RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLK (Homo sapiens)

Ensembl gene IDs: ENSG00000065613

Ensembl transcript IDs: ENST00000335753.8, ENST00000369755.4, ENST00000474260.1, ENST00000672560.1

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAGAAGTGTaGAGGTCTGCTGTGTTCACAGCACTCAGGGAAAGAGGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: GSLVPQAVGAGSAEV*RSAVFTALRERGEE
Trigger: CTCCTCCCCTCTTTCCCTGAGTGCTGTGAACACAGCAGACCTGCACACTTCTGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 90 bp GCAGGTCTGCTGTGTTCACAGCACTCAGGGAAAGAGGGGAGGAGGTaGCTGATGAGGGTGCACGTTCGGAGAAGTCTGTATGTGTTTCAT +
Preference number: 1 (lower is better)
Translates to: AGLLCSQHSGKEGRR*LMRVHVRRSLYVFH
Trigger: ATGAAACACATACAGACTTCTCCGAACGTGCACCCTCATCAGCCACCTCCTCCCCTCTTTCCCTGAGTGCTGTGAACACAGCAGACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR GCA 90 bp AAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTaGGCCCCTCGCCCACTCGCCACCTACACTTCATGCAGGAAAGAT +
Preference number: 1 (lower is better)
Translates to: KSAVDLTVPFDFKEV*APRPLATYTSCRKD
Trigger: ATCTTTCCTGCATGAAGTGTAGGTGGCGAGTGGGCGAGGGGCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 90 bp GTGGCTGATGAGGGTGCACGTTCGGAGAAGTCTGTATGTGTTTCATaGCATATTCTGCCACAGCAACAAAACAACCAAATCAGCAGTAGA +
Preference number: 1 (lower is better)
Translates to: VADEGARSEKSVCVS*HILPQQQNNQISSR
Trigger: TCTACTGCTGATTTGGTTGTTTTGTTGCTGTGGCAGAATATGCCATGAAACACATACAGACTTCTCCGAACGTGCACCCTCATCAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 90 bp CTTCATGAGCTATCTGAGAGACTGTGGCAGAAGATGAGAACAGAATaGCATACTGAAAGAGCCAAACCCACGCACAGAATGCTTCCCTTT +
Preference number: 1 (lower is better)
Translates to: LHELSERLWQKMRTE*HTERAKPTHRMLPF
Trigger: AAAGGGAAGCATTCTGTGCGTGGGTTTGGCTCTTTCAGTATGTCATTCTGTTCTCATCTTCTGCCACAGTCTCTCAGATAGCTCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 90 bp CAAACCAGAGAAGGAGCACAAAAAGCTGCAGCCCACATTGAAACCTaGCAAACACTCTCCGCCAAAATTAGTAGCAGGAATGTTAAAGCT +
Preference number: 1 (lower is better)
Translates to: QTREGAQKAAAHIET*QTLSAKISSRNVKA
Trigger: AGCTTTAACATTCCTGCTACTAATTTTGGCGGAGAGTGTTTGCCAGGTTTCAATGTGGGCTGCAGCTTTTTGTGCTCCTTCTCTGGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR GCA 90 bp AGGGTGCACGTTCGGAGAAGTCTGTATGTGTTTCATGGCATATTCTaGCACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTA +
Preference number: 1 (lower is better)
Translates to: RVHVRRSLYVFHGIF*HSNKTTKSAVDLTV
Trigger: TACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTGGCAGAATATGCCATGAAACACATACAGACTTCTCCGAACGTGCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 90 bp CACACGATTATGGTCATATTTGAAAGCGAACTCAAGCACAAACACTaGATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAG +
Preference number: 1 (lower is better)
Translates to: HTIMVIFESELKHKH*IQKAVLREIQPYPQ
Trigger: CTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGTTTGTGCTTGAGTTCGCTTTCAAATATGACCATAATCGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 90 bp AATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATaGCCTAGCGTCTGTCTTAGTTCGTTTTCCCTTCATCTTTGCTTA +
Preference number: 1 (lower is better)
Translates to: NIQSHLSHQDATLPT*PSVCLSSFSLHLCL
Trigger: TAAGCAAAGATGAAGGGAAAACGAACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 90 bp ATGTATCACTGTACAGTCTTGCACCCACACGATTATGGTCATATTTaGAAGCGAACTCAAGCACAAACACTGAATCCAAAAGGCAGTTTT +
Preference number: 1 (lower is better)
Translates to: MYHCTVLHPHDYGHI*KRTQAQTLNPKGSF
Trigger: AAAACTGCCTTTTGGATTCAGTGTTTGTGCTTGAGTTCGCTTTCAAATATGACCATAATCGTGTGGGTGCAAGACTGTACAGTGATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 90 bp ACCTCTACATATGTATCACTGTACAGTCTTGCACCCACACGATTATaGTCATATTTGAAAGCGAACTCAAGCACAAACACTGAATCCAAA +
Preference number: 1 (lower is better)
Translates to: TSTYVSLYSLAPTRL*SYLKANSSTNTESK
Trigger: TTTGGATTCAGTGTTTGTGCTTGAGTTCGCTTTCAAATATGACCATAATCGTGTGGGTGCAAGACTGTACAGTGATACATATGTAGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 90 bp GACAGCAAAGTACAGTTTATAATACTGTCTGACCTGACACGTGGTTaGAATTCTAAGCCTCATAAGGGACTAGGAGTGAACATTTCATTA +
Preference number: 1 (lower is better)
Translates to: DSKVQFIILSDLTRG*NSKPHKGLGVNISL
Trigger: TAATGAAATGTTCACTCCTAGTCCCTTATGAGGCTTAGAATTTCAACCACGTGTCAGGTCAGACAGTATTATAAACTGTACTTTGCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 90 bp ATCCCAACTCTCTGCAGCAGAGCTTCAACTACAGAATTTAGGCATTaGGAAGTTACGTCAGGTAAGAAGAATTTATTAATACTTAGTGAT +
Preference number: 1 (lower is better)
Translates to: IPTLCSRASTTEFRH*EVTSGKKNLLILSD
Trigger: ATCACTAAGTATTAATAAATTCTTCTTACCTGACGTAACTTCTCAATGCCTAAATTCTGTAGTTGAAGCTCTGCTGCAGAGAGTTGGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACCAACCATTCCACTCTaGGCCTCTCTCCTTGAGTCA +
Preference number: 2 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAPTIPL*ASLLES
Trigger: TGACTCAAGGAGAGAGGCTCAGAGTGGAATGGTTGG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACAGCCTGCAGGCCTCTaGCAGAGTTTTAAACAGAAT +
Preference number: 2 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAQPAGL*QSFKQN
Trigger: ATTCTGTTTAAAACTCTGTCAGAGGCCTGCAGGCTG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAACCAAGATGCTACTTTaGCAACATGGCCTAGCGTCT +
Preference number: 2 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSATKMLL*QHGLAS
Trigger: AGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACTATCTGAGAGACTGTaGCAGAAGATGAGAACAGAA +
Preference number: 2 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSALSERL*QKMRTE
Trigger: TTCTGTTCTCATCTTCTGCCACAGTCTCTCAGATAG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAGTTTATAATACTGTCTaGCCTGACACGTGGTTGAAA +
Preference number: 2 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAVYNTV*PDTWLK
Trigger: TTTCAACCACGTGTCAGGTCAGACAGTATTATAAAC...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 90 bp GGCATATTCTGCCACAGCAACAAAACAACCAAATCAGCAGTAGATTaGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCCCTCGCCCA +
Preference number: 2 (lower is better)
Translates to: GIFCHSNKTTKSAVD*TVPFDFKEVCAPRP
Trigger: TGGGCGAGGGGCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTGGCAGAATATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCACAGCCTGCAGGCCTCTaGCAGAGTTTTAAACAGAAT +
Preference number: 2 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPQPAGL*QSFKQN
Trigger: ATTCTGTTTAAAACTCTGTCAGAGGCCTGCAGGCTG...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCGGGCCTCAGAAGAGGTaGGCTGGTATGGGTACAAAC +
Preference number: 2 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRGPQKR*AGMGTN
Trigger: GTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCC...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 90 bp TTACACTGCAAACCAGAGAAGGAGCACAAAAAGCTGCAGCCCACATaGAAACCTGGCAAACACTCTCCGCCAAAATTAGTAGCAGGAATG +
Preference number: 2 (lower is better)
Translates to: LHCKPEKEHKKLQPT*KPGKHSPPKLVAGM
Trigger: CATTCCTGCTACTAATTTTGGCGGAGAGTGTTTGCCAGGTTTCAATGTGGGCTGCAGCTTTTTGTGCTCCTTCTCTGGTTTGCAGTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR GCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTATCACTGTACAGTCTTaGACCCACACGATTATGGTC +
Preference number: 2 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFITVQS*THTIMV
Trigger: GACCATAATCGTGTGGGTGCAAGACTGTACAGTGAT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 90 bp AATCAGAGACCCTTCATTAAGGTGGGTCTCATATGCCTGAGAGCTTaGTGCTTGAGGAAGTATGACTTAGAGGTAGCTCTGGTTCTGGTA +
Preference number: 2 (lower is better)
Translates to: NQRPFIKVGLICLRA*CLRKYDLEVALVLV
Trigger: TACCAGAACCAGAGCTACCTCTAAGTCATACTTCCTCAAGCACAAAGCTCTCAGGCATATGAGACCCACCTTAATGAAGGGTCTCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGAACAGAATGACATACTaGAAGAGCCAAACCCACGCA +
Preference number: 2 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLANRMTY*KSQTHA
Trigger: TGCGTGGGTTTGGCTCTTTCAGTATGTCATTCTGTT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCATTTCAAAGGAGAAAGTaGTATGAAGACGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPFQRRK*YEDVPS
Trigger: GGAAGGAACGTCTTCATACCACTTTCTCCTTTGAAA...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 90 bp AGACCCTTCATTAAGGTGGGTCTCATATGCCTGAGAGCTTTGTGCTaGAGGAAGTATGACTTAGAGGTAGCTCTGGTTCTGGTAATTTAT +
Preference number: 2 (lower is better)
Translates to: RPFIKVGLICLRALC*RKYDLEVALVLVIY
Trigger: ATAAATTACCAGAACCAGAGCTACCTCTAAGTCATACTTCCTCAAGCACAAAGCTCTCAGGCATATGAGACCCACCTTAATGAAGGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAAATCATCTAAATCACTaGCAAACAAGGTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITNHLNH*QTRFSI
Trigger: GATGCTGAACCTTGTTTGTCAGTGATTTAGATGATT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTAATCATCTAAATCACTaGCAAACAAGGTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFNHLNH*QTRFSI
Trigger: GATGCTGAACCTTGTTTGTCAGTGATTTAGATGATT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCAAGGAGAAAGTGGTATaGAGACGTTCCTTCCCAATC +
Preference number: 2 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRKEKVV*RRSFPI
Trigger: GATTGGGAAGGAACGTCTTCATACCACTTTCTCCTT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTGATTATGGTCATATTTaGAAGCGAACTCAAGCACAA +
Preference number: 2 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFDYGHI*KRTQAQ
Trigger: TTGTGCTTGAGTTCGCTTTCAAATATGACCATAATC...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTACCAAGATGCTACTTTaGCAACATGGCCTAGCGTCT +
Preference number: 2 (lower is better)
Translates to: TWPEVKATYEVVQVNYACTKMLL*QHGLAS
Trigger: AGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGCTACTTTGCCAACATaGCCTAGCGTCTGTCTTAGT +
Preference number: 2 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFATLPT*PSVCLS
Trigger: ACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAACAGAATGACATACTaGAAGAGCCAAACCCACGCA +
Preference number: 2 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFNRMTY*KSQTHA
Trigger: TGCGTGGGTTTGGCTCTTTCAGTATGTCATTCTGTT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCTGAGCCTCTCTCCTTaGGTCAATAATCTGAATGTC +
Preference number: 2 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFLSLSP*VNNLNV
Trigger: GACATTCAGATTATTGACTCAAGGAGAGAGGCTCAG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCTCACTATCATCTATTTaGATACAGGGCCTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRSLSSI*IQGLRR
Trigger: TCTTCTGAGGCCCTGTATTCAAATAGATGATAGTGA...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTACTTTGCCAACATaGCCTAGCGTCTGTCTTAGT +
Preference number: 2 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYATLPT*PSVCLS
Trigger: ACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGC...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 90 bp TTTAAGATGAATATACAAAGTCACCTTAGTCACCAAGATGCTACTTaGCCAACATGGCCTAGCGTCTGTCTTAGTTCGTTTTCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: FKMNIQSHLSHQDAT*PTWPSVCLSSFSLH
Trigger: ATGAAGGGAAAACGAACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATATTCATCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 90 bp TATGTATCACTGTACAGTCTTGCACCCACACGATTATGGTCATATTaGAAAGCGAACTCAAGCACAAACACTGAATCCAAAAGGCAGTTT +
Preference number: 2 (lower is better)
Translates to: YVSLYSLAPTRLWSY*KANSSTNTESKRQF
Trigger: AAACTGCCTTTTGGATTCAGTGTTTGTGCTTGAGTTCGCTTTCAAATATGACCATAATCGTGTGGGTGCAAGACTGTACAGTGATACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGACTGTGGCAGAAGATaGGAACAGAATGACATACTG +
Preference number: 2 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYDCGRR*EQNDIL
Trigger: CAGTATGTCATTCTGTTCTCATCTTCTGCCACAGTC...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGACCTGACACGTGGTTaGAATTCTAAGCCTCATAAG +
Preference number: 2 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYDLTRG*NSKPHK
Trigger: CTTATGAGGCTTAGAATTTCAACCACGTGTCAGGTC...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTGTTTATAATACTGTCTaGCCTGACACGTGGTTGAAA +
Preference number: 2 (lower is better)
Translates to: TWPEVKATYEVVQVNYACVYNTV*PDTWLK
Trigger: TTTCAACCACGTGTCAGGTCAGACAGTATTATAAAC...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCTCAAGCACAAACACTaGATCCAAAAGGCAGTTTTA +
