RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLITRK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000179542

Ensembl transcript IDs: ENST00000338017.8, ENST00000356928.2, ENST00000596188.2

Found 495 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCACAGTGACTAATGGGATGAGCACTAGAAATGATGCCAAACCTTaGTTTGATGCCACTTGTCTACATAACAGAAGTGGCTGGAACCCA +
Preference number: 1 (lower is better)
Translates to: TTVTNGMSTRNDAKP*FDATCLHNRSGWNP
Trigger: TGGGTTCCAGCCACTTCTGTTATGTAGACAAGTGGCATCAAATCAAGGTTTGGCATCATTTCTAGTGCTCATCCCATTAGTCACTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR TCA 90 bp TCCACTGCACAACATGCCTTCCTGCAGCTATTAACCAGCAGCGTCTaGCATGATCTAGTATTTGTGAGGTGCCAACTAAGAGAAATATAT +
Preference number: 1 (lower is better)
Translates to: STAQHAFLQLLTSSV*HDLVFVRCQLREIY
Trigger: ATATATTTCTCTTAGTTGGCACCTCACAAATACTAGATCATGTCAGACGCTGCTGGTTAATAGCTGCAGGAAGGCATGTTGTGCAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR CCA 90 bp TCCAGTTCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTaGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAAAGCACA +
Preference number: 1 (lower is better)
Translates to: SSSTNLIYVQDKGPS*YRCTSFLEFALQST
Trigger: TGTGCTTTGTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGAACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR TCA 90 bp TGCACAACATGCCTTCCTGCAGCTATTAACCAGCAGCGTCTGACATaGTCTAGTATTTGTGAGGTGCCAACTAAGAGAAATATATTGTTC +
Preference number: 1 (lower is better)
Translates to: CTTCLPAAINQQRLT*SSICEVPTKRNILF
Trigger: GAACAATATATTTCTCTTAGTTGGCACCTCACAAATACTAGATCATGTCAGACGCTGCTGGTTAATAGCTGCAGGAAGGCATGTTGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR CCA 90 bp TTCTCTCCTGGTTCTGGGTCCTACAGTCAGTGGAAATGTCAATTATaGATTAATGAGAAGCTTGAATCTTTATTCTCAATAGCAATTATT +
Preference number: 1 (lower is better)
Translates to: FSPGSGSYSQWKCQL*INEKLESLFSIAII
Trigger: AATAATTGCTATTGAGAATAAAGATTCAAGCTTCTCATTAATCCATAATTGACATTTCCACTGACTGTAGGACCCAGAACCAGGAGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTTGGCAATAGAGTTTaGAGTATCCCCACAGGACTC +
Preference number: 2 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSFGNRV*SIPTGL
Trigger: GAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTTAATGAGACACCCTTaGAAACACCTGCCTCCATGC +
Preference number: 2 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYLMRHP*KHLPPC
Trigger: GCATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCACGAAGGTTTTGCATTaGGGTACAAAACAGATTTGC +
Preference number: 2 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTTKVLH*GTKQIC
Trigger: GCAAATCTGTTTTGTACCCCAATGCAAAACCTTCGT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR CAA 90 bp AAAAATAGCTTTGGGTGCGCTCACACAGTAAGCACTCTGCTTATTTaGGACAACCTTGAAGGATTGTGGGTGTTTCACGTAACTGAGAAC +
Preference number: 2 (lower is better)
Translates to: KNSFGCAHTVSTLLI*DNLEGLWVFHVTEN
Trigger: GTTCTCAGTTACGTGAAACACCCACAATCCTTCAAGGTTGTCCAAAATAAGCAGAGTGCTTACTGTGTGAGCGCACCCAAAGCTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTAGCAAGCTTTTGAGATaGTGGCAGGTACTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCSKLLR*WQVLLP
Trigger: TGGCAAGAGTACCTGCCACCATCTCAAAAGCTTGCT...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR CAA 90 bp TATATGCAGGCAGGCCAAGAAGACAATGTGTTTCTGAATATCACTTaGTTAATCGGGAGCTCCTACAAAAGTTCCGACATCACCCATTAT +
Preference number: 2 (lower is better)
Translates to: YMQAGQEDNVFLNIT*LIGSSYKSSDITHY
Trigger: ATAATGGGTGATGTCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTGTCTTCTTGGCCTGCCTGCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATTTGGCAATAGAGTTTaGAGTATCCCCACAGGACTC +
Preference number: 2 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRFGNRV*SIPTGL
Trigger: GAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTGGTACAAAACAGATTTaGCTCTTGAGGTTAAATTCA +
Preference number: 2 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSGTKQI*LLRLNS
Trigger: TGAATTTAACCTCAAGAGGCAAATCTGTTTTGTACC...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTATTAATGAGACACCCTTaGAAACACCTGCCTCCATGC +
Preference number: 2 (lower is better)
Translates to: SYILPSNLGEMISLVTALLMRHP*KHLPPC
Trigger: GCATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAA...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTTAATGAGACACCCTTaGAAACACCTGCCTCCATGC +
Preference number: 2 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSLMRHP*KHLPPC
Trigger: GCATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTGATAAAGGACCCAGCTaGTACAGGTGTACCAGTTTT +
Preference number: 2 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCDKGPS*YRCTSF
Trigger: AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATC...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTCAGGCAAACTGGCAATaGAATACAGAGGTACTGAAG +
Preference number: 2 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCQANWQ*NTEVLK
Trigger: CTTCAGTACCTCTGTATTCCATTGCCAGTTTGCCTG...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR CAA 90 bp GAGATGGTGGCAGGTACTCTTGCCATTGAGAATTCTGCAGAAACCTaGAAACATCTTCAGAACATCACCACACTGAATAAAAGTATCATT +
Preference number: 2 (lower is better)
Translates to: EMVAGTLAIENSAET*KHLQNITTLNKSII
Trigger: AATGATACTTTTATTCAGTGTGGTGATGTTCTGAAGATGTTTCAAGGTTTCTGCAGAATTCTCAATGGCAAGAGTACCTGCCACCATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR CAA 90 bp CAAGAAGCCCATGATGTGTCAGCCCACATTAGAAATGAGCACTTCTaGGATTTTATAGGTTTGCATCCAAGTTCCACTAAAAATGCTGTA +
Preference number: 2 (lower is better)
Translates to: QEAHDVSAHIRNEHF*DFIGLHPSSTKNAV
Trigger: TACAGCATTTTTAGTGGAACTTGGATGCAAACCTATAAAATCCAAGAAGTGCTCATTTCTAATGTGGGCTGACACATCATGGGCTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCTGCCACTTGCAATCATaGGGAATGGCTATGTTTACC +
Preference number: 2 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSACHLQS*GMAMFT
Trigger: GGTAAACATAGCCATTCCTCATGATTGCAAGTGGCA...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAAAAAATAGCTTTGGGTaGGCTCACACAGTAAGCACT +
Preference number: 2 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRKNSFG*AHTVST
Trigger: AGTGCTTACTGTGTGAGCGCACCCAAAGCTATTTTT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAGATAAAGGACCCAGCTaGTACAGGTGTACCAGTTTT +
Preference number: 2 (lower is better)
Translates to: SYILPSNLGEMISLVTALDKGPS*YRCTSF
Trigger: AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATC...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAAACCTTGAAGGATTGTaGGTGTTTCACGTAACTGAG +
Preference number: 2 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRNLEGL*VFHVTE
Trigger: CTCAGTTACGTGAAACACCCACAATCCTTCAAGGTT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAGTGTACCAGTTTTCTTaGGTTTGCTTTACAAAGCAC +
Preference number: 2 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRVYQFS*VCFTKH
Trigger: GTGCTTTGTAAAGCAAACTCAAGAAAACTGGTACAC...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCAAGCTCATAGAATCCTaGAAAGCAAGACAACCGATG +
Preference number: 2 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAKLIES*KARQPM
Trigger: CATCGGTTGTCTTGCTTTTCAGGATTCTATGAGCTT...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTATGTAGTTGCAGACTGTaGACTCATCTGAAACCAATG +
Preference number: 2 (lower is better)
Translates to: SYILPSNLGEMISLVTALCSCRL*THLKPM
Trigger: CATTGGTTTCAGATGAGTTCACAGTCTGCAACTACA...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAAGGTACTCTTGCCATTaGGAATTCTGCAGAAACCTT +
Preference number: 2 (lower is better)
Translates to: SYILPSNLGEMISLVTALRYSCH*EFCRNL
Trigger: AAGGTTTCTGCAGAATTCTCAATGGCAAGAGTACCT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGGTACAAAACAGATTTaGCTCTTGAGGTTAAATTCA +
Preference number: 2 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFGTKQI*LLRLNS
Trigger: TGAATTTAACCTCAAGAGGCAAATCTGTTTTGTACC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAAAAAATAGCTTTGGGTaGGCTCACACAGTAAGCACT +
Preference number: 2 (lower is better)
Translates to: SYILPSNLGEMISLVTALKNSFG*AHTVST
Trigger: AGTGCTTACTGTGTGAGCGCACCCAAAGCTATTTTT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCGACTGTGAACTCATCTaGAACCAATGCAAGCATTTT +
Preference number: 2 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSADCELI*NQCKHF
Trigger: AAAATGCTTGCATTGGTTTCAGATGAGTTCACAGTC...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGACTGTGAACTCATCTaGAACCAATGCAAGCATTTT +
Preference number: 2 (lower is better)
Translates to: STCICYLYCSHLQHTYVYDCELI*NQCKHF
Trigger: AAAATGCTTGCATTGGTTTCAGATGAGTTCACAGTC...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAACGAAGGTTTTGCATTaGGGTACAAAACAGATTTGC +
Preference number: 2 (lower is better)
Translates to: SYILPSNLGEMISLVTALTKVLH*GTKQIC
Trigger: GCAAATCTGTTTTGTACCCCAATGCAAAACCTTCGT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTATGCAATCATGAGGAATaGCTATGTTTACCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: SYILPSNLGEMISLVTALCNHEE*LCLPSW
Trigger: CCAAGAAGGTAAACATAGCCATTCCTCATGATTGCA...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACTTTAGCAGAAGAGTATaGGATAGCCAATATGCTACA +
Preference number: 2 (lower is better)
Translates to: STCICYLYCSHLQHTYVYFSRRV*DSQYAT
Trigger: TGTAGCATATTGGCTATCTCATACTCTTCTGCTAAA...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACCTAAAAATGCTGTACTaGTGTACATATCATACCTCC +
