGAAGCAGCAGAAGATCAGGTaGGCGGCCCCGATGCTGTCGGGGTCGGTGGCCACACAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QSSELQRSRKQQKIR*AAPMLSGSVATQEL
Trigger: CAGCTCCTGTGTGGCCACCGACCCCGACAGCATCGGGGCCGCCCACCTGATCTTCTGCTGCTTCCGAGACCTCTGCAACTCGGAACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS CCA 90 bp CTCTGCCTCCACCGTCACCAGCGTGGTCATGCAGGCTGTGTCCTCTaGCTTGCAGCGGGTAATGGTCCTGCAGGAAGCACTGGTCATGGG +
Preference number: 5 (lower is better)
Translates to: LCLHRHQRGHAGCVL*LAAGNGPAGSTGHG
Trigger: CCCATGACCAGTGCTTCCTGCAGGACCATTACCCGCTGCAAGCCAGAGGACACAGCCTGCATGACCACGCTGGTGACGGTGGAGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CAA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCACCACGGGGCTCTGGTaGAAGGGGTACTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPTTGLW*KGYSAS
Trigger: GGAGGCAGAGTACCCCTTCAACCAGAGCCCCGTGGT...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CAA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCGCTGTGTCCTCTGGCTaGCAGCGGGTAATGGTCCTG +
Preference number: 5 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPAVSSG*QRVMVL
Trigger: CAGGACCATTACCCGCTGCAAGCCAGAGGACACAGC...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS-3UTR CAA 90 bp TTTATAAGCGTGGGGTATGGAAGGCAGAGGGCGCCCCTGGTGTGCTTCTCTCCCGTTCAGAGTTCCGAGTaGCAGAGGTCTCGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: FISVGYGRQRAPLVCFSPVQSSE*QRSRKQ
Trigger: CTGCTTCCGAGACCTCTGCAACTCGGAACTCTGAAC...GGGAGAGAAGCACACCAGGGGCGCCCTCTGCCTTCCATACCCCACGCTTATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS GCA 72 bp CTCGGAAGCAGCAGAAGATCAGGTGGGCGGCCCCGATaGTGTCGGGGTCGGTGGCCACACAGGAGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LGSSRRSGGRPR*CRGRWPHRSWS
Trigger: GCTCCAGCTCCTGTGTGGCCACCGACCCCGACAGCATCGGGGCCGCCCACCTGATCTTCTGCTGCTTCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS CCA 72 bp CAGGAGCTGGAGCAGGAGCGGGTCACCACGGGGCTCTaGTTGAAGGGGTACTCTGCCTCCACCGTCACCAGC +
Preference number: 6 (lower is better)
Translates to: QELEQERVTTGL*LKGYSASTVTS
Trigger: GCTGGTGACGGTGGAGGCAGAGTACCCCTTCAACCAGAGCCCCGTGGTGACCCGCTCCTGCTCCAGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS CCA 72 bp GAGTTGCAGAGGTCTCGGAAGCAGCAGAAGATCAGGTaGGCGGCCCCGATGCTGTCGGGGTCGGTGGCCACA +
Preference number: 6 (lower is better)
Translates to: ELQRSRKQQKIR*AAPMLSGSVAT
Trigger: TGTGGCCACCGACCCCGACAGCATCGGGGCCGCCCACCTGATCTTCTGCTGCTTCCGAGACCTCTGCAACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS GCA 72 bp GTCAGAGAGGAGGTGCCTGAGGAGCACCTTCCGCCCTaGCGCCCTGGGTTCAGAGTTCCGAGTTGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: VREEVPEEHLPP*RPGFRVPSCRG
Trigger: ACCTCTGCAACTCGGAACTCTGAACCCAGGGCGGCAGGGCGGAAGGTGCTCCTCAGGCACCTCCTCTCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS CAA 90 bp GCCTCCACCGTCACCAGCGTGGTCATGCAGGCTGTGTCCTCTGGCTaGCAGCGGGTAATGGTCCTGCAGGAAGCACTGGTCATGGGCTCC +
Preference number: 6 (lower is better)
Translates to: ASTVTSVVMQAVSSG*QRVMVLQEALVMGS
Trigger: GGAGCCCATGACCAGTGCTTCCTGCAGGACCATTACCCGCTGCAAGCCAGAGGACACAGCCTGCATGACCACGCTGGTGACGGTGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS CCA 72 bp CACCGTCACCAGCGTGGTCATGCAGGCTGTGTCCTCTaGCTTGCAGCGGGTAATGGTCCTGCAGGAAGCACT +
Preference number: 6 (lower is better)
Translates to: HRHQRGHAGCVL*LAAGNGPAGST
Trigger: AGTGCTTCCTGCAGGACCATTACCCGCTGCAAGCCAGAGGACACAGCCTGCATGACCACGCTGGTGACGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246515.2
CDS CAA 72 bp GTCACCAGCGTGGTCATGCAGGCTGTGTCCTCTGGCTaGCAGCGGGTAATGGTCCTGCAGGAAGCACTGGTC +
Preference number: 6 (lower is better)
Translates to: VTSVVMQAVSSG*QRVMVLQEALV
Trigger: GACCAGTGCTTCCTGCAGGACCATTACCCGCTGCAAGCCAGAGGACACAGCCTGCATGACCACGCTGGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246515.2