Pregenerated sensors for SLPI (Homo sapiens)
Ensembl gene IDs: ENSG00000124107Ensembl transcript IDs: ENST00000338380.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCAGTGGTaGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: SLLCAKPFPKGGYQW*SQVSGWKGPGPHRA Trigger: TGCTCTGTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| 3UTR CCA 90 bp | GAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCAGTaGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACAGA | + |
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Preference number: 1 (lower is better) Translates to: ESLLCAKPFPKGGYQ*WSQVSGWKGPGPHR Trigger: TCTGTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| 3UTR GCA 90 bp | GGCTCGTTTATTTATTCATTGATCAACTGGCACTTCTTGAAAGCCTaGTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: GSFIYSLINWHFLKA*CVPSLSPKEDISGG Trigger: TCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTCAAGAAGTGCCAGTTGATCAATGAATAAATAAACGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| 3UTR CAA 90 bp | AGAGAAATAGGCTCGTTTATTTATTCATTGATCAACTGGCACTTCTaGAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATC | + |
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Preference number: 2 (lower is better) Translates to: REIGSFIYSLINWHF*KACCVPSLSPKEDI Trigger: GATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTCAAGAAGTGCCAGTTGATCAATGAATAAATAAACGAGCCTATTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| 3UTR CCA 72 bp | CTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCAGTaGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LCAKPFPKGGYQ*WSQVSGWKGPG Trigger: TCCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGGCACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| 3UTR GCA 72 bp | ATTTATTCATTGATCAACTGGCACTTCTTGAAAGCCTaGTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATC | + |
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Preference number: 3 (lower is better) Translates to: IYSLINWHFLKA*CVPSLSPKEDI Trigger: GATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTCAAGAAGTGCCAGTTGATCAATGAATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR TCA 90 bp | GGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACCAGGATCCAGGCATTTaGTGCCACAAGTGTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GGYQWWSQVSGWKGPGPHQDPGI*CHKCQD Trigger: GTCCTGACACTTGTGGCATCAAATGCCTGGATCCTG...GTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR GCA 90 bp | GTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACAGAGCAGGACTCCATCCCACACATGCCCATaGAACACTTCAAGTCACGCT | + |
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Preference number: 4 (lower is better) Translates to: VEPSLRVERTWTTQSRTPSHTCP*NTSSHA Trigger: AGCGTGACTTGAAGTGTTGCATGGGCATGTGTGGGA...TGGAGTCCTGCTCTGTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CCA 90 bp | GAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACAGAGCAGGACTCCAGAGACATCTCTTCTTCCCTaGACACTGCCAGTCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: EPSLRVERTWTTQSRTPETSLLP*TLPVTL Trigger: CAGAGTGACTGGCAGTGTCCAGGGAAGAAGAGATGT...CTCTGGAGTCCTGCTCTGTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CCA 90 bp | GGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACAGGCTTCCTCCTTGTTaGGTTTGGGGTGTCAACAGG | + |
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Preference number: 4 (lower is better) Translates to: GGYQWWSQVSGWKGPGPHRLPPC*VWGVNR Trigger: CCTGTTGACACCCCAAACCCAACAAGGAGGAAGCCT...GTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CCA 90 bp | AAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCAAGCCAAGTCTCAGGGTaGAAAGGACCTGGACCACAC | + |
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Preference number: 4 (lower is better) Translates to: KGGYQWWSQVSGWKGPGPSQVSG*KGPGPH Trigger: GTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCT...TGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGATCAACTGGCACTTCTTaGAAGCCTGCTGTGTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PSLSPKEDISGGAKSQGGSTGTS*KPAVCQ Trigger: TTGGCACACAGCAGGCTTTCAAGAAGTGCCAGTTGA...TCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR GCA 90 bp | GGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACAGAACTTCAAGTCACGCTTaGACTGGCCATCCATCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GYQWWSQVSGWKGPGPHRTSSHA*TGHPSH Trigger: GTGAGATGGATGGCCAGTGCAAGCGTGACTTGAAGT...TCTGTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR TCA 90 bp | CAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAGACAGACTCCAGCTTTaGAGGACTTTCCAGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QAFPQRRISVVEPSLRVEDRLQL*RTFQSL Trigger: AAGGCTCTGGAAAGTCCTTCAAAGCTGGAGTCTGTC...TTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CCA 90 bp | TGGCACTTCTTGAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCCCTCCTTGTTGGGTTTaGGGTGTCAACAGGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: WHFLKACCVPSLSPKEDIPPCWV*GVNRIQ Trigger: CTGGATCCTGTTGACACCCCAAACCCAACAAGGAGG...GATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTCAAGAAGTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CCA 90 bp | CCAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGTCACGCTTGCACTaGCCATCCATCTCACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: PSLSPKEDISGGAKSQGGKSRLH*PSISQK Trigger: TTTCTGTGAGATGGATGGCCAGTGCAAGCGTGACTT...TCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGAAAAGGAGGATATCAGTaGTGGAGCCAAGTCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PFPKGGYQWWSQVSGWKGKGGYQ*WSQVSG Trigger: CCCTGAGACTTGGCTCCACCACTGATATCCTCCTTT...TCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR GCA 90 bp | TTGAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGACACTTCTTGAAAGCCTaGTGTGTGCCAAGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LKACCVPSLSPKEDISGGHFLKA*CVPSLS Trigger: GGAAAGGCTTGGCACACAGCAGGCTTTCAAGAAGTG...TCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CCA 90 bp | CAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGAGCCTCCTCCATATaGCAGGAATCAAGCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QAFPQRRISVVEPSLRVERASSI*QESSFH Trigger: GTGAAAGCTTGATTCCTGCCATATGGAGGAGGCTCT...TTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CCA 90 bp | TTGAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGATTGTATCTAAGGCACTaGGCAGATTTCTTAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LKACCVPSLSPKEDISGGLYLRH*ADFLGG Trigger: TCCTCCTAAGAAATCTGCCCAGTGCCTTAGATACAA...TCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| 3UTR CAA 72 bp | GGCTCGTTTATTTATTCATTGATCAACTGGCACTTCTaGAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GSFIYSLINWHF*KACCVPSLSPK Trigger: CTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTCAAGAAGTGCCAGTTGATCAATGAATAAATAAACGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGAGAAATAGGCTCGTTTATTTATTCATTGATCAACTGGCACTTCTTGAATTCTTCCCTGGACACTaGCAGTCACTCTGGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: AKRNRLVYLFIDQLALLEFFPGH*QSLWHS Trigger: TGAGTGCCAGAGTGACTGGCAGTGTCCAGGGAAGAA...TTCAAGAAGTGCCAGTTGATCAATGAATAAATAAACGAGCCTATTTCTCTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CAA 90 bp | GTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACAGAGCAGGACTCCATCCCAGGCTTCCTCCTaGTTGGGTTTGGGGTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: VEPSLRVERTWTTQSRTPSQASS*LGLGCQ Trigger: TTGACACCCCAAACCCAACAAGGAGGAAGCCTGGGA...TGGAGTCCTGCTCTGTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CAA 90 bp | GGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACTCCTCCTTGTTGGGTTaGGGGTGTCAACAGGATCCA | + |
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Preference number: 5 (lower is better) Translates to: GGYQWWSQVSGWKGPGPHSSLLG*GCQQDP Trigger: TGGATCCTGTTGACACCCCAAACCCAACAAGGAGGA...GTGTGGTCCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CAA 90 bp | GTGCCAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTCAGGCTTCCTCCTTGTaGGGTTTGGGGTGTCAACAG | + |
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Preference number: 5 (lower is better) Translates to: VPSLSPKEDISGGAKSQGQASSL*GLGCQQ Trigger: CTGTTGACACCCCAAACCCAACAAGGAGGAAGCCTG...ACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CAA 90 bp | GAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCAGTGGTGGAGCGGACAGACTCCAGCTTaGAAGGACTTTCCAGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: ESLLCAKPFPKGGYQWWSGQTPA*KDFPEP Trigger: AGGCTCTGGAAAGTCCTTCAAAGCTGGAGTCTGTCC...GCTCCACCACTGATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CAA 90 bp | TTTCCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGACCCACTTCAAGTCACGCTaGCACTGGCCATCCATCTCA | + |
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Preference number: 5 (lower is better) Translates to: FPQRRISVVEPSLRVERTHFKSR*HWPSIS Trigger: TGAGATGGATGGCCAGTGCAAGCGTGACTTGAAGTG...GGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS GCA 90 bp | GCAGGAATCAAGCTTTCACAGGGGAAACGCAGGATTTCCCACACATaGCCATGCAACACTTCAAGTCACGCTTGCACTGGCCATCCATCT | + |
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Preference number: 5 (lower is better) Translates to: AGIKLSQGKRRISHT*PCNTSSHACTGHPS Trigger: AGATGGATGGCCAGTGCAAGCGTGACTTGAAGTGTTGCATGGGCATGTGTGGGAAATCCTGCGTTTCCCCTGTGAAAGCTTGATTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CAA 90 bp | CCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGGTTAAGCATCAAACATaGGCCATAAGTCACTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: PQRRISVVEPSLRVERTWVKHQT*AISHWA Trigger: TGCCCAGTGACTTATGGCCAATGTTTGATGCTTAAC...CCAGGTCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CAA 90 bp | CCTTTCCCCAAAGGAGGATATCAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGAATCAACTGGCACTTCTaGAAAGCCTGCTGTGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PFPKGGYQWWSQVSGWKGINWHF*KACCVP Trigger: TGGCACACAGCAGGCTTTCAAGAAGTGCCAGTTGAT...TCCTTTCCACCCTGAGACTTGGCTCCACCACTGATATCCTCCTTTGGGGAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS TCA 90 bp | GCTTCCTCCTTGTTGGGTTTGGGGTGTCAACAGGATCCAGGCATTTaGTGCCACAAGTGTCAGGACAACATCTCTTCTTCCCTGGACACT | + |
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Preference number: 5 (lower is better) Translates to: ASSLLGLGCQQDPGI*CHKCQDNISSSLDT Trigger: AGTGTCCAGGGAAGAAGAGATGTTGTCCTGACACTTGTGGCATCAAATGCCTGGATCCTGTTGACACCCCAAACCCAACAAGGAGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS GCA 90 bp | ATCAAGCTTTCACAGGGGAAACGCAGGATTTCCCACACATGCCCATaGAACACTTCAAGTCACGCTTGCACTGGCCATCCATCTCACAGA | + |
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Preference number: 5 (lower is better) Translates to: IKLSQGKRRISHTCP*NTSSHACTGHPSHR Trigger: TCTGTGAGATGGATGGCCAGTGCAAGCGTGACTTGAAGTGTTGCATGGGCATGTGTGGGAAATCCTGCGTTTCCCCTGTGAAAGCTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS-3UTR CAA 90 bp | TGGCACTTCTTGAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATATCTGGCACTCAGGTTTCTaGTATCTAAGGCACTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: WHFLKACCVPSLSPKEDIWHSGF*YLRHWA Trigger: TGCCCAGTGCCTTAGATACAAGAAACCTGAGTGCCA...GATATCCTCCTTTGGGGAAAGGCTTGGCACACAGCAGGCTTTCAAGAAGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS GCA 90 bp | TTGATGCCACAAGTGTCAGGACAACATCTCTTCTTCCCTGGACACTaGCAGTCACTCTGGCACTCAGGTTTCTTGTATCTAAGGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: LMPQVSGQHLFFPGH*QSLWHSGFLYLRHW Trigger: CCAGTGCCTTAGATACAAGAAACCTGAGTGCCAGAGTGACTGGCAGTGTCCAGGGAAGAAGAGATGTTGTCCTGACACTTGTGGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS CCA 90 bp | GTGTCAGGACAACATCTCTTCTTCCCTGGACACTGCCAGTCACTCTaGCACTCAGGTTTCTTGTATCTAAGGCACTGGGCAGATTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: VSGQHLFFPGHCQSL*HSGFLYLRHWADFL Trigger: TAAGAAATCTGCCCAGTGCCTTAGATACAAGAAACCTGAGTGCCAGAGTGACTGGCAGTGTCCAGGGAAGAAGAGATGTTGTCCTGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS CCA 90 bp | CAGGCATTTGATGCCACAAGTGTCAGGACAACATCTCTTCTTCCCTaGACACTGCCAGTCACTCTGGCACTCAGGTTTCTTGTATCTAAG | + |
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Preference number: 5 (lower is better) Translates to: QAFDATSVRTTSLLP*TLPVTLALRFLVSK Trigger: CTTAGATACAAGAAACCTGAGTGCCAGAGTGACTGGCAGTGTCCAGGGAAGAAGAGATGTTGTCCTGACACTTGTGGCATCAAATGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS GCA 72 bp | TCACAGGGGAAACGCAGGATTTCCCACACATGCCCATaGAACACTTCAAGTCACGCTTGCACTGGCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: SQGKRRISHTCP*NTSSHACTGHP Trigger: TGGATGGCCAGTGCAAGCGTGACTTGAAGTGTTGCATGGGCATGTGTGGGAAATCCTGCGTTTCCCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS GCA 72 bp | AAGCTTTCACAGGGGAAACGCAGGATTTCCCACACATaGCCATGCAACACTTCAAGTCACGCTTGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: KLSQGKRRISHT*PCNTSSHACTG Trigger: GCCAGTGCAAGCGTGACTTGAAGTGTTGCATGGGCATGTGTGGGAAATCCTGCGTTTCCCCTGTGAAAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS CAA 90 bp | GGCTTCCTCCTTGTTGGGTTTGGGGTGTCAACAGGATCCAGGCATTaGATGCCACAAGTGTCAGGACAACATCTCTTCTTCCCTGGACAC | + |
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Preference number: 6 (lower is better) Translates to: GFLLVGFGVSTGSRH*MPQVSGQHLFFPGH Trigger: GTGTCCAGGGAAGAAGAGATGTTGTCCTGACACTTGTGGCATCAAATGCCTGGATCCTGTTGACACCCCAAACCCAACAAGGAGGAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS CAA 90 bp | CTCTTCTTCCCTGGACACTGCCAGTCACTCTGGCACTCAGGTTTCTaGTATCTAAGGCACTGGGCAGATTTCTTAGGAGGACAGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: LFFPGHCQSLWHSGF*YLRHWADFLGGQTP Trigger: TGGAGTCTGTCCTCCTAAGAAATCTGCCCAGTGCCTTAGATACAAGAAACCTGAGTGCCAGAGTGACTGGCAGTGTCCAGGGAAGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS TCA 72 bp | TTGTTGGGTTTGGGGTGTCAACAGGATCCAGGCATTTaGTGCCACAAGTGTCAGGACAACATCTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLGLGCQQDPGI*CHKCQDNISSS Trigger: GGAAGAAGAGATGTTGTCCTGACACTTGTGGCATCAAATGCCTGGATCCTGTTGACACCCCAAACCCAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS GCA 72 bp | CAAGTGTCAGGACAACATCTCTTCTTCCCTGGACACTaGCAGTCACTCTGGCACTCAGGTTTCTTGTATCTA | + |
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Preference number: 6 (lower is better) Translates to: QVSGQHLFFPGH*QSLWHSGFLYL Trigger: TAGATACAAGAAACCTGAGTGCCAGAGTGACTGGCAGTGTCCAGGGAAGAAGAGATGTTGTCCTGACACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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| CDS CCA 72 bp | TCACTCTGGCACTCAGGTTTCTTGTATCTAAGGCACTaGGCAGATTTCTTAGGAGGACAGACTCCAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SLWHSGFLYLRH*ADFLGGQTPAL Trigger: CAAAGCTGGAGTCTGTCCTCCTAAGAAATCTGCCCAGTGCCTTAGATACAAGAAACCTGAGTGCCAGAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338380.2 |
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