Preference number: 2 (lower is better)
Translates to: STCICYLYCSHLQHTYVYLKMLY*CTYHTS
Trigger: GGAGGTATGATATGTACATCAGTACAGCATTTTTAG...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR TCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGGAATACAGAGGTACTaGAGGGTTTCTAAAAGTATT +
Preference number: 2 (lower is better)
Translates to: STCICYLYCSHLQHTYVYGIQRY*RVSKSI
Trigger: AATACTTTTAGAAACCCTTCAGTACCTCTGTATTCC...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCGGTACAAAACAGATTTaGCTCTTGAGGTTAAATTCA +
Preference number: 2 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSGTKQI*LLRLNS
Trigger: TGAATTTAACCTCAAGAGGCAAATCTGTTTTGTACC...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACTCAGATCATCACAAATaGTATCTAACTCACGTTGAT +
Preference number: 2 (lower is better)
Translates to: STCICYLYCSHLQHTYVYSDHHK*YLTHVD
Trigger: ATCAACGTGAGTTAGATAGCATTTGTGATGATCTGA...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCATCTATATATATATATaGAGGCAGGCCAAGAAGACA +
Preference number: 2 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAIYIYI*RQAKKT
Trigger: TGTCTTCTTGGCCTGCCTGCATATATATATATAGAT...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR GCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACAGTTACATTCATTTCTaGCCTCAAGTTAACCGTAAT +
Preference number: 2 (lower is better)
Translates to: STCICYLYCSHLQHTYVYSYIHF*PQVNRN
Trigger: ATTACGGTTAACTTGAGGGCAGAAATGAATGTAACT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAAAGAGACGAAGGTTTaGCATTGGGGTACAAAACAG +
Preference number: 3 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTKETKV*HWGTKQ
Trigger: CTGTTTTGTACCCCAATGCAAAACCTTCGTCTCTTT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR TCA 72 bp CAACATGCCTTCCTGCAGCTATTAACCAGCAGCGTCTaGCATGATCTAGTATTTGTGAGGTGCCAACTAAGA +
Preference number: 3 (lower is better)
Translates to: QHAFLQLLTSSV*HDLVFVRCQLR
Trigger: TCTTAGTTGGCACCTCACAAATACTAGATCATGTCAGACGCTGCTGGTTAATAGCTGCAGGAAGGCATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR TCA 72 bp TGCCTTCCTGCAGCTATTAACCAGCAGCGTCTGACATaGTCTAGTATTTGTGAGGTGCCAACTAAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: CLPAAINQQRLT*SSICEVPTKRN
Trigger: ATTTCTCTTAGTTGGCACCTCACAAATACTAGATCATGTCAGACGCTGCTGGTTAATAGCTGCAGGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTGTTAATGAGACACCCTaGGAAACACCTGCCTCCATG +
Preference number: 3 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCVNETP*ETPASM
Trigger: CATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAAC...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCTACTTGACACATCTTaGCAGCTACAGTTAATGAGA +
Preference number: 3 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSLLDTS*QLQLMR
Trigger: TCTCATTAACTGTAGCTGCAAAGATGTGTCAAGTAG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR TCA 72 bp GAGAACAAAGCTTACTATGATTTTCACACACTTCCATaGGCAATATCCACTGCACAACATGCCTTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: ENKAYYDFHTLP*AISTAQHAFLQ
Trigger: CTGCAGGAAGGCATGTTGTGCAGTGGATATTGCTCATGGAAGTGTGTGAAAATCATAGTAAGCTTTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCGTTAATGAGACACCCTaGGAAACACCTGCCTCCATG +
Preference number: 3 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSVNETP*ETPASM
Trigger: CATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAAC...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTTAATGAGACACCCTaGGAAACACCTGCCTCCATG +
Preference number: 3 (lower is better)
Translates to: STCICYLYCSHLQHTYVYVNETP*ETPASM
Trigger: CATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAAC...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAAAGAGACGAAGGTTTaGCATTGGGGTACAAAACAG +
Preference number: 3 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFKETKV*HWGTKQ
Trigger: CTGTTTTGTACCCCAATGCAAAACCTTCGTCTCTTT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR TCA 72 bp ACTAATGGGATGAGCACTAGAAATGATGCCAAACCTTaGTTTGATGCCACTTGTCTACATAACAGAAGTGGC +
Preference number: 3 (lower is better)
Translates to: TNGMSTRNDAKP*FDATCLHNRSG
Trigger: GCCACTTCTGTTATGTAGACAAGTGGCATCAAATCAAGGTTTGGCATCATTTCTAGTGCTCATCCCATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR CCA 72 bp ACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTaGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTA +
Preference number: 3 (lower is better)
Translates to: TNLIYVQDKGPS*YRCTSFLEFAL
Trigger: TAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAGACAACCTTGAAGGATaGTGGGTGTTTCACGTAACT +
Preference number: 3 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRDNLEG*WVFHVT
Trigger: AGTTACGTGAAACACCCACAATCCTTCAAGGTTGTC...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCGACAACCTTGAAGGATaGTGGGTGTTTCACGTAACT +
Preference number: 3 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSADNLEG*WVFHVT
Trigger: AGTTACGTGAAACACCCACAATCCTTCAAGGTTGTC...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCCTACTTGACACATCTTaGCAGCTACAGTTAATGAGA +
Preference number: 3 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSLLDTS*QLQLMR
Trigger: TCTCATTAACTGTAGCTGCAAAGATGTGTCAAGTAG...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTCTTAAACCCACTGTATaGGTCAATATAGTCAGTTAC +
Preference number: 3 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCLKPTV*VNIVSY
Trigger: GTAACTGACTATATTGACCAATACAGTGGGTTTAAG...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACAATCTTTACACGGAGTaGTTACAATGCCACAAATCA +
Preference number: 3 (lower is better)
Translates to: STCICYLYCSHLQHTYVYNLYTE*LQCHKS
Trigger: TGATTTGTGGCATTGTAACAACTCCGTGTAAAGATT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCTAGAGCCCAGCGTCTaGTGCAGGGCCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSLEPSV*CRARGA
Trigger: GGCGCCGCGGGCCCTGCACCAGACGCTGGGCTCTAG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACGGGCCCGCGGCGCCGTaGCCTGCGCTGCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYGPAAP*PALLFP
Trigger: TGGAAACAGCAGCGCAGGTCACGGCGCCGCGGGCCC...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS-3UTR GCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCGCGGCGCCGTGACCTaGGCTGCTGTTTCCACGATG +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFRGAVT*AAVSTM
Trigger: CATCGTGGAAACAGCAGCGCAGGTCACGGCGCCGCG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS-3UTR GCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCCGCCGTGACCTGCGCTaGTGTTTCCACGATGGTATC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTRRDLR*CFHDGI
Trigger: GATACCATCGTGGAAACAGCAGCGCAGGTCACGGCG...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGAACGGAGGGCTCCTaGAATACTTCTCCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTRTEGS*NTSPWR
Trigger: CCGCCACGGAGAAGTATTCCAGGAGCCCTCCGTTCT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCTGAAGGGTGTGTTTTaGAGAAGCAAGGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGLKGVF*RSKVPG
Trigger: GCCCGGCACCTTGCTTCTGCAAAACACACCCTTCAG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCGTGGCGGTCGATCCTaGAAGGAGCCTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSRGGRS*KEPSWE
Trigger: TTCCCAAGAAGGCTCCTTCCAGGATCGACCGCCACG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR TCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTATAGGGGATAGGGGTTaGGGAAAGAGAGGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSIGDRG*GKRGVG
Trigger: TCCCACGCCTCTCTTTCCTCAACCCCTATCCCCTAT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR GCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGCACGTCAAAATCACTaGCGGTGCCCATGGGACATA +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTARQNH*RCPWDI
Trigger: TATGTCCCATGGGCACCGGCAGTGATTTTGACGTGC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTGCACGTCAAAATCACTaGCGGTGCCCATGGGACATA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGARQNH*RCPWDI
Trigger: TATGTCCCATGGGCACCGGCAGTGATTTTGACGTGC...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGAGATGGAGGCAGGATaGGCACGTCAAAATCACTGC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTEMEAG*ARQNHC
Trigger: GCAGTGATTTTGACGTGCGCATCCTGCCTCCATCTC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTCCCCAGGCCTTCGTaGTTCACTGTGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGFPRPS*FTVGFL
Trigger: CAAGAAACCCACAGTGAAGCACGAAGGCCTGGGGAA...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTCATGCTTCCTTAGCTaGAGCTGCATGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGSCFLS*SCMEPQ
Trigger: CTGTGGCTCCATGCAGCTGCAGCTAAGGAAGCATGA...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTGGCTGCGAGTGGGGTaGAAAAATAAAGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTWLRVG*KNKAQP
Trigger: GGGTTGGGCTTTATTTTTGCACCCCACTCGCAGCCA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS-3UTR GCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACAACCCGCGGGCCACTaGCCCGAGCCTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALQPAGH*PEPQIH
Trigger: GTGGATCTGAGGCTCGGGGCAGTGGCCCGCGGGTTG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS-3UTR CCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTATTTTCCAGCTGAGATaGAGGCAGGATGCGCACGTC +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGIFQLR*RQDAHV
Trigger: GACGTGCGCATCCTGCCTCCATCTCAGCTGGAAAAT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCATTTTCCAGCTGAGATaGAGGCAGGATGCGCACGTC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTIFQLR*RQDAHV
Trigger: GACGTGCGCATCCTGCCTCCATCTCAGCTGGAAAAT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTAATAGACAGAGGCACTaGCCCACCAGGAGGACTTCG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSNRQRH*PTRRTS
Trigger: CGAAGTCCTCCTGGTGGGCCAGTGCCTCTGTCTATT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAGAGAGGCGTGGGACTaGGAGAGATGCCGCACTTGC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFREAWD*ERCRTC
Trigger: GCAAGTGCGGCATCTCTCCCAGTCCCACGCCTCTCT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTACTGCTTTAATGCACTaGGCCCAAGAAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGTALMH*AQERLL
Trigger: GAGGAGCCTTTCTTGGGCTCAGTGCATTAAAGCAGT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTAAGACACAATCTGACTaGGATTGCGGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGKTQSD*DCGWRG
Trigger: CCCTCTCCAACCGCAATCTCAGTCAGATTGTGTCTT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCCAAAATCACTGCCGGTaGCCATGGGACATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTQNHCR*PWDIAL
Trigger: AAGAGCTATGTCCCATGGGCACCGGCAGTGATTTTG...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTACAGTCCCATGGGTTaGCCTCCAAGTCAATCTGTG +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTYSPMG*PPSQSV
Trigger: CACAGATTGACTTGGAGGGCAACCCATGGGACTGTA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTCATGCTTCCTTAGCTaGAGCTGCATGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSSCFLS*SCMEPQ
Trigger: CTGTGGCTCCATGCAGCTGCAGCTAAGGAAGCATGA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCACTGCCGGTGCCCATaGGACATAGCTCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSHCRCP*DIALVC
Trigger: ACAAACAAGAGCTATGTCCCATGGGCACCGGCAGTG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCACTGCCGGTGCCCATaGGACATAGCTCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFHCRCP*DIALVC
Trigger: ACAAACAAGAGCTATGTCCCATGGGCACCGGCAGTG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCACCTTAGAACTCCGTaGGCCTTTGGTGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSHLRTP*AFGAEW
Trigger: CCATTCTGCACCAAAGGCCCACGGAGTTCTAAGGTG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTGAGCACATTCTCAACTaGCACGCAGGAACACACATT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGEHILN*HAGTHI
Trigger: AATGTGTGTTCCTGCGTGTCAGTTGAGAATGTGCTC...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTACTGCTTTAATGCACTaGGCCCAAGAAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSTALMH*AQERLL
Trigger: GAGGAGCCTTTCTTGGGCTCAGTGCATTAAAGCAGT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTACTGCTTTAATGCACTaGGCCCAAGAAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFTALMH*AQERLL
Trigger: GAGGAGCCTTTCTTGGGCTCAGTGCATTAAAGCAGT...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTAAGACACAATCTGACTaGGATTGCGGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFKTQSD*DCGWRG
Trigger: CCCTCTCCAACCGCAATCTCAGTCAGATTGTGTCTT...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGTAAGAGATTGCAACTaGTCAAGGACCCCGCTGACA +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFVRDCN*SRTPLT
Trigger: TGTCAGCGGGGTCCTTGATCAGTTGCAATCTCTTAC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCAGGTGCAGGGCTTGTaGATGGTGCAGACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYQVQGL*MVQTAY
Trigger: ATAAGCCGTCTGCACCATTCACAAGCCCTGCACCTG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCAGGTGCAGGGCTTGTaGATGGTGCAGACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFQVQGL*MVQTAY
Trigger: ATAAGCCGTCTGCACCATTCACAAGCCCTGCACCTG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTGGAGAGGGCTTTGCCTaGAACGATTCCAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSGEGFA*NDSRDL
Trigger: AAGATCTCTGGAATCGTTGCAGGCAAAGCCCTCTCC...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCTGAAGGGTGTGTTTTaGAGAAGCAAGGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYLKGVF*RSKVPG
Trigger: GCCCGGCACCTTGCTTCTGCAAAACACACCCTTCAG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTACAGTCCCATGGGTTaGCCTCCAAGTCAATCTGTG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSYSPMG*PPSQSV
Trigger: CACAGATTGACTTGGAGGGCAACCCATGGGACTGTA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTCTCCAAAGGGGCTaGCAGTGGGAAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFLLQRG*QWEGTQ
Trigger: CTGTGTTCCTTCCCACTGGCAGCCCCTTTGGAGAAG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCCTCGTATATCCAGATaGGTCAAAGATGCGAATCGG +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGPRISR*VKDANR
Trigger: CCGATTCGCATCTTTGACCCATCTGGATATACGAGG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTACTGCAAATTTGGCATaGAGTCAAAGGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGTANLA*SQRCLL
Trigger: CAGCAGGCACCTTTGACTCCATGCCAAATTTGCAGT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTACAAGTACAGTCCCATaGGTTGCCCTCCAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGTSTVP*VALQVN
Trigger: ATTGACTTGGAGGGCAACCCATGGGACTGTACTTGT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAATAGACAGAGGCACTaGCCCACCAGGAGGACTTCG +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYNRQRH*PTRRTS
Trigger: CGAAGTCCTCCTGGTGGGCCAGTGCCTCTGTCTATT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAATAGACAGAGGCACTaGCCCACCAGGAGGACTTCG +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFNRQRH*PTRRTS
Trigger: CGAAGTCCTCCTGGTGGGCCAGTGCCTCTGTCTATT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAGAGGAAAGAGAGGCGTaGGACTGGGAGAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFREEREA*DWERCR
Trigger: GCGGCATCTCTCCCAGTCCCACGCCTCTCTTTCCTC...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCCATAACAGAAGTGGCTaGAACCCAAAGCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTHNRSG*NPKLCA
Trigger: AGCACAGAGCTTTGGGTTCCAGCCACTTCTGTTATG...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGAAAGTGGCTGCGAGTaGGGTGCAAAAATAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFESGCE*GAKIKP
Trigger: GGGCTTTATTTTTGCACCCCACTCGCAGCCACTTTC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGAGCACATTCTCAACTaGCACGCAGGAACACACATT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFEHILN*HAGTHI
Trigger: AATGTGTGTTCCTGCGTGTCAGTTGAGAATGTGCTC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTGTCCTTCAAAGTCAGTaGAGTCTGATACGTCCACAT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGVLQSQ*SLIRPH
Trigger: ATGTGGACGTATCAGACTTCACTGACTTTGAAGGAC...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGTCCTTCAAAGTCAGTaGAGTCTGATACGTCCACAT +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTVLQSQ*SLIRPH
Trigger: ATGTGGACGTATCAGACTTCACTGACTTTGAAGGAC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTCAATGTTGGCAAACTaGACAGGCGTCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTSMLAN*TGVSHF
Trigger: GAAATGTGAGACGCCTGTTCAGTTTGCCAACATTGA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCCATGAACCCAGTTTCTaGCTCTTTCAAGCCACAAGT +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTHEPSF*LFQATS
Trigger: ACTTGTGGCTTGAAAGAGTCAGAAACTGGGTTCATG...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCATGAACCCAGTTTCTaGCTCTTTCAAGCCACAAGT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGHEPSF*LFQATS
Trigger: ACTTGTGGCTTGAAAGAGTCAGAAACTGGGTTCATG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCTGTCCTGGAGGATCTaGAAACATGAACCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSLSWRI*KHEPSF
Trigger: GAAACTGGGTTCATGTTTTCAGATCCTCCAGGACAG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTGGCTTTAGCCTAAAGTaGGACTATTTAGCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGGFSLK*DYLAGL
Trigger: TAACCCGGCTAAATAGTCTCACTTTAGGCTAAAGCC...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTGCCACTTGCAATCATaGGGAATGGCTATGTTTACC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTCHLQS*GMAMFT
Trigger: GGTAAACATAGCCATTCCTCATGATTGCAAGTGGCA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTACTGAAGTGGAGGGTTaGGTAATTCTCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSTEVEG*VILSWF
Trigger: GAACCAGGAGAGAATTACTCAACCCTCCACTTCAGT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGGGTTATCTTCCAGTTaGAATTCAACGACACGGCCA +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFGLSSS*NSTTRP
Trigger: TGGCCGTGTCGTTGAATTGCAACTGGAAGATAACCC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGCACGTCAAAATCACTaGCGGTGCCCATGGGACATA +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFARQNH*RCPWDI
Trigger: TATGTCCCATGGGCACCGGCAGTGATTTTGACGTGC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACGGTTGGAGAGGGCTTTaGCTGCAACGATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYGWRGL*LQRFQR
Trigger: TCTCTGGAATCGTTGCAGGCAAAGCCCTCTCCAACC...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGGTTGGAGAGGGCTTTaGCTGCAACGATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFGWRGL*LQRFQR
Trigger: TCTCTGGAATCGTTGCAGGCAAAGCCCTCTCCAACC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTTTGGTTTTGTGGTCATaGTTCCTTAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFLVLWS*FLSCSC
Trigger: GCAGCTGCAGCTAAGGAAGCATGACCACAAAACCAA...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCCAGCTCATCAATTGTaGTCAGTCTCTTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGPAHQL*SVSSWY
Trigger: ATACCAGGAAGAGACTGAGCACAATTGATGAGCTGG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGGCAATAGAGTTTaGAGTATCCCCACAGGACTC +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGFGNRV*SIPTGL
Trigger: GAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAA...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTATGAGCAATATCCACTaGACAACATGCCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGMSNIH*TTCLPA
Trigger: TGCAGGAAGGCATGTTGTGCAGTGGATATTGCTCAT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTTGTGACCATTGGGAGTaGTGTAGCCATTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFCDHWE*CSHFPA
Trigger: AGCTGGAAAATGGCTACACCACTCCCAATGGTCACA...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTACAAGTACAGTCCCATaGGTTGCCCTCCAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFTSTVP*VALQVN
Trigger: ATTGACTTGGAGGGCAACCCATGGGACTGTACTTGT...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTTTAGCTGCAGCTGCATaGAGCCACAGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFLAAAA*SHSQDS
Trigger: GGAATCCTGACTGTGGCTCCATGCAGCTGCAGCTAA...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGTCTGGTTGTTTTTCTaGATAGCGGATCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTVWLFF*IADLKA
Trigger: GGCTTTGAGATCCGCTATCCAGAAAAACAACCAGAC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTGTCTGGTTGTTTTTCTaGATAGCGGATCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGVWLFF*IADLKA
Trigger: GGCTTTGAGATCCGCTATCCAGAAAAACAACCAGAC...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGAGCCCTTTAATCCATaGATGTGTGCATGCATGGTA +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTEPFNP*MCACMV
Trigger: TACCATGCATGCACACATCCATGGATTAAAGGGCTC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAAGCTTTTGAGATGGTaGCAGGTACTCTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTKLLRW*QVLLPL
Trigger: CAATGGCAAGAGTACCTGCCACCATCTCAAAAGCTT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCCAGGCAAACTGGCAATaGAATACAGAGGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTQANWQ*NTEVLK
Trigger: CTTCAGTACCTCTGTATTCCATTGCCAGTTTGCCTG...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGACACGTCTGCGGAAAGTaGCTGCGAGTGGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRHVCGK*LRVGCK
Trigger: TTTGCACCCCACTCGCAGCCACTTTCCGCAGACGTG...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTACGATGGTATCTATGTaGTTCCGGACAGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFTMVSM*FRTELL
Trigger: GAGGAGCTCTGTCCGGAATCACATAGATACCATCGT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCATTTGGTCTGTAGACTaGAACCTTCTCACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTIWSVD*NLLTVD
Trigger: GTCAACTGTGAGAAGGTTTCAGTCTACAGACCAAAT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACGTAAGAGATTGCAACTaGTCAAGGACCCCGCTGACA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYVRDCN*SRTPLT
Trigger: TGTCAGCGGGGTCCTTGATCAGTTGCAATCTCTTAC...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTTCAATGTTGGCAAACTaGACAGGCGTCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFSMLAN*TGVSHF
Trigger: GAAATGTGAGACGCCTGTTCAGTTTGCCAACATTGA...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCATGAACCCAGTTTCTaGCTCTTTCAAGCCACAAGT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFHEPSF*LFQATS
Trigger: ACTTGTGGCTTGAAAGAGTCAGAAACTGGGTTCATG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGGTACTCTTGCCATTaGGAATTCTGCAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTRYSCH*EFCRNL
Trigger: AAGGTTTCTGCAGAATTCTCAATGGCAAGAGTACCT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGCTACAGCAAGCTTTTaGGATGGTGGCAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFATASF*DGGRYS
Trigger: AGAGTACCTGCCACCATCTCAAAAGCTTGCTGTAGC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGAATCAAAGCATGTTaGTCTTGGCACTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTRIKAC*SWHCQT
Trigger: AGTCTGACAGTGCCAAGATCAACATGCTTTGATTCT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTCTGAAGGGTGTGTTTTaGAGAAGCAAGGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCLKGVF*RSKVPG
Trigger: GCCCGGCACCTTGCTTCTGCAAAACACACCCTTCAG...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCTGTGGGTTTCTTGTTaGGTCGCAGGACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSLWVSC*VAGQKQ
Trigger: TTGTTTTTGTCCTGCGACGCAACAAGAAACCCACAG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCCAGCTCATCAATTGTaGTCAGTCTCTTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFPAHQL*SVSSWY
Trigger: ATACCAGGAAGAGACTGAGCACAATTGATGAGCTGG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGTTCAAAGCTGTTTaGTCCTCAAGGACCTGTAGG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSLFKAV*SSRTCR
Trigger: CCTACAGGTCCTTGAGGAGCAAACAGCTTTGAACAA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCCCTCAGATCCACGTCTaGGGAAAGTGGCTGCGAGTG +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAPQIHV*GKWLRV
Trigger: CACTCGCAGCCACTTTCCGCAGACGTGGATCTGAGG...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCTGCTGTTTCCACGATaGTATCTATGTGATTCCGGA +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFLLFPR*YLCDSG
Trigger: TCCGGAATCACATAGATACCATCGTGGAAACAGCAG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCACTTCAGTTCAATGTTaGCAAACTGAACAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTTSVQC*QTEQAS
Trigger: AGACGCCTGTTCAGTTTGCCAACATTGAACTGAAGT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCTTCGTGCTTCACTGTaGGTTTCTTGTTGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYLRASL*VSCCVA
Trigger: TGCGACGCAACAAGAAACCCACAGTGAAGCACGAAG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTCCCCAGACCATGAATaGAACTTTCTGATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSSPDHE*NFLIPP
Trigger: AGGAGGAATCAGAAAGTTCCATTCATGGTCTGGGGA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR CAA 72 bp TTTGGGTGCGCTCACACAGTAAGCACTCTGCTTATTTaGGACAACCTTGAAGGATTGTGGGTGTTTCACGTA +
Preference number: 4 (lower is better)
Translates to: FGCAHTVSTLLI*DNLEGLWVFHV
Trigger: TACGTGAAACACCCACAATCCTTCAAGGTTGTCCAAAATAAGCAGAGTGCTTACTGTGTGAGCGCACCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGTTTGTGGAGCTTATTaGAGGCTCCTCGTTCAATAT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFVCGAY*RLLVQY
Trigger: ATATTGAACGAGGAGCCTTCAATAAGCTCCACAAAC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTGTTTGTGGAGCTTATTaGAGGCTCCTCGTTCAATAT +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSVCGAY*RLLVQY
Trigger: ATATTGAACGAGGAGCCTTCAATAAGCTCCACAAAC...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCCAGGTGCAGGGCTTGTaGATGGTGCAGACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSQVQGL*MVQTAY
Trigger: ATAAGCCGTCTGCACCATTCACAAGCCCTGCACCTG...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTGTCCTGGAGGATCTaGAAACATGAACCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFLSWRI*KHEPSF
Trigger: GAAACTGGGTTCATGTTTTCAGATCCTCCAGGACAG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGGATCTCAAAGCCACTaGCACCTATGCTATTATACT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFGSQSH*HLCYYT
Trigger: AGTATAATAGCATAGGTGTCAGTGGCTTTGAGATCC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGTGTACCAGTTTTCTTaGGTTTGCTTTACAAAGCAC +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTVYQFS*VCFTKH
Trigger: GTGCTTTGTAAAGCAAACTCAAGAAAACTGGTACAC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGACTGTGAACTCATCTaGAACCAATGCAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTDCELI*NQCKHF
Trigger: AAAATGCTTGCATTGGTTTCAGATGAGTTCACAGTC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTGTAGTTGCAGACTGTaGACTCATCTGAAACCAATG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSCSCRL*THLKPM
Trigger: CATTGGTTTCAGATGAGTTCACAGTCTGCAACTACA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCAAATCTGGGTGAAATaGTCAGTTTGGTTACTGCTT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGQIWVK*SVWLLL
Trigger: AAGCAGTAACCAAACTGATCATTTCACCCAGATTTG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCAGCAGCGTCTGACATaGTCTAGTATTTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFQQRLT*SSICEV
Trigger: CACCTCACAAATACTAGATCATGTCAGACGCTGCTG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCCTCCCTCAATGTTCTaGAGTTTATTATTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSPPSMF*SLLFPR
Trigger: TCTGGGGAATAATAAACTGCAGAACATTGAGGGAGG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGGGTTATCTTCCAGTTaGAATTCAACGACACGGCCA +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFGLSSS*NSTTRP
Trigger: TGGCCGTGTCGTTGAATTGCAACTGGAAGATAACCC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAGAGATGGAGGCAGGATaGGCACGTCAAAATCACTGC +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFREMEAG*ARQNHC
Trigger: GCAGTGATTTTGACGTGCGCATCCTGCCTCCATCTC...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTTGGTTTTGTGGTCATaGTTCCTTAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYLVLWS*FLSCSC
Trigger: GCAGCTGCAGCTAAGGAAGCATGACCACAAAACCAA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTATGGCAAATAACAACTaGCCCAGACACAATACTAGA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGMANNN*PRHNTR
Trigger: TCTAGTATTGTGTCTGGGGCAGTTGTTATTTGCCAT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCCTTCTCCAAAGGGGCTaGCAGTGGGAAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSLLQRG*QWEGTQ
Trigger: CTGTGTTCCTTCCCACTGGCAGCCCCTTTGGAGAAG...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCCTCGTATATCCAGATaGGTCAAAGATGCGAATCGG +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYPRISR*VKDANR
Trigger: CCGATTCGCATCTTTGACCCATCTGGATATACGAGG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACACTGCAAATTTGGCATaGAGTCAAAGGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYTANLA*SQRCLL
Trigger: CAGCAGGCACCTTTGACTCCATGCCAAATTTGCAGT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATTAGCTGCAGCTGCATaGAGCCACAGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRLAAAA*SHSQDS
Trigger: GGAATCCTGACTGTGGCTCCATGCAGCTGCAGCTAA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTTTAGCTGCAGCTGCATaGAGCCACAGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCLAAAA*SHSQDS
Trigger: GGAATCCTGACTGTGGCTCCATGCAGCTGCAGCTAA...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTACGAAGGTTTTGCATTaGGGTACAAAACAGATTTGC +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGTKVLH*GTKQIC
Trigger: GCAAATCTGTTTTGTACCCCAATGCAAAACCTTCGT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTGCAATCATGAGGAATaGCTATGTTTACCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTCNHEE*LCLPSW
Trigger: CCAAGAAGGTAAACATAGCCATTCCTCATGATTGCA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTTGTAACCAGGCAAACTaGCAATGGAATACAGAGGTA +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFCNQAN*QWNTEV
Trigger: TACCTCTGTATTCCATTGCCAGTTTGCCTGGTTACA...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACATTCTCTCCTGGTTCTaGGTCCTACAGTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYILSWF*VLQSVE
Trigger: TTCCACTGACTGTAGGACCCAGAACCAGGAGAGAAT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCAGGGAGACTGCATGTaGAAAATTCAAGAATGTATT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGQGDCM*KIQECI
Trigger: AATACATTCTTGAATTTTTCACATGCAGTCTCCCTG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGTCCTTCAAAGTCAGTaGAGTCTGATACGTCCACAT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFVLQSQ*SLIRPH
Trigger: ATGTGGACGTATCAGACTTCACTGACTTTGAAGGAC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCAGGTTATGAAGACCTaGAAATATTTCAGGATAGAG +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGQVMKT*KYFRIE
Trigger: CTCTATCCTGAAATATTTTCAGGTCTTCATAACCTG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTAAAGTATCATTCAAATaGCCTATTATCCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGKVSFK*PIIPRP
Trigger: TGGTCTGGGGATAATAGGTCATTTGAATGATACTTT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTAGCAGAAGAGTATaGGATAGCCAATATGCTACA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGFSRRV*DSQYAT
Trigger: TGTAGCATATTGGCTATCTCATACTCTTCTGCTAAA...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTGGAATACAGAGGTACTaGAGGGTTTCTAAAAGTATT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGGIQRY*RVSKSI
Trigger: AATACTTTTAGAAACCCTTCAGTACCTCTGTATTCC...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCGATATGTCAGAATCTaGATTTGTCGAAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGRYVRI*ICRRNQ
Trigger: CTGATTTCTTCGACAAATGCAGATTCTGACATATCG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCGAGATGGAGGCAGGATaGGCACGTCAAAATCACTGC +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSEMEAG*ARQNHC
Trigger: GCAGTGATTTTGACGTGCGCATCCTGCCTCCATCTC...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCGGTTGGAGAGGGCTTTaGCTGCAACGATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSGWRGL*LQRFQR
Trigger: TCTCTGGAATCGTTGCAGGCAAAGCCCTCTCCAACC...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCTATTGCCATTGACGTaGAGCTTCTTCGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSLLPLT*SFFAFK
Trigger: TTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTGTGGGTTTCTTGTTaGGTCGCAGGACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFLWVSC*VAGQKQ
Trigger: TTGTTTTTGTCCTGCGACGCAACAAGAAACCCACAG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTATCATGCTTCCTTAGCTaGAGCTGCATGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALSCFLS*SCMEPQ
Trigger: CTGTGGCTCCATGCAGCTGCAGCTAAGGAAGCATGA...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCCAGCTCATCAATTGTaGTCAGTCTCTTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFPAHQL*SVSSWY
Trigger: ATACCAGGAAGAGACTGAGCACAATTGATGAGCTGG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTTTGTTCAAAGCTGTTTaGTCCTCAAGGACCTGTAGG +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFLFKAV*SSRTCR
Trigger: CCTACAGGTCCTTGAGGAGCAAACAGCTTTGAACAA...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTTTTGGCAATAGAGTTTaGAGTATCCCCACAGGACTC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFFGNRV*SIPTGL
Trigger: GAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAA...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTGAACCCAAAGCTCTGTaGTCAGTACTCATAAATAAA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGEPKAL*SVLINK
Trigger: TTTATTTATGAGTACTGAGCACAGAGCTTTGGGTTC...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACATGAGCAATATCCACTaGACAACATGCCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYMSNIH*TTCLPA
Trigger: TGCAGGAAGGCATGTTGTGCAGTGGATATTGCTCAT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTAAAATTAGACCAAGGTaGTTTCAGCTGATTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGKIRPR*FQLIWS
Trigger: AGACCAAATCAGCTGAAACCACCTTGGTCTAATTTT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCATTTTCCAGCTGAGATaGAGGCAGGATGCGCACGTC +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSIFQLR*RQDAHV
Trigger: GACGTGCGCATCCTGCCTCCATCTCAGCTGGAAAAT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGACTTCGTGCTTCACTGTaGGTTTCTTGTTGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRLRASL*VSCCVA
Trigger: TGCGACGCAACAAGAAACCCACAGTGAAGCACGAAG...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTTTCAAGCCACAAGTGTaGCTCTTGCTCATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFFKPQV*LLLICS
Trigger: AGAACAGATGAGCAAGAGCCACACTTGTGGCTTGAA...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGTCTGGTTGTTTTTCTaGATAGCGGATCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFVWLFF*IADLKA
Trigger: GGCTTTGAGATCCGCTATCCAGAAAAACAACCAGAC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCTGGAATACTTCTCCGTaGCGGTCGATCCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAWNTSP*RSILEG
Trigger: TCCTTCCAGGATCGACCGCCACGGAGAAGTATTCCA...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGCACTCTGCTTATTTTaGACAACCTTGAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFALCLF*TTLKDC
Trigger: ACAATCCTTCAAGGTTGTCCAAAATAAGCAGAGTGC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTGCACTCTGCTTATTTTaGACAACCTTGAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSALCLF*TTLKDC
Trigger: ACAATCCTTCAAGGTTGTCCAAAATAAGCAGAGTGC...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTGCAATCATGAGGAATaGCTATGTTTACCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSCNHEE*LCLPSW
Trigger: CCAAGAAGGTAAACATAGCCATTCCTCATGATTGCA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACGAGCCCTTTAATCCATaGATGTGTGCATGCATGGTA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYEPFNP*MCACMV
Trigger: TACCATGCATGCACACATCCATGGATTAAAGGGCTC...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
3UTR CAA 72 bp GCAGGCCAAGAAGACAATGTGTTTCTGAATATCACTTaGTTAATCGGGAGCTCCTACAAAAGTTCCGACATC +
Preference number: 4 (lower is better)
Translates to: AGQEDNVFLNIT*LIGSSYKSSDI
Trigger: GATGTCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTGTCTTCTTGGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTATTTGGTCTGTAGACTaGAACCTTCTCACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFIWSVD*NLLTVD
Trigger: GTCAACTGTGAGAAGGTTTCAGTCTACAGACCAAAT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCAGGGAGACTGCATGTaGAAAATTCAAGAATGTATT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFQGDCM*KIQECI
Trigger: AATACATTCTTGAATTTTTCACATGCAGTCTCCCTG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCAAGACACAATCTGACTaGGATTGCGGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSKTQSD*DCGWRG
Trigger: CCCTCTCCAACCGCAATCTCAGTCAGATTGTGTCTT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAAAGTCAGTGAAGTCTaGTACGTCCACATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFKVSEV*YVHILD
Trigger: ATCAAGGATGTGGACGTATCAGACTTCACTGACTTT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCAATTTGATTGCCATTaGGATATAGCCTGCGTAAAT +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSQFDCH*DIACVN
Trigger: ATTTACGCAGGCTATATCTCAATGGCAATCAAATTG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCAATTTGATTGCCATTaGGATATAGCCTGCGTAAAT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFQFDCH*DIACVN
Trigger: ATTTACGCAGGCTATATCTCAATGGCAATCAAATTG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCAAACACCGTTAAAATaGGGACCACTAAGATACTTA +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFQTPLK*GPLRYL
Trigger: TAAGTATCTTAGTGGTCCTCATTTTAACGGTGTTTG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTCTGTCCTGGAGGATCTaGAAACATGAACCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCLSWRI*KHEPSF
Trigger: GAAACTGGGTTCATGTTTTCAGATCCTCCAGGACAG...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGGATCTCAAAGCCACTaGCACCTATGCTATTATACT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFGSQSH*HLCYYT
Trigger: AGTATAATAGCATAGGTGTCAGTGGCTTTGAGATCC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAAGCTCATAGAATCCTaGAAAGCAAGACAACCGATG +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFKLIES*KARQPM
Trigger: CATCGGTTGTCTTGCTTTTCAGGATTCTATGAGCTT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTGTAGTTGCAGACTGTaGACTCATCTGAAACCAATG +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYCSCRL*THLKPM
Trigger: CATTGGTTTCAGATGAGTTCACAGTCTGCAACTACA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTATTATCCCCAGACCATaGATGGAACTTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFIIPRP*MELSDS
Trigger: GGAATCAGAAAGTTCCATTCATGGTCTGGGGATAAT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAGGTACTCTTGCCATTaGGAATTCTGCAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYRYSCH*EFCRNL
Trigger: AAGGTTTCTGCAGAATTCTCAATGGCAAGAGTACCT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAGCTACAGCAAGCTTTTaGGATGGTGGCAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALATASF*DGGRYS
Trigger: AGAGTACCTGCCACCATCTCAAAAGCTTGCTGTAGC...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCTAAAAATGCTGTACTaGTGTACATATCATACCTCC +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSLKMLY*CTYHTS
Trigger: GGAGGTATGATATGTACATCAGTACAGCATTTTTAG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGGAATACAGAGGTACTaGAGGGTTTCTAAAAGTATT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFGIQRY*RVSKSI
Trigger: AATACTTTTAGAAACCCTTCAGTACCTCTGTATTCC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTACTGAAGTGGAGGGTTaGGTAATTCTCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCTEVEG*VILSWF
Trigger: GAACCAGGAGAGAATTACTCAACCCTCCACTTCAGT...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTACAGAAACATCTTCTTaGAATCAGCAAACAACTGTA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGTETSS*NQQTTV
Trigger: TACAGTTGTTTGCTGATTGCAAGAAGATGTTTCTGT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCGATATGTCAGAATCTaGATTTGTCGAAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFRYVRI*ICRRNQ
Trigger: CTGATTTCTTCGACAAATGCAGATTCTGACATATCG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCGCAGGAACACACATTaGAAATTTCCACCGATATGT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFRRNTH*KFPPIC
Trigger: ACATATCGGTGGAAATTTGCAATGTGTGTTCCTGCG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTTATTATTCCCCAGATaGAGGGAGACTGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYLLFPR*RETACE
Trigger: TTCACATGCAGTCTCCCTGCATCTGGGGAATAATAA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTTTGTTCAAGTGCAACTaGTTTAATGCACTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFLFKCN*FNALSP
Trigger: TGGGCTCAGTGCATTAAAGCAGTTGCACTTGAACAA...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTCATTGTTGTTCAAGTaGAACTGCTTTAATGCACTG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSSLLFK*NCFNAL
Trigger: CAGTGCATTAAAGCAGTTGCACTTGAACAACAATGA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCAGATGGGTCAAAGATaGGAATCGGAAAATATTATC +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSQMGQR*ESENII
Trigger: GATAATATTTTCCGATTCGCATCTTTGACCCATCTG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACAAAATCACTGCCGGTaGCCATGGGACATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALQNHCR*PWDIAL
Trigger: AAGAGCTATGTCCCATGGGCACCGGCAGTGATTTTG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTTTAAGTACAGTAACTaGAAATTTGGCATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTFKYSN*KFGMES
Trigger: TGACTCCATGCCAAATTTGCAGTTACTGTACTTAAA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTAAGTACAGTAACTaGAAATTTGGCATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGFKYSN*KFGMES
Trigger: TGACTCCATGCCAAATTTGCAGTTACTGTACTTAAA...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTTTGGTTTTGTGGTCATaGTTCCTTAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCLVLWS*FLSCSC
Trigger: GCAGCTGCAGCTAAGGAAGCATGACCACAAAACCAA...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAAAAATAGCTTTGGGTaGGCTCACACAGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFKNSFG*AHTVST
Trigger: AGTGCTTACTGTGTGAGCGCACCCAAAGCTATTTTT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAAAAATAGCTTTGGGTaGGCTCACACAGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYKNSFG*AHTVST
Trigger: AGTGCTTACTGTGTGAGCGCACCCAAAGCTATTTTT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACTCTGCGGAAAGTGGCTaGGAGTGGGGTGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYSAESG*EWGAKI
Trigger: TATTTTTGCACCCCACTCGCAGCCACTTTCCGCAGA...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCGATTCCAGAGATCTTaGAAGGATTTGTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSRFQRS*KDLLFL
Trigger: CAAAAACAACAAATCCTTCCAAGATCTCTGGAATCG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCGATTCCAGAGATCTTaGAAGGATTTGTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFRFQRS*KDLLFL
Trigger: CAAAAACAACAAATCCTTCCAAGATCTCTGGAATCG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTGTATATTTTTCTCTTaGCAGTTCACACTTAGTCCC +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSCIFFS*QFTLSP
Trigger: GGGACTAAGTGTGAACTGCCAAGAGAAAAATATACA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTACTGCAAATTTGGCATaGAGTCAAAGGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCTANLA*SQRCLL
Trigger: CAGCAGGCACCTTTGACTCCATGCCAAATTTGCAGT...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTTTTATTGGTTTTGTaGTCATGCTTCCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSFLLVL*SCFLSC
Trigger: GCAGCTAAGGAAGCATGACCACAAAACCAATAAAAA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCTGTTCTATAGTTTGTaGAATGAAAGCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFLFYSL*NESFCA
Trigger: AGCACAGAAGCTTTCATTCCACAAACTATAGAACAG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAGAGCACATTCTCAACTaGCACGCAGGAACACACATT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALEHILN*HAGTHI
Trigger: AATGTGTGTTCCTGCGTGTCAGTTGAGAATGTGCTC...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGTCAAAGGTGCCTGCTaGGATTTCCTTAATCAAATT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFVKGAC*DFLNQI
Trigger: AATTTGATTAAGGAAATCTCAGCAGGCACCTTTGAC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACGTCAAAGGTGCCTGCTaGGATTTCCTTAATCAAATT +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYVKGAC*DFLNQI
Trigger: AATTTGATTAAGGAAATCTCAGCAGGCACCTTTGAC...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATCAATGTTGGCAAACTaGACAGGCGTCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRSMLAN*TGVSHF
Trigger: GAAATGTGAGACGCCTGTTCAGTTTGCCAACATTGA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGACTGTGAACTCATCTaGAACCAATGCAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFDCELI*NQCKHF
Trigger: AAAATGCTTGCATTGGTTTCAGATGAGTTCACAGTC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATGCCACTTGCAATCATaGGGAATGGCTATGTTTACC +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRCHLQS*GMAMFT
Trigger: GGTAAACATAGCCATTCCTCATGATTGCAAGTGGCA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTATGTCAGAATCCAACTaGTTCAAAAGAATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFMSESN*FKRMGK
Trigger: CTTGCCCATTCTTTTGAATCAGTTGGATTCTGACAT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAATGATGCCAAACCTTaGTTTGATGCCACTTGTCTA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYNDAKP*FDATCL
Trigger: TAGACAAGTGGCATCAAATCAAGGTTTGGCATCATT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTACAGAAACATCTTCTTaGAATCAGCAAACAACTGTA +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSTETSS*NQQTTV
Trigger: TACAGTTGTTTGCTGATTGCAAGAAGATGTTTCTGT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTATTGCCATTGACGTaGAGCTTCTTCGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFLLPLT*SFFAFK
Trigger: TTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGACTGTGGGTTTCTTGTTaGGTCGCAGGACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRLWVSC*VAGQKQ
Trigger: TTGTTTTTGTCCTGCGACGCAACAAGAAACCCACAG...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCAATTTTACTGTGGTTaGCACCTATCAGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFQFYCG*HLSVTS
Trigger: AGAAGTCACTGATAGGTGGCAACCACAGTAAAATTG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATTGTTCAAAGCTGTTTaGTCCTCAAGGACCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRLFKAV*SSRTCR
Trigger: CCTACAGGTCCTTGAGGAGCAAACAGCTTTGAACAA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTATCTATATATATATATaGAGGCAGGCCAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFIYIYI*RQAKKT
Trigger: TGTCTTCTTGGCCTGCCTGCATATATATATATAGAT...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTATCTATATATATATATaGAGGCAGGCCAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSIYIYI*RQAKKT
Trigger: TGTCTTCTTGGCCTGCCTGCATATATATATATAGAT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCCCTCGTATATCCAGATaGGTCAAAGATGCGAATCGG +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAPRISR*VKDANR
Trigger: CCGATTCGCATCTTTGACCCATCTGGATATACGAGG...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACACAAGTACAGTCCCATaGGTTGCCCTCCAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYTSTVP*VALQVN
Trigger: ATTGACTTGGAGGGCAACCCATGGGACTGTACTTGT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAGATAAAGGACCCAGCTaGTACAGGTGTACCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRDKGPS*YRCTSF
Trigger: AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATC...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGCCTTTGGTGCAGAATaGGTTAAGCCGGATGATCTT +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYAFGAE*VKPDDL
Trigger: AAGATCATCCGGCTTAACCCATTCTGCACCAAAGGC...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAAGAGAAATAATCTTTaGCTAATTGTCACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYKRNNL*LIVTPQ
Trigger: CTGCGGGGTGACAATTAGCCAAAGATTATTTCTCTT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR CCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTAAGCAAGACAACCGATaGCAAATAACAACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCKQDNR*QITTAP
Trigger: TGGGGCAGTTGTTATTTGCCATCGGTTGTCTTGCTT...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAAAGCAAGACAACCGATaGCAAATAACAACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRKQDNR*QITTAP
Trigger: TGGGGCAGTTGTTATTTGCCATCGGTTGTCTTGCTT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTTCCCCAGACCATGAATaGAACTTTCTGATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCSPDHE*NFLIPP
Trigger: AGGAGGAATCAGAAAGTTCCATTCATGGTCTGGGGA...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACAGCAAGCTTTTGAGATaGTGGCAGGTACTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYSKLLR*WQVLLP
Trigger: TGGCAAGAGTACCTGCCACCATCTCAAAAGCTTGCT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCCATAACAGAAGTGGCTaGAACCCAAAGCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAHNRSG*NPKLCA
Trigger: AGCACAGAGCTTTGGGTTCCAGCCACTTCTGTTATG...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCAGGTTATGAAGACCTaGAAATATTTCAGGATAGAG +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYQVMKT*KYFRIE
Trigger: CTCTATCCTGAAATATTTTCAGGTCTTCATAACCTG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCAAACACCGTTAAAATaGGGACCACTAAGATACTTA +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFQTPLK*GPLRYL
Trigger: TAAGTATCTTAGTGGTCCTCATTTTAACGGTGTTTG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAAAGTATCATTCAAATaGCCTATTATCCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFKVSFK*PIIPRP
Trigger: TGGTCTGGGGATAATAGGTCATTTGAATGATACTTT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTCTACAAAAGTAAACTaGAGTGGAGGGTTGAGTAAT +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYSTKVN*SGGLSN
Trigger: ATTACTCAACCCTCCACTTCAGTTTACTTTTGTAGA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATTAACCAGCAGCGTCTaGCATGATCTAGTATTTGTG +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRLTSSV*HDLVFV
Trigger: CACAAATACTAGATCATGTCAGACGCTGCTGGTTAA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCGATATGTCAGAATCTaGATTTGTCGAAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYRYVRI*ICRRNQ
Trigger: CTGATTTCTTCGACAAATGCAGATTCTGACATATCG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATTATTATTCCCCAGATaGAGGGAGACTGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRLLFPR*RETACE
Trigger: TTCACATGCAGTCTCCCTGCATCTGGGGAATAATAA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATTGTTCAAGTGCAACTaGTTTAATGCACTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRLFKCN*FNALSP
Trigger: TGGGCTCAGTGCATTAAAGCAGTTGCACTTGAACAA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTATTTGGCAATAGAGTTTaGAGTATCCCCACAGGACTC +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALFGNRV*SIPTGL
Trigger: GAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAA...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGACCATGGATGTGTGCATaGATGGTAATGGCATATCAA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRPWMCA*MVMAYQ
Trigger: TTGATATGCCATTACCATGCATGCACACATCCATGG...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAAAATTAGACCAAGGTaGTTTCAGCTGATTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYKIRPR*FQLIWS
Trigger: AGACCAAATCAGCTGAAACCACCTTGGTCTAATTTT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTATGTAAATGTTATATaGCATGTTCTCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYYVNVI*HVLQPS
Trigger: GCTTGGCTGGAGAACATGCCATATAACATTTACATA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTTATGTAAATGTTATATaGCATGTTCTCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFYVNVI*HVLQPS
Trigger: GCTTGGCTGGAGAACATGCCATATAACATTTACATA...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCGATTCCAGAGATCTTaGAAGGATTTGTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFRFQRS*KDLLFL
Trigger: CAAAAACAACAAATCCTTCCAAGATCTCTGGAATCG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTACTTCAGTTCAATGTTaGCAAACTGAACAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCTSVQC*QTEQAS
Trigger: AGACGCCTGTTCAGTTTGCCAACATTGAACTGAAGT...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTATTCAAGCCACAAGTGTaGCTCTTGCTCATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALFKPQV*LLLICS
Trigger: AGAACAGATGAGCAAGAGCCACACTTGTGGCTTGAA...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTTCAAGCCACAAGTGTaGCTCTTGCTCATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSFKPQV*LLLICS
Trigger: AGAACAGATGAGCAAGAGCCACACTTGTGGCTTGAA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCGATAAAGGACCCAGCTaGTACAGGTGTACCAGTTTT +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSDKGPS*YRCTSF
Trigger: AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATC...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCAAGCTTTTGAGATGGTaGCAGGTACTCTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSKLLRW*QVLLPL
Trigger: CAATGGCAAGAGTACCTGCCACCATCTCAAAAGCTT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCCAGGCAAACTGGCAATaGAATACAGAGGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAQANWQ*NTEVLK
Trigger: CTTCAGTACCTCTGTATTCCATTGCCAGTTTGCCTG...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAAAAGTCAGTGAAGTCTaGTACGTCCACATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALKVSEV*YVHILD
Trigger: ATCAAGGATGTGGACGTATCAGACTTCACTGACTTT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTGTCAAAGGTGCCTGCTaGGATTTCCTTAATCAAATT +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCVKGAC*DFLNQI
Trigger: AATTTGATTAAGGAAATCTCAGCAGGCACCTTTGAC...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAGGATCTCAAAGCCACTaGCACCTATGCTATTATACT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALGSQSH*HLCYYT
Trigger: AGTATAATAGCATAGGTGTCAGTGGCTTTGAGATCC...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACAAGCTCATAGAATCCTaGAAAGCAAGACAACCGATG +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYKLIES*KARQPM
Trigger: CATCGGTTGTCTTGCTTTTCAGGATTCTATGAGCTT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACATTATCCCCAGACCATaGATGGAACTTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYIIPRP*MELSDS
Trigger: GGAATCAGAAAGTTCCATTCATGGTCTGGGGATAAT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAAGAATCAAAGCATGTTaGTCTTGGCACTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALRIKAC*SWHCQT
Trigger: AGTCTGACAGTGCCAAGATCAACATGCTTTGATTCT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAAATGATGCCAAACCTTaGTTTGATGCCACTTGTCTA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRNDAKP*FDATCL
Trigger: TAGACAAGTGGCATCAAATCAAGGTTTGGCATCATT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACACAGAAACATCTTCTTaGAATCAGCAAACAACTGTA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYTETSS*NQQTTV
Trigger: TACAGTTGTTTGCTGATTGCAAGAAGATGTTTCTGT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACCGCAGGAACACACATTaGAAATTTCCACCGATATGT +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYRRNTH*KFPPIC
Trigger: ACATATCGGTGGAAATTTGCAATGTGTGTTCCTGCG...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACCTCCCTCAATGTTCTaGAGTTTATTATTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALPPSMF*SLLFPR
Trigger: TCTGGGGAATAATAAACTGCAGAACATTGAGGGAGG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTTGTTCAAGTGCAACTaGTTTAATGCACTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSLFKCN*FNALSP
Trigger: TGGGCTCAGTGCATTAAAGCAGTTGCACTTGAACAA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGACAATTTTACTGTGGTTaGCACCTATCAGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRQFYCG*HLSVTS
Trigger: AGAAGTCACTGATAGGTGGCAACCACAGTAAAATTG...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACGGTACAAAACAGATTTaGCTCTTGAGGTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYGTKQI*LLRLNS
Trigger: TGAATTTAACCTCAAGAGGCAAATCTGTTTTGTACC...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTATGGCAAATAACAACTaGCCCAGACACAATACTAGA +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCMANNN*PRHNTR
Trigger: TCTAGTATTGTGTCTGGGGCAGTTGTTATTTGCCAT...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACCATGGATGTGTGCATaGATGGTAATGGCATATCAA +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALPWMCA*MVMAYQ
Trigger: TTGATATGCCATTACCATGCATGCACACATCCATGG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCACTTCAGTTCAATGTTaGCAAACTGAACAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSATSVQC*QTEQAS
Trigger: AGACGCCTGTTCAGTTTGCCAACATTGAACTGAAGT...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAACGAAGGTTTTGCATTaGGGTACAAAACAGATTTGC +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRTKVLH*GTKQIC
Trigger: GCAAATCTGTTTTGTACCCCAATGCAAAACCTTCGT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACAACCTTGAAGGATTGTaGGTGTTTCACGTAACTGAG +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYNLEGL*VFHVTE
Trigger: CTCAGTTACGTGAAACACCCACAATCCTTCAAGGTT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAAACCTTGAAGGATTGTaGGTGTTTCACGTAACTGAG +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALNLEGL*VFHVTE
Trigger: CTCAGTTACGTGAAACACCCACAATCCTTCAAGGTT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCTGTAACCAGGCAAACTaGCAATGGAATACAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSACNQAN*QWNTEV
Trigger: TACCTCTGTATTCCATTGCCAGTTTGCCTGGTTACA...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTCAATTTGATTGCCATTaGGATATAGCCTGCGTAAAT +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCQFDCH*DIACVN
Trigger: ATTTACGCAGGCTATATCTCAATGGCAATCAAATTG...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCGTGTACCAGTTTTCTTaGGTTTGCTTTACAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAVYQFS*VCFTKH
Trigger: GTGCTTTGTAAAGCAAACTCAAGAAAACTGGTACAC...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCGGTGTTTCACGTAACTaGGAACAAACTCTAGTGTTA +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAGVSRN*EQTLVL
Trigger: TAACACTAGAGTTTGTTCTCAGTTACGTGAAACACC...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGGTGTTTCACGTAACTaGGAACAAACTCTAGTGTTA +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYGVSRN*EQTLVL
Trigger: TAACACTAGAGTTTGTTCTCAGTTACGTGAAACACC...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTCTAAAAATGCTGTACTaGTGTACATATCATACCTCC +
Preference number: 4 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCLKMLY*CTYHTS
Trigger: GGAGGTATGATATGTACATCAGTACAGCATTTTTAG...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCCAAATCTGGGTGAAATaGTCAGTTTGGTTACTGCTT +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSQIWVK*SVWLLL
Trigger: AAGCAGTAACCAAACTGATCATTTCACCCAGATTTG...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAATGTCAGAATCCAACTaGTTCAAAAGAATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALMSESN*FKRMGK
Trigger: CTTGCCCATTCTTTTGAATCAGTTGGATTCTGACAT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATCATTGTTGTTCAAGTaGAACTGCTTTAATGCACTG +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRSLLFK*NCFNAL
Trigger: CAGTGCATTAAAGCAGTTGCACTTGAACAACAATGA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACCTATTGCCATTGACGTaGAGCTTCTTCGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYLLPLT*SFFAFK
Trigger: TTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAG...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACAATTTTACTGTGGTTaGCACCTATCAGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALQFYCG*HLSVTS
Trigger: AGAAGTCACTGATAGGTGGCAACCACAGTAAAATTG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAGAACCCAAAGCTCTGTaGTCAGTACTCATAAATAAA +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFREPKAL*SVLINK
Trigger: TTTATTTATGAGTACTGAGCACAGAGCTTTGGGTTC...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACACGAAGGTTTTGCATTaGGGTACAAAACAGATTTGC +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYTKVLH*GTKQIC
Trigger: GCAAATCTGTTTTGTACCCCAATGCAAAACCTTCGT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACAGGGAGACTGCATGTaGAAAATTCAAGAATGTATT +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALQGDCM*KIQECI
Trigger: AATACATTCTTGAATTTTTCACATGCAGTCTCCCTG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACCAGGTTATGAAGACCTaGAAATATTTCAGGATAGAG +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYQVMKT*KYFRIE
Trigger: CTCTATCCTGAAATATTTTCAGGTCTTCATAACCTG...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTCTACAAAAGTAAACTaGAGTGGAGGGTTGAGTAAT +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSSTKVN*SGGLSN
Trigger: ATTACTCAACCCTCCACTTCAGTTTACTTTTGTAGA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCGAACAAAGCTTACTATaGTTTTCACACACTTCCATG +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAEQSLL*FSHTSM
Trigger: CATGGAAGTGTGTGAAAATCATAGTAAGCTTTGTTC...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR TCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCGAACAAAGCTTACTATaGTTTTCACACACTTCCATG +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSEQSLL*FSHTSM
Trigger: CATGGAAGTGTGTGAAAATCATAGTAAGCTTTGTTC...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCTCATTGTTGTTCAAGTaGAACTGCTTTAATGCACTG +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSASLLFK*NCFNAL
Trigger: CAGTGCATTAAAGCAGTTGCACTTGAACAACAATGA...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCCAGATGGGTCAAAGATaGGAATCGGAAAATATTATC +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAQMGQR*ESENII
Trigger: GATAATATTTTCCGATTCGCATCTTTGACCCATCTG...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATCAGATCATCACAAATaGTATCTAACTCACGTTGAT +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRSDHHK*YLTHVD
Trigger: ATCAACGTGAGTTAGATAGCATTTGTGATGATCTGA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAAGTTACATTCATTTCTaGCCTCAAGTTAACCGTAAT +
Preference number: 4 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRSYIHF*PQVNRN
Trigger: ATTACGGTTAACTTGAGGGCAGAAATGAATGTAACT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACAAAATTAGACCAAGGTaGTTTCAGCTGATTTGGTCT +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYKIRPR*FQLIWS
Trigger: AGACCAAATCAGCTGAAACCACCTTGGTCTAATTTT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTATGTAAATGTTATATaGCATGTTCTCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSYVNVI*HVLQPS
Trigger: GCTTGGCTGGAGAACATGCCATATAACATTTACATA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTGTATATTTTTCTCTTaGCAGTTCACACTTAGTCCC +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSCIFFS*QFTLSP
Trigger: GGGACTAAGTGTGAACTGCCAAGAGAAAAATATACA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACTGTATATTTTTCTCTTaGCAGTTCACACTTAGTCCC +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYCIFFS*QFTLSP
Trigger: GGGACTAAGTGTGAACTGCCAAGAGAAAAATATACA...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCTTTTTATTGGTTTTGTaGTCATGCTTCCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAFLLVL*SCFLSC
Trigger: GCAGCTAAGGAAGCATGACCACAAAACCAATAAAAA...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTATTTTTATTGGTTTTGTaGTCATGCTTCCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SYILPSNLGEMISLVTALFLLVL*SCFLSC
Trigger: GCAGCTAAGGAAGCATGACCACAAAACCAATAAAAA...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCCTGTTCTATAGTTTGTaGAATGAAAGCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSALFYSL*NESFCA
Trigger: AGCACAGAAGCTTTCATTCCACAAACTATAGAACAG...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACTTTAAGTACAGTAACTaGAAATTTGGCATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: STCICYLYCSHLQHTYVYFKYSN*KFGMES
Trigger: TGACTCCATGCCAAATTTGCAGTTACTGTACTTAAA...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR GCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCAGTTACATTCATTTCTaGCCTCAAGTTAACCGTAAT +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSSYIHF*PQVNRN
Trigger: ATTACGGTTAACTTGAGGGCAGAAATGAATGTAACT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CCA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTGCTCAGTCTCTTCCTaGTATCTACATGTAATAAAT +
Preference number: 4 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSCSVSS*YLHVIN
Trigger: ATTTATTACATGTAGATACCAGGAAGAGACTGAGCA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS TCA 90 bp CGCGGCGCCGTGACCTGCGCTGCTGTTTCCACGATGGTATCTATGTaGTTCCGGACAGAGCTCCTCCGCGCCCGCTCGCCCGTCAAACCC +
Preference number: 5 (lower is better)
Translates to: RGAVTCAAVSTMVSM*FRTELLRARSPVKP
Trigger: GGGTTTGACGGGCGAGCGGGCGCGGAGGAGCTCTGTCCGGAATCACATAGATACCATCGTGGAAACAGCAGCGCAGGTCACGGCGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS GCA 90 bp CCCGAGCCTCAGATCCACGTCTGCGGAAAGTGGCTGCGAGTGGGGTaGAAAAATAAAGCCCAACCCAGCCCAGCGGCCCGACAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: PEPQIHVCGKWLRVG*KNKAQPSPAARQPE
Trigger: CTCCGGCTGTCGGGCCGCTGGGCTGGGTTGGGCTTTATTTTTGCACCCCACTCGCAGCCACTTTCCGCAGACGTGGATCTGAGGCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS CCA 90 bp ACTGCCCCGAGCCTCAGATCCACGTCTGCGGAAAGTGGCTGCGAGTaGGGTGCAAAAATAAAGCCCAACCCAGCCCAGCGGCCCGACAGC +
Preference number: 5 (lower is better)
Translates to: TAPSLRSTSAESGCE*GAKIKPNPAQRPDS
Trigger: GCTGTCGGGCCGCTGGGCTGGGTTGGGCTTTATTTTTGCACCