RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLITRK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000165300

Ensembl transcript IDs: ENST00000325089.7, ENST00000683689.1

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGGCGAGAGCCACGGCGCCTGGTCCCACGATTACTTCTTGCCTTaGACCCTGAGCTTCTGGGATAGGCTGCAGCCACTGGAGACCCTG +
Preference number: 1 (lower is better)
Translates to: TGESHGAWSHDYFLP*TLSFWDRLQPLETL
Trigger: CAGGGTCTCCAGTGGCTGCAGCCTATCCCAGAAGCTCAGGGTGCAAGGCAAGAAGTAATCGTGGGACCAGGCGCCGTGGCTCTCGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 90 bp ACCGAAGCTGAGAAATCCCGTGCCAAGGCACTTCACCCTAAACGTTaGAACAACACAATTAATCAAATGTGTTCACTGTGTGTGTCTGCT +
Preference number: 1 (lower is better)
Translates to: TEAEKSRAKALHPKR*NNTINQMCSLCVSA
Trigger: AGCAGACACACACAGTGAACACATTTGATTAATTGTGTTGTTTCAACGTTTAGGGTGAAGTGCCTTGGCACGGGATTTCTCAGCTTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 90 bp CTGCCCACAGGGATAAAGACATTGTATAGAGACTTGTACAGTCCATaGTTTGGTCTTCTGAGGTGCCAGTACACGTGGATCTGTACAAAT +
Preference number: 1 (lower is better)
Translates to: LPTGIKTLYRDLYSP*FGLLRCQYTWICTN
Trigger: ATTTGTACAGATCCACGTGTACTGGCACCTCAGAAGACCAAATCATGGACTGTACAAGTCTCTATACAATGTCTTTATCCCTGTGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 90 bp GCCTGCAATGGCAACATTAGTAAGCCACACTCTGTTCTGAAAACATaGCAGACAGAGATGATATCTCACATGGCTTCTTGGCATCATTTT +
Preference number: 1 (lower is better)
Translates to: ACNGNISKPHSVLKT*QTEMISHMASWHHF
Trigger: AAAATGATGCCAAGAAGCCATGTGAGATATCATCTCTGTCTGTCATGTTTTCAGAACAGAGTGTGGCTTACTAATGTTGCCATTGCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 90 bp CCCAGTTTACACAAATGTTTCCCACGTGTAAATTTTAAAGGAAATTaGACACCCTTTTCGTATCTTCCACCGAAGCTGAGAAATCCCGTG +
Preference number: 1 (lower is better)
Translates to: PSLHKCFPRVNFKGN*TPFSYLPPKLRNPV
Trigger: CACGGGATTTCTCAGCTTCGGTGGAAGATACGAAAAGGGTGTGCAATTTCCTTTAAAATTTACACGTGGGAAACATTTGTGTAAACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CCA 90 bp TGGTCTTCTGAGGTGCCAGTACACGTGGATCTGTACAAATGCAACTaGGTTTGGTTAAACAATCGAAAATCGGCTACAATAGTAGTCAAA +
Preference number: 1 (lower is better)
Translates to: WSSEVPVHVDLYKCN*VWLNNRKSATIVVK
Trigger: TTTGACTACTATTGTAGCCGATTTTCGATTGTTTAACCAAACCCAGTTGCATTTGTACAGATCCACGTGTACTGGCACCTCAGAAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 90 bp ATGATTTGGTCTTCTGAGGTGCCAGTACACGTGGATCTGTACAAATaGAACTGGGTTTGGTTAAACAATCGAAAATCGGCTACAATAGTA +
Preference number: 1 (lower is better)
Translates to: MIWSSEVPVHVDLYK*NWVWLNNRKSATIV
Trigger: TACTATTGTAGCCGATTTTCGATTGTTTAACCAAACCCAGTTGCATTTGTACAGATCCACGTGTACTGGCACCTCAGAAGACCAAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 90 bp ACAGTAGCCCCATCTTACAGATATCCTGTTTGTCATTATCATCATTaGTTGCTGCCCACAGGGATAAAGACATTGTATAGAGACTTGTAC +
Preference number: 1 (lower is better)
Translates to: TVAPSYRYPVCHYHH*LLPTGIKTLYRDLY
Trigger: GTACAAGTCTCTATACAATGTCTTTATCCCTGTGGGCAGCAAGCAATGATGATAATGACAAACAGGATATCTGTAAGATGGGGCTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 90 bp TCATGCCAAAGTACTAAACACTCACCTGATATCCTTATCGACATTTaGGCCATCTTTGCAGTTTATGTCAAGATAAATGGCGTTACGATG +
Preference number: 1 (lower is better)
Translates to: SCQSTKHSPDILIDI*AIFAVYVKINGVTM
Trigger: CATCGTAACGCCATTTATCTTGACATAAACTGCAAAGATGGCTCAAATGTCGATAAGGATATCAGGTGAGTGTTTAGTACTTTGGCATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 90 bp TATGTCAAGATAAATGGCGTTACGATGGAGCACTCAAGAAGTTTTTaGTATTCACTAAATTCACCTTGGTCTGCAGACATCTACAAGTAC +
Preference number: 1 (lower is better)
Translates to: YVKINGVTMEHSRSF*YSLNSPWSADIYKY
Trigger: GTACTTGTAGATGTCTGCAGACCAAGGTGAATTTAGTGAATATCAAAAACTTCTTGAGTGCTCCATCGTAACGCCATTTATCTTGACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGCAGGTGGATCACCTaGAGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: CNRCLRVQASASRVAGITGRWIT*SQEFKT
Trigger: GGTCTTGAACTCCTGACTTCAGGTGATCCACCTGCC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGATCCTAATACAGTGTaGCACCTCTGCAAAATCATA +
Preference number: 2 (lower is better)
Translates to: CNRCLRVQASASRVAGITDPNTV*HLCKII
Trigger: TATGATTTTGCAGAGGTGTCACACTGTATTAGGATC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACTCTTGTCAAGTATATaGGCAGTTGAACAGTTTAGG +
Preference number: 2 (lower is better)
Translates to: CNRCLRVQASASRVAGITLLSSI*AVEQFR
Trigger: CCTAAACTGTTCAACTGCTCATATACTTGACAAGAG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATTATGTCAAGATAAATaGCGTTACGATGGAGCACTC +
Preference number: 2 (lower is better)
Translates to: CNRCLRVQASASRVAGITLCQDK*RYDGAL
Trigger: GAGTGCTCCATCGTAACGCCATTTATCTTGACATAA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAATGTTGCAAAGAATATaGACAGCTTACTGTACTTGG +
Preference number: 2 (lower is better)
Translates to: CNRCLRVQASASRVAGITMLQRI*TAYCTW
Trigger: CCAAGTACAGTAAGCTGTTCATATTCTTTGCAACAT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACCAGTCATATACTACTaGTATGCCCATTCCAATTAT +
Preference number: 2 (lower is better)
Translates to: CNRCLRVQASASRVAGITPVIYY*YAHSNY
Trigger: ATAATTGGAATGGGCATATCAGTAGTATATGACTGG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAAATTCACCTTGGTCTaGAGACATCTACAAGTACAT +
Preference number: 2 (lower is better)
Translates to: CNRCLRVQASASRVAGITKFTLV*RHLQVH
Trigger: ATGTACTTGTAGATGTCTGCAGACCAAGGTGAATTT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAAATGTGGGTACTCATaGACAAGAATATCCACATTC +
Preference number: 2 (lower is better)
Translates to: CNRCLRVQASASRVAGITKCGYS*TRISTF
Trigger: GAATGTGGATATTCTTGTGCATGAGTACCCACATTT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGGTGAGGAACAGACTTaGGTTCCCAGGAAATTTGTC +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGGEEQT*VPRKFV
Trigger: GACAAATTTCCTGGGAACTCAAGTCTGTTCCTCACC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTGTGCTAGTAAGCCATaGTCTGCTAAAACCGGAGGA +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGCASKP*SAKTGG
Trigger: TCCTCCGGTTTTAGCAGACCATGGCTTACTAGCACA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGTACAGTCCATGATTTaGTCTTCTGAGGTGCCAGTA +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGVQSMI*SSEVPV
Trigger: TACTGGCACCTCAGAAGACCAAATCATGGACTGTAC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTTCCAGGTGAAACTATaGGGAGATCCACCTATAGCA +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGFQVKL*GDPPIA
Trigger: TGCTATAGGTGGATCTCCCCATAGTTTCACCTGGAA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAATCTTCCACCGAAGCTaGGAAATCCCGTGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQIFHRS*EIPCQG
Trigger: GCCTTGGCACGGGATTTCTCAGCTTCGGTGGAAGAT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCACCACCTGTTCAACCTaGATTCAAGTAGTTACTGTC +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGTTCST*IQVVTV
Trigger: GACAGTAACTACTTGAATTCAGGTTGAACAGGTGGT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCATGTGGGGGATGTCATaGATTTGCCTTAGGATATTC +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGMWGMS*ICLRIF
Trigger: GAATATCCTAAGGCAAATTCATGACATCCCCCACAT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACTCATGGGTGAATGCTaGCTCTTTGTGGCAGAATGC +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLMGEC*LFVAEC
Trigger: GCATTCTGCCACAAAGAGGCAGCATTCACCCATGAG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAATGCTGCCTCTTTGTaGCAGAATGCCATGGAAATT +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGNAASL*QNAMEI
Trigger: AATTTCCATGGCATTCTGCCACAAAGAGGCAGCATT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAATCCTCCGGGAAACTaGTACCACCTGTTCAACCTG +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKNPPGN*YHLFNL
Trigger: CAGGTTGAACAGGTGGTACCAGTTTCCCGGAGGATT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGATGTCCAGGGGCTGTaGGAGATAGTGCATTTTACA +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKDVQGL*EIVHFT
Trigger: TGTAAAATGCACTATCTCTCACAGCCCCTGGACATC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGTGGATCTGTACAAATaGAACTGGGTTTGGTTAAAC +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGVDLYK*NWVWLN
Trigger: GTTTAACCAAACCCAGTTGCATTTGTACAGATCCAC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCTAAGGCCAGAAACTaGGATCTTGGATTAAATTCT +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPKARN*DLGLNS
Trigger: AGAATTTAATCCAAGATCGCAGTTTCTGGCCTTAGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTCATTCCAGGTATCTTaGCATGCCTGCAAATATCTT +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGSFQVS*HACKYL
Trigger: AAGATATTTGCAGGCATGGCAAGATACCTGGAATGA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACGCAAGAAGAGAAAGTaGTGTGCCCAGTTTACACAA +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKRKKRK*CAQFTQ
Trigger: TTGTGTAAACTGGGCACATCACTTTCTCTTCTTGCG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTACCTCTTAAATTACTaGTGCCACTTCCCTTATGAT +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGYLLNY*CHFPYD
Trigger: ATCATAAGGGAAGTGGCAGCAGTAATTTAAGAGGTA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAGGTGCCAGTACACGTaGATCTGTACAAATGCAACT +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKRCQYT*ICTNAT
Trigger: AGTTGCATTTGTACAGATCCACGTGTACTGGCACCT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTGTGGCAGAATGCCATaGAAATTGTTCTTTAAACAC +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGCGRMP*KLFFKH
Trigger: GTGTTTAAAGAACAATTTCCATGGCATTCTGCCACA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATGTCCACATCTATGGTaGTCCTTTACAGGATCACAA +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKCPHLW*SFTGSQ
Trigger: TTGTGATCCTGTAAAGGATCACCATAGATGTGGACA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGACTTGTACAGTCCATaGTTTGGTCTTCTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQDLYSP*FGLLRC
Trigger: GCACCTCAGAAGACCAAATCATGGACTGTACAAGTC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAGCTTCTGTGTATGCTaGAATTATAATTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGSFCVC*NYNFPS
Trigger: AGAAGGGAAATTATAATTGCAGCATACACAGAAGCT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCATGTTATCATTAATCTaGAGTCATGTGACTTTGGGA +
Preference number: 2 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGMLSLI*SHVTLG
Trigger: TCCCAAAGTCACATGACTCCAGATTAATGATAACAT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATTGAAAATGCCTTCCTaGTACCACGTCAGTTTTAGA +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLKMPS*YHVSFR
Trigger: TCTAAAACTGACGTGGTATCAGGAAGGCATTTTCAA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATTTCTCATGGGTGAATaGTGCCTCTTTGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQFLMGE*CLFVAE
Trigger: TTCTGCCACAAAGAGGCAGCATTCACCCATGAGAAA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CAA 90 bp GTAGCCCCATCTTACAGATATCCTGTTTGTCATTATCATCATTGCTaGCTGCCCACAGGGATAAAGACATTGTATAGAGACTTGTACAGT +
Preference number: 2 (lower is better)
Translates to: VAPSYRYPVCHYHHC*LPTGIKTLYRDLYS
Trigger: ACTGTACAAGTCTCTATACAATGTCTTTATCCCTGTGGGCAGCAAGCAATGATGATAATGACAAACAGGATATCTGTAAGATGGGGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCATGATTTGGTCTTCTaGGGTGCCAGTACACGTGGA +
Preference number: 2 (lower is better)
Translates to: EPSMELFKLNSQILAFQTHDLVF*GASTRG
Trigger: TCCACGTGTACTGGCACCTCAGAAGACCAAATCATG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAATGCACCCATATATATaGTCATGGTCACTAGCTTTA +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKMHPYI*SWSLAL
Trigger: TAAAGCTAGTGACCATGAGCATATATATGGGTGCAT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACTCAAGTACATGCTATaGAAACAAATACCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLKYML*KQIPSL
Trigger: CAGAGAAGGTATTTGTTTGCATAGCATGTACTTGAG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACTGTCAATTTTCTCATaGGTGAATGCTGCCTCTTTG +
Preference number: 2 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQLSIFS*VNAASL
Trigger: CAAAGAGGCAGCATTCACCCATGAGAAAATTGACAG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACCGATGAACTTTTCATaGATGAAACATGCTAGTCAG +
Preference number: 2 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQPMNFS*MKHASQ
Trigger: CTGACTAGCATGTTTCATGCATGAAAAGTTCATCGG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAAATGCAACTGGGTTTaGTTAAACAATCGAAAATCG +
Preference number: 2 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKKCNWV*LNNRKS
Trigger: CGATTTTCGATTGTTTAACCAAACCCAGTTGCATTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGTGCTGGGATACATATaGGACTGTAACAACAGTAGC +
Preference number: 2 (lower is better)
Translates to: EPSMELFKLNSQILAFQTVLGYI*DCNNSS
Trigger: GCTACTGTTGTTACAGTCTCATATGTATCCCAGCAC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAACCTTATTCAAAGATaGCGAGCTCATATACACCAT +
Preference number: 2 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQNLIQR*RAHIHH
Trigger: ATGGTGTATATGAGCTCGTCATCTTTGAATAAGGTT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTGTACAAATTCCAGGTaGAACTATGGGGAGATCCAC +
Preference number: 2 (lower is better)
Translates to: EPSMELFKLNSQILAFQTCTNSR*NYGEIH
Trigger: GTGGATCTCCCCATAGTTTCACCTGGAATTTGTACA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACTCTTTGTGGCAGAATaGCATGGAAATTGTTCTTTA +
Preference number: 2 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQLFVAE*HGNCSL
Trigger: TAAAGAACAATTTCCATGGCATTCTGCCACAAAGAG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CAA 90 bp TTATGTCAAGATAAATGGCGTTACGATGGAGCACTCAAGAAGTTTTaGATATTCACTAAATTCACCTTGGTCTGCAGACATCTACAAGTA +
Preference number: 2 (lower is better)
Translates to: LCQDKWRYDGALKKF*IFTKFTLVCRHLQV
Trigger: TACTTGTAGATGTCTGCAGACCAAGGTGAATTTAGTGAATATCAAAAACTTCTTGAGTGCTCCATCGTAACGCCATTTATCTTGACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAACTTCCTGCTGCTGTaGAGAATAATACCAATCTCA +
Preference number: 2 (lower is better)
Translates to: EPSMELFKLNSQILAFQTNFLLL*RIIPIS
Trigger: TGAGATTGGTATTATTCTTCACAGCAGCAGGAAGTT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGCAGATTCAATTGGGTaGGTTGCATTGGCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: EPSMELFKLNSQILAFQTADSIG*VALAFK
Trigger: TTTAAAAGCCAATGCAACCCACCCAATTGAATCTGC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCTGTACAAATGCAACTaGGTTTGGTTAAACAATCGA +
Preference number: 2 (lower is better)
Translates to: EPSMELFKLNSQILAFQTLYKCN*VWLNNR
Trigger: TCGATTGTTTAACCAAACCCAGTTGCATTTGTACAG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTTTTCACAGTACGTGTaGATGTTCTCATTACAAACT +
Preference number: 2 (lower is better)
Translates to: EPSMELFKLNSQILAFQTFSQYV*MFSLQT
Trigger: AGTTTGTAATGAGAACATCCACACGTACTGTGAAAA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp GCGCCTGGTCCCACGATTACTTCTTGCCTTGCACCCTaGGCTTCTGGGATAGGCTGCAGCCACTGGAGACCC +
Preference number: 3 (lower is better)
Translates to: APGPTITSCLAP*ASGIGCSHWRP
Trigger: GGGTCTCCAGTGGCTGCAGCCTATCCCAGAAGCTCAGGGTGCAAGGCAAGAAGTAATCGTGGGACCAGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 72 bp AGCCACGGCGCCTGGTCCCACGATTACTTCTTGCCTTaGACCCTGAGCTTCTGGGATAGGCTGCAGCCACTG +
Preference number: 3 (lower is better)
Translates to: SHGAWSHDYFLP*TLSFWDRLQPL
Trigger: CAGTGGCTGCAGCCTATCCCAGAAGCTCAGGGTGCAAGGCAAGAAGTAATCGTGGGACCAGGCGCCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATGTAATTTCAGCACTTaGGGAGGCCGCGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: CNRCLRVQASASRVAGITCNFST*GGRGRW
Trigger: CCACCTGCCGCGGCCTCCCAAAGTGCTGAAATTACA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 72 bp GAGTGCAGTATCACGATCTCAGCTCACTGCAACCGCTaGCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCT +
Preference number: 3 (lower is better)
Translates to: ECSITISAHCNR*LRVQASASRVA
Trigger: AGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCAGTGAGCTGAGATCGTGATACTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACCAACCCCTTCTGGCTaGTTGCAATACAAGAGTTAC +
Preference number: 3 (lower is better)
Translates to: CNRCLRVQASASRVAGITPTPSG*LQYKSY
Trigger: GTAACTCTTGTATTGCAACAAGCCAGAAGGGGTTGG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp GGTTTCATCATGTTGGCCAGGCTAGTCTGGAACCCCTaGCCTCAAGTGATTCACCAGCCTCTGCCTCCCAAA +
Preference number: 3 (lower is better)
Translates to: GFIMLARLVWNP*PQVIHQPLPPK
Trigger: TTTGGGAGGCAGAGGCTGGTGAATCACTTGAGGTCAGGGGTTCCAGACTAGCCTGGCCAACATGATGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATTCACTAAATTCACCTaGGTCTGCAGACATCTACAA +
Preference number: 3 (lower is better)
Translates to: CNRCLRVQASASRVAGITFTKFT*VCRHLQ
Trigger: TTGTAGATGTCTGCAGACCAAGGTGAATTTAGTGAA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGTGAATGCTGCCTCTTaGTGGCAGAATGCCATGGAA +
Preference number: 3 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGVNAAS*WQNAME
Trigger: TTCCATGGCATTCTGCCACAAAGAGGCAGCATTCAC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACATATTTCCAATGAATaGGCCATTTACACTCTTGTC +
Preference number: 3 (lower is better)
Translates to: CNRCLRVQASASRVAGITHISNE*AIYTLV
Trigger: GACAAGAGTGTAAATGGCCAATTCATTGGAAATATG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATATCCTTATCGACATTaGAGCCATCTTTGCAGTTTA +
Preference number: 3 (lower is better)
Translates to: CNRCLRVQASASRVAGITYPYRH*SHLCSL
Trigger: TAAACTGCAAAGATGGCTCAAATGTCGATAAGGATA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp CTTCTCCACACCTGCCCCACACGCAAGAAGAGAAAGTaGTGTGCCCAGTTTACACAAATGTTTCCCACGTGT +
Preference number: 3 (lower is better)
Translates to: LLHTCPTRKKRK*CAQFTQMFPTC
Trigger: ACACGTGGGAAACATTTGTGTAAACTGGGCACATCACTTTCTCTTCTTGCGTGTGGGGCAGGTGTGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGTCATTCCAGGTATCTaGCCATGCCTGCAAATATCT +
Preference number: 3 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGVIPGI*PCLQIS
Trigger: AGATATTTGCAGGCATGGCAAGATACCTGGAATGAC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCATTGGGTGGGTTGCATaGGCTTTTAAAGATTTAGCC +
Preference number: 3 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGIGWVA*AFKDLA
Trigger: GGCTAAATCTTTAAAAGCCAATGCAACCCACCCAAT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAAGGAGGATCTCAGATaGTCACTGAGACTAGTAAAT +
Preference number: 3 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGKEDLR*SLRLVN
Trigger: ATTTACTAGTCTCAGTGACAATCTGAGATCCTCCTT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 72 bp CAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAACTaGCCTGAGGAATGTATTATTCCTTCTGGATTACTT +
Preference number: 3 (lower is better)
Translates to: QPQRKMCPCVGN*PEECIIPSGLL
Trigger: AAGTAATCCAGAAGGAATAATACATTCCTCAGGGCAGTTGCCTACACAGGGACACATTTTTCTCTGGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCACCCGCGCAGCAAATaGGCCTCCTTAAAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: EPSMELFKLNSQILAFQTHPRSK*ASLKPF
Trigger: GAAGGGCTTTAAGGAGGCCAATTTGCTGCGCGGGTG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAAATCGCAAATAAGTTaGTCAATGTGGACCAGGTAT +
Preference number: 3 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGKSQIS*SMWTRY
Trigger: ATACCTGGTCCACATTGACAAACTTATTTGCGATTT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp GGGATAAAGACATTGTATAGAGACTTGTACAGTCCATaGTTTGGTCTTCTGAGGTGCCAGTACACGTGGATC +
Preference number: 3 (lower is better)
Translates to: GIKTLYRDLYSP*FGLLRCQYTWI
Trigger: GATCCACGTGTACTGGCACCTCAGAAGACCAAATCATGGACTGTACAAGTCTCTATACAATGTCTTTATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp CACATACCTCTTAAATTACTGCTGCCACTTCCCTTATaGTGTCCAGGGGCTGTGAGAGATAGTGCATTTTAC +
Preference number: 3 (lower is better)
Translates to: HIPLKLLLPLPL*CPGAVRDSAFY
Trigger: GTAAAATGCACTATCTCTCACAGCCCCTGGACATCATAAGGGAAGTGGCAGCAGTAATTTAAGAGGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 72 bp TCTTCTGAGGTGCCAGTACACGTGGATCTGTACAAATaGAACTGGGTTTGGTTAAACAATCGAAAATCGGCT +
Preference number: 3 (lower is better)
Translates to: SSEVPVHVDLYK*NWVWLNNRKSA
Trigger: AGCCGATTTTCGATTGTTTAACCAAACCCAGTTGCATTTGTACAGATCCACGTGTACTGGCACCTCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAAAATGCAGATTCAATaGGGTGGGTTGCATTGGCTT +
Preference number: 3 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKKMQIQ*GGLHWL
Trigger: AAGCCAATGCAACCCACCCAATTGAATCTGCATTTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp TGTATAGAGACTTGTACAGTCCATGATTTGGTCTTCTaGGGTGCCAGTACACGTGGATCTGTACAAATGCAA +
Preference number: 3 (lower is better)
Translates to: CIETCTVHDLVF*GASTRGSVQMQ
Trigger: TTGCATTTGTACAGATCCACGTGTACTGGCACCTCAGAAGACCAAATCATGGACTGTACAAGTCTCTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CCA 72 bp GAGGTGCCAGTACACGTGGATCTGTACAAATGCAACTaGGTTTGGTTAAACAATCGAAAATCGGCTACAATA +
Preference number: 3 (lower is better)
Translates to: EVPVHVDLYKCN*VWLNNRKSATI
Trigger: TATTGTAGCCGATTTTCGATTGTTTAACCAAACCCAGTTGCATTTGTACAGATCCACGTGTACTGGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATTGTCATTATCATCATaGCTTGCTGCCCACAGGGAT +
Preference number: 3 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQLSLSS*LAAHRD
Trigger: ATCCCTGTGGGCAGCAAGCAATGATGATAATGACAA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAACAGCTTACTGTACTaGGTCAATGTAGCATTACAA +
Preference number: 3 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKNSLLY*VNVALQ
Trigger: TTGTAATGCTACATTGACCAAGTACAGTAAGCTGTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACAAGTATATGAGCAGTaGAACAGTTTAGGAAAAGCT +
Preference number: 3 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKQVYEQ*NSLGKA
Trigger: AGCTTTTCCTAAACTGTTCAACTGCTCATATACTTG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGAACAGCCCTTGATATaGTACAAATTCCAGGTGAAA +
Preference number: 3 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQEQPLI*YKFQVK
Trigger: TTTCACCTGGAATTTGTACAATATCAAGGGCTGTTC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp AGAGAGGTAGGGGACAGTGGTAGAATGATTCAGTTGTaGGAATTAAAGGCAATGATAGAGACCATTTTCCAT +
Preference number: 3 (lower is better)
Translates to: REVGDSGRMIQL*ELKAMIETIFH
Trigger: ATGGAAAATGGTCTCTATCATTGCCTTTAATTCTCACAACTGAATCATTCTACCACTGTCCCCTACCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CCA 72 bp CAGCCCTTGATATTGTACAAATTCCAGGTGAAACTATaGGGAGATCCACCTATAGCAATGAAGCACATAATT +
Preference number: 3 (lower is better)
Translates to: QPLILYKFQVKL*GDPPIAMKHII
Trigger: AATTATGTGCTTCATTGCTATAGGTGGATCTCCCCATAGTTTCACCTGGAATTTGTACAATATCAAGGGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAATTTCCTATTAAAGTaGGGGTGTGCTAATTTCTCC +
Preference number: 3 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQNFLLK*GCANFS
Trigger: GGAGAAATTAGCACACCCCAACTTTAATAGGAAATT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACAAATGCAACTGGGTTaGGTTAAACAATCGAAAATC +
Preference number: 3 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQQMQLG*VKQSKI
Trigger: GATTTTCGATTGTTTAACCAAACCCAGTTGCATTTG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCATTATCATCATTGCTaGCTGCCCACAGGGATAAAG +
Preference number: 3 (lower is better)
Translates to: EPSMELFKLNSQILAFQTHYHHC*LPTGIK
Trigger: CTTTATCCCTGTGGGCAGCAAGCAATGATGATAATG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp ATAAATGGCGTTACGATGGAGCACTCAAGAAGTTTTTaGTATTCACTAAATTCACCTTGGTCTGCAGACATC +
Preference number: 3 (lower is better)
Translates to: INGVTMEHSRSF*YSLNSPWSADI
Trigger: GATGTCTGCAGACCAAGGTGAATTTAGTGAATATCAAAAACTTCTTGAGTGCTCCATCGTAACGCCATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 72 bp CCATCTTACAGATATCCTGTTTGTCATTATCATCATTaGTTGCTGCCCACAGGGATAAAGACATTGTATAGA +
Preference number: 3 (lower is better)
Translates to: PSYRYPVCHYHH*LLPTGIKTLYR
Trigger: TCTATACAATGTCTTTATCCCTGTGGGCAGCAAGCAATGATGATAATGACAAACAGGATATCTGTAAGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 72 bp ACTAGTAGCATCCCAATGGTTTTCCAAAAACTTTCATaGCAAAGTACTAAACACTCACCTGATATCCTTATC +
Preference number: 3 (lower is better)
Translates to: TSSIPMVFQKLS*QSTKHSPDILI
Trigger: GATAAGGATATCAGGTGAGTGTTTAGTACTTTGGCATGAAAGTTTTTGGAAAACCATTGGGATGCTACTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTACAGGGATAAAGACATaGTATAGAGACTTGTACAGT +
Preference number: 3 (lower is better)
Translates to: EPSMELFKLNSQILAFQTTGIKT*YRDLYS
Trigger: ACTGTACAAGTCTCTATACAATGTCTTTATCCCTGT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp TGTGAAGAGAATTTTCTTACTCCAGTCATATACTACTaGTATGCCCATTCCAATTATCTACTCAGTGAGCAA +
Preference number: 3 (lower is better)
Translates to: CEENFLTPVIYY*YAHSNYLLSEQ
Trigger: TTGCTCACTGAGTAGATAATTGGAATGGGCATATCAGTAGTATATGACTGGAGTAAGAAAATTCTCTTCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 72 bp AAAACTGTAGTCTGCATATCACCGATGAACTTTTCATaGATGAAACATGCTAGTCAGAGTATTATAGTATCC +
Preference number: 3 (lower is better)
Translates to: KTVVCISPMNFS*MKHASQSIIVS
Trigger: GGATACTATAATACTCTGACTAGCATGTTTCATGCATGAAAAGTTCATCGGTGATATGCAGACTACAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR GCA 72 bp ATCATAAAACACATGCTGAACAACGGAGACATTGTTTaGATCTTGCTTCTTCAGTTCTCTTATGTTTGCAAA +
Preference number: 3 (lower is better)
Translates to: IIKHMLNNGDIV*ILLLQFSYVCK
Trigger: TTTGCAAACATAAGAGAACTGAAGAAGCAAGATGCAAACAATGTCTCCGTTGTTCAGCATGTGTTTTATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR TCA 72 bp TACAAGTACATATTTGTTAATCCATTAGGTGCTTACTaGATGCCAGGCACAATTCTAGAATATGGTGATAGA +
Preference number: 3 (lower is better)
Translates to: YKYIFVNPLGAY*MPGTILEYGDR
Trigger: TCTATCACCATATTCTAGAATTGTGCCTGGCATTCAGTAAGCACCTAATGGATTAACAAATATGTACTTGTA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAGCGCGGGCCCGCGGTaGTGCACGTGCGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITSAGPR*CTCACG
Trigger: CCCACACGCGCACGTGCATCACCGCGGGCCCGCGCT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGGCTCCGCAAGTGGTaGCTTTCCCGCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITGLRKW*LSRLSS
Trigger: GGAGGAGAGGCGGGAAAGCCACCACTTGCGGAGCCC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGAGGCGGGTGGATCATaGGGTCAGGAGTTCGATACC +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITEAGGS*GQEFDT
Trigger: GGTATCGAACTCCTGACCTCATGATCCACCCGCCTC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACCCAGATCAGAGATCTaGAGGTTGCAAGAGCACGCG +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITPRSEI*RLQEHA
Trigger: CGCGTGCTCTTGCAACCTGCAGATCTCTGATCTGGG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTCGCGGGGGCCCCGGTaGTATTCAACCGGACCGCAG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGSRGPR*YSTGPQ
Trigger: CTGCGGTCCGGTTGAATAGCACCGGGGCCCCCGCGA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAATCCTCTACGGAGTTaGCCTCTCGGGAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITNPLRS*PLGSGR
Trigger: TCTACCGCTCCCGAGAGGGCAACTCCGTAGAGGATT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAAGGCACCGGGGATTTaGTCTGATAGGCGATGCTGG +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITKAPGI*SDRRCW
Trigger: CCAGCATCGCCTATCAGACCAAATCCCCGGTGCCTT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATGGGATTGTAGGGCTTaGGCTGCAGTTCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITWDCRA*AAVQRC
Trigger: GCATCGCTGAACTGCAGCCCAAGCCCTACAATCCCA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAGACGCCTGAGGGCATaGCCTGCAGGAGGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITRRLRA*PAGGCY
Trigger: ATAACAACCTCCTGCAGGCCATGCCCTCAGGCGTCT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATCACTGGCAAGGAGGTaGAGTGGTTACTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITSLARR*SGYSSG
Trigger: ACCTGAGGAGTAACCACTTCACCTCCTTGCCAGTGA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGCAGGTCGATTTGGATaGGTGACTTCAGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITAGRFG*VTSAGP
Trigger: TGGACCAGCTGAAGTCACTCATCCAAATCGACCTGC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATGGTCTGATAGGCGATaGTGGGGCCATAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITWSDRR*WGHSCC
Trigger: ACAGCAACTATGGCCCCAGCATCGCCTATCAGACCA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGTAGATGGGGTTTTTaGACATGTGGCCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITGRWGF*TCGPVG
Trigger: ACCCACTGGGCCACATGTGCAAAAACCCCATCTACC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATCACCCAGGCTGGAGTaGAGTATCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITSPRLE*SITISA
Trigger: AGCTGAGATCGTGATACTGCACTCCAGCCTGGGTGA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATGTGTGAGTGCACCCTaGAATGGGACGATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITCVSAP*NGTMSC
Trigger: GCAAGACATCGTCCCATTGCAGGGTGCACTCACACA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCAGGAGTCACGGCGCTaGTCCTCGCAGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGQESRR*SSQGPG
Trigger: TCCAGGTCCCTGCGAGGACCAGCGCCGTGACTCCTG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGCACATGTGGCCCAGTaGGTGGGGGATGTATTCATA +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITAHVAQ*VGDVFI
Trigger: TATGAATACATCCCCCACCCACTGGGCCACATGTGC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGGGGCTCGATGGTGCTaGCGCTGTAGGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKGARWC*RCRRGS
Trigger: GGAGCCCCGCCTACAGCGTCAGCACCATCGAGCCCC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAAGTCCTTAGAGGGCTaGCGAGAGGTGGGGCGCACC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGKSLEG*REVGRT
Trigger: GGTGCGCCCCACCTCTCGGCAGCCCTCTAAGGACTT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACTGTTCCAAAGTTACTaGGGGGCAGCAAGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITLFQSY*GAASVH
Trigger: ATGCACACTTGCTGCCCCCCAGTAACTTTGGAACAG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACAAGAGGTGGTAGATTaGGAAACGGGGAGGGCTAAT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITQEVVD*ETGRAN
Trigger: ATTAGCCCTCCCCGTTTCCCAATCTACCACCTCTTG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCTGGGCTTGTTGGGTTaGCGAGTCCCCTTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLGLLG*RVPLGG
Trigger: GCCCCCTAAGGGGACTCGCCAACCCAACAAGCCCAG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATCCTCCTCCCCGGGCTaGAGCTGCAGCTGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQSSSPG*SCSCGG
Trigger: CCCGCCGCAGCTGCAGCTGCAGCCCGGGGAGGAGGA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACAGAAATTGCACCACTaGACTCCAGCCTGGATAACA +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITQKLHH*TPAWIT
Trigger: TGTTATCCAGGCTGGAGTGCAGTGGTGCAATTTCTG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGATTACTTCTTGCCTTaGACCCTGAGCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITDYFLP*TLSFWD
Trigger: ATCCCAGAAGCTCAGGGTGCAAGGCAAGAAGTAATC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAGGGCTGCCGAGAGGTaGGGCGCACCCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKRAAER*GAPWAC
Trigger: ACAAGCCCAGGGTGCGCCCCACCTCTCGGCAGCCCT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATCATGCAGGTCGATTTaGATGAGTGACTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITSCRSI*MSDFSW
Trigger: CCAGCTGAAGTCACTCATCCAAATCGACCTGCATGA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACGGGCGTCTTCACCTTaGGCAGCGCGGGCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQRASSP*AARARG
Trigger: ACCGCGGGCCCGCGCTGCCCAAGGTGAAGACGCCCG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAGGTGGGGGCTGTGGTaGGCAGAAATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGRWGLW*AEIAPL
Trigger: CAGTGGTGCAATTTCTGCTCACCACAGCCCCCACCT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATTGGTGATGTTTTCGTaGCCAGAAATATGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITLVMFS*PEICPR
Trigger: CCTAGGGCATATTTCTGGTCACGAAAACATCACCAA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCCCGGAGGTCCAAGTaGGTTAAGGGCACAAAACGG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPRRSK*VKGTKR
Trigger: CCGTTTTGTGCCCTTAACGCACTTGGACCTCCGGGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGGCTGAATAGGAGATaGTGTCCAACCAATCCTTTA +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITGLNRR*CPTNPL
Trigger: TAAAGGATTGGTTGGACAGCATCTCCTATTCAGCCC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACCGGTTCCCGTAGCCTaGTGTCCCCTGCCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQPVPVA*CPLPPG
Trigger: ACCCGGGGGCAGGGGACAGCAGGCTACGGGAACCGG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACCCTGTGTAGGCAACTaGCCTGAGGAATGTATTATT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITPCVGN*PEECII
Trigger: AATAATACATTCCTCAGGGCAGTTGCCTACACAGGG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTCACTGACGCCGGGGTaGTGTGTAAATACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGSLTPG*CVNTPW
Trigger: CCACGGGGTATTTACACACCACCCCGGCGTCAGTGA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAGGTGCCAGTACACGTaGATCTGTACAAATGCAACT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITRCQYT*ICTNAT
Trigger: AGTTGCATTTGTACAGATCCACGTGTACTGGCACCT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAGTACAGTCCATGATTTaGTCTTCTGAGGTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITVQSMI*SSEVPV
Trigger: TACTGGCACCTCAGAAGACCAAATCATGGACTGTAC...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAATAATCGATGGTTTCTaGACACGAAAGGACGAGAGA +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITIIDGF*TRKDER
Trigger: TCTCTCGTCCTTTCGTGTGCAGAAACCATCGATTAT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAAGCGGTCGGCGTCCTaGACCGGCGACAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQKRSAS*TGDSRS
Trigger: GGACCTGCTGTCGCCGGTGCAGGACGCCGACCGCTT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCTGGTGTGGTCGCTCTaGTTCTTCTTCCTGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLVWSL*FFFLRF
Trigger: GAAGCGCAGGAAGAAGAACCAGAGCGACCACACCAG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGCTGCAGTTCAGCGATaGTCTCGATCTTTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGAAVQR*SRSFAP
Trigger: AGGAGCGAAAGATCGAGAGCATCGCTGAACTGCAGC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCTGAGGGCATGGCCTaGAGGAGGTTGTTATTCAAG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPEGMA*RRLLFK
Trigger: CTTGAATAACAACCTCCTGCAGGCCATGCCCTCAGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTGCGGCGGGGGCTGCTaGTGTGGCTGCTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTCGGGC*CGCCGG
Trigger: GCCACCGCAGCAGCCACAGCAGCAGCCCCCGCCGCA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTGTGTAAATACCCCGTaGTGCTCAAAGGCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGCVNTP*CSKASA
Trigger: CGCAGACGCCTTTGAGCACCACGGGGTATTTACACA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAGGTGGGGCGCACCCTaGGCTTGTTGGGTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQRWGAP*ACWVGE
Trigger: CTCGCCAACCCAACAAGCCCAGGGTGCGCCCCACCT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTCGATCTTTCGCTCCTaGCAGTTTACGTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGSIFRS*QFTLRP
Trigger: GGGCCTCAACGTAAACTGCCAGGAGCGAAAGATCGA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGGCTGCACGGGAATTTaGGATATTCCGGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGGCTGI*DIPGGY
Trigger: ATAGCCTCCCGGAATATCCCAAATTCCCGTGCAGCC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAAATCTGAAGATGAGTaGGTATTGCTAACATCTTGC +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITKSEDE*VLLTSC
Trigger: GCAAGATGTTAGCAATACTCACTCATCTTCAGATTT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACGTCGGAGTTGTTGGTaGTGGTGTGGTCGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKRRSCW*WCGRSG
Trigger: ACCAGAGCGACCACACCAGCACCAACAACTCCGACG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCTCATGGGTGAATGCTaGCTCTTTGTGGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLMGEC*LFVAEC
Trigger: GCATTCTGCCACAAAGAGGCAGCATTCACCCATGAG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAATTGCTAAAAGTATGTaGTGCTCCTTCCTTCTAATC +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITIAKSM*CSFLLI
Trigger: GATTAGAAGGAAGGAGCAGCACATACTTTTAGCAAT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCAGCAGAGGAAGAAGTaGCCACAGAATTCACTGACG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGQQRKK*PQNSLT
Trigger: CGTCAGTGAATTCTGTGGCCACTTCTTCCTCTGCTG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGTCCTCGCAGGGACCTaGATAGAGGAGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQVLAGT*IEEGVG
Trigger: GCCCACACCCTCCTCTATCCAGGTCCCTGCGAGGAC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGGGTTTTTGCACATGTaGCCCAGTGGGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKGFLHM*PSGWGM
Trigger: CATCCCCCACCCACTGGGCCACATGTGCAAAAACCC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATCTTCCTGCGCTTCATaGCCAGCACGAAGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQSSCAS*PARRAR
Trigger: CCGGGCTCTTCGTGCTGGTCATGAAGCGCAGGAAGA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACCCGGGTGCAAATACTaGTGGGGGCGTCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQPGCKY*WGRLRS
Trigger: TGACCTGAGACGCCCCCATCAGTATTTGCACCCGGG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACCAGGAAGTCTGTCCTaGGCACGACAGCGATGTAGT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKPGSLS*ARQRCS
Trigger: ACTACATCGCTGTCGTGCGCAGGACAGACTTCCTGG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAGCTTCTGTGTATGCTaGAATTATAATTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITSFCVC*NYNFPS
Trigger: AGAAGGGAAATTATAATTGCAGCATACACAGAAGCT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGTGGGTGTGTGTGAGTaGACCCTGCAATGGGACGAT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKVGVCE*TLQWDD
Trigger: ATCGTCCCATTGCAGGGTGCACTCACACACACCCAC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATCACGTCGGAGTTGTTaGTGCTGGTGTGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKSRRSC*CWCGRS
Trigger: AGAGCGACCACACCAGCACCAACAACTCCGACGTGA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACTCGGGAGCGGTAGATaGGGTTTTTGCACATGTGGC +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLGSGR*GFCTCG
Trigger: GCCACATGTGCAAAAACCCCATCTACCGCTCCCGAG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGCGGGGCTCCGCAAGTaGTGGCTTTCCCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTAGLRK*WLSRLS
Trigger: GGAGAGGCGGGAAAGCCACCACTTGCGGAGCCCCGC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAAATGCAACTGGGTTTaGTTAAACAATCGAAAATCG +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITKCNWV*LNNRKS
Trigger: CGATTTTCGATTGTTTAACCAAACCCAGTTGCATTT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACATTTTCACAGTACGTGTaGATGTTCTCATTACAAACT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITFSQYV*MFSLQT
Trigger: AGTTTGTAATGAGAACATCCACACGTACTGTGAAAA...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACTAGTAGCATCCCAATaGTTTTCCAAAAACTTTCAT +
Preference number: 4 (lower is better)
Translates to: CNRCLRVQASASRVAGITLVASQ*FSKNFH
Trigger: ATGAAAGTTTTTGGAAAACCATTGGGATGCTACTAG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGGCGCCTCAGGTTGGTaGGATCCCCGAAAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTGASGW*DPRKRG
Trigger: ACCGCGCTTTCGGGGATCTCACCAACCTGAGGCGCC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCGCAAGAAGAGAAAGTaGTGTGCCCAGTTTACACAA +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGRKKRK*CAQFTQ
Trigger: TTGTGTAAACTGGGCACATCACTTTCTCTTCTTGCG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCATTAGGTGCTTACTaGATGCCAGGCACAATTCTA +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPLGAY*MPGTIL
Trigger: TAGAATTGTGCCTGGCATTCAGTAAGCACCTAATGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTGTAGGCAACTGCCCTaGGGAATGTATTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGCRQLP*GMYYSF
Trigger: GAAGGAATAATACATTCCTCAGGGCAGTTGCCTACA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACTAGTCTGGAACCCCTaGCCTCAAGTGATTCACCAG +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLVWNP*PQVIHQ
Trigger: CTGGTGAATCACTTGAGGTCAGGGGTTCCAGACTAG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACAGAGATCTGCAGGTTaGAAGAGCACGCGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQQRSAG*KSTRWD
Trigger: GTCCCACCGCGTGCTCTTGCAACCTGCAGATCTCTG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACCTGGATCATCGAGATaGGGTTATTCCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKPGSSR*GYSPGA
Trigger: TGCACCTGGGGAATAACCGCATCTCGATGATCCAGG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGGCGGCTGCTGCTGCTaGTGCAGGTGGTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTGGCCC*CRWWLL
Trigger: CAGCAACCACCACCTGCAGCAGCAGCAGCAGCCGCC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTATTCCGGGAGGCTATTaGCGGCGGGGGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTIPGGY*RRGWWS
Trigger: GCTCCACCACCCCCGCCGGCAATAGCCTCCCGGAAT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGTGGTGAGCAGAAATTaGACCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKVVSRN*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAATTTCTGCTCACCAC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAGTATCCCAAAGATGTaGATGTTGGGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGSIPKM*MLGSSV
Trigger: CACCGATGAACCCAACATGCACATCTTTGGGATACT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCGGTCTCAATGTCCTaGATAACATTGCTACCTAGA +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPVSMS*ITLLPR
Trigger: TCTAGGTAGCAATGTTATCCAGGACATTGAGACCGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGGCAAAGTTCCTGCTTaGATACCTCGTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKGKVPA*IPRPSP
Trigger: GGGACTTGGACGAGGTATCCAAGCAGGAACTTTGCC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGGAGGTCCAGCCCCGTaGCCTCCAGGAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTGGPAP*PPGSLS
Trigger: GGACAGACTTCCTGGAGGCCACGGGGCTGGACCTCC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAATCCCCCACCAGGGCTaGATAGGAGATGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQIPHQG*IGDAVQ
Trigger: TTGGACAGCATCTCCTATTCAGCCCTGGTGGGGGAT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCTCTTGGTTACCATGTaGAAAACCCACACAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLLVTM*KTHTSV
Trigger: AACACTTGTGTGGGTTTTTCACATGGTAACCAAGAG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCTACATTTTCTACTTaGTTGGCAGGCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPTFST*LAGFIF
Trigger: GAAGATGAAGCCTGCCAATCAAGTAGAAAATGTAGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTTGAGGATAAGCACCTaGAACAAATGCAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLRIST*NKCSFP
Trigger: TGGGAAACTGCATTTGTTGCAGGTGCTTATCCTCAA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACTTGGGCAAAGTTCCTaGTTGGATACCTCGTCCAAG +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLGQSS*LDTSSK
Trigger: CTTGGACGAGGTATCCAAGCAGGAACTTTGCCCAAG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCGGTTATTCCCCAGGTaGAGGAGGTCCAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTRLFPR*RRSSPV
Trigger: CACGGGGCTGGACCTCCTGCACCTGGGGAATAACCG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAACGCCCACTTTGAGCTaGTCCACCCACAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQTPTLS*STHSFM
Trigger: CATGAAGCTGTGGGTGGAGCAGCTCAAAGTGGGCGT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATGTAAGCAGCGGGGCTaGACGGGAATTTGGGATATT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKCKQRG*TGIWDI
Trigger: AATATCCCAAATTCCCGTGCAGCCCCGCTGCTTACA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTGTCTGTGTGGGGTATaGAAGTTCTTCCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGCLCGV*KFFLCS
Trigger: AGAACATAGGAAGAACTTGCATACCCCACACAGACA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCCCATAATAATCGATaGTTTCTGCACACGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPHNNR*FLHTKG
Trigger: TCCTTTCGTGTGCAGAAACCATCGATTATTATGGGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATTGTTGGTGCTGGTGTaGTCGCTCTGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLLVLV*SLWFFF
Trigger: GAAGAAGAACCAGAGCGACCACACCAGCACCAACAA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCTTCCTATGTTCTCATaGGTTTTCTCTAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLPMFS*VFSKHS
Trigger: GGAGTGCTTAGAGAAAACCCATGAGAACATAGGAAG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGTCGATTTGGATGAGTaGCTTCAGCTGGTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKVDLDE*LQLVQN
Trigger: GTTTTGGACCAGCTGAAGTCACTCATCCAAATCGAC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTTGAAAATGCCTTCCTaGTACCACGTCAGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLKMPS*YHVSFR
Trigger: TCTAAAACTGACGTGGTATCAGGAAGGCATTTTCAA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAGCTTTGATAAACTCTaGGCTCCCCAAGAACAATAT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGSFDKL*APQEQY
Trigger: ATATTGTTCTTGGGGAGCTCAGAGTTTATCAAAGCT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTTTAAACTCTTCCACTaGAATATACGTGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGFKLFH*NIRAVS
Trigger: GCTGACTGCACGTATATTTCAGTGGAAGAGTTTAAA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAAAAGACAGACACACTaGTGTTCTCATGTTAGCACT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGKRQTH*CSHVST
Trigger: AGTGCTAACATGAGAACATCAGTGTGTCTGTCTTTT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGCAAACGCTAGAGTCTaGAGCATCCAGCTATGCATT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKANARV*SIQLCI
Trigger: AATGCATAGCTGGATGCTGCAGACTCTAGCGTTTGC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCGATGAACTTTTCATaGATGAAACATGCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPMNFS*MKHASQ
Trigger: CTGACTAGCATGTTTCATGCATGAAAAGTTCATCGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACAAACAGAAAAACCCTaGAGGGACCACTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKQTEKP*RDHCLC
Trigger: ACACAGACAGTGGTCCCTGCAGGGTTTTTCTGTTTG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGCTAAAAGTATGTGCTaGTCCTTCCTTCTAATCTTC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGAKSMC*SFLLIF
Trigger: GAAGATTAGAAGGAAGGAGCAGCACATACTTTTAGC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATCTGATAGGCGATGCTaGGGCCATAGTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQSDRRC*GHSCCS
Trigger: GCTACAGCAACTATGGCCCCAGCATCGCCTATCAGA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTGCAAGAGCACGCGGTaGGACACTCCAAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTCKSTR*DTPKAP
Trigger: CGGTGCCTTTGGAGTGTCCCACCGCGTGCTCTTGCA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAATGTGGCCCAGTGGGTaGGGGATGTATTCATACACG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQMWPSG*GMYSYT
Trigger: CGTGTATGAATACATCCCCCACCCACTGGGCCACAT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTGCCGGCGGGGGTGGTaGAGCAGTGTTTGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTCRRGW*SSVCLV
Trigger: AACCAGACAAACACTGCTCCACCACCCCCGCCGGCA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATGTGCTAGTAAGCCATaGTCTGCTAAAACCGGAGGA +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKCASKP*SAKTGG
Trigger: TCCTCCGGTTTTAGCAGACCATGGCTTACTAGCACA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCTTATGTCAAGATAAATaGCGTTACGATGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLCQDK*RYDGAL
Trigger: GAGTGCTCCATCGTAACGCCATTTATCTTGACATAA...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGGCCCAGAGTACACATaGAAGAGTATGAAAATTCAT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGGPEYT*KSMKIH
Trigger: ATGAATTTTCATACTCTTCCATGTGTACTCTGGGCC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCATTTTCTACTTGATTaGCAGGCTTCATCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGHFLLD*QASSSM
Trigger: CATGGAAGATGAAGCCTGCCAATCAAGTAGAAAATG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACATGATTTGGTCTTCTaGGGTGCCAGTACACGTGGA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQHDLVF*GASTRG
Trigger: TCCACGTGTACTGGCACCTCAGAAGACCAAATCATG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCAGTCATATACTACTaGTATGCCCATTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPVIYY*YAHSNY
Trigger: ATAATTGGAATGGGCATATCAGTAGTATATGACTGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATCAGGAGTTACCACATaGGTCATCAGTCGGCAACCA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQSGVTT*VISRQP
Trigger: TGGTTGCCGACTGATGACTCATGTGGTAACTCCTGA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCATCCTTATCGACATTTaGGCCATCTTTGCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGILIDI*AIFAVY
Trigger: ATAAACTGCAAAGATGGCTCAAATGTCGATAAGGAT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGAGTGTGGGTGTGTGTaGGTGCACCCTGCAATGGGA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTECGCV*VHPAMG
Trigger: TCCCATTGCAGGGTGCACTCACACACACCCACACTC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATTCCTCACAAGGACATaGATTGTCACAGATTTCCCC +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKFLTRT*IVTDFP
Trigger: GGGGAAATCTGTGACAATGCATGTCCTTGTGAGGAA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGTAAATACCCCGTGGTaGTCAAAGGCGTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTVNTPW*SKASAA
Trigger: GGCCGCAGACGCCTTTGAGCACCACGGGGTATTTAC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACCGTACACGCTGTACTaGATGTTAAAGGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQPYTLY*MLKELT
Trigger: CGTGAGCTCCTTTAACATGCAGTACAGCGTGTACGG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAGACACAAAGAAAGTTaGCAAAGACACACCATCAAT +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGRHKES*QRHTIN
Trigger: ATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTACGATCTCAGCTCACTaGAACCGCTGCCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTTISAH*NRCLRV
Trigger: AACCCGGAGGCAGCGGTTGCAGTGAGCTGAGATCGT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATCGAGATTGCACCATTaGACTGAAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQSRLHH*TEAWVT
Trigger: TGTCACCCAGGCTTCAGTGCAATGGTGCAATCTCGA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGGCAAGGAGGTGAAGTaGTTACTCCTCAGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQGKEVK*LLLRFS
Trigger: GCTAAACCTGAGGAGTAACCACTTCACCTCCTTGCC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAATGAGTGACTTCAGCTaGTCCAAAACTCCACTCACT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKMSDFS*SKTPLT
Trigger: AGTGAGTGGAGTTTTGGACCAGCTGAAGTCACTCAT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTATTGCCGGCGGGGGTaGTGGAGCAGTGTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTYCRRG*WSSVCL
Trigger: CAGACAAACACTGCTCCACCACCCCCGCCGGCAATA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAATCCTCCGGGAAACTaGTACCACCTGTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQNPPGN*YHLFNL
Trigger: CAGGTTGAACAGGTGGTACCAGTTTCCCGGAGGATT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAACTGAATCTCGCGGATaGGATTGTACTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQTESRG*DCTGGR
Trigger: TCTTCCTCCAGTACAATCTCATCCGCGAGATTCAGT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTCCTCAGGTTTAGCCTaGGGAGGGTCAAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTSSGLA*GGSSQR
Trigger: TCTCTGGCTTGACCCTCCTCAGGCTAAACCTGAGGA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAAACCAGCAGGAGGCTaGGAATTAACACAGACAAGG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQKPAGG*ELTQTR
Trigger: CCTTGTCTGTGTTAATTCTCAGCCTCCTGCTGGTTT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTATCTTCCACCGAAGCTaGGAAATCCCGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTIFHRS*EIPCQG
Trigger: GCCTTGGCACGGGATTTCTCAGCTTCGGTGGAAGAT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGGTGAGGAACAGACTTaGGTTCCCAGGAAATTTGTC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQGEEQT*VPRKFV
Trigger: GACAAATTTCCTGGGAACTCAAGTCTGTTCCTCACC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCTGCCACTTCCCTTATaGTGTCCAGGGGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTLPLPL*CPGAVR
Trigger: TCTCACAGCCCCTGGACATCATAAGGGAAGTGGCAG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGGCAGGTGGATCACCTaGAGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTGRWIT*SQEFKT
Trigger: GGTCTTGAACTCCTGACTTCAGGTGATCCACCTGCC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAACATTGCTACCTAGATaGAAAATTGAAGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKTLLPR*KIEAPV
Trigger: CACTGGGGCTTCAATTTTGCATCTAGGTAGCAATGT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAGCACCTGCAACAAATaGAGTTTCCCAAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKSTCNK*SFPKAL
Trigger: CAATGCTTTTGGGAAACTGCATTTGTTGCAGGTGCT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCTATGTTACATACAGTaGATGAAAGGAATAGGACAA +
Preference number: 4 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGLCYIQ*MKGIGQ
Trigger: TTGTCCTATTCCTTTCATGCACTGTATGTAACATAG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAAACCCCGTAGCCCATaGAAAGCCCCGGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTKPRSP*KAPVSM
Trigger: CATTGAGACCGGGGCTTTCCATGGGCTACGGGGTTT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCCGAAAGCGCGGTCCTaGATCATCGAGATGCGGTTA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTPKARS*IIEMRL
Trigger: TAACCGCATCTCGATGATCCAGGACCGCGCTTTCGG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACGGATGAGATTGTACTaGAGGAAGAGATACTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQRMRLY*RKRYCR
Trigger: CCTGCAGTATCTCTTCCTCCAGTACAATCTCATCCG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTATGTATTCATACACGTaGCCCGCGGGCGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTMYSYT*PAGVFT
Trigger: GGTGAAGACGCCCGCGGGCCACGTGTATGAATACAT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCTCCCTCACCCAGGCTaGAGTGCAGTATCACGATCT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTLPHPG*SAVSRS
Trigger: AGATCGTGATACTGCACTCCAGCCTGGGTGAGGGAG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCCTGGCAGTTTACGTTaGGGCCCAGATCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTPGSLR*GPDQRS
Trigger: AGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATCAAAAGTTCCAGACTaGATCTCGCGGATGAGATTG +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQSKVPD*ISRMRL
Trigger: CAATCTCATCCGCGAGATTCAGTCTGGAACTTTTGA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATGTACAAATTCCAGGTaGAACTATGGGGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQCTNSR*NYGEIH
Trigger: GTGGATCTCCCCATAGTTTCACCTGGAATTTGTACA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAACTTCCTGCTGCTGTaGAGAATAATACCAATCTCA +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKNFLLL*RIIPIS
Trigger: TGAGATTGGTATTATTCTTCACAGCAGCAGGAAGTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAAAACCGTATTCACTTaGCAAAGCATAGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKKTVFT*QSIACN
Trigger: ATTGCAGGCTATGCTTTGTCAAGTGAATACGGTTTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAACTATCCCCTTAAGATaGAAACCGTATTCACTTGAC +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKTIPLR*KPYSLD
Trigger: GTCAAGTGAATACGGTTTTCATCTTAAGGGGATAGT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAGCTACTTGGGAGGCTaGGGCAGGAGAATCACTAGA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTSYLGG*GRRITR
Trigger: TCTAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAACGGAGACATTGTTTaGATCTTGCTTCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKNGDIV*ILLLQF
Trigger: GAACTGAAGAAGCAAGATGCAAACAATGTCTCCGTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGATATTCGTTCCGGTTaGGTTCTACAAAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQDIRSG*VLQRQH
Trigger: GTGCTGTCTTTGTAGAACCCAACCGGAACGAATATC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CAA 72 bp GCCAGTACACGTGGATCTGTACAAATGCAACTGGGTTaGGTTAAACAATCGAAAATCGGCTACAATAGTAGT +
Preference number: 4 (lower is better)
Translates to: ASTRGSVQMQLG*VKQSKIGYNSS
Trigger: ACTACTATTGTAGCCGATTTTCGATTGTTTAACCAAACCCAGTTGCATTTGTACAGATCCACGTGTACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATGTCCACATCTATGGTaGTCCTTTACAGGATCACAA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQCPHLW*SFTGSQ
Trigger: TTGTGATCCTGTAAAGGATCACCATAGATGTGGACA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAACCTTATTCAAAGATaGCGAGCTCATATACACCAT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKNLIQR*RAHIHH
Trigger: ATGGTGTATATGAGCTCGTCATCTTTGAATAAGGTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACATGACAGACAGAGATaGTATCTCACATGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQHDRQR*YLTWLL
Trigger: AAGAAGCCATGTGAGATATCATCTCTGTCTGTCATG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTACCCTCTTTGGGGTATaGACTAGGTTTCTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTTLFGV*TRFLKP
Trigger: GGGCTTGAGAAACCTAGTGCATACCCCAAAGAGGGT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACTCTTTGTGGCAGAATaGCATGGAAATTGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLFVAE*HGNCSL
Trigger: TAAAGAACAATTTCCATGGCATTCTGCCACAAAGAG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACTGTACAAATGCAACTaGGTTTGGTTAAACAATCGA +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLYKCN*VWLNNR
Trigger: TCGATTGTTTAACCAAACCCAGTTGCATTTGTACAG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACACACCATCAATCTGTaGTGGACAAAGAAACTTAAT +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKHTINL*WTKKLN
Trigger: ATTAAGTTTCTTTGTCCACCACAGATTGATGGTGTG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAGGAGGGTGTGGGCGTaGAAACTACTACATCTGAAT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTRRVWA*KLLHLN
Trigger: ATTCAGATGTAGTAGTTTCCACGCCCACACCCTCCT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGCAGATTCAATTGGGTaGGTTGCATTGGCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQADSIG*VALAFK
Trigger: TTTAAAAGCCAATGCAACCCACCCAATTGAATCTGC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAATGTTATCATTAATCTaGAGTCATGTGACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKMLSLI*SHVTLG
Trigger: TCCCAAAGTCACATGACTCCAGATTAATGATAACAT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGGTGAGTTATTGTCTTaGAGGCCTACATTTTCTACT +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQGELLS*RPTFST
Trigger: AGTAGAAAATGTAGGCCTCCAAGACAATAACTCACC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CAA 72 bp TTCCAGGTATCTTGCCATGCCTGCAAATATCTTAAATaGGAGCCATCTGAAAAGTGCAAGAAGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: FQVSCHACKYLK*EPSEKCKKSTF
Trigger: AAATGTGCTCTTCTTGCACTTTTCAGATGGCTCCAATTTAAGATATTTGCAGGCATGGCAAGATACCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACGGGATCATATTCGTTaGAAATGCCTGAAAATTTCA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQRDHIR*KCLKIS
Trigger: TGAAATTTTCAGGCATTTTCAACGAATATGATCCCG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTTTCTCATGGGTGAATaGTGCCTCTTTGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTFLMGE*CLFVAE
Trigger: TTCTGCCACAAAGAGGCAGCATTCACCCATGAGAAA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAATGCACCCATATATATaGTCATGGTCACTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQMHPYI*SWSLAL
Trigger: TAAAGCTAGTGACCATGAGCATATATATGGGTGCAT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCCACTGAAATATACGTaGAGTCAGCCCCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTPLKYT*SQPQRK
Trigger: TTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCCCCTTCTGGCTTGTTaGAATACAAGAGTTACCAGA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTPLLAC*NTRVTR
Trigger: TCTGGTAACTCTTGTATTGCAACAAGCCAGAAGGGG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATGTGGCAGAATGCCATaGAAATTGTTCTTTAAACAC +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQCGRMP*KLFFKH
Trigger: GTGTTTAAAGAACAATTTCCATGGCATTCTGCCACA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CAA 72 bp TCTTACAGATATCCTGTTTGTCATTATCATCATTGCTaGCTGCCCACAGGGATAAAGACATTGTATAGAGAC +
Preference number: 4 (lower is better)
Translates to: SYRYPVCHYHHC*LPTGIKTLYRD
Trigger: GTCTCTATACAATGTCTTTATCCCTGTGGGCAGCAAGCAATGATGATAATGACAAACAGGATATCTGTAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTATGTGGGGGATGTCATaGATTTGCCTTAGGATATTC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTMWGMS*ICLRIF
Trigger: GAATATCCTAAGGCAAATTCATGACATCCCCCACAT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAACGGAAAAGATTGTTaGGTAAACTGGACAAAAGAT +
Preference number: 4 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQNGKDC*VNWTKD
Trigger: ATCTTTTGTCCAGTTTACCCAACAATCTTTTCCGTT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAGAAATAAGTCTCCTTaGGCAAAGTTCCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTRNKSP*AKFLLG
Trigger: TCCAAGCAGGAACTTTGCCCAAGGAGACTTATTTCT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCTGTCAATTTTCTCATaGGTGAATGCTGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTLSIFS*VNAASL
Trigger: CAAAGAGGCAGCATTCACCCATGAGAAAATTGACAG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CAA 72 bp TTCTTTAAACACAAAGTTCATGAACAGCCCTTGATATaGTACAAATTCCAGGTGAAACTATGGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: FFKHKVHEQPLI*YKFQVKLWGDP
Trigger: TGGATCTCCCCATAGTTTCACCTGGAATTTGTACAATATCAAGGGCTGTTCATGAACTTTGTGTTTAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGATCCTAATACAGTGTaGCACCTCTGCAAAATCATA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTDPNTV*HLCKII
Trigger: TATGATTTTGCAGAGGTGTCACACTGTATTAGGATC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCTCTTGTCAAGTATATaGGCAGTTGAACAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTLLSSI*AVEQFR
Trigger: CCTAAACTGTTCAACTGCTCATATACTTGACAAGAG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTCACTAAATTCACCTTaGTCTGCAGACATCTACAAG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTSLNSP*SADIYK
Trigger: CTTGTAGATGTCTGCAGACCAAGGTGAATTTAGTGA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTATGTTGCAAAGAATATaGACAGCTTACTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTMLQRI*TAYCTW
Trigger: CCAAGTACAGTAAGCTGTTCATATTCTTTGCAACAT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTTAATGAGAAAAATGTaGGACTCCAAGCGTCTAATC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTLMRKM*DSKRLI
Trigger: GATTAGACGCTTGGAGTCTCACATTTTTCTCATTAA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR TCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTCTGTTCTGAAAACATaGCAGACAGAGATGATATCT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTSVLKT*QTEMIS
Trigger: AGATATCATCTCTGTCTGTCATGTTTTCAGAACAGA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTACCTCTTAAATTACTaGTGCCACTTCCCTTATGAT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTYLLNY*CHFPYD
Trigger: ATCATAAGGGAAGTGGCAGCAGTAATTTAAGAGGTA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAAATTCACCTTGGTCTaGAGACATCTACAAGTACAT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTKFTLV*RHLQVH
Trigger: ATGTACTTGTAGATGTCTGCAGACCAAGGTGAATTT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAAATGTGGGTACTCATaGACAAGAATATCCACATTC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTKCGYS*TRISTF
Trigger: GAATGTGGATATTCTTGTGCATGAGTACCCACATTT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
3UTR CAA 72 bp TATCATAAAACACATGCTGAACAACGGAGACATTGTTaGCATCTTGCTTCTTCAGTTCTCTTATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: YHKTHAEQRRHC*HLASSVLLCLQ
Trigger: TTGCAAACATAAGAGAACTGAAGAAGCAAGATGCAAACAATGTCTCCGTTGTTCAGCATGTGTTTTATGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTTATTATTGTTTAGATaGAATCTCCTCAAACCCCGT +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTLLLFR*NLLKPR
Trigger: ACGGGGTTTGAGGAGATTGCATCTAAACAATAATAA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR GCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCCATATACAGACAAATaGCAAAATCCTTGTACAACA +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTPYTDK*QNPCTT
Trigger: TGTTGTACAAGGATTTTGGCATTTGTCTGTATATGG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CCA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAATTCATACTACTCTTaGTTACCATGTGAAAAACCC +
Preference number: 4 (lower is better)
Translates to: EPSMELFKLNSQILAFQTNSYYS*LPCEKP
Trigger: GGGTTTTTCACATGGTAACCAAGAGTAGTATGAATT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS TCA 90 bp ACGTGGCCCGCGGGCGTCTTCACCTTGGGCAGCGCGGGCCCGCGGTaGTGCACGTGCGCGTGTGGGTGGCCGCCCGTGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: TWPAGVFTLGSAGPR*CTCACGWPPVPPPP
Trigger: CGGCGGCGGCGGCACGGGCGGCCACCCACACGCGCACGTGCATCACCGCGGGCCCGCGCTGCCCAAGGTGAAGACGCCCGCGGGCCACGT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 90 bp CGCCTCTCCTCCTCCCCGGGCTGCAGCTGCAGCTGCGGCGGGGGCTaGTGCTGTGGCTGCTGCGGTGGCGGCGGCGGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RLSSSPGCSCSCGGG*CCGCCGGGGGCCCC
Trigger: GCAGCAGCAGCAGCCGCCGCCGCCACCGCAGCAGCCACAGCAGCAGCCCCCGCCGCAGCTGCAGCTGCAGCCCGGGGAGGAGGAGAGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 90 bp CTTCACCTTGGGCAGCGCGGGCCCGCGGTGATGCACGTGCGCGTGTaGGTGGCCGCCCGTGCCGCCGCCGCCGCCGTACACGCTGTACTG +
Preference number: 5 (lower is better)
Translates to: LHLGQRGPAVMHVRV*VAARAAAAAVHAVL
Trigger: CAGTACAGCGTGTACGGCGGCGGCGGCGGCACGGGCGGCCACCCACACGCGCACGTGCATCACCGCGGGCCCGCGCTGCCCAAGGTGAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 90 bp CGTCCTGCACCGGCGACAGCAGGTCCTCCCGGGGCTCGATGGTGCTaGCGCTGTAGGCGGGGCTCCGCAAGTGGTGGCTTTCCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: RPAPATAGPPGARWC*RCRRGSASGGFPAS
Trigger: AGAGGCGGGAAAGCCACCACTTGCGGAGCCCCGCCTACAGCGTCAGCACCATCGAGCCCCGGGAGGACCTGCTGTCGCCGGTGCAGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 90 bp GGCGCACGCCGGGGGACGAGCCAGAGGGAGCGGGTCGCGGGGGTGTaGATGCATCTCCCGCCTTCTTCTTGCAGCGCACACTGTACATGG +
Preference number: 5 (lower is better)
Translates to: GARRGTSQRERVAGV*MHLPPSSCSAHCTW
Trigger: CCATGTACAGTGTGCGCTGCAAGAAGAAGGCGGGAGATGCATGCACACCCCCGCGACCCGCTCCCTCTGGCTCGTCCCCCGGCGTGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 90 bp TGTGGGTGGCCGCCCGTGCCGCCGCCGCCGCCGTACACGCTGTACTaGATGTTAAAGGAGCTCACGTCGGAGTTGTTGGTGCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: CGWPPVPPPPPYTLY*MLKELTSELLVLVW
Trigger: CCACACCAGCACCAACAACTCCGACGTGAGCTCCTTTAACATGCAGTACAGCGTGTACGGCGGCGGCGGCGGCACGGGCGGCCACCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 90 bp CACGCCGGGGGACGAGCCAGAGGGAGCGGGTCGCGGGGGTGTGCATaGATCTCCCGCCTTCTTCTTGCAGCGCACACTGTACATGGTAGT +
Preference number: 5 (lower is better)
Translates to: HAGGRARGSGSRGCA*ISRLLLAAHTVHGS
Trigger: ACTACCATGTACAGTGTGCGCTGCAAGAAGAAGGCGGGAGATGCATGCACACCCCCGCGACCCGCTCCCTCTGGCTCGTCCCCCGGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 90 bp GTGCAGGGCCCAGTCCAGTGCACTTGTTTATTGTCGCGCCTCTGGTaGGAGCCAAGCTGCAGCAGACATGATGGGCCCGGGGCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: VQGPVQCTCLLSRLW*EPSCSRHDGPGAKR
Trigger: CCGCTTCGCCCCGGGCCCATCATGTCTGCTGCAGCTTGGCTCGCACCAGAGGCGCGACAATAAACAAGTGCACTGGACTGGGCCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS CCA 90 bp CGGGTGCAGGGCCCAGTCCAGTGCACTTGTTTATTGTCGCGCCTCTaGTGCGAGCCAAGCTGCAGCAGACATGATGGGCCCGGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: RVQGPVQCTCLLSRL*CEPSCSRHDGPGAK
Trigger: CTTCGCCCCGGGCCCATCATGTCTGCTGCAGCTTGGCTCGCACCAGAGGCGCGACAATAAACAAGTGCACTGGACTGGGCCCTGCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 90 bp GTCTCTGAGACAGCTGCTCCGGAGCGGGTGCAGGGCCCAGTCCAGTaGACTTGTTTATTGTCGCGCCTCTGGTGCGAGCCAAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VSETAAPERVQGPVQ*TCLLSRLWCEPSCS
Trigger: GCTGCAGCTTGGCTCGCACCAGAGGCGCGACAATAAACAAGTGCACTGGACTGGGCCCTGCACCCGCTCCGGAGCAGCTGTCTCAGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 90 bp GCGGTAAGCAACACCGGGTCTCTGAGACAGCTGCTCCGGAGCGGGTaGAGGGCCCAGTCCAGTGCACTTGTTTATTGTCGCGCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: AVSNTGSLRQLLRSG*RAQSSALVYCRASG
Trigger: ACCAGAGGCGCGACAATAAACAAGTGCACTGGACTGGGCCCTGCACCCGCTCCGGAGCAGCTGTCTCAGAGACCCGGTGTTGCTTACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 90 bp GGCGTCTCAGGTCATAGTTGGGGGAGAAAGTGTAAGCAGCGGGGCTaGACGGGAATTTGGGATATTCCGGGAGGCTATTGCCGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: GVSGHSWGRKCKQRG*TGIWDIPGGYCRRG
Trigger: CCCCCGCCGGCAATAGCCTCCCGGAATATCCCAAATTCCCGTGCAGCCCCGCTGCTTACACTTTCTCCCCCAACTATGACCTGAGACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 90 bp TCATCGAGATGCGGTTATTCCCCAGGTGCAGGAGGTCCAGCCCCGTaGCCTCCAGGAAGTCTGTCCTGCGCACGACAGCGATGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: SSRCGYSPGAGGPAP*PPGSLSCARQRCSS
Trigger: AGAACTACATCGCTGTCGTGCGCAGGACAGACTTCCTGGAGGCCACGGGGCTGGACCTCCTGCACCTGGGGAATAACCGCATCTCGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 90 bp GGTTGCAAGAGCACGCGGTGGGACACTCCAAAGGCACCGGGGATTTaGTCTGATAGGCGATGCTGGGGCCATAGTTGCTGTAGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: GCKSTRWDTPKAPGI*SDRRCWGHSCCSPS
Trigger: ACTTGGGCTACAGCAACTATGGCCCCAGCATCGCCTATCAGACCAAATCCCCGGTGCCTTTGGAGTGTCCCACCGCGTGCTCTTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGGGCGCACCCTGGGCTaGTTGGGTTGGCGAGTCCCC +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGGRTLG*LGWRVP
Trigger: GGGGACTCGCCAACCCAACAAGCCCAGGGTGCGCCC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS GCA 90 bp ATCTTTCGCTCCTGGCAGTTTACGTTGAGGCCCAGATCAGAGATCTaGAGGTTGCAAGAGCACGCGGTGGGACACTCCAAAGGCACCGGG +
Preference number: 5 (lower is better)
Translates to: IFRSWQFTLRPRSEI*RLQEHAVGHSKGTG
Trigger: CCCGGTGCCTTTGGAGTGTCCCACCGCGTGCTCTTGCAACCTGCAGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGAGCGAAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 90 bp CCAGGTGCAGGAGGTCCAGCCCCGTGGCCTCCAGGAAGTCTGTCCTaGGCACGACAGCGATGTAGTTCTCTGTCAGATACATTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PGAGGPAPWPPGSLS*ARQRCSSLSDTFSW
Trigger: CCAAGAAAATGTATCTGACAGAGAACTACATCGCTGTCGTGCGCAGGACAGACTTCCTGGAGGCCACGGGGCTGGACCTCCTGCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 90 bp TTAAAGGAGCTCACGTCGGAGTTGTTGGTGCTGGTGTGGTCGCTCTaGTTCTTCTTCCTGCGCTTCATGACCAGCACGAAGAGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: LKELTSELLVLVWSL*FFFLRFMTSTKSPA
Trigger: CGCCGGGCTCTTCGTGCTGGTCATGAAGCGCAGGAAGAAGAACCAGAGCGACCACACCAGCACCAACAACTCCGACGTGAGCTCCTTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 90 bp GCAGTTCAGCGATGCTCTCGATCTTTCGCTCCTGGCAGTTTACGTTaGGGCCCAGATCAGAGATCTGCAGGTTGCAAGAGCACGCGGTGG +
Preference number: 5 (lower is better)
Translates to: AVQRCSRSFAPGSLR*GPDQRSAGCKSTRW
Trigger: CCACCGCGTGCTCTTGCAACCTGCAGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGAGCGAAAGATCGAGAGCATCGCTGAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 90 bp AGCCTGAGGAGGGTCAAGCCAGAGAAGACGCCTGAGGGCATGGCCTaGAGGAGGTTGTTATTCAAGAATAGCAGCTGGAGGTTTGGGACC +
Preference number: 5 (lower is better)
Translates to: SLRRVKPEKTPEGMA*RRLLFKNSSWRFGT
Trigger: GGTCCCAAACCTCCAGCTGCTATTCTTGAATAACAACCTCCTGCAGGCCATGCCCTCAGGCGTCTTCTCTGGCTTGACCCTCCTCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAATAGCAGCTGGAGGTTaGGGACCGGGTCAAAAGTTC +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITIAAGG*GPGQKF
Trigger: GAACTTTTGACCCGGTCCCAAACCTCCAGCTGCTAT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACGATTACTTCTTGCCTaGCACCCTGAGCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITRLLLA*HPELLG
Trigger: TCCCAGAAGCTCAGGGTGCAAGGCAAGAAGTAATCG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS TCA 90 bp AGGGACCTGGATAGAGGAGGGTGTGGGCGTGGAAACTACTACATCTaGATAGTCAGGGCACAGCAGCTCCGACTTAATGGAGCGCATGTC +
Preference number: 5 (lower is better)
Translates to: RDLDRGGCGRGNYYI*IVRAQQLRLNGAHV
Trigger: GACATGCGCTCCATTAAGTCGGAGCTGCTGTGCCCTGACTATTCAGATGTAGTAGTTTCCACGCCCACACCCTCCTCTATCCAGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCACTAGGACGCCCACTTaGAGCTGCTCCACCCACAGC +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGTRTPT*SCSTHS
Trigger: GCTGTGGGTGGAGCAGCTCAAAGTGGGCGTCCTAGT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGAGCTCACGTCGGAGTaGTTGGTGCTGGTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGELTSE*LVLVWS
Trigger: CGACCACACCAGCACCAACAACTCCGACGTGAGCTC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS CCA 90 bp CAAAGGCGTCTGCGGCCTCATCTCGTAGTCAGAAATAAGTCTCCTTaGGCAAAGTTCCTGCTTGGATACCTCGTCCAAGTCCCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: QRRLRPHLVVRNKSP*AKFLLGYLVQVPSV
Trigger: CACGGAAGGGACTTGGACGAGGTATCCAAGCAGGAACTTTGCCCAAGGAGACTTATTTCTGACTACGAGATGAGGCCGCAGACGCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGGGCAAAGTTCCTGCTaGGATACCTCGTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGGQSSC*DTSSKS
Trigger: GGACTTGGACGAGGTATCCAAGCAGGAACTTTGCCC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAAAATGCAGATTCAATaGGGTGGGTTGCATTGGCTT +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITKMQIQ*GGLHWL
Trigger: AAGCCAATGCAACCCACCCAATTGAATCTGCATTTT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAATCTCACATGGCTTCTaGGCATCATTTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITISHGF*ASFSSS
Trigger: ACTGGAAGAAAATGATGCCAAGAAGCCATGTGAGAT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACCTGGGCTTGTTGGGTaGGCGAGTCCCCTTAGGGGG +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQPGLVG*ASPLRG
Trigger: CCCCCTAAGGGGACTCGCCAACCCAACAAGCCCAGG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACCGGGATCATATTCGTaGAAAATGCCTGAAAATTTC +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITPGSYS*KMPENF
Trigger: GAAATTTTCAGGCATTTTCAACGAATATGATCCCGG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS TCA 90 bp AAGAATAGCAGCTGGAGGTTTGGGACCGGGTCAAAAGTTCCAGACTaGATCTCGCGGATGAGATTGTACTGGAGGAAGAGATACTGCAGG +
Preference number: 5 (lower is better)
Translates to: KNSSWRFGTGSKVPD*ISRMRLYWRKRYCR
Trigger: CCTGCAGTATCTCTTCCTCCAGTACAATCTCATCCGCGAGATTCAGTCTGGAACTTTTGACCCGGTCCCAAACCTCCAGCTGCTATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 90 bp CGATGTAGTTCTCTGTCAGATACATTTTCTTGGGATTGTAGGGCTTaGGCTGCAGTTCAGCGATGCTCTCGATCTTTCGCTCCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: RCSSLSDTFSWDCRA*AAVQRCSRSFAPGS
Trigger: ACTGCCAGGAGCGAAAGATCGAGAGCATCGCTGAACTGCAGCCCAAGCCCTACAATCCCAAGAAAATGTATCTGACAGAGAACTACATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGGGCTGCACGGGAATTaGGGATATTCCGGGAGGCTA +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKGLHGN*GYSGRL
Trigger: TAGCCTCCCGGAATATCCCAAATTCCCGTGCAGCCC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAACAGGGATAAAGACATaGTATAGAGACTTGTACAGT +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITTGIKT*YRDLYS
Trigger: ACTGTACAAGTCTCTATACAATGTCTTTATCCCTGT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACAAAATCGCAAATAAGTTaGTCAATGTGGACCAGGTAT +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITKSQIS*SMWTRY
Trigger: ATACCTGGTCCACATTGACAAACTTATTTGCGATTT...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACAAGTATATGAGCAGTaGAACAGTTTAGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITQVYEQ*NSLGKA
Trigger: AGCTTTTCCTAAACTGTTCAACTGCTCATATACTTG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATGTAATTTCAGCACTTaGGGAGGCCGCGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKCNFST*GGRGRW
Trigger: CCACCTGCCGCGGCCTCCCAAAGTGCTGAAATTACA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp TGCAACCGCTGCCTCCGGGTTCAAGCTTCAGCCTCCCGAGTAGCTGGGATTACACTGCATTGGCTATATTaGTACACTCAAAATCTCCAT +
Preference number: 5 (lower is better)
Translates to: CNRCLRVQASASRVAGITLHWLY*YTQNLH
Trigger: ATGGAGATTTTGAGTGTACAAATATAGCCAATGCAG...TGTAATCCCAGCTACTCGGGAGGCTGAAGCTTGAACCCGGAGGCAGCGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS GCA 90 bp AGGGGGTCTCACAAACTACATCCCCCACCAGGGCTGAATAGGAGATaGTGTCCAACCAATCCTTTAGAGAGATCAGCTCACAAGAACAAT +
Preference number: 5 (lower is better)
Translates to: RGSHKLHPPPGLNRR*CPTNPLERSAHKNN
Trigger: ATTGTTCTTGTGAGCTGATCTCTCTAAAGGATTGGTTGGACAGCATCTCCTATTCAGCCCTGGTGGGGGATGTAGTTTGTGAGACCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACTCACGTCGGAGTTGTaGGTGCTGGTGTGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQLTSEL*VLVWSL
Trigger: GAGCGACCACACCAGCACCAACAACTCCGACGTGAG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCAACCCCTTCTGGCTaGTTGCAATACAAGAGTTAC +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPTPSG*LQYKSY
Trigger: GTAACTCTTGTATTGCAACAAGCCAGAAGGGGTTGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCCAAAGATGTGCATGTaGGGTTCATCGGTGTGTCTA +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGPKMCM*GSSVCL
Trigger: TAGACACACCGATGAACCCAACATGCACATCTTTGG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAGATATTCGTTCCGGTaGGGTTCTACAAAGACAGCA +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGRYSFR*GSTKTA
Trigger: TGCTGTCTTTGTAGAACCCAACCGGAACGAATATCT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAACACCCGCGCAGCAAATaGGCCTCCTTAAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQHPRSK*ASLKPF
Trigger: GAAGGGCTTTAAGGAGGCCAATTTGCTGCGCGGGTG...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGTCTCTGGTGCTGAATaGGGTTTCCAGCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKVSGAE*GFQLSI
Trigger: GATGCTGAGCTGGAAACCCAATTCAGCACCAGAGAC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS GCA 90 bp AGGAAGGTATCATCTCGCAGAAGTTCCAGTTTATTATTGTTTAGATaGAATCTCCTCAAACCCCGTAGCCCATGGAAAGCCCCGGTCTCA +
Preference number: 5 (lower is better)
Translates to: RKVSSRRSSSLLLFR*NLLKPRSPWKAPVS
Trigger: TGAGACCGGGGCTTTCCATGGGCTACGGGGTTTGAGGAGATTGCATCTAAACAATAATAAACTGGAACTTCTGCGAGATGATACCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTCGCACCCTGGGCTTGTaGGGTTGGCGAGTCCCCTTA +
Preference number: 5 (lower is better)
Translates to: EPSMELFKLNSQILAFQTRTLGL*GWRVPL
Trigger: TAAGGGGACTCGCCAACCCAACAAGCCCAGGGTGCG...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGTCTCAGCGAATTTTTaGGGCGCCTTACAGATCACC +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKVSANF*GALQIT
Trigger: GGTGATCTGTAAGGCGCCCAAAAAATTCGCTGAGAC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGTGGTGGAGCAGTGTTaGTCTGGTTCTAAAATGCCC +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKVVEQC*SGSKMP
Trigger: GGGCATTTTAGAACCAGACAAACACTGCTCCACCAC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGTGAATGCTGCCTCTTaGTGGCAGAATGCCATGGAA +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKVNAAS*WQNAME
Trigger: TTCCATGGCATTCTGCCACAAAGAGGCAGCATTCAC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGAGACACAAAGAAAGTaGCCAAAGACACACCATCAA +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGETQRK*PKTHHQ
Trigger: TTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCAACGGAGACATTGTTaGCATCTTGCTTCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGQRRHC*HLASSV
Trigger: AACTGAAGAAGCAAGATGCAAACAATGTCTCCGTTG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCGAAAACCGTATTCACTaGACAAAGCATAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGENRIH*TKHSLQ
Trigger: TTGCAGGCTATGCTTTGTCAAGTGAATACGGTTTTC...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATCCTGGCAGTTTACGTaGAGGCCCAGATCAGAGATC +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQSWQFT*RPRSEI
Trigger: GATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATGGAGTCATGTGACTTaGGGAACCATCGATGGAACT +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKWSHVT*GTIDGT
Trigger: AGTTCCATCGATGGTTCCCAAAGTCACATGACTCCA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCATCACATATAAAGCTTaGATAAACTCTGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGITYKA*INSELP
Trigger: GGGGAGCTCAGAGTTTATCAAAGCTTTATATGTGAT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS CCA 90 bp CCTCACAAGGACATGCATTGTCACAGATTTCCCCATAATAATCGATaGTTTCTGCACACGAAAGGACGAGAGATGTTACAGCAAACGCTA +
Preference number: 5 (lower is better)
Translates to: PHKDMHCHRFPHNNR*FLHTKGREMLQQTL
Trigger: TAGCGTTTGCTGTAACATCTCTCGTCCTTTCGTGTGCAGAAACCATCGATTATTATGGGGAAATCTGTGACAATGCATGTCCTTGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 90 bp AGTTTATTATTGTTTAGATGCAATCTCCTCAAACCCCGTAGCCCATaGAAAGCCCCGGTCTCAATGTCCTGGATAACATTGCTACCTAGA +
Preference number: 5 (lower is better)
Translates to: SLLLFRCNLLKPRSP*KAPVSMSWITLLPR
Trigger: TCTAGGTAGCAATGTTATCCAGGACATTGAGACCGGGGCTTTCCATGGGCTACGGGGTTTGAGGAGATTGCATCTAAACAATAATAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAACACAAAAACCCTCTTaGGGGTATGCACTAGGTTTC +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKTQKPS*GYALGF
Trigger: GAAACCTAGTGCATACCCCAAAGAGGGTTTTTGTGT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCATGTCCTGGATAACATaGCTACCTAGATGCAAAATT +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGMSWIT*LPRCKI
Trigger: AATTTTGCATCTAGGTAGCAATGTTATCCAGGACAT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTCAGAGATCTGCAGGTaGCAAGAGCACGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: EPSMELFKLNSQILAFQTSEICR*QEHAVG
Trigger: TCCCACCGCGTGCTCTTGCAACCTGCAGATCTCTGA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAATTTCCTATTAAAGTaGGGGTGTGCTAATTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGNFLLK*GCANFS
Trigger: GGAGAAATTAGCACACCCCAACTTTAATAGGAAATT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCCAAATGCAACTGGGTTaGGTTAAACAATCGAAAATC +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGQMQLG*VKQSKI
Trigger: GATTTTCGATTGTTTAACCAAACCCAGTTGCATTTG...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATTGTCATTATCATCATaGCTTGCTGCCCACAGGGAT +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKLSLSS*LAAHRD
Trigger: ATCCCTGTGGGCAGCAAGCAATGATGATAATGACAA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAACAATGGGACGATGTCTaGCCCATGGTTAGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKQWDDV*PMVSLF
Trigger: AAAAAGACTAACCATGGGCAAGACATCGTCCCATTG...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAAGGCAGGTGAGTTATaGTCTTGGAGGCCTACATTT +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKKAGEL*SWRPTF
Trigger: AAATGTAGGCCTCCAAGACAATAACTCACCTGCCTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp CCACTGAAATATACGTGCAGTCAGCCCCAGAGAAAAATGTGTCCCTGTGTAGGCAGTATTGCTAACATCTaGCTTACTATCCCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: PLKYTCSQPQRKMCPCVGSIANI*LTIPLR
Trigger: TCTTAAGGGGATAGTAAGCAAGATGTTAGCAATACT...GCCTACACAGGGACACATTTTTCTCTGGGGCTGACTGCACGTATATTTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAATCTCGCGGATGAGATaGTACTGGAGGAAGAGATAC +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQISRMR*YWRKRY
Trigger: GTATCTCTTCCTCCAGTACAATCTCATCCGCGAGAT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAATGGCCTGCAGGAGGTaGTTATTCAAGAATAGCAGC +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQMACRR*LFKNSS
Trigger: GCTGCTATTCTTGAATAACAACCTCCTGCAGGCCAT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGTACAATCCCAAGGATaGTCATGCAGGTCGATTTGG +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQVQSQG*SCRSIW
Trigger: CCAAATCGACCTGCATGACAATCCTTGGGATTGTAC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS GCA 90 bp TTGTTGGGTAAACTGGACAAAAGATTGTCATTGAGGATAAGCACCTaGAACAAATGCAGTTTCCCAAAAGCATTGGGTTCAATGACGCTG +
Preference number: 5 (lower is better)
Translates to: LLGKLDKRLSLRIST*NKCSFPKALGSMTL
Trigger: CAGCGTCATTGAACCCAATGCTTTTGGGAAACTGCATTTGTTGCAGGTGCTTATCCTCAATGACAATCTTTTGTCCAGTTTACCCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAAAGGAGGATCTCAGATaGTCACTGAGACTAGTAAAT +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKKEDLR*SLRLVN
Trigger: ATTTACTAGTCTCAGTGACAATCTGAGATCCTCCTT...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAATTCACTAAATTCACCTaGGTCTGCAGACATCTACAA +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKFTKFT*VCRHLQ
Trigger: TTGTAGATGTCTGCAGACCAAGGTGAATTTAGTGAA...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GCAGAGACACAAAGAAAGTTGCCAAAGACACACCATCAATCTGTGGTGGACAAAGACTTGAAATCTTTTTaGATATCTGAGGCACCTTCA +
Preference number: 5 (lower is better)
Translates to: AETQRKLPKTHHQSVVDKDLKSF*ISEAPS
Trigger: TGAAGGTGCCTCAGATATCAAAAAAGATTTCAAGTC...TTTGTCCACCACAGATTGATGGTGTGTCTTTGGCAACTTTCTTTGTGTCTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAGCCTACATTTTCTACTaGATTGGCAGGCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQAYIFY*IGRLHL
Trigger: AAGATGAAGCCTGCCAATCAAGTAGAAAATGTAGGC...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAAACTGGACAAAAGATaGTCATTGAGGATAAGCACC +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQKLDKR*SLRIST
Trigger: GGTGCTTATCCTCAATGACAATCTTTTGTCCAGTTT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAGTTTCCCAAAAGCATaGGGTTCAATGACGCTGATG +
Preference number: 5 (lower is better)
Translates to: EPSMELFKLNSQILAFQTSFPKA*GSMTLM
Trigger: CATCAGCGTCATTGAACCCAATGCTTTTGGGAAACT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAAAACAGCTTACTGTACTaGGTCAATGTAGCATTACAA +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQNSLLY*VNVALQ
Trigger: TTGTAATGCTACATTGACCAAGTACAGTAAGCTGTT...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGTCATTCCAGGTATCTaGCCATGCCTGCAAATATCT +
Preference number: 5 (lower is better)
Translates to: EPSMELFKLNSQILAFQTVIPGI*PCLQIS
Trigger: AGATATTTGCAGGCATGGCAAGATACCTGGAATGAC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp ACTAGGCCAAAACCAATAATAGGACAACGGATGACTCAAGTACATGCTATGCAATCTGGTTTAATTGTCTaGCATGGAATGGAAACAACA +
Preference number: 5 (lower is better)
Translates to: TRPKPIIGQRMTQVHAMQSGLIV*HGMETT
Trigger: TGTTGTTTCCATTCCATGCAAGACAATTAAACCAGA...TTGCATAGCATGTACTTGAGTCATCCGTTGTCCTATTATTGGTTTTGGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGAACAGCCCTTGATATaGTACAAATTCCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: EPSMELFKLNSQILAFQTEQPLI*YKFQVK
Trigger: TTTCACCTGGAATTTGTACAATATCAAGGGCTGTTC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTAAACGGAAAAGATTGTaGGGTAAACTGGACAAAAGA +
Preference number: 5 (lower is better)
Translates to: EPSMELFKLNSQILAFQTKRKRL*GKLDKR
Trigger: TCTTTTGTCCAGTTTACCCAACAATCTTTTCCGTTT...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTTGCAAATATCTTAAATaGGAGCCATCTGAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: EPSMELFKLNSQILAFQTCKYLK*EPSEKC
Trigger: GCACTTTTCAGATGGCTCCAATTTAAGATATTTGCA...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS-3UTR CAA 90 bp GAACCATCGATGGAACTCTTCAAATTAAATAGCCAGATTTTGGCATTTCAAACTGGTAAGATAAAAGGATaGCTAAAAGTATGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: EPSMELFKLNSQILAFQTGKIKG*LKVCAA
Trigger: AGCAGCACATACTTTTAGCAATCCTTTTATCTTACC...AGTTTGAAATGCCAAAATCTGGCTATTTAATTTGAAGAGTTCCATCGATGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325089.7
CDS TCA 72 bp GCGGGCGTCTTCACCTTGGGCAGCGCGGGCCCGCGGTaGTGCACGTGCGCGTGTGGGTGGCCGCCCGTGCCG +
Preference number: 6 (lower is better)
Translates to: AGVFTLGSAGPR*CTCACGWPPVP
Trigger: CGGCACGGGCGGCCACCCACACGCGCACGTGCATCACCGCGGGCCCGCGCTGCCCAAGGTGAAGACGCCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 72 bp CCGGCGACAGCAGGTCCTCCCGGGGCTCGATGGTGCTaGCGCTGTAGGCGGGGCTCCGCAAGTGGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: PATAGPPGARWC*RCRRGSASGGF
Trigger: AAAGCCACCACTTGCGGAGCCCCGCCTACAGCGTCAGCACCATCGAGCCCCGGGAGGACCTGCTGTCGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp CGGGGGACGAGCCAGAGGGAGCGGGTCGCGGGGGTGTaGATGCATCTCCCGCCTTCTTCTTGCAGCGCACAC +
Preference number: 6 (lower is better)
Translates to: RGTSQRERVAGV*MHLPPSSCSAH
Trigger: GTGTGCGCTGCAAGAAGAAGGCGGGAGATGCATGCACACCCCCGCGACCCGCTCCCTCTGGCTCGTCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS CCA 72 bp TGTATTCATACACGTGGCCCGCGGGCGTCTTCACCTTaGGCAGCGCGGGCCCGCGGTGATGCACGTGCGCGT +
Preference number: 6 (lower is better)
Translates to: CIHTRGPRASSP*AARARGDARAR
Trigger: ACGCGCACGTGCATCACCGCGGGCCCGCGCTGCCCAAGGTGAAGACGCCCGCGGGCCACGTGTATGAATACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp CCGCCCGTGCCGCCGCCGCCGCCGTACACGCTGTACTaGATGTTAAAGGAGCTCACGTCGGAGTTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PPVPPPPPYTLY*MLKELTSELLV
Trigger: CACCAACAACTCCGACGTGAGCTCCTTTAACATGCAGTACAGCGTGTACGGCGGCGGCGGCGGCACGGGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp GGACGAGCCAGAGGGAGCGGGTCGCGGGGGTGTGCATaGATCTCCCGCCTTCTTCTTGCAGCGCACACTGTA +
Preference number: 6 (lower is better)
Translates to: GRARGSGSRGCA*ISRLLLAAHTV
Trigger: TACAGTGTGCGCTGCAAGAAGAAGGCGGGAGATGCATGCACACCCCCGCGACCCGCTCCCTCTGGCTCGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 72 bp ACTTGTTTATTGTCGCGCCTCTGGTGCGAGCCAAGCTaGAGCAGACATGATGGGCCCGGGGCGAAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: TCLLSRLWCEPS*SRHDGPGAKRA
Trigger: CGCCCGCTTCGCCCCGGGCCCATCATGTCTGCTGCAGCTTGGCTCGCACCAGAGGCGCGACAATAAACAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 72 bp ACAGCTGCTCCGGAGCGGGTGCAGGGCCCAGTCCAGTaGACTTGTTTATTGTCGCGCCTCTGGTGCGAGCCA +
Preference number: 6 (lower is better)
Translates to: TAAPERVQGPVQ*TCLLSRLWCEP
Trigger: TGGCTCGCACCAGAGGCGCGACAATAAACAAGTGCACTGGACTGGGCCCTGCACCCGCTCCGGAGCAGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS CAA 72 bp TGCTCCGGAGCGGGTGCAGGGCCCAGTCCAGTGCACTaGTTTATTGTCGCGCCTCTGGTGCGAGCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: CSGAGAGPSPVH*FIVAPLVRAKL
Trigger: CAGCTTGGCTCGCACCAGAGGCGCGACAATAAACAAGTGCACTGGACTGGGCCCTGCACCCGCTCCGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS CAA 90 bp GAGGGAGCGGGTCGCGGGGGTGTGCATGCATCTCCCGCCTTCTTCTaGCAGCGCACACTGTACATGGTAGTGAGGGGGCGAGCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: EGAGRGGVHASPAFF*QRTLYMVVRGRAKV
Trigger: CACCTTTGCTCGCCCCCTCACTACCATGTACAGTGTGCGCTGCAAGAAGAAGGCGGGAGATGCATGCACACCCCCGCGACCCGCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS TCA 72 bp TGGTGTGGTCGCTCTGGTTCTTCTTCCTGCGCTTCATaGCCAGCACGAAGAGCCCGGCGGCCACGAAGACGG +
Preference number: 6 (lower is better)
Translates to: WCGRSGSSSCAS*PARRARRPRRR
Trigger: CCGTCTTCGTGGCCGCCGGGCTCTTCGTGCTGGTCATGAAGCGCAGGAAGAAGAACCAGAGCGACCACACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp ACCGCAGGAGTCACGGCGCTGGTCCTCGCAGGGACCTaGATAGAGGAGGGTGTGGGCGTGGAAACTACTACA +
Preference number: 6 (lower is better)
Translates to: TAGVTALVLAGT*IEEGVGVETTT
Trigger: TGTAGTAGTTTCCACGCCCACACCCTCCTCTATCCAGGTCCCTGCGAGGACCAGCGCCGTGACTCCTGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp GGGAGAAAGTGTAAGCAGCGGGGCTGCACGGGAATTTaGGATATTCCGGGAGGCTATTGCCGGCGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: GRKCKQRGCTGI*DIPGGYCRRGW
Trigger: CCACCCCCGCCGGCAATAGCCTCCCGGAATATCCCAAATTCCCGTGCAGCCCCGCTGCTTACACTTTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp GAGAAAGTTGCGTCTTCCTCCCGGGCGCCGAGGAGGTaGCAACGCGGTAAGCAACACCGGGTCTCTGAGACA +
Preference number: 6 (lower is better)
Translates to: EKVASSSRAPRR*QRGKQHRVSET
Trigger: TGTCTCAGAGACCCGGTGTTGCTTACCGCGTTGCCACCTCCTCGGCGCCCGGGAGGAAGACGCAACTTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 72 bp CCAGTCCAGTGCACTTGTTTATTGTCGCGCCTCTGGTaGGAGCCAAGCTGCAGCAGACATGATGGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: PVQCTCLLSRLW*EPSCSRHDGPG
Trigger: CCCGGGCCCATCATGTCTGCTGCAGCTTGGCTCGCACCAGAGGCGCGACAATAAACAAGTGCACTGGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 72 bp AACACCGGGTCTCTGAGACAGCTGCTCCGGAGCGGGTaGAGGGCCCAGTCCAGTGCACTTGTTTATTGTCGC +
Preference number: 6 (lower is better)
Translates to: NTGSLRQLLRSG*RAQSSALVYCR
Trigger: GCGACAATAAACAAGTGCACTGGACTGGGCCCTGCACCCGCTCCGGAGCAGCTGTCTCAGAGACCCGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS CCA 72 bp CGCCTCAGGTTGGTGAGATCCCCGAAAGCGCGGTCCTaGATCATCGAGATGCGGTTATTCCCCAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RLRLVRSPKARS*IIEMRLFPRCR
Trigger: CCTGCACCTGGGGAATAACCGCATCTCGATGATCCAGGACCGCGCTTTCGGGGATCTCACCAACCTGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp GGCCCAGTCCAGTGCACTTGTTTATTGTCGCGCCTCTaGTGCGAGCCAAGCTGCAGCAGACATGATGGGCCC +
Preference number: 6 (lower is better)
Translates to: GPVQCTCLLSRL*CEPSCSRHDGP
Trigger: GGGCCCATCATGTCTGCTGCAGCTTGGCTCGCACCAGAGGCGCGACAATAAACAAGTGCACTGGACTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS CAA 72 bp GGGCTGCACGGGAATTTGGGATATTCCGGGAGGCTATaGCCGGCGGGGGTGGTGGAGCAGTGTTTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: GLHGNLGYSGRL*PAGVVEQCLSG
Trigger: ACCAGACAAACACTGCTCCACCACCCCCGCCGGCAATAGCCTCCCGGAATATCCCAAATTCCCGTGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp TCACTGACGCCGGGGTGGTGTGTAAATACCCCGTGGTaGTCAAAGGCGTCTGCGGCCTCATCTCGTAGTCAG +
Preference number: 6 (lower is better)
Translates to: SLTPGWCVNTPW*SKASAASSRSQ
Trigger: CTGACTACGAGATGAGGCCGCAGACGCCTTTGAGCACCACGGGGTATTTACACACCACCCCGGCGTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp GGCTGCACGGGAATTTGGGATATTCCGGGAGGCTATTaGCGGCGGGGGTGGTGGAGCAGTGTTTGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: GCTGIWDIPGGY*RRGWWSSVCLV
Trigger: AACCAGACAAACACTGCTCCACCACCCCCGCCGGCAATAGCCTCCCGGAATATCCCAAATTCCCGTGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp AGCACGCGGTGGGACACTCCAAAGGCACCGGGGATTTaGTCTGATAGGCGATGCTGGGGCCATAGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: STRWDTPKAPGI*SDRRCWGHSCC
Trigger: ACAGCAACTATGGCCCCAGCATCGCCTATCAGACCAAATCCCCGGTGCCTTTGGAGTGTCCCACCGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp AATCCTCTACGGAGTTGCCCTCTCGGGAGCGGTAGATaGGGTTTTTGCACATGTGGCCCAGTGGGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: NPLRSCPLGSGR*GFCTCGPVGGG
Trigger: TCCCCCACCCACTGGGCCACATGTGCAAAAACCCCATCTACCGCTCCCGAGAGGGCAACTCCGTAGAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 90 bp CGCTCCTGGCAGTTTACGTTGAGGCCCAGATCAGAGATCTGCAGGTaGCAAGAGCACGCGGTGGGACACTCCAAAGGCACCGGGGATTTG +
Preference number: 6 (lower is better)
Translates to: RSWQFTLRPRSEICR*QEHAVGHSKGTGDL
Trigger: CAAATCCCCGGTGCCTTTGGAGTGTCCCACCGCGTGCTCTTGCAACCTGCAGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 90 bp CCGCCGTACACGCTGTACTGCATGTTAAAGGAGCTCACGTCGGAGTaGTTGGTGCTGGTGTGGTCGCTCTGGTTCTTCTTCCTGCGCTTC +
Preference number: 6 (lower is better)
Translates to: PPYTLYCMLKELTSE*LVLVWSLWFFFLRF
Trigger: GAAGCGCAGGAAGAAGAACCAGAGCGACCACACCAGCACCAACAACTCCGACGTGAGCTCCTTTAACATGCAGTACAGCGTGTACGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp AATTCACTGACGCCGGGGTGGTGTGTAAATACCCCGTaGTGCTCAAAGGCGTCTGCGGCCTCATCTCGTAGT +
Preference number: 6 (lower is better)
Translates to: NSLTPGWCVNTP*CSKASAASSRS
Trigger: ACTACGAGATGAGGCCGCAGACGCCTTTGAGCACCACGGGGTATTTACACACCACCCCGGCGTCAGTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp CCAGATCAGAGATCTGCAGGTTGCAAGAGCACGCGGTaGGACACTCCAAAGGCACCGGGGATTTGGTCTGAT +
Preference number: 6 (lower is better)
Translates to: PDQRSAGCKSTR*DTPKAPGIWSD
Trigger: ATCAGACCAAATCCCCGGTGCCTTTGGAGTGTCCCACCGCGTGCTCTTGCAACCTGCAGATCTCTGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp CAGTTTACGTTGAGGCCCAGATCAGAGATCTGCAGGTaGCAAGAGCACGCGGTGGGACACTCCAAAGGCACC +
Preference number: 6 (lower is better)
Translates to: QFTLRPRSEICR*QEHAVGHSKGT
Trigger: GGTGCCTTTGGAGTGTCCCACCGCGTGCTCTTGCAACCTGCAGATCTCTGATCTGGGCCTCAACGTAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp GCCTTACAGATCACCTCGTCCACTAGGACGCCCACTTaGAGCTGCTCCACCCACAGCTTCATGCCCACAATG +
Preference number: 6 (lower is better)
Translates to: ALQITSSTRTPT*SCSTHSFMPTM
Trigger: CATTGTGGGCATGAAGCTGTGGGTGGAGCAGCTCAAAGTGGGCGTCCTAGTGGACGAGGTGATCTGTAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 90 bp TGCAGTTCAGCGATGCTCTCGATCTTTCGCTCCTGGCAGTTTACGTaGAGGCCCAGATCAGAGATCTGCAGGTTGCAAGAGCACGCGGTG +
Preference number: 6 (lower is better)
Translates to: CSSAMLSIFRSWQFT*RPRSEICRLQEHAV
Trigger: CACCGCGTGCTCTTGCAACCTGCAGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGAGCGAAAGATCGAGAGCATCGCTGAACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp TCCTGGCAGTTTACGTTGAGGCCCAGATCAGAGATCTaGAGGTTGCAAGAGCACGCGGTGGGACACTCCAAA +
Preference number: 6 (lower is better)
Translates to: SWQFTLRPRSEI*RLQEHAVGHSK
Trigger: TTTGGAGTGTCCCACCGCGTGCTCTTGCAACCTGCAGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp AGGGTCAAGCCAGAGAAGACGCCTGAGGGCATGGCCTaGAGGAGGTTGTTATTCAAGAATAGCAGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: RVKPEKTPEGMA*RRLLFKNSSWR
Trigger: CCTCCAGCTGCTATTCTTGAATAACAACCTCCTGCAGGCCATGCCCTCAGGCGTCTTCTCTGGCTTGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp GGTCATAGTTGGGGGAGAAAGTGTAAGCAGCGGGGCTaGACGGGAATTTGGGATATTCCGGGAGGCTATTGC +
Preference number: 6 (lower is better)
Translates to: GHSWGRKCKQRG*TGIWDIPGGYC
Trigger: GCAATAGCCTCCCGGAATATCCCAAATTCCCGTGCAGCCCCGCTGCTTACACTTTCTCCCCCAACTATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp GGCTGCAGTTCAGCGATGCTCTCGATCTTTCGCTCCTaGCAGTTTACGTTGAGGCCCAGATCAGAGATCTGC +
Preference number: 6 (lower is better)
Translates to: GCSSAMLSIFRS*QFTLRPRSEIC
Trigger: GCAGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGAGCGAAAGATCGAGAGCATCGCTGAACTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp ATTTGGGATATTCCGGGAGGCTATTGCCGGCGGGGGTaGTGGAGCAGTGTTTGTCTGGTTCTAAAATGCCCC +
Preference number: 6 (lower is better)
Translates to: IWDIPGGYCRRG*WSSVCLVLKCP
Trigger: GGGGCATTTTAGAACCAGACAAACACTGCTCCACCACCCCCGCCGGCAATAGCCTCCCGGAATATCCCAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 90 bp TTTTTGGGCGCCTTACAGATCACCTCGTCCACTAGGACGCCCACTTaGAGCTGCTCCACCCACAGCTTCATGCCCACAATGTCACAGGTA +
Preference number: 6 (lower is better)
Translates to: FLGALQITSSTRTPT*SCSTHSFMPTMSQV
Trigger: TACCTGTGACATTGTGGGCATGAAGCTGTGGGTGGAGCAGCTCAAAGTGGGCGTCCTAGTGGACGAGGTGATCTGTAAGGCGCCCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 90 bp AGCAGCTCCGACTTAATGGAGCGCATGTCGGTCTCAGCGAATTTTTaGGGCGCCTTACAGATCACCTCGTCCACTAGGACGCCCACTTTG +
Preference number: 6 (lower is better)
Translates to: SSSDLMERMSVSANF*GALQITSSTRTPTL
Trigger: CAAAGTGGGCGTCCTAGTGGACGAGGTGATCTGTAAGGCGCCCAAAAAATTCGCTGAGACCGACATGCGCTCCATTAAGTCGGAGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 90 bp CCGTACACGCTGTACTGCATGTTAAAGGAGCTCACGTCGGAGTTGTaGGTGCTGGTGTGGTCGCTCTGGTTCTTCTTCCTGCGCTTCATG +
Preference number: 6 (lower is better)
Translates to: PYTLYCMLKELTSEL*VLVWSLWFFFLRFM
Trigger: CATGAAGCGCAGGAAGAAGAACCAGAGCGACCACACCAGCACCAACAACTCCGACGTGAGCTCCTTTAACATGCAGTACAGCGTGTACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 72 bp CGATGCTCTCGATCTTTCGCTCCTGGCAGTTTACGTTaGGGCCCAGATCAGAGATCTGCAGGTTGCAAGAGC +
Preference number: 6 (lower is better)
Translates to: RCSRSFAPGSLR*GPDQRSAGCKS
Trigger: GCTCTTGCAACCTGCAGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGAGCGAAAGATCGAGAGCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp GCGATGCTCTCGATCTTTCGCTCCTGGCAGTTTACGTaGAGGCCCAGATCAGAGATCTGCAGGTTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: AMLSIFRSWQFT*RPRSEICRLQE
Trigger: CTCTTGCAACCTGCAGATCTCTGATCTGGGCCTCAACGTAAACTGCCAGGAGCGAAAGATCGAGAGCATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp TGGTCCAAAACTCCACTCACTGGCAAGGAGGTGAAGTaGTTACTCCTCAGGTTTAGCCTGAGGAGGGTCAAG +
Preference number: 6 (lower is better)
Translates to: WSKTPLTGKEVK*LLLRFSLRRVK
Trigger: CTTGACCCTCCTCAGGCTAAACCTGAGGAGTAACCACTTCACCTCCTTGCCAGTGAGTGGAGTTTTGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp GACTTAATGGAGCGCATGTCGGTCTCAGCGAATTTTTaGGGCGCCTTACAGATCACCTCGTCCACTAGGACG +
Preference number: 6 (lower is better)
Translates to: DLMERMSVSANF*GALQITSSTRT
Trigger: CGTCCTAGTGGACGAGGTGATCTGTAAGGCGCCCAAAAAATTCGCTGAGACCGACATGCGCTCCATTAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp CTGTACTGCATGTTAAAGGAGCTCACGTCGGAGTTGTaGGTGCTGGTGTGGTCGCTCTGGTTCTTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: LYCMLKELTSEL*VLVWSLWFFFL
Trigger: CAGGAAGAAGAACCAGAGCGACCACACCAGCACCAACAACTCCGACGTGAGCTCCTTTAACATGCAGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp ACGCTGTACTGCATGTTAAAGGAGCTCACGTCGGAGTaGTTGGTGCTGGTGTGGTCGCTCTGGTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: TLYCMLKELTSE*LVLVWSLWFFF
Trigger: GAAGAAGAACCAGAGCGACCACACCAGCACCAACAACTCCGACGTGAGCTCCTTTAACATGCAGTACAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 72 bp GGACCGGGTCAAAAGTTCCAGACTGAATCTCGCGGATaGGATTGTACTGGAGGAAGAGATACTGCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: GPGQKFQTESRG*DCTGGRDTAGS
Trigger: AGAGCCTGCAGTATCTCTTCCTCCAGTACAATCTCATCCGCGAGATTCAGTCTGGAACTTTTGACCCGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 72 bp AGCTGGAGGTTTGGGACCGGGTCAAAAGTTCCAGACTaGATCTCGCGGATGAGATTGTACTGGAGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: SWRFGTGSKVPD*ISRMRLYWRKR
Trigger: TCTCTTCCTCCAGTACAATCTCATCCGCGAGATTCAGTCTGGAACTTTTGACCCGGTCCCAAACCTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 72 bp GATAGAGGAGGGTGTGGGCGTGGAAACTACTACATCTaGATAGTCAGGGCACAGCAGCTCCGACTTAATGGA +
Preference number: 6 (lower is better)
Translates to: DRGGCGRGNYYI*IVRAQQLRLNG
Trigger: TCCATTAAGTCGGAGCTGCTGTGCCCTGACTATTCAGATGTAGTAGTTTCCACGCCCACACCCTCCTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp CTGCGGCCTCATCTCGTAGTCAGAAATAAGTCTCCTTaGGCAAAGTTCCTGCTTGGATACCTCGTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: LRPHLVVRNKSP*AKFLLGYLVQV
Trigger: GACTTGGACGAGGTATCCAAGCAGGAACTTTGCCCAAGGAGACTTATTTCTGACTACGAGATGAGGCCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp TCCCTTCCCCAGATGCGGCGCACAATCGTCATTAGTTaGAACTCTCTATCACCGACATCCTTTGGGGTTTCT +
Preference number: 6 (lower is better)
Translates to: SLPQMRRTIVIS*NSLSPTSFGVS
Trigger: AGAAACCCCAAAGGATGTCGGTGATAGAGAGTTCCAACTAATGACGATTGTGCGCCGCATCTGGGGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683689.1
CDS GCA 72 bp CACAAACTACATCCCCCACCAGGGCTGAATAGGAGATaGTGTCCAACCAATCCTTTAGAGAGATCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: HKLHPPPGLNRR*CPTNPLERSAH
Trigger: GTGAGCTGATCTCTCTAAAGGATTGGTTGGACAGCATCTCCTATTCAGCCCTGGTGGGGGATGTAGTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp GCAGGAGGTTGTTATTCAAGAATAGCAGCTGGAGGTTaGGGACCGGGTCAAAAGTTCCAGACTGAATCTCGC +
Preference number: 6 (lower is better)
Translates to: AGGCYSRIAAGG*GPGQKFQTESR
Trigger: GCGAGATTCAGTCTGGAACTTTTGACCCGGTCCCAAACCTCCAGCTGCTATTCTTGAATAACAACCTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 72 bp ATCCCAAGGATTGTCATGCAGGTCGATTTGGATGAGTaGCTTCAGCTGGTCCAAAACTCCACTCACTGGCAA +
Preference number: 6 (lower is better)
Translates to: IPRIVMQVDLDE*LQLVQNSTHWQ
Trigger: TTGCCAGTGAGTGGAGTTTTGGACCAGCTGAAGTCACTCATCCAAATCGACCTGCATGACAATCCTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp TTGTTTAGATGCAATCTCCTCAAACCCCGTAGCCCATaGAAAGCCCCGGTCTCAATGTCCTGGATAACATTG +
Preference number: 6 (lower is better)
Translates to: LFRCNLLKPRSP*KAPVSMSWITL
Trigger: CAATGTTATCCAGGACATTGAGACCGGGGCTTTCCATGGGCTACGGGGTTTGAGGAGATTGCATCTAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp TCTCTGTCAGATACATTTTCTTGGGATTGTAGGGCTTaGGCTGCAGTTCAGCGATGCTCTCGATCTTTCGCT +
Preference number: 6 (lower is better)
Translates to: SLSDTFSWDCRA*AAVQRCSRSFA
Trigger: AGCGAAAGATCGAGAGCATCGCTGAACTGCAGCCCAAGCCCTACAATCCCAAGAAAATGTATCTGACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS TCA 72 bp TACAATCCCAAGGATTGTCATGCAGGTCGATTTGGATaGGTGACTTCAGCTGGTCCAAAACTCCACTCACTG +
Preference number: 6 (lower is better)
Translates to: YNPKDCHAGRFG*VTSAGPKLHSL
Trigger: CAGTGAGTGGAGTTTTGGACCAGCTGAAGTCACTCATCCAAATCGACCTGCATGACAATCCTTGGGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp GTTCAAAAGGTTTCCGGACAACAAGAGGTGGTAGATTaGGAAACGGGGAGGGCTAATTTCAGAGAGACTGAT +
Preference number: 6 (lower is better)
Translates to: VQKVSGQQEVVD*ETGRANFRETD
Trigger: ATCAGTCTCTCTGAAATTAGCCCTCCCCGTTTCCCAATCTACCACCTCTTGTTGTCCGGAAACCTTTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp TCATCTCGCAGAAGTTCCAGTTTATTATTGTTTAGATaGAATCTCCTCAAACCCCGTAGCCCATGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: SSRRSSSLLLFR*NLLKPRSPWKA
Trigger: GGCTTTCCATGGGCTACGGGGTTTGAGGAGATTGCATCTAAACAATAATAAACTGGAACTTCTGCGAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp ATTGTCACAGATTTCCCCATAATAATCGATGGTTTCTaGACACGAAAGGACGAGAGATGTTACAGCAAACGC +
Preference number: 6 (lower is better)
Translates to: IVTDFPIIIDGF*TRKDERCYSKR
Trigger: GCGTTTGCTGTAACATCTCTCGTCCTTTCGTGTGCAGAAACCATCGATTATTATGGGGAAATCTGTGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CCA 72 bp GACATGCATTGTCACAGATTTCCCCATAATAATCGATaGTTTCTGCACACGAAAGGACGAGAGATGTTACAG +
Preference number: 6 (lower is better)
Translates to: DMHCHRFPHNNR*FLHTKGREMLQ
Trigger: CTGTAACATCTCTCGTCCTTTCGTGTGCAGAAACCATCGATTATTATGGGGAAATCTGTGACAATGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp AGGAAGGTATCATCTCGCAGAAGTTCCAGTTTATTATaGTTTAGATGCAATCTCCTCAAACCCCGTAGCCCA +
Preference number: 6 (lower is better)
Translates to: RKVSSRRSSSLL*FRCNLLKPRSP
Trigger: TGGGCTACGGGGTTTGAGGAGATTGCATCTAAACAATAATAAACTGGAACTTCTGCGAGATGATACCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS GCA 72 bp AAACTGGACAAAAGATTGTCATTGAGGATAAGCACCTaGAACAAATGCAGTTTCCCAAAAGCATTGGGTTCA +
Preference number: 6 (lower is better)
Translates to: KLDKRLSLRIST*NKCSFPKALGS
Trigger: TGAACCCAATGCTTTTGGGAAACTGCATTTGTTGCAGGTGCTTATCCTCAATGACAATCTTTTGTCCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1
CDS CAA 72 bp AAACGGAAAAGATTGTTGGGTAAACTGGACAAAAGATaGTCATTGAGGATAAGCACCTGCAACAAATGCAGT +
Preference number: 6 (lower is better)
Translates to: KRKRLLGKLDKR*SLRISTCNKCS
Trigger: ACTGCATTTGTTGCAGGTGCTTATCCTCAATGACAATCTTTTGTCCAGTTTACCCAACAATCTTTTCCGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325089.7
ENST00000683689.1