Preference number: 2 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFLKHKH*IQKAVL
Trigger: TAAAACTGCCTTTTGGATTCAGTGTTTGTGCTTGAG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAGATGAGAACAGAATaGCATACTGAAAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFKMRTE*HTERAK
Trigger: TTTGGCTCTTTCAGTATGTCATTCTGTTCTCATCTT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATATTATCCCAACTCTCTaGAGCAGAGCTTCAACTACA +
Preference number: 2 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYIIPTL*SRASTT
Trigger: TGTAGTTGAAGCTCTGCTGCAGAGAGTTGGGATAAT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCTATCTGAGAGACTGTaGCAGAAGATGAGAACAGAA +
Preference number: 2 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYLSERL*QKMRTE
Trigger: TTCTGTTCTCATCTTCTGCCACAGTCTCTCAGATAG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATAAGATGAGAACAGAATaGCATACTGAAAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYKMRTE*HTERAK
Trigger: TTTGGCTCTTTCAGTATGTCATTCTGTTCTCATCTT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR GCA 72 bp AGCTGTAGGAGCTGGATCTGCAGAAGTGTGCAGGTCTaGTGTGTTCACAGCACTCAGGGAAAGAGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: SCRSWICRSVQV*CVHSTQGKRGG
Trigger: TCCTCCCCTCTTTCCCTGAGTGCTGTGAACACAGCAGACCTGCACACTTCTGCAGATCCAGCTCCTACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR GCA 72 bp GTGCCCCAAGCTGTAGGAGCTGGATCTGCAGAAGTGTaGAGGTCTGCTGTGTTCACAGCACTCAGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: VPQAVGAGSAEV*RSAVFTALRER
Trigger: TCTTTCCCTGAGTGCTGTGAACACAGCAGACCTGCACACTTCTGCAGATCCAGCTCCTACAGCTTGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR GCA 72 bp GTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTaGGCCCCTCGCCCACTCGCCACCTACACTTCATGC +
Preference number: 3 (lower is better)
Translates to: VDLTVPFDFKEV*APRPLATYTSC
Trigger: GCATGAAGTGTAGGTGGCGAGTGGGCGAGGGGCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCACCAAGATGCTACTTaGCCAACATGGCCTAGCGTC +
Preference number: 3 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFHQDAT*PTWPSV
Trigger: GACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACGATTATGGTCATATTaGAAAGCGAACTCAAGCACA +
Preference number: 3 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSARLWSY*KANSST
Trigger: TGTGCTTGAGTTCGCTTTCAAATATGACCATAATCG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAATCACTATCATCTATTaGAATACAGGGCCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAITIIY*NTGPQK
Trigger: CTTCTGAGGCCCTGTATTCAAATAGATGATAGTGAT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAAAATCAGCAGTAGATTaGACTGTACCCTTCGATTTC +
Preference number: 3 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAKSAVD*TVPFDF
Trigger: GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATCACTGTACAGTCTaGCACCCACACGATTATGGT +
Preference number: 3 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFYHCTV*HPHDYG
Trigger: ACCATAATCGTGTGGGTGCAAGACTGTACAGTGATA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 72 bp GAGACTGTGGCAGAAGATGAGAACAGAATGACATACTaGAAGAGCCAAACCCACGCACAGAATGCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: ETVAEDENRMTY*KSQTHAQNASL
Trigger: AAGGGAAGCATTCTGTGCGTGGGTTTGGCTCTTTCAGTATGTCATTCTGTTCTCATCTTCTGCCACAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 72 bp GAAGGAGCACAAAAAGCTGCAGCCCACATTGAAACCTaGCAAACACTCTCCGCCAAAATTAGTAGCAGGAAT +
Preference number: 3 (lower is better)
Translates to: EGAQKAAAHIET*QTLSAKISSRN
Trigger: ATTCCTGCTACTAATTTTGGCGGAGAGTGTTTGCCAGGTTTCAATGTGGGCTGCAGCTTTTTGTGCTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTCACCAAGATGCTACTTaGCCAACATGGCCTAGCGTC +
Preference number: 3 (lower is better)
Translates to: TWPEVKATYEVVQVNYACHQDAT*PTWPSV
Trigger: GACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTG...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 72 bp AGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATaGCCTAGCGTCTGTCTTAGTTCGTTTTCCCTTCAT +
Preference number: 3 (lower is better)
Translates to: SHLSHQDATLPT*PSVCLSSFSLH
Trigger: ATGAAGGGAAAACGAACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 72 bp GAGGGTGCACGTTCGGAGAAGTCTGTATGTGTTTCATaGCATATTCTGCCACAGCAACAAAACAACCAAATC +
Preference number: 3 (lower is better)
Translates to: EGARSEKSVCVS*HILPQQQNNQI
Trigger: GATTTGGTTGTTTTGTTGCTGTGGCAGAATATGCCATGAAACACATACAGACTTCTCCGAACGTGCACCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR-3UTR CAA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCTATCACTGTACAGTCTaGCACCCACACGATTATGGT +
Preference number: 3 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRYHCTV*HPHDYG
Trigger: ACCATAATCGTGTGGGTGCAAGACTGTACAGTGATA...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 72 bp GTACAGTTTATAATACTGTCTGACCTGACACGTGGTTaGAATTCTAAGCCTCATAAGGGACTAGGAGTGAAC +
Preference number: 3 (lower is better)
Translates to: VQFIILSDLTRG*NSKPHKGLGVN
Trigger: GTTCACTCCTAGTCCCTTATGAGGCTTAGAATTTCAACCACGTGTCAGGTCAGACAGTATTATAAACTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR GCA 72 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTaGCAACATGGCCTAGCGTCTGTCTTAGTTCGTTTT +
Preference number: 3 (lower is better)
Translates to: IYKVTLVTKMLL*QHGLASVLVRF
Trigger: AAAACGAACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR GCA 72 bp GTTCGGAGAAGTCTGTATGTGTTTCATGGCATATTCTaGCACAGCAACAAAACAACCAAATCAGCAGTAGAT +
Preference number: 3 (lower is better)
Translates to: VRRSLYVFHGIF*HSNKTTKSAVD
Trigger: ATCTACTGCTGATTTGGTTGTTTTGTTGCTGTGGCAGAATATGCCATGAAACACATACAGACTTCTCCGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CCA 72 bp ACTATCATCTATTTGAATACAGGGCCTCAGAAGAGGTaGGCTGGTATGGGTACAAACAGCGTATTTTATAAC +
Preference number: 3 (lower is better)
Translates to: TIIYLNTGPQKR*AGMGTNSVFYN
Trigger: GTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAAATAGATGATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 72 bp TGTACAGTCTTGCACCCACACGATTATGGTCATATTTaGAAGCGAACTCAAGCACAAACACTGAATCCAAAA +
Preference number: 3 (lower is better)
Translates to: CTVLHPHDYGHI*KRTQAQTLNPK
Trigger: TTTTGGATTCAGTGTTTGTGCTTGAGTTCGCTTTCAAATATGACCATAATCGTGTGGGTGCAAGACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR TCA 72 bp TCTCATATGCCTGAGAGCTTTGTGCTTGAGGAAGTATaGCTTAGAGGTAGCTCTGGTTCTGGTAATTTATAT +
Preference number: 3 (lower is better)
Translates to: SHMPESFVLEEV*LRGSSGSGNLY
Trigger: ATATAAATTACCAGAACCAGAGCTACCTCTAAGTCATACTTCCTCAAGCACAAAGCTCTCAGGCATATGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR GCA 72 bp ATGCTTTACCTCTACATATGTATCACTGTACAGTCTTaGACCCACACGATTATGGTCATATTTGAAAGCGAA +
Preference number: 3 (lower is better)
Translates to: MLYLYICITVQS*THTIMVIFESE
Trigger: TTCGCTTTCAAATATGACCATAATCGTGTGGGTGCAAGACTGTACAGTGATACATATGTAGAGGTAAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACACGCTCCCACCCGGCCTaGTCCGACGGGTCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITRSHPA*SDGSER
Trigger: CCGCTCGGACCCGTCGGATCAGGCCGGGTGGGAGCG...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGGGCGGCGGCCACTCTaGGAGAGAGAAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITGRRPL*EREAAG
Trigger: GCCGGCCGCTTCTCTCTCCCAGAGTGGCCGCCGCCC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCACACAGCCTCGGCCTaGAGCGCGCGCCGACGCCGA +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFHTASA*SARRRR
Trigger: TCGGCGTCGGCGCGCGCTCCAGGCCGAGGCTGTGTG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGCGCTCCCACCCGGCCTaGTCCGACGGGTCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLARSHPA*SDGSER
Trigger: CCGCTCGGACCCGTCGGATCAGGCCGGGTGGGAGCG...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAGATTTCAAAGAAGTCTaGGCCCCTCGCCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSADFKEV*APRPLA
Trigger: GGCGAGTGGGCGAGGGGCGCAGACTTCTTTGAAATC...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTCCGGGAGCGGCACCTaGCCGCAAGCTCGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLASGSGT*PQARSH
Trigger: GTGGGAGCGAGCTTGCGGGCAGGTGCCGCTCCCGGA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATGTAGGAGCTGGATCTaGAGAAGTGTGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSACRSWI*RSVQVC
Trigger: GCAGACCTGCACACTTCTGCAGATCCAGCTCCTACA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCGGGCGGCGGCCACTCTaGGAGAGAGAAGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRGRRPL*EREAAG
Trigger: GCCGGCCGCTTCTCTCTCCCAGAGTGGCCGCCGCCC...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAAGGTTCAGTGGGCTGTaGAACTACAGTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSARFSGL*NYSNFR
Trigger: CCTGAAGTTACTGTAGTTTCACAGCCCACTGAACCT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATGCTTCCCTTTGTTATaGTCCGGTGGAATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSACFPLL*SGGMQA
Trigger: AGCTTGCATTCCACCGGATCATAACAAAGGGAAGCA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAAAGTTTCTCTTCCCTaGTCTCCCGCGCGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPKVSLP*SPARAR
Trigger: CCGGGCTCGCGCGGGAGAGCAGGGAAGAGAAACTTT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACCTCGTGTTTTTAGCTaGTACTCCAAAATCCGCCAA +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAPRVFS*YSKIRQ
Trigger: TTGGCGGATTTTGGAGTATCAGCTAAAAACACGAGG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAGGATGCTGCAGCAGCTaGGATGTAGTCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPGCCSS*DVVHLA
Trigger: TGCCAGGTGGACTACATCTCAGCTGCTGCAGCATCC...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGGATGCTGCAGCAGCTaGGATGTAGTCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITGCCSS*DVVHLA
Trigger: TGCCAGGTGGACTACATCTCAGCTGCTGCAGCATCC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAGACCTGACACGTGGTTaGAATTCTAAGCCTCATAAG +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSADLTRG*NSKPHK
Trigger: CTTATGAGGCTTAGAATTTCAACCACGTGTCAGGTC...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACTGAGCCTCTCTCCTTaGGTCAATAATCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSALSLSP*VNNLNV
Trigger: GACATTCAGATTATTGACTCAAGGAGAGAGGCTCAG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACATCACAGCATCTACTaGTCCACCTGCACAAAATTC +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAHHSIY*STCTKF
Trigger: GAATTTTGTGCAGGTGGAGCAGTAGATGCTGTGATG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAGCTAACTCTGCCTTCTaGTGCTGGATGATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAANSAF*CWMIFF
Trigger: GAAAAAGATCATCCAGCAGCAGAAGGCAGAGTTAGC...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACTGGTCTCTTTATTCTaGGCCTTGTACACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSALVSLF*ALYTFP
Trigger: TGGGAAAGTGTACAAGGCCCAGAATAAAGAGACCAG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAATGTCCACAGTTTCTTaGTCTTCTGTGTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAMSTVS*SSVSGR
Trigger: TCTGCCTGACACAGAAGACCAAGAAACTGTGGACAT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAGCAATTCGCACTGTATaGTTGTTGACAGGACTAGGA +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAAIRTV*LLTGLG
Trigger: TCCTAGTCCTGTCAACAACCATACAGTGCGAATTGC...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATTCCGGGAGCGGCACCTaGCCGCAAGCTCGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYSGSGT*PQARSH
Trigger: GTGGGAGCGAGCTTGCGGGCAGGTGCCGCTCCCGGA...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATGCCTGAGAGCTTTGTaGTTGAGGAAGTATGACTTA +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSACLRAL*LRKYDL
Trigger: TAAGTCATACTTCCTCAAGCACAAAGCTCTCAGGCA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAATGAACTCATTACACTaGAAACCAGAGAAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAMNSLH*KPEKEH
Trigger: GTGCTCCTTCTCTGGTTTGCAGTGTAATGAGTTCAT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAGGGCCTCAGAAGAGGTaGGCTGGTATGGGTACAAAC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPGPQKR*AGMGTN
Trigger: GTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCC...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAAAGAGGGGAGGAGGTaGCTGATGAGGGTGCACGTT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPKEGRR*LMRVHV
Trigger: AACGTGCACCCTCATCAGCCACCTCCTCCCCTCTTT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACTTTTCTCAGCTCTTTaGGTGCTTTCTCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSALFSAL*VLSPLH
Trigger: ATGAAGTGGAGAAAGCACCCAAAGAGCTGAGAAAAG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAAAAGTCCTTAAAATTTaGAGACCATCTGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAKVLKI*RPSGWL
Trigger: CAGCCATCCAGATGGTCTTCAAATTTTAAGGACTTT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTTGGCTTCACTGCGCTaGATCTTGGGCAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFLASLR*ILGSLA
Trigger: AGCAAGACTGCCCAAGATTCAGCGCAGTGAAGCCAA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTAGCTGCAGCCCACATTaGAACCTGGCAAACACTCTC +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFSCSPH*NLANTL
Trigger: GAGAGTGTTTGCCAGGTTTCAATGTGGGCTGCAGCT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAGCTGCAGCCCACATTaGAACCTGGCAAACACTCTC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPSCSPH*NLANTL
Trigger: GAGAGTGTTTGCCAGGTTTCAATGTGGGCTGCAGCT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACATGTGTCAATCCCATaGTTGAAAAGACATGTTGCT +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAHVSIP*LKRHVA
Trigger: AGCAACATGTCTTTTCAATCATGGGATTGACACATG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCAAAGTTTCTCTTCCCTaGTCTCCCGCGCGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRKVSLP*SPARAR
Trigger: CCGGGCTCGCGCGGGAGAGCAGGGAAGAGAAACTTT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATTACTCATCATTTCCTaGTCAAAGCGCCGGAAAATT +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSALLIIS*SKRRKI
Trigger: AATTTTCCGGCGCTTTGAGCAGGAAATGATGAGTAA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTGTAGGAGCTGGATCTaGAGAAGTGTGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFCRSWI*RSVQVC
Trigger: GCAGACCTGCACACTTCTGCAGATCCAGCTCCTACA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAAGCATGCTGGCTTTGTaGAAGCTCCTCTTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITSMLAL*KLLFPA
Trigger: CGCAGGAAAGAGGAGCTTGCACAAAGCCAGCATGCT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS-3UTR CCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATGGATTCTCAGATTCTaGTGGCAGAATAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAWILRF*WQNSFS
Trigger: ACTGAAACTATTCTGCCACCAGAATCTGAGAATCCA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTGGTATTAGAACAGGCTaGGGTTCAGTGGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFGIRTG*GSVGCE
Trigger: TTCACAGCCCACTGAACCTCAGCCTGTTCTAATACC...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACATCTAAAGTCTGCTTaGAAACTACTTGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAHLKSA*KLLVFG
Trigger: CCCAAATACAAGTAGTTTGCAAGCAGACTTTAGATG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTTCAGCCTTCGCCTCTaGAATCAATTCTCGGATGGG +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFFSLRL*NQFSDG
Trigger: CCCATCCGAGAATTGATTGCAGAGGCGAAGGCTGAA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCACTGAGCCACATCTGCTaGCTCACATGTTCCTATCAC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPLSHIC*LTCSYH
Trigger: GTGATAGGAACATGTGAGGCAGCAGATGTGGCTCAG...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCGATTTCAAAGAAGTCTaGGCCCCTCGCCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRDFKEV*APRPLA
Trigger: GGCGAGTGGGCGAGGGGCGCAGACTTCTTTGAAATC...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGGATCTGCAGAAGTGTaGAGGTCTGCTGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITGSAEV*RSAVFT
Trigger: TGTGAACACAGCAGACCTGCACACTTCTGCAGATCC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCATGGCCATTCGAGTCTTaGCTTCACTGCGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPWPFES*LHCAES
Trigger: AGATTCAGCGCAGTGAAGCCAAGACTCGAATGGCCA...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACATCAGAAGAGGTGGGCTaGTATGGGTACAAACAGCGT +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITSEEVG*YGYKQR
Trigger: ACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGA...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGGGGCCTCAGAAGAGGTaGGCTGGTATGGGTACAAAC +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAGPQKR*AGMGTN
Trigger: GTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCC...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGAAAGAGGGGAGGAGGTaGCTGATGAGGGTGCACGTT +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAKEGRR*LMRVHV
Trigger: AACGTGCACCCTCATCAGCCACCTCCTCCCCTCTTT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATACTTGGACAGAATTTaGCTTCTCAGAAGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAYLDRI*LLRRVF
Trigger: AAAGACTCTTCTGAGAAGCCAAATTCTGTCCAAGTA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTGCCCACATTGAAACCTaGCAAACACTCTCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFAHIET*QTLSAK
Trigger: TTTGGCGGAGAGTGTTTGCCAGGTTTCAATGTGGGC...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAAGGTTCAGTGGGCTGTaGAACTACAGTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITRFSGL*NYSNFR
Trigger: CCTGAAGTTACTGTAGTTTCACAGCCCACTGAACCT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTTGGCTTCACTGCGCTaGATCTTGGGCAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLALASLR*ILGSLA
Trigger: AGCAAGACTGCCCAAGATTCAGCGCAGTGAAGCCAA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTATTTTATCACGGTCCTaGTCTGGTGTGGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFILSRS*SGVAVE
Trigger: CTCAACAGCCACACCAGATCAGGACCGTGATAAAAT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGTGCTTGAGGAAGTATaGCTTAGAGGTAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITVLEEV*LRGSSG
Trigger: ACCAGAGCTACCTCTAAGTCATACTTCCTCAAGCAC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAACCAAGATGCTACTTTaGCAACATGGCCTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITTKMLL*QHGLAS
Trigger: AGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTAAGGTGGGTCTCATATaGCTGAGAGCTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFKVGLI*LRALCL
Trigger: CAAGCACAAAGCTCTCAGGCATATGAGACCCACCTT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGCTACTTTGCCAACATaGCCTAGCGTCTGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITATLPT*PSVCLS
Trigger: ACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAATTCCCGAAGTTCCTaGCGTCTAAGAAACCGCAAT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPNSRSS*RLRNRN
Trigger: ATTGCGGTTTCTTAGACGTCAGGAACTTCGGGAATT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACATCTCTTGTTCTCCTTTaGTGCGTTTGGCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITSLVLL*CVWLHL
Trigger: GAGATGAAGCCAAACGCATCAAAGGAGAACAAGAGA...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCACTTCTCGAGCTCTCATaGGCTGTTGCTTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPLLELS*AVACYS
Trigger: TGAATAACAAGCAACAGCTCATGAGAGCTCGAGAAG...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTAAGGAGAAAGTGGTATaGAGACGTTCCTTCCCAATC +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFKEKVV*RRSFPI
Trigger: GATTGGGAAGGAACGTCTTCATACCACTTTCTCCTT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCTGAGCCTCTCTCCTTaGGTCAATAATCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFLSLSP*VNNLNV
Trigger: GACATTCAGATTATTGACTCAAGGAGAGAGGCTCAG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCCAACCATTCCACTCTaGGCCTCTCTCCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRPTIPL*ASLLES
Trigger: TGACTCAAGGAGAGAGGCTCAGAGTGGAATGGTTGG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCACTTTCCTGCGTTTCATaGGCTCTTTTCTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPLSCVS*ALFSAL
Trigger: AAGAGCTGAGAAAAGAGCTCATGAAACGCAGGAAAG...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS-3UTR GCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACATTCACGTGTTCGTACTaGTTCTTCTTCTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITFTCSY*FFFFSL
Trigger: GAGCGAGAAGAAGAAGAAGCAGTACGAACACGTGAA...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCACATCACAGCATCTACTaGTCCACCTGCACAAAATTC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPHHSIY*STCTKF
Trigger: GAATTTTGTGCAGGTGGAGCAGTAGATGCTGTGATG...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCGCAAGCGATTTGTGTaGTCTTGTTCCAGGCGTTCG +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRRKRFV*SCSRRS
Trigger: CGAACGCCTGGAACAAGAGCACACAAATCGCTTGCG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAGCTAACTCTGCCTTCTaGTGCTGGATGATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPANSAF*CWMIFF
Trigger: GAAAAAGATCATCCAGCAGCAGAAGGCAGAGTTAGC...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGAGAAGTGTGCAGGTCTaGTGTGTTCACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLARSVQV*CVHSTQ
Trigger: CTGAGTGCTGTGAACACAGCAGACCTGCACACTTCT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCAGCAGCTAAAACACTaGTCTCTTTATTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFQQLKH*SLYSGP
Trigger: AGGCCCAGAATAAAGAGACCAGTGTTTTAGCTGCTG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAATGTCCACAGTTTCTTaGTCTTCTGTGTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITMSTVS*SSVSGR
Trigger: TCTGCCTGACACAGAAGACCAAGAAACTGTGGACAT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGTTCCTGTAGTTTCCTaGCAAACTCTTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITVPVVS*QTLLPV
Trigger: CACTGGAAGAAGAGTTTGCCAGGAAACTACAGGAAC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAGAGGTGGGCTGGTATaGGTACAAACAGCGTATTTT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPRGGLV*VQTAYF
Trigger: AAAATACGCTGTTTGTACCCATACCAGCCCACCTCT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 72 bp CCCTTCATTAAGGTGGGTCTCATATGCCTGAGAGCTTaGTGCTTGAGGAAGTATGACTTAGAGGTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PFIKVGLICLRA*CLRKYDLEVAL
Trigger: CAGAGCTACCTCTAAGTCATACTTCCTCAAGCACAAAGCTCTCAGGCATATGAGACCCACCTTAATGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAACTTTAGAAGCATCCTaGACTTCACTTCCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITTLEAS*TSLPKA
Trigger: GGCTTTAGGAAGTGAAGTTCAGGATGCTTCTAAAGT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGCCTTCTGCTGCTGGATaGTCTTTTTCAGAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAPSAAG*SFSESH
Trigger: ATGGCTCTCTGAAAAAGATCATCCAGCAGCAGAAGG...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCATGGCGCTTAAGTAGCTaGTGTCTTTGCATGAAATAC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPWRLSS*CLCMKY
Trigger: GTATTTCATGCAAAGACATCAGCTACTTAAGCGCCA...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTTTTCATTCTGCAGCTaGTGCAGTTCGCGGACATTG +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAFSFCS*CSSRTL
Trigger: CAATGTCCGCGAACTGCATCAGCTGCAGAATGAAAA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGAATCCGGCTCTGTGTTaGTGGGTTAAGGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLANPALC*WVKAFR
Trigger: TCTGAATGCCTTAACCCATCAACACAGAGCCGGATT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTGCTTCCCTTTGTTATaGTCCGGTGGAATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLACFPLL*SGGMQA
Trigger: AGCTTGCATTCCACCGGATCATAACAAAGGGAAGCA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCCAACCATTCCACTCTaGGCCTCTCTCCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFPTIPL*ASLLES
Trigger: TGACTCAAGGAGAGAGGCTCAGAGTGGAATGGTTGG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAGATGCACGCTTACTTaGAGGTATTGGCAGAGAATT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPRCTLT*RYWQRI
Trigger: AATTCTCTGCCAATACCTGCAAGTAAGCGTGCATCT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCTGAGCCACATCTGCTaGCTCACATGTTCCTATCAC +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRLSHIC*LTCSYH
Trigger: GTGATAGGAACATGTGAGGCAGCAGATGTGGCTCAG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTGAGTCTTGGCTTCACTaGGCTGAATCTTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACESWLH*AESWAV
Trigger: GACTGCCCAAGATTCAGCGCAGTGAAGCCAAGACTC...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTGCCTGAGAGCTTTGTaGTTGAGGAAGTATGACTTA +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFCLRAL*LRKYDL
Trigger: TAAGTCATACTTCCTCAAGCACAAAGCTCTCAGGCA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAGCAGATTTTCAAGCTTaGGCCTCTTCTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPADFQA*ASSLFH
Trigger: ATGAAAGAGAGAAGAGGCCCAAGCTTGAAAATCTGC...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACACTATTGAGCTGTTGTTaGGCTCTTTGCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITLLSCC*ALCSSF
Trigger: GAAAGAAGAGCAAAGAGCCCAACAACAGCTCAATAG...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCTGGCCATTCGAGTCTTaGCTTCACTGCGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRWPFES*LHCAES
Trigger: AGATTCAGCGCAGTGAAGCCAAGACTCGAATGGCCA...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCGCAGTTCGCGGACATTaGCTTCACACTGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRAVRGH*LHTATE
Trigger: TTCAGTTGCAGTGTGAAGCCAATGTCCGCGAACTGC...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACACTATCTGAGAGACTGTaGCAGAAGATGAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITLSERL*QKMRTE
Trigger: TTCTGTTCTCATCTTCTGCCACAGTCTCTCAGATAG...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCTATCTGAGAGACTGTaGCAGAAGATGAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFLSERL*QKMRTE
Trigger: TTCTGTTCTCATCTTCTGCCACAGTCTCTCAGATAG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCCAAGCTGTAGGAGCTaGATCTGCAGAAGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFPSCRS*ICRSVQ
Trigger: CTGCACACTTCTGCAGATCCAGCTCCTACAGCTTGG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCGCCCACATTGAAACCTaGCAAACACTCTCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRAHIET*QTLSAK
Trigger: TTTGGCGGAGAGTGTTTGCCAGGTTTCAATGTGGGC...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 72 bp AAACCAGAGAAGGAGCACAAAAAGCTGCAGCCCACATaGAAACCTGGCAAACACTCTCCGCCAAAATTAGTA +
Preference number: 4 (lower is better)
Translates to: KPEKEHKKLQPT*KPGKHSPPKLV
Trigger: TACTAATTTTGGCGGAGAGTGTTTGCCAGGTTTCAATGTGGGCTGCAGCTTTTTGTGCTCCTTCTCTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCTCTTTCATTCTCCTTaGTTACTGCTGTTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFLFHSP*LLLFCH
Trigger: ATGACAGAACAGCAGTAATCAAGGAGAATGAAAGAG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTGGTATTAGAACAGGCTaGGGTTCAGTGGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACGIRTG*GSVGCE
Trigger: TTCACAGCCCACTGAACCTCAGCCTGTTCTAATACC...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTCTCTTGTTCTCCTTTaGTGCGTTTGGCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLASLVLL*CVWLHL
Trigger: GAGATGAAGCCAAACGCATCAAAGGAGAACAAGAGA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGGACTGTGGCAGAAGATaGGAACAGAATGACATACTG +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLADCGRR*EQNDIL
Trigger: CAGTATGTCATTCTGTTCTCATCTTCTGCCACAGTC...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCAGCCTGCAGGCCTCTaGCAGAGTTTTAAACAGAAT +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRQPAGL*QSFKQN
Trigger: ATTCTGTTTAAAACTCTGTCAGAGGCCTGCAGGCTG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGTTTATAATACTGTCTaGCCTGACACGTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITVYNTV*PDTWLK
Trigger: TTTCAACCACGTGTCAGGTCAGACAGTATTATAAAC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAGTTTATAATACTGTCTaGCCTGACACGTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPVYNTV*PDTWLK
Trigger: TTTCAACCACGTGTCAGGTCAGACAGTATTATAAAC...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTCACTATCATCTATTTaGATACAGGGCCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFSLSSI*IQGLRR
Trigger: TCTTCTGAGGCCCTGTATTCAAATAGATGATAGTGA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCATGTGTCAATCCCATaGTTGAAAAGACATGTTGCT +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFHVSIP*LKRHVA
Trigger: AGCAACATGTCTTTTCAATCATGGGATTGACACATG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAATCTACTGCTCCACCTaGACAAAATTCAATGAGGAT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPIYCST*TKFNED
Trigger: ATCCTCATTGAATTTTGTGCAGGTGGAGCAGTAGAT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCTTCAGCCTTCGCCTCTaGAATCAATTCTCGGATGGG +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFFSLRL*NQFSDG
Trigger: CCCATCCGAGAATTGATTGCAGAGGCGAAGGCTGAA...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCACCAAGATGCTACTTTaGCAACATGGCCTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRTKMLL*QHGLAS
Trigger: AGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGATCACTGTACAGTCTTaGACCCACACGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAITVQS*THTIMV
Trigger: GACCATAATCGTGTGGGTGCAAGACTGTACAGTGAT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAGAAGTGTGCAGGTCTaGTGTGTTCACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACRSVQV*CVHSTQ
Trigger: CTGAGTGCTGTGAACACAGCAGACCTGCACACTTCT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGGATCTGCAGAAGTGTaGAGGTCTGCTGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFGSAEV*RSAVFT
Trigger: TGTGAACACAGCAGACCTGCACACTTCTGCAGATCC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTCTCAGCTCTTTGGGTaGTTTCTCCACTTCATTTAT +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFSQLFG*FLHFIY
Trigger: ATAAATGAAGTGGAGAAAGCACCCAAAGAGCTGAGA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGCAGCAGCTAAAACACTaGTCTCTTTATTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAQQLKH*SLYSGP
Trigger: AGGCCCAGAATAAAGAGACCAGTGTTTTAGCTGCTG...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGCTTCCTAAAGCCTTTTaGTCAGTATCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLALPKAF*SVSATT
Trigger: TGTGGTGGCTGATACTGACCAAAAGGCTTTAGGAAG...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTGGATTCTCAGATTCTaGTGGCAGAATAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFWILRF*WQNSFS
Trigger: ACTGAAACTATTCTGCCACCAGAATCTGAGAATCCA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCATGCTGTTTGAGCAGCTaGTGTTTTTCTTGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPCCLSS*CFSCKC
Trigger: ACACTTACAAGAAAAACACCAGCTGCTCAAACAGCA...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTGCTGTTTGAGCAGCTaGTGTTTTTCTTGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFCCLSS*CFSCKC
Trigger: ACACTTACAAGAAAAACACCAGCTGCTCAAACAGCA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGCAGTTCGCGGACATTaGCTTCACACTGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFAVRGH*LHTATE
Trigger: TTCAGTTGCAGTGTGAAGCCAATGTCCGCGAACTGC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGGTTCCTGTAGTTTCCTaGCAAACTCTTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAVPVVS*QTLLPV
Trigger: CACTGGAAGAAGAGTTTGCCAGGAAACTACAGGAAC...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCGCTACTTTGCCAACATaGCCTAGCGTCTGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRATLPT*PSVCLS
Trigger: ACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGC...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCTCAGAAGAGGTGGGCTaGTATGGGTACAAACAGCGT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFSEEVG*YGYKQR
Trigger: ACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGA...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGGCAATTCGCACTGTATaGTTGTTGACAGGACTAGGA +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAAIRTV*LLTGLG
Trigger: TCCTAGTCCTGTCAACAACCATACAGTGCGAATTGC...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 72 bp TGCCACAGCAACAAAACAACCAAATCAGCAGTAGATTaGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: CHSNKTTKSAVD*TVPFDFKEVCA
Trigger: GGCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCTGATCACATCTTTTTaGGTTTTGTCGTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRLITSF*VLSSSP
Trigger: GGGGGAAGACGACAAAACTCAAAAAGATGTGATCAG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCCTTCTGCTGCTGGATaGTCTTTTTCAGAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFPSAAG*SFSESH
Trigger: ATGGCTCTCTGAAAAAGATCATCCAGCAGCAGAAGG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCATTTTATCACGGTCCTaGTCTGGTGTGGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFILSRS*SGVAVE
Trigger: CTCAACAGCCACACCAGATCAGGACCGTGATAAAAT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTTTTTCATTCTGCAGCTaGTGCAGTTCGCGGACATTG +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACFSFCS*CSSRTL
Trigger: CAATGTCCGCGAACTGCATCAGCTGCAGAATGAAAA...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAATCCGGCTCTGTGTTaGTGGGTTAAGGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACNPALC*WVKAFR
Trigger: TCTGAATGCCTTAACCCATCAACACAGAGCCGGATT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCAACAGAATGACATACTaGAAGAGCCAAACCCACGCA +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRNRMTY*KSQTHA
Trigger: TGCGTGGGTTTGGCTCTTTCAGTATGTCATTCTGTT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCGACTGTGGCAGAAGATaGGAACAGAATGACATACTG +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRDCGRR*EQNDIL
Trigger: CAGTATGTCATTCTGTTCTCATCTTCTGCCACAGTC...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTCAGCCTGCAGGCCTCTaGCAGAGTTTTAAACAGAAT +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACQPAGL*QSFKQN
Trigger: ATTCTGTTTAAAACTCTGTCAGAGGCCTGCAGGCTG...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAATCATCTAAATCACTaGCAAACAAGGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPNHLNH*QTRFSI
Trigger: GATGCTGAACCTTGTTTGTCAGTGATTTAGATGATT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGTGCTTGAGGAAGTATaGCTTAGAGGTAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFVLEEV*LRGSSG
Trigger: ACCAGAGCTACCTCTAAGTCATACTTCCTCAAGCAC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACACATCTAAAGTCTGCTTaGAAACTACTTGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITHLKSA*KLLVFG
Trigger: CCCAAATACAAGTAGTTTGCAAGCAGACTTTAGATG...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAATTTGTTCTCGTTGTTaGTGTAGTTTGCTATTGAGC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPICSRC*CSLLLS
Trigger: GCTCAATAGCAAACTACAGCAACAACGAGAACAAAT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCGCAAGCGATTTGTGTaGTCTTGTTCCAGGCGTTCG +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYRKRFV*SCSRRS
Trigger: CGAACGCCTGGAACAAGAGCACACAAATCGCTTGCG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGAGTCTTGGCTTCACTaGGCTGAATCTTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYESWLH*AESWAV
Trigger: GACTGCCCAAGATTCAGCGCAGTGAAGCCAAGACTC...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGATTATCCCAACTCTCTaGAGCAGAGCTTCAACTACA +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAIIPTL*SRASTT
Trigger: TGTAGTTGAAGCTCTGCTGCAGAGAGTTGGGATAAT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTGCTCAACCAACAAGTaGCATTTTTCATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLACSTNK*HFSFCS
Trigger: GCTGCAGAATGAAAAATGCCACTTGTTGGTTGAGCA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCCAAGCTGTAGGAGCTaGATCTGCAGAAGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYPSCRS*ICRSVQ
Trigger: CTGCACACTTCTGCAGATCCAGCTCCTACAGCTTGG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAAGCACAGTGTGGAATaGGAAAAAGTGTATAGTTAC +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPKHSVE*EKVYSY
Trigger: GTAACTATACACTTTTTCCCATTCCACACTGTGCTT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCCTCGTGTTTTTAGCTaGTACTCCAAAATCCGCCAA +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFPRVFS*YSKIRQ
Trigger: TTGGCGGATTTTGGAGTATCAGCTAAAAACACGAGG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTCTGATCACATCTTTTTaGGTTTTGTCGTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACLITSF*VLSSSP
Trigger: GGGGGAAGACGACAAAACTCAAAAAGATGTGATCAG...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCTTCCTGGTTCCTCATTaGTGTCCATTATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRFLVPH*CPLCSL
Trigger: CAGAGAACATAATGGACATCAATGAGGAACCAGGAA...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGCTGTAGTTTGCTATTaGGCTGTTGTTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFAVVCY*AVVGLF
Trigger: AAAGAGCCCAACAACAGCTCAATAGCAAACTACAGC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCTCTTGCTGTTGTTTCTaGACAAACTCTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRSCCCF*TNSCSS
Trigger: GGAGGAACAAGAGTTTGTTCAGAAACAACAGCAAGA...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335753.8
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAACAGAATGACATACTaGAAGAGCCAAACCCACGCA +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACNRMTY*KSQTHA
Trigger: TGCGTGGGTTTGGCTCTTTCAGTATGTCATTCTGTT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTGACCTGACACGTGGTTaGAATTCTAAGCCTCATAAG +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACDLTRG*NSKPHK
Trigger: CTTATGAGGCTTAGAATTTCAACCACGTGTCAGGTC...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCAGATGCACGCTTACTTaGAGGTATTGGCAGAGAATT +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRRCTLT*RYWQRI
Trigger: AATTCTCTGCCAATACCTGCAAGTAAGCGTGCATCT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGATTCTCCTTGATTACTaGTGTTCTGTCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAILLDY*CSVMEF
Trigger: GAACTCCATGACAGAACAGCAGTAATCAAGGAGAAT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGCTCTCATGAGCTGTTaGTTGTTATTCAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFALMSC*LLFRHS
Trigger: AGAGTGCCTGAATAACAAGCAACAGCTCATGAGAGC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTATCACTGTACAGTCTTaGACCCACACGATTATGGTC +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACITVQS*THTIMV
Trigger: GACCATAATCGTGTGGGTGCAAGACTGTACAGTGAT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAATTGAAAAGACATGTTaGTCTCAAGTAGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPIEKTC*SQVDKR
Trigger: CCTCTTATCTACTTGAGAGCAACATGTCTTTTCAAT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGCAATCAATTCTCGGATaGGTTTGTTGGAATCAACAG +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAQSILG*VCWNQQ
Trigger: CTGTTGATTCCAACAAACCCATCCGAGAATTGATTG...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCACTGCTGTTCTGTCATaGAGTTCAGTCATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRTAVLS*SSVIAS
Trigger: AGAAGCAATGACTGAACTCCATGACAGAACAGCAGT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCTCCCCCAATTTCTCTTaGGTGTCTTCCTTTGTAAGC +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFSPNFS*VSSFVS
Trigger: GCTTACAAAGGAAGACACCCAAGAGAAATTGGGGGA...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCTTCCTAAAGCCTTTTaGTCAGTATCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFLPKAF*SVSATT
Trigger: TGTGGTGGCTGATACTGACCAAAAGGCTTTAGGAAG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAATTCTCAGATTCTGGTaGCAGAATAGTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITILRFW*QNSFSF
Trigger: AAAACTGAAACTATTCTGCCACCAGAATCTGAGAAT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTTTCAAAGGAGAAAGTaGTATGAAGACGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAFQRRK*YEDVPS
Trigger: GGAAGGAACGTCTTCATACCACTTTCTCCTTTGAAA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAGAGGTGGGCTGGTATaGGTACAAACAGCGTATTTT +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACRGGLV*VQTAYF
Trigger: AAAATACGCTGTTTGTACCCATACCAGCCCACCTCT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 72 bp AATATACAAAGTCACCTTAGTCACCAAGATGCTACTTaGCCAACATGGCCTAGCGTCTGTCTTAGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: NIQSHLSHQDAT*PTWPSVCLSSF
Trigger: AAACGAACTAAGACAGACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
3UTR CAA 72 bp CTGTACAGTCTTGCACCCACACGATTATGGTCATATTaGAAAGCGAACTCAAGCACAAACACTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LYSLAPTRLWSY*KANSSTNTESK
Trigger: TTTGGATTCAGTGTTTGTGCTTGAGTTCGCTTTCAAATATGACCATAATCGTGTGGGTGCAAGACTGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCTCTTTCATTCTCCTTaGTTACTGCTGTTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRLFHSP*LLLFCH
Trigger: ATGACAGAACAGCAGTAATCAAGGAGAATGAAAGAG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTCACTATCAACTGCCTaGATATTTGCCTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLASLSTA*IFASFS
Trigger: AGAAAAAGAGGCAAATATTCAGGCAGTTGATAGTGA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGAAGATGAGAACAGAATaGCATACTGAAAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAKMRTE*HTERAK
Trigger: TTTGGCTCTTTCAGTATGTCATTCTGTTCTCATCTT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGGATTATGGTCATATTTaGAAGCGAACTCAAGCACAA +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLADYGHI*KRTQAQ
Trigger: TTGTGCTTGAGTTCGCTTTCAAATATGACCATAATC...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCAAAAATAGTCACTTCTaGAACTCGCTGATGCTCAAG +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRKNSHF*NSLMLK
Trigger: CTTGAGCATCAGCGAGTTTCAGAAGTGACTATTTTT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTACTAAGGTCAGAAGATaGACGCTTACTTGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACTKVRR*TLTCRY
Trigger: ATACCTGCAAGTAAGCGTGCATCTTCTGACCTTAGT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAACTCTGCCTTCTGCTaGTGGATGATCTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACNSAFC*WMIFFR
Trigger: TCTGAAAAAGATCATCCAGCAGCAGAAGGCAGAGTT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATTTCGAGCTCCCAAATTaGAGCTTCTCGAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYFELPN*SFSSSH
Trigger: ATGAGAGCTCGAGAAGCTGCAATTTGGGAGCTCGAA...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATAAGGTGGGTCTCATATaGCTGAGAGCTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYKVGLI*LRALCL
Trigger: CAAGCACAAAGCTCTCAGGCATATGAGACCCACCTT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCTATTGAGCTGTTGTTaGGCTCTTTGCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFLLSCC*ALCSSF
Trigger: GAAAGAAGAGCAAAGAGCCCAACAACAGCTCAATAG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCCATTTCTATTAAAGTaGTACCCAGGGACCAAACAT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFPFLLK*YPGTKH
Trigger: ATGTTTGGTCCCTGGGTATCACTTTAATAGAAATGG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGTCATTGCTTCTAACTaGGCATCGGTAATATGTTCA +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFVIASN*ASVICS
Trigger: TGAACATATTACCGATGCTCAGTTAGAAGCAATGAC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCTTTTCCTTCACTGACTaGATTAATGTCCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRFSFTD*INVHSF
Trigger: GAAACTGTGGACATTAATTCAGTCAGTGAAGGAAAA...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATAATTCCCGAAGTTCCTaGCGTCTAAGAAACCGCAAT +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYNSRSS*RLRNRN
Trigger: ATTGCGGTTTCTTAGACGTCAGGAACTTCGGGAATT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTGTAGTTTGCTATTaGGCTGTTGTTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYAVVCY*AVVGLF
Trigger: AAAGAGCCCAACAACAGCTCAATAGCAAACTACAGC...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCTTCTCGAGCTCTCATaGGCTGTTGCTTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYLLELS*AVACYS
Trigger: TGAATAACAAGCAACAGCTCATGAGAGCTCGAGAAG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTCTCAAGCACAAACACTaGATCCAAAAGGCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACLKHKH*IQKAVL
Trigger: TAAAACTGCCTTTTGGATTCAGTGTTTGTGCTTGAG...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCTCACTATCATCTATTTaGATACAGGGCCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFSLSSI*IQGLRR
Trigger: TCTTCTGAGGCCCTGTATTCAAATAGATGATAGTGA...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAAATAGTCACTTCTaGAACTCGCTGATGCTCAAG +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFKNSHF*NSLMLK
Trigger: CTTGAGCATCAGCGAGTTTCAGAAGTGACTATTTTT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCATCTACTGCTCCACCTaGACAAAATTCAATGAGGAT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFIYCST*TKFNED
Trigger: ATCCTCATTGAATTTTGTGCAGGTGGAGCAGTAGAT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGAACTTCACTATCAACTaGCTGAATATTTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLANFTIN*LNICLF
Trigger: AAAGAGGCAAATATTCAGGCAGTTGATAGTGAAGTT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCAGCAGTGGAACCAGTaGCTGAATCATTATCATTTT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFQQWNQ*LNHYHF
Trigger: AAAATGATAATGATTCAGGCACTGGTTCCACTGCTG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTCAGCAGTGGAACCAGTaGCTGAATCATTATCATTTT +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACQQWNQ*LNHYHF
Trigger: AAAATGATAATGATTCAGGCACTGGTTCCACTGCTG...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCTTACTCATCATTTCCTaGTCAAAGCGCCGGAAAATT +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFLLIIS*SKRRKI
Trigger: AATTTTCCGGCGCTTTGAGCAGGAAATGATGAGTAA...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTCTCATGAGCTGTTaGTTGTTATTCAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYALMSC*LLFRHS
Trigger: AGAGTGCCTGAATAACAAGCAACAGCTCATGAGAGC...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTTTTCATGGCATATTCTaGCACAGCAACAAAACAACC +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACFHGIF*HSNKTT
Trigger: GGTTGTTTTGTTGCTGTGGCAGAATATGCCATGAAA...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCAAACTACTTGTATTTaGGACTCAGTTAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRQTTCI*DSVNGL
Trigger: GAGACCATTAACTGAGTCCCAAATACAAGTAGTTTG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAGGAGCCATCCAATATaGTGTACCAATAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFRSHPI*CTNKGI
Trigger: GATTCCTTTATTGGTACACCATATTGGATGGCTCCT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTCTCTAGTTAATACTTaGACAGAATTTGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLASLVNT*TEFGFS
Trigger: TGAGAAGCCAAATTCTGTCCAAGTATTAACTAGAGA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATTTCCTGGTTCCTCATTaGTGTCCATTATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYFLVPH*CPLCSL
Trigger: CAGAGAACATAATGGACATCAATGAGGAACCAGGAA...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATACTTTAGAAGCATCCTaGACTTCACTTCCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYTLEAS*TSLPKA
Trigger: GGCTTTAGGAAGTGAAGTTCAGGATGCTTCTAAAGT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATTGGCGCTTAAGTAGCTaGTGTCTTTGCATGAAATAC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYWRLSS*CLCMKY
Trigger: GTATTTCATGCAAAGACATCAGCTACTTAAGCGCCA...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAATCATCTAAATCACTaGCAAACAAGGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACNHLNH*QTRFSI
Trigger: GATGCTGAACCTTGTTTGTCAGTGATTTAGATGATT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTGATTATGGTCATATTTaGAAGCGAACTCAAGCACAA +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACDYGHI*KRTQAQ
Trigger: TTGTGCTTGAGTTCGCTTTCAAATATGACCATAATC...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATACTAAGGTCAGAAGATaGACGCTTACTTGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYTKVRR*TLTCRY
Trigger: ATACCTGCAAGTAAGCGTGCATCTTCTGACCTTAGT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATAACTCTGCCTTCTGCTaGTGGATGATCTTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYNSAFC*WMIFFR
Trigger: TCTGAAAAAGATCATCCAGCAGCAGAAGGCAGAGTT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATACTGCTGTTCTGTCATaGAGTTCAGTCATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYTAVLS*SSVIAS
Trigger: AGAAGCAATGACTGAACTCCATGACAGAACAGCAGT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCAGATTTTCAAGCTTaGGCCTCTTCTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYADFQA*ASSLFH
Trigger: ATGAAAGAGAGAAGAGGCCCAAGCTTGAAAATCTGC...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCATTCTCAGATTCTGGTaGCAGAATAGTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRILRFW*QNSFSF
Trigger: AAAACTGAAACTATTCTGCCACCAGAATCTGAGAAT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAAGCACAGTGTGGAATaGGAAAAAGTGTATAGTTAC +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACKHSVE*EKVYSY
Trigger: GTAACTATACACTTTTTCCCATTCCACACTGTGCTT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGTCATTGCTTCTAACTaGGCATCGGTAATATGTTCA +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYVIASN*ASVICS
Trigger: TGAACATATTACCGATGCTCAGTTAGAAGCAATGAC...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATATTCTCCTTGATTACTaGTGTTCTGTCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYILLDY*CSVMEF
Trigger: GAACTCCATGACAGAACAGCAGTAATCAAGGAGAAT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAACTTCACTATCAACTaGCTGAATATTTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TWPEVKATYEVVQVNYACNFTIN*LNICLF
Trigger: AAAGAGGCAAATATTCAGGCAGTTGATAGTGAAGTT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATTTTCATGGCATATTCTaGCACAGCAACAAAACAACC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYFHGIF*HSNKTT
Trigger: GGTTGTTTTGTTGCTGTGGCAGAATATGCCATGAAA...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCATTGAAAAGACATGTTaGTCTCAAGTAGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFIEKTC*SQVDKR
Trigger: CCTCTTATCTACTTGAGAGCAACATGTCTTTTCAAT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATAGGAGCCATCCAATATaGTGTACCAATAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYRSHPI*CTNKGI
Trigger: GATTCCTTTATTGGTACACCATATTGGATGGCTCCT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCTCTCTAGTTAATACTTaGACAGAATTTGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFSLVNT*TEFGFS
Trigger: TGAGAAGCCAAATTCTGTCCAAGTATTAACTAGAGA...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR TCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATTTTTCCTTCACTGACTaGATTAATGTCCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYFSFTD*INVHSF
Trigger: GAAACTGTGGACATTAATTCAGTCAGTGAAGGAAAA...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR GCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATATTTGTTCTCGTTGTTaGTGTAGTTTGCTATTGAGC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYICSRC*CSLLLS
Trigger: GCTCAATAGCAAACTACAGCAACAACGAGAACAAAT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCAAACTACTTGTATTTaGGACTCAGTTAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYQTTCI*DSVNGL
Trigger: GAGACCATTAACTGAGTCCCAAATACAAGTAGTTTG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CCA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATTACTTGGACAGAATTTaGCTTCTCAGAAGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYYLDRI*LLRRVF
Trigger: AAAGACTCTTCTGAGAAGCCAAATTCTGTCCAAGTA...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 90 bp CCCTCCGGGAGCGGCACCTGCCCGCAAGCTCGCTCCCACCCGGCCTaGTCCGACGGGTCCGAGCGGTCAGGACTCCCGCGGCGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: PSGSGTCPQARSHPA*SDGSERSGLPRRRL
Trigger: AAGCCGCCGCCGCGGGAGTCCTGACCGCTCGGACCCGTCGGATCAGGCCGGGTGGGAGCGAGCTTGCGGGCAGGTGCCGCTCCCGGAGGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACTTCGAGCTCCCAAATaGCAGCTTCTCGAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSALRAPK*QLLELS
Trigger: TGAGAGCTCGAGAAGCTGCAATTTGGGAGCTCGAAG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAAATGTCCACAGTTTCTaGGTCTTCTGTGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSANVHSF*VFCVRQ
Trigger: CTGCCTGACACAGAAGACCAAGAAACTGTGGACATT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATCTTTATTCTGGGCCTaGTACACTTTCCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSASLFWA*YTFPKA
Trigger: AGCCTTTGGGAAAGTGTACAAGGCCCAGAATAAAGA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAAAGATGCACGCTTACTaGCAGGTATTGGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAKMHAY*QVLAEN
Trigger: ATTCTCTGCCAATACCTGCAAGTAAGCGTGCATCTT...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAGCTGATCACATCTTTTaGAGTTTTGTCGTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAADHIF*SFVVFP
Trigger: GGGGAAGACGACAAAACTCAAAAAGATGTGATCAGC...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCAGCTATTGAGCTGTTGTaGGGCTCTTTGCTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAAIELL*GSLLFF
Trigger: AAAGAAGAGCAAAGAGCCCAACAACAGCTCAATAGC...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACCAACACAGAGTTCCTaGCACTTAAGGACTAAAAAC +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAPTQSS*HLRTKN
Trigger: GTTTTTAGTCCTTAAGTGCAAGGAACTCTGTGTTGG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATCTCGGATGGGTTTGTaGGAATCAACAGTAACAAAG +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSASRMGL*ESTVTK
Trigger: CTTTGTTACTGTTGATTCCAACAAACCCATCCGAGA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACTGTTGTTGGGCTCTTaGCTCTTCTTTCTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSALLLGS*LFFLKK
Trigger: TTTCTTCAGAAAGAAGAGCAAAGAGCCCAACAACAG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATTCTCTTGTTCTCCTTaGATGCGTTTGGCTTCATCT +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAFSCSP*MRLASS
Trigger: AGATGAAGCCAAACGCATCAAAGGAGAACAAGAGAA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCATCTTTAAGCTGCTGTTaGAGCAGCTGGTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSASLSCC*SSWCFS
Trigger: AGAAAAACACCAGCTGCTCAAACAGCAGCTTAAAGA...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACCAAAATCCGCCAATTaGATATCTCCATCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSAPKSAN*ISPSKV
Trigger: TACCTTAGATGGAGATATCAAATTGGCGGATTTTGG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACACATCTCGCAAGCGATTaGTGTGCTCTTGTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITHLASD*CALVPG
Trigger: GCCTGGAACAAGAGCACACAAATCGCTTGCGAGATG...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp GACAGGACTAGGAAAGGCAGCCTAGTGCCCCAAGCTGTAGGAGCTGGATCTGCACGCAATTCTTCAGTTTaGGAATCACTATCTGTAACT +
Preference number: 5 (lower is better)
Translates to: DRTRKGSLVPQAVGAGSARNSSV*ESLSVT
Trigger: AGTTACAGATAGTGATTCCAAAACTGAAGAATTGCG...TGCAGATCCAGCTCCTACAGCTTGGGGCACTAGGCTGCCTTTCCTAGTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGCGATTTGTGTGCTCTaGTTCCAGGCGTTCGATAGT +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITAICVL*FQAFDS
Trigger: ACTATCGAACGCCTGGAACAAGAGCACACAAATCGC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCATCTCCTTTGATGCGTTaGGCTTCATCTCGCAAGCGA +
Preference number: 5 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPSPLMR*ASSRKR
Trigger: TCGCTTGCGAGATGAAGCCAAACGCATCAAAGGAGA...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACACTCATGAGCTGTTGCTaGTTATTCAGGCACTCTCTC +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITLMSCC*LFRHSL
Trigger: GAGAGAGTGCCTGAATAACAAGCAACAGCTCATGAG...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTAGCTCTCATGAGCTGTaGCTTGTTATTCAGGCACTC +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFSSHEL*LVIQAL
Trigger: GAGTGCCTGAATAACAAGCAACAGCTCATGAGAGCT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAAGCTCTCATGAGCTGTaGCTTGTTATTCAGGCACTC +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITSSHEL*LVIQAL
Trigger: GAGTGCCTGAATAACAAGCAACAGCTCATGAGAGCT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTTCTCGCTCCCCAACTaGAAGATCTTACGGAAATTG +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFFSLPN*KILRKL
Trigger: CAATTTCCGTAAGATCTTCAAGTTGGGGAGCGAGAA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTAAGGTAAAGAGAATGTaGCCAGCCTTCAGATCTCTG +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFKVKRM*PAFRSL
Trigger: CAGAGATCTGAAGGCTGGCAACATTCTCTTTACCTT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAGCTGATCACATCTTTTaGAGTTTTGTCGTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPADHIF*SFVVFP
Trigger: GGGGAAGACGACAAAACTCAAAAAGATGTGATCAGC...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGCTATTGAGCTGTTGTaGGGCTCTTTGCTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITAIELL*GSLLFF
Trigger: AAAGAAGAGCAAAGAGCCCAACAACAGCTCAATAGC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTGCTGTAGTTTGCTATaGAGCTGTTGTTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFCCSLL*SCCWAL
Trigger: AAGAGCCCAACAACAGCTCAATAGCAAACTACAGCA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCACGTTGTTGCTGTAGTTaGCTATTGAGCTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPRCCCS*LLSCCW
Trigger: CCAACAACAGCTCAATAGCAAACTACAGCAACAACG...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCATCTCGCAAGCGATTaGTGTGCTCTTGTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRHLASD*CALVPG
Trigger: GCCTGGAACAAGAGCACACAAATCGCTTGCGAGATG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCTGAGAGCTTTGTGCTaGAGGAAGTATGACTTAGAG +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFLRALC*RKYDLE
Trigger: CTCTAAGTCATACTTCCTCAAGCACAAAGCTCTCAG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCACTGAGAGCTTTGTGCTaGAGGAAGTATGACTTAGAG +
Preference number: 5 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPLRALC*RKYDLE
Trigger: CTCTAAGTCATACTTCCTCAAGCACAAAGCTCTCAG...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAATATGCCTGAGAGCTTaGTGCTTGAGGAAGTATGAC +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITICLRA*CLRKYD
Trigger: GTCATACTTCCTCAAGCACAAAGCTCTCAGGCATAT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTTTCTGAACAAACTCTaGTTCCTGAGCATGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFFLNKL*FLSMLA
Trigger: AGCCAGCATGCTCAGGAACAAGAGTTTGTTCAGAAA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS TCA 90 bp AAACTCTTGTTCGTCCTGCATTTGGGCGTTGAAGACTGCACAAGATaGCAACTGAAAAGACTGAATCATGATCTGAGCAACACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KLLFVLHLGVEDCTR*QLKRLNHDLSNTLS
Trigger: GCTCAGGGTGTTGCTCAGATCATGATTCAGTCTTTTCAGTTGTCATCTTGTGCAGTCTTCAACGCCCAAATGCAGGACGAACAAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672560.1
CDS GCA 90 bp TGTTCTCCTTTGATGCGTTTGGCTTCATCTCGCAAGCGATTTGTGTaGTCTTGTTCCAGGCGTTCGATAGTCTGTTTCTGCTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: CSPLMRLASSRKRFV*SCSRRSIVCFCCFS
Trigger: AGAAAAACAGCAGAAACAGACTATCGAACGCCTGGAACAAGAGCACACAAATCGCTTGCGAGATGAAGCCAAACGCATCAAAGGAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335753.8
ENST00000369755.4
ENST00000474260.1
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCCAACACAGAGTTCCTaGCACTTAAGGACTAAAAAC +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFPTQSS*HLRTKN
Trigger: GTTTTTAGTCCTTAAGTGCAAGGAACTCTGTGTTGG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGCATGGAGTTCAGTCATaGCTTCTAACTGAGCATCGG +
Preference number: 5 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAHGVQS*LLTEHR
Trigger: CCGATGCTCAGTTAGAAGCAATGACTGAACTCCATG...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACATTCTCTTGTTCTCCTTaGATGCGTTTGGCTTCATCT +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITFSCSP*MRLASS
Trigger: AGATGAAGCCAAACGCATCAAAGGAGAACAAGAGAA...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCACCAAGATGCTACTTaGCCAACATGGCCTAGCGTC +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFHQDAT*PTWPSV
Trigger: GACGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCCGCACTGTATGGTTGTaGACAGGACTAGGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRRTVWL*TGLGKA
Trigger: TGCCTTTCCTAGTCCTGTCAACAACCATACAGTGCG...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS GCA 90 bp CTCCTCTTTCCTGCGTTTCATGAGCTCTTTTCTCAGCTCTTTGGGTaGTTTCTCCACTTCATTTATAACCTCCTTCTTTCGGTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LLFPAFHELFSQLFG*FLHFIYNLLLSVLQ
Trigger: CTGAAGAACCGAAAGAAGGAGGTTATAAATGAAGTGGAGAAAGCACCCAAAGAGCTGAGAAAAGAGCTCATGAAACGCAGGAAAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS CCA 90 bp ACAAGTGGCATTTTTCATTCTGCAGCTGATGCAGTTCGCGGACATTaGCTTCACACTGCAACTGAAGATCTCGCATTTGATTCTCATGTT +
Preference number: 5 (lower is better)
Translates to: TSGIFHSAADAVRGH*LHTATEDLAFDSHV
Trigger: AACATGAGAATCAAATGCGAGATCTTCAGTTGCAGTGTGAAGCCAATGTCCGCGAACTGCATCAGCTGCAGAATGAAAAATGCCACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGAAGGTAAAGAGAATGTaGCCAGCCTTCAGATCTCTG +
Preference number: 5 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAKVKRM*PAFRSL
Trigger: CAGAGATCTGAAGGCTGGCAACATTCTCTTTACCTT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTTAGCAGCACTCGCATaGGATTTAATTCATGATGAG +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFLAALA*DLIHDE
Trigger: CTCATCATGAATTAAATCCAATGCGAGTGCTGCTAA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACATTAGCAGCACTCGCATaGGATTTAATTCATGATGAG +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITLAALA*DLIHDE
Trigger: CTCATCATGAATTAAATCCAATGCGAGTGCTGCTAA...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCAAATTCTCGGATGGGTTaGTTGGAATCAACAGTAACA +
Preference number: 5 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPNSRMG*LESTVT
Trigger: TGTTACTGTTGATTCCAACAAACCCATCCGAGAATT...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAGCTTACTTGCAGGTATaGGCAGAGAATTTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITAYLQV*AENFLF
Trigger: AAACAGAAAATTCTCTGCCAATACCTGCAAGTAAGC...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCATCTCTTTCATTCTCCTaGATTACTGCTGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPSLSFS*ITAVLS
Trigger: TGACAGAACAGCAGTAATCAAGGAGAATGAAAGAGA...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACATCTCTTTCATTCTCCTaGATTACTGCTGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITSLSFS*ITAVLS
Trigger: TGACAGAACAGCAGTAATCAAGGAGAATGAAAGAGA...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGTTTGCTATTGAGCTGTaGTTGGGCTCTTTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAFAIEL*LGSLLF
Trigger: GAAGAGCAAAGAGCCCAACAACAGCTCAATAGCAAA...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGCGTTGTTGCTGTAGTTaGCTATTGAGCTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLARCCCS*LLSCCW
Trigger: CCAACAACAGCTCAATAGCAAACTACAGCAACAACG...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTGCGATTTGTGTGCTCTaGTTCCAGGCGTTCGATAGT +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACAICVL*FQAFDS
Trigger: ACTATCGAACGCCTGGAACAAGAGCACACAAATCGC...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCTCTCCTTTGATGCGTTaGGCTTCATCTCGCAAGCGA +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFSPLMR*ASSRKR
Trigger: TCGCTTGCGAGATGAAGCCAAACGCATCAAAGGAGA...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTTTCTGAACAAACTCTaGTTCCTCCTTCTTTCGGTT +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFFLNKL*FLLLSV
Trigger: AACCGAAAGAAGGAGGAACAAGAGTTTGTTCAGAAA...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000335753.8
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTCTGCCTCTTTTCTTCTaGTGCAGCAAACTGTTTAAT +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFLPLFF*CSKLFN
Trigger: ATTAAACAGTTTGCTGCACAAGAAGAAAAGAGGCAG...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTTATAACAATCACTATCATCTATTaGAATACAGGGCCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: QGLRRGGLVWVQTAYFITITIIY*NTGPQK
Trigger: CTTCTGAGGCCCTGTATTCAAATAGATGATAGTGAT...TGTTATAAAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp TTGAATACAGGGCCTCAGAAGAGGTGGGCTGGTATGGGTACAAACAGCGTATTTAAATCAGCAGTAGATTaGACTGTACCCTTCGATTTC +
Preference number: 5 (lower is better)
Translates to: LNTGPQKRWAGMGTNSVFKSAVD*TVPFDF
Trigger: GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTT...AAATACGCTGTTTGTACCCATACCAGCCCACCTCTTCTGAGGCCCTGTATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGATATGCCTGAGAGCTTaGTGCTTGAGGAAGTATGAC +
Preference number: 5 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAICLRA*CLRKYD
Trigger: GTCATACTTCCTCAAGCACAAAGCTCTCAGGCATAT...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAGCTGCAGCCCACATaGAAACCTGGCAAACACTCT +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFKLQPT*KPGKHS
Trigger: AGAGTGTTTGCCAGGTTTCAATGTGGGCTGCAGCTT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAAGCTGCAGCCCACATaGAAACCTGGCAAACACTCT +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACKLQPT*KPGKHS
Trigger: AGAGTGTTTGCCAGGTTTCAATGTGGGCTGCAGCTT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 90 bp CAGGCAGATTTTCAAGCTTGGGCCTCTTCTCTCTTTCATTCTCCTTaGTTACTGCTGTTCTGTCATGGAGTTCAGTCATTGCTTCTAACT +
Preference number: 5 (lower is better)
Translates to: QADFQAWASSLFHSP*LLLFCHGVQSLLLT
Trigger: AGTTAGAAGCAATGACTGAACTCCATGACAGAACAGCAGTAATCAAGGAGAATGAAAGAGAGAAGAGGCCCAAGCTTGAAAATCTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTCATGGAGTTCAGTCATaGCTTCTAACTGAGCATCGG +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACHGVQS*LLTEHR
Trigger: CCGATGCTCAGTTAGAAGCAATGACTGAACTCCATG...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGGTTCCTGGTTCCTCATaGATGTCCATTATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLAVPGSS*MSIMFS
Trigger: AGAGAACATAATGGACATCAATGAGGAACCAGGAAC...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCTTTGCTATTGAGCTGTaGTTGGGCTCTTTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRFAIEL*LGSLLF
Trigger: GAAGAGCAAAGAGCCCAACAACAGCTCAATAGCAAA...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCTGCTGTAGTTTGCTATaGAGCTGTTGTTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRCCSLL*SCCWAL
Trigger: AAGAGCCCAACAACAGCTCAATAGCAAACTACAGCA...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCTTCGAGCTCCCAAATaGCAGCTTCTCGAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYLRAPK*QLLELS
Trigger: TGAGAGCTCGAGAAGCTGCAATTTGGGAGCTCGAAG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACACTGAATCCAAAAGGCAGTTTTAAGGGAGATCCAACCTTACCCACAGCGCCATTCCTCAATAAGTCTTaGATTGTAACGCTGCATTTG +
Preference number: 5 (lower is better)
Translates to: TLNPKGSFKGDPTLPTAPFLNKS*IVTLHL
Trigger: CAAATGCAGCGTTACAATCAAAGACTTATTGAGGAA...TGGCGCTGTGGGTAAGGTTGGATCTCCCTTAAAACTGCCTTTTGGATTCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTGAATCTTGGGCAGTCTaGCTCTTTCTTGAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACESWAV*LFLESV
Trigger: GACAGACTCAAGAAAGAGCAAGACTGCCCAAGATTC...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGAATCTTGGGCAGTCTaGCTCTTTCTTGAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFESWAV*LFLESV
Trigger: GACAGACTCAAGAAAGAGCAAGACTGCCCAAGATTC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 90 bp TCTCCACTGTCAGAGTTGATATTAATACTGGGTATTAGAACAGGCTaGGGTTCAGTGGGCTGTGAAACTACAGTAACTTCAGGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SPLSELILILGIRTG*GSVGCETTVTSGSF
Trigger: AAAAGAGCCTGAAGTTACTGTAGTTTCACAGCCCACTGAACCTCAGCCTGTTCTAATACCCAGTATTAATATCAACTCTGACAGTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 90 bp ATACTGAAAGAGCCAAACCCACGCACAGAATGCTTCCCTTTGTTATaGTCCGGTGGAATGCAAGCTGGGAATAGGATAAAATTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: ILKEPNPRTECFPLL*SGGMQAGNRIKFGN
Trigger: ATTTCCAAATTTTATCCTATTCCCAGCTTGCATTCCACCGGATCATAACAAAGGGAAGCATTCTGTGCGTGGGTTTGGCTCTTTCAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS GCA 90 bp CTCTTTGCCATCTTCAACTTCTTCTGTTACTTCAGCCTTCGCCTCTaGAATCAATTCTCGGATGGGTTTGTTGGAATCAACAGTAACAAA +
Preference number: 5 (lower is better)
Translates to: LFAIFNFFCYFSLRL*NQFSDGFVGINSNK
Trigger: TTTGTTACTGTTGATTCCAACAAACCCATCCGAGAATTGATTGCAGAGGCGAAGGCTGAAGTAACAGAAGAAGTTGAAGATGGCAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTTTCTCGCTCCCCAACTaGAAGATCTTACGGAAATTG +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACFSLPN*KILRKL
Trigger: CAATTTCCGTAAGATCTTCAAGTTGGGGAGCGAGAA...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAGATGCACGCTTACTaGCAGGTATTGGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFKMHAY*QVLAEN
Trigger: ATTCTCTGCCAATACCTGCAAGTAAGCGTGCATCTT...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ATATACAAAGTCACCTTAGTCACCAAGATGCTACTTTGCCAACATGGCCTAGCGCGATTATGGTCATATTaGAAAGCGAACTCAAGCACA +
Preference number: 5 (lower is better)
Translates to: IYKVTLVTKMLLCQHGLARLWSY*KANSST
Trigger: TGTGCTTGAGTTCGCTTTCAAATATGACCATAATCG...CGCTAGGCCATGTTGGCAAAGTAGCATCTTGGTGACTAAGGTGACTTTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCGCACTGTATGGTTGTaGACAGGACTAGGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYRTVWL*TGLGKA
Trigger: TGCCTTTCCTAGTCCTGTCAACAACCATACAGTGCG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTATTCGCACTGTATGGTaGTTGACAGGACTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACIRTVW*LTGLGK
Trigger: CTTTCCTAGTCCTGTCAACAACCATACAGTGCGAAT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS GCA 90 bp TTATTCAGGCACTCTCTCTCAATATTAGCTAACTCTGCCTTCTGCTaGTGGATGATCTTTTTCAGAGAGCCATCTAATTCTTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LFRHSLSILANSAFC*WMIFFREPSNSCCC
Trigger: ACAACAGCAAGAATTAGATGGCTCTCTGAAAAAGATCATCCAGCAGCAGAAGGCAGAGTTAGCTAATATTGAGAGAGAGTGCCTGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335753.8
ENST00000369755.4
ENST00000474260.1
ENST00000672560.1
CDS-3UTR CAA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCGCATCTAAAGTCTGCTaGCAAACTACTTGTATTTGG +
Preference number: 5 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRASKVC*QTTCIW
Trigger: CCAAATACAAGTAGTTTGCAAGCAGACTTTAGATGC...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTTCTCGGATGGGTTTGTaGGAATCAACAGTAACAAAG +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACSRMGL*ESTVTK
Trigger: CTTTGTTACTGTTGATTCCAACAAACCCATCCGAGA...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATAATGTCCACAGTTTCTaGGTCTTCTGTGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYNVHSF*VFCVRQ
Trigger: CTGCCTGACACAGAAGACCAAGAAACTGTGGACATT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCTCATGAGCTGTTGCTaGTTATTCAGGCACTCTCTC +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYLMSCC*LFRHSL
Trigger: GAGAGAGTGCCTGAATAACAAGCAACAGCTCATGAG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCAAAGAAGTCTGCGCATACTTGGACAGAATTaGGCTTCTCAGAAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: NQISSRFDCTLRFQRSLRILGQN*ASQKSL
Trigger: AAGACTCTTCTGAGAAGCCAAATTCTGTCCAAGTAT...GCGCAGACTTCTTTGAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCGCATCTAAAGTCTGCTaGCAAACTACTTGTATTTGG +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFASKVC*QTTCIW
Trigger: CCAAATACAAGTAGTTTGCAAGCAGACTTTAGATGC...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTCCAAAATCCGCCAATTaGATATCTCCATCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACPKSAN*ISPSKV
Trigger: TACCTTAGATGGAGATATCAAATTGGCGGATTTTGG...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAATTCTCGGATGGGTTaGTTGGAATCAACAGTAACA +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACNSRMG*LESTVT
Trigger: TGTTACTGTTGATTCCAACAAACCCATCCGAGAATT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTGCTTACTTGCAGGTATaGGCAGAGAATTTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACAYLQV*AENFLF
Trigger: AAACAGAAAATTCTCTGCCAATACCTGCAAGTAAGC...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCTGCCTCTTTTCTTCTaGTGCAGCAAACTGTTTAAT +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFLPLFF*CSKLFN
Trigger: ATTAAACAGTTTGCTGCACAAGAAGAAAAGAGGCAG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTAAATCAGCAGTAGATTaGACTGTACCCTTCGATTTC +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACKSAVD*TVPFDF
Trigger: GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTT...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATATTCGCACTGTATGGTaGTTGACAGGACTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYIRTVW*LTGLGK
Trigger: CTTTCCTAGTCCTGTCAACAACCATACAGTGCGAAT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 90 bp AGCAAACTGTTTAATTTTATCACGGTCCTGATCTGGTGTGGCTGTTaGGTTAATTCTCAAACTCTTCTTAAACATGGCCATTCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SKLFNFITVLIWCGC*VNSQTLLKHGHSSL
Trigger: AAGACTCGAATGGCCATGTTTAAGAAGAGTTTGAGAATTAACTCAACAGCCACACCAGATCAGGACCGTGATAAAATTAAACAGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp ACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATGCTTGTTCTCCACTGTCAGAGTaGATATTAATACTGGGTATT +
Preference number: 5 (lower is better)
Translates to: TWPEVKATYEVVQVNYACSPLSE*ILILGI
Trigger: AATACCCAGTATTAATATCAACTCTGACAGTGGAGA...ACAAGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCTCTCCACTGTCAGAGTaGATATTAATACTGGGTATT +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFSPLSE*ILILGI
Trigger: AATACCCAGTATTAATATCAACTCTGACAGTGGAGA...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp CACAGCAACAAAACAACCAAATCAGCAGTAGATTTGACTGTACCCTTCGATTTCCGCAATTCTTCAGTTTaGGAATCACTATCTGTAACT +
Preference number: 5 (lower is better)
Translates to: HSNKTTKSAVDLTVPFDFRNSSV*ESLSVT
Trigger: AGTTACAGATAGTGATTCCAAAACTGAAGAATTGCG...GAAATCGAAGGGTACAGTCAAATCTACTGCTGATTTGGTTGTTTTGTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCTGTTGTTGGGCTCTTaGCTCTTCTTTCTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYLLLGS*LFFLKK
Trigger: TTTCTTCAGAAAGAAGAGCAAAGAGCCCAACAACAG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 90 bp TCCACTTCATTTATAACCTCCTTCTTTCGGTTCTTCAGCATATTCTaGAATTTGGACAACTCTTTCTCTTGTTCTCCTTTGATGCGTTTG +
Preference number: 5 (lower is better)
Translates to: STSFITSFFRFFSIF*NLDNSFSCSPLMRL
Trigger: CAAACGCATCAAAGGAGAACAAGAGAAAGAGTTGTCCAAATTTCAGAATATGCTGAAGAACCGAAAGAAGGAGGTTATAAATGAAGTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATCGATTATGGTCATATTaGAAAGCGAACTCAAGCACA +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYRLWSY*KANSST
Trigger: TGTGCTTGAGTTCGCTTTCAAATATGACCATAATCG...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATATCACTATCATCTATTaGAATACAGGGCCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYITIIY*NTGPQK
Trigger: CTTCTGAGGCCCTGTATTCAAATAGATGATAGTGAT...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS-3UTR CAA 90 bp AAACAAACTTGGCCAGAAGTTAAGGCTACCTACGAAGTTGTCCAAGTAAATTATTTCCTCAATAAGTCTTaGATTGTAACGCTGCATTTG +
Preference number: 5 (lower is better)
Translates to: KQTWPEVKATYEVVQVNYFLNKS*IVTLHL
Trigger: CAAATGCAGCGTTACAATCAAAGACTTATTGAGGAA...ATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAGTTTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 72 bp AGCGGCACCTGCCCGCAAGCTCGCTCCCACCCGGCCTaGTCCGACGGGTCCGAGCGGTCAGGACTCCCGCGG +
Preference number: 6 (lower is better)
Translates to: SGTCPQARSHPA*SDGSERSGLPR
Trigger: CCGCGGGAGTCCTGACCGCTCGGACCCGTCGGATCAGGCCGGGTGGGAGCGAGCTTGCGGGCAGGTGCCGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS GCA 72 bp CATGATCTGAGCAACACCCTGAGCATGCTGGCTTTGTaGAAGCTCCTCTTTCCTGCGTTTCATGAGCTCTTT +
Preference number: 6 (lower is better)
Translates to: HDLSNTLSMLAL*KLLFPAFHELF
Trigger: AAAGAGCTCATGAAACGCAGGAAAGAGGAGCTTGCACAAAGCCAGCATGCTCAGGGTGTTGCTCAGATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672560.1
CDS CAA 72 bp GCCTTCGCCTCTGCAATCAATTCTCGGATGGGTTTGTaGGAATCAACAGTAACAAAGGGATGCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: AFASAINSRMGL*ESTVTKGCCSS
Trigger: GCTGCTGCAGCATCCCTTTGTTACTGTTGATTCCAACAAACCCATCCGAGAATTGATTGCAGAGGCGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS CAA 72 bp AATCATGATCTGAGCAACACCCTGAGCATGCTGGCTTaGTGCAAGCTCCTCTTTCCTGCGTTTCATGAGCTC +
Preference number: 6 (lower is better)
Translates to: NHDLSNTLSMLA*CKLLFPAFHEL
Trigger: GAGCTCATGAAACGCAGGAAAGAGGAGCTTGCACAAAGCCAGCATGCTCAGGGTGTTGCTCAGATCATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672560.1
CDS GCA 72 bp TTGATGCGTTTGGCTTCATCTCGCAAGCGATTTGTGTaGTCTTGTTCCAGGCGTTCGATAGTCTGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: LMRLASSRKRFV*SCSRRSIVCFC
Trigger: GCAGAAACAGACTATCGAACGCCTGGAACAAGAGCACACAAATCGCTTGCGAGATGAAGCCAAACGCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335753.8
ENST00000369755.4
ENST00000474260.1
CDS CAA 72 bp TCAGCCTTCGCCTCTGCAATCAATTCTCGGATGGGTTaGTTGGAATCAACAGTAACAAAGGGATGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SAFASAINSRMG*LESTVTKGCCS
Trigger: GCTGCAGCATCCCTTTGTTACTGTTGATTCCAACAAACCCATCCGAGAATTGATTGCAGAGGCGAAGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS CAA 72 bp GCGTTTGGCTTCATCTCGCAAGCGATTTGTGTGCTCTaGTTCCAGGCGTTCGATAGTCTGTTTCTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: AFGFISQAICVL*FQAFDSLFLLF
Trigger: AAACAGCAGAAACAGACTATCGAACGCCTGGAACAAGAGCACACAAATCGCTTGCGAGATGAAGCCAAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335753.8
ENST00000369755.4
ENST00000474260.1
CDS TCA 72 bp GAGCCAAACCCACGCACAGAATGCTTCCCTTTGTTATaGTCCGGTGGAATGCAAGCTGGGAATAGGATAAAA +
Preference number: 6 (lower is better)
Translates to: EPNPRTECFPLL*SGGMQAGNRIK
Trigger: TTTTATCCTATTCCCAGCTTGCATTCCACCGGATCATAACAAAGGGAAGCATTCTGTGCGTGGGTTTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS GCA 72 bp GCTGGCGATACTAAGGTCAGAAGATGCACGCTTACTTaGAGGTATTGGCAGAGAATTTTCTGTTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: AGDTKVRRCTLT*RYWQRIFCFLL
Trigger: GAGGAGGAAACAGAAAATTCTCTGCCAATACCTGCAAGTAAGCGTGCATCTTCTGACCTTAGTATCGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS CAA 90 bp GCAAGCTCCTCTTTCCTGCGTTTCATGAGCTCTTTTCTCAGCTCTTaGGGTGCTTTCTCCACTTCATTTATAACCTCCTTCTTTCGGTTC +
Preference number: 6 (lower is better)
Translates to: ASSSFLRFMSSFLSS*GAFSTSFITSFFRF
Trigger: GAACCGAAAGAAGGAGGTTATAAATGAAGTGGAGAAAGCACCCAAAGAGCTGAGAAAAGAGCTCATGAAACGCAGGAAAGAGGAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS CAA 90 bp CAGTTCGCGGACATTGGCTTCACACTGCAACTGAAGATCTCGCATTaGATTCTCATGTTTCTGATGCTGAGCCATTCTCTCATTTTTCTG +
Preference number: 6 (lower is better)
Translates to: QFADIGFTLQLKISH*ILMFLMLSHSLIFL
Trigger: CAGAAAAATGAGAGAATGGCTCAGCATCAGAAACATGAGAATCAAATGCGAGATCTTCAGTTGCAGTGTGAAGCCAATGTCCGCGAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 72 bp TTCGTCCTGCATTTGGGCGTTGAAGACTGCACAAGATaGCAACTGAAAAGACTGAATCATGATCTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: FVLHLGVEDCTR*QLKRLNHDLSN
Trigger: GTTGCTCAGATCATGATTCAGTCTTTTCAGTTGTCATCTTGTGCAGTCTTCAACGCCCAAATGCAGGACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672560.1
CDS GCA 72 bp ATCTTCTTCAGAGCTGGCGATACTAAGGTCAGAAGATaGACGCTTACTTGCAGGTATTGGCAGAGAATTTTC +
Preference number: 6 (lower is better)
Translates to: IFFRAGDTKVRR*TLTCRYWQRIF
Trigger: GAAAATTCTCTGCCAATACCTGCAAGTAAGCGTGCATCTTCTGACCTTAGTATCGCCAGCTCTGAAGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS GCA 72 bp TCCCAAATTGCAGCTTCTCGAGCTCTCATGAGCTGTTaGTTGTTATTCAGGCACTCTCTCTCAATATTAGCT +
Preference number: 6 (lower is better)
Translates to: SQIAASRALMSC*LLFRHSLSILA
Trigger: AGCTAATATTGAGAGAGAGTGCCTGAATAACAAGCAACAGCTCATGAGAGCTCGAGAAGCTGCAATTTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335753.8
ENST00000369755.4
ENST00000474260.1
CDS GCA 72 bp CCTGCGTTTCATGAGCTCTTTTCTCAGCTCTTTGGGTaGTTTCTCCACTTCATTTATAACCTCCTTCTTTCG +
Preference number: 6 (lower is better)
Translates to: PAFHELFSQLFG*FLHFIYNLLLS
Trigger: CGAAAGAAGGAGGTTATAAATGAAGTGGAGAAAGCACCCAAAGAGCTGAGAAAAGAGCTCATGAAACGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369755.4
CDS CCA 72 bp ATTTTTCATTCTGCAGCTGATGCAGTTCGCGGACATTaGCTTCACACTGCAACTGAAGATCTCGCATTTGAT +
Preference number: 6 (lower is better)
Translates to: IFHSAADAVRGH*LHTATEDLAFD
Trigger: ATCAAATGCGAGATCTTCAGTTGCAGTGTGAAGCCAATGTCCGCGAACTGCATCAGCTGCAGAATGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS CAA 72 bp AAGCGCCGGAAAATTTGTTCTCGTTGTTGCTGTAGTTaGCTATTGAGCTGTTGTTGGGCTCTTTGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: KRRKICSRCCCS*LLSCCWALCSS
Trigger: AGAAGAGCAAAGAGCCCAACAACAGCTCAATAGCAAACTACAGCAACAACGAGAACAAATTTTCCGGCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS CAA 72 bp TTGGACAACTCTTTCTCTTGTTCTCCTTTGATGCGTTaGGCTTCATCTCGCAAGCGATTTGTGTGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: LDNSFSCSPLMR*ASSRKRFVCSC
Trigger: ACAAGAGCACACAAATCGCTTGCGAGATGAAGCCAAACGCATCAAAGGAGAACAAGAGAAAGAGTTGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335753.8
ENST00000369755.4
ENST00000474260.1
CDS CAA 90 bp TCAGGCAGATTTTCAAGCTTGGGCCTCTTCTCTCTTTCATTCTCCTaGATTACTGCTGTTCTGTCATGGAGTTCAGTCATTGCTTCTAAC +
Preference number: 6 (lower is better)
Translates to: SGRFSSLGLFSLSFS*ITAVLSWSSVIASN
Trigger: GTTAGAAGCAATGACTGAACTCCATGACAGAACAGCAGTAATCAAGGAGAATGAAAGAGAGAAGAGGCCCAAGCTTGAAAATCTGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 72 bp TTTCAAGCTTGGGCCTCTTCTCTCTTTCATTCTCCTTaGTTACTGCTGTTCTGTCATGGAGTTCAGTCATTG +
Preference number: 6 (lower is better)
Translates to: FQAWASSLFHSP*LLLFCHGVQSL
Trigger: CAATGACTGAACTCCATGACAGAACAGCAGTAATCAAGGAGAATGAAAGAGAGAAGAGGCCCAAGCTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 72 bp GGGAATAGGATAAAATTTGGAAATCCGGCTCTGTGTTaGTGGGTTAAGGCATTCAGACTCCCCAGTCATTTT +
Preference number: 6 (lower is better)
Translates to: GNRIKFGNPALC*WVKAFRLPSHF
Trigger: AAAATGACTGGGGAGTCTGAATGCCTTAACCCATCAACACAGAGCCGGATTTCCAAATTTTATCCTATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 72 bp TCTGAACAAACTCTTGTTCGTCCTGCATTTGGGCGTTaGAGACTGCACAAGATGACAACTGAAAAGACTGAA +
Preference number: 6 (lower is better)
Translates to: SEQTLVRPAFGR*RLHKMTTEKTE
Trigger: TTCAGTCTTTTCAGTTGTCATCTTGTGCAGTCTTCAACGCCCAAATGCAGGACGAACAAGAGTTTGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672560.1
CDS GCA 72 bp ATCTTCAACTTCTTCTGTTACTTCAGCCTTCGCCTCTaGAATCAATTCTCGGATGGGTTTGTTGGAATCAAC +
Preference number: 6 (lower is better)
Translates to: IFNFFCYFSLRL*NQFSDGFVGIN
Trigger: GTTGATTCCAACAAACCCATCCGAGAATTGATTGCAGAGGCGAAGGCTGAAGTAACAGAAGAAGTTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS CAA 72 bp CAAATTGCAGCTTCTCGAGCTCTCATGAGCTGTTGCTaGTTATTCAGGCACTCTCTCTCAATATTAGCTAAC +
Preference number: 6 (lower is better)
Translates to: QIAASRALMSCC*LFRHSLSILAN
Trigger: GTTAGCTAATATTGAGAGAGAGTGCCTGAATAACAAGCAACAGCTCATGAGAGCTCGAGAAGCTGCAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335753.8
ENST00000369755.4
ENST00000474260.1
CDS TCA 72 bp TTTTTCAGAGAGCCATCTAATTCTTGCTGTTGTTTCTaGACAAACTCTTGTTCGTCCTGCATTTGGGCGTTG +
Preference number: 6 (lower is better)
Translates to: FFREPSNSCCCF*TNSCSSCIWAL
Trigger: CAACGCCCAAATGCAGGACGAACAAGAGTTTGTTCAGAAACAACAGCAAGAATTAGATGGCTCTCTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672560.1
CDS GCA 72 bp CACTCTCTCTCAATATTAGCTAACTCTGCCTTCTGCTaGTGGATGATCTTTTTCAGAGAGCCATCTAATTCT +
Preference number: 6 (lower is better)
Translates to: HSLSILANSAFC*WMIFFREPSNS
Trigger: AGAATTAGATGGCTCTCTGAAAAAGATCATCCAGCAGCAGAAGGCAGAGTTAGCTAATATTGAGAGAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335753.8
ENST00000369755.4
ENST00000474260.1
ENST00000672560.1
CDS TCA 72 bp TCTTGTGCAGCAAACTGTTTAATTTTATCACGGTCCTaGTCTGGTGTGGCTGTTGAGTTAATTCTCAAACTC +
Preference number: 6 (lower is better)
Translates to: SCAANCLILSRS*SGVAVELILKL
Trigger: GAGTTTGAGAATTAACTCAACAGCCACACCAGATCAGGACCGTGATAAAATTAAACAGTTTGCTGCACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 72 bp TTTTTCAGAGAGCCATCTAATTCTTGCTGTTGTTTCTaGACAAACTCTTGTTCCTCCTTCTTTCGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: FFREPSNSCCCF*TNSCSSFFRFF
Trigger: GAAGAACCGAAAGAAGGAGGAACAAGAGTTTGTTCAGAAACAACAGCAAGAATTAGATGGCTCTCTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000474260.1
CDS CCA 72 bp AATGCATCTAAAGTCTGCTTGCAAACTACTTGTATTTaGGACTCAGTTAATGGTCTCTCAAGTTCAAGCATC +
Preference number: 6 (lower is better)
Translates to: NASKVCLQTTCI*DSVNGLSSSSI
Trigger: GATGCTTGAACTTGAGAGACCATTAACTGAGTCCCAAATACAAGTAGTTTGCAAGCAGACTTTAGATGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS CAA 72 bp GCCAATTTGATATCTCCATCTAAGGTAAAGAGAATGTaGCCAGCCTTCAGATCTCTGTGGATGATCTTATTA +
Preference number: 6 (lower is better)
Translates to: ANLISPSKVKRM*PAFRSLWMILL
Trigger: TAATAAGATCATCCACAGAGATCTGAAGGCTGGCAACATTCTCTTTACCTTAGATGGAGATATCAAATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS TCA 72 bp TTTAATTTTATCACGGTCCTGATCTGGTGTGGCTGTTaGGTTAATTCTCAAACTCTTCTTAAACATGGCCAT +
Preference number: 6 (lower is better)
Translates to: FNFITVLIWCGC*VNSQTLLKHGH
Trigger: ATGGCCATGTTTAAGAAGAGTTTGAGAATTAACTCAACAGCCACACCAGATCAGGACCGTGATAAAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS GCA 72 bp TATCATGTAAGTAGTTCAATGCATCTAAAGTCTGCTTaGAAACTACTTGTATTTGGGACTCAGTTAATGGTC +
Preference number: 6 (lower is better)
Translates to: YHVSSSMHLKSA*KLLVFGTQLMV
Trigger: GACCATTAACTGAGTCCCAAATACAAGTAGTTTGCAAGCAGACTTTAGATGCATTGAACTACTTACATGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4
CDS CAA 72 bp TCAGGTTCATCAGTGGTGGGTTTTTCATTAAGAATTTaGCTGTTGAGTTTATCTTCAGAGTTACTACGTTCT +
Preference number: 6 (lower is better)
Translates to: SGSSVVGFSLRI*LLSLSSELLRS
Trigger: AGAACGTAGTAACTCTGAAGATAAACTCAACAGCAAAATTCTTAATGAAAAACCCACCACTGATGAACCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335753.8
ENST00000369755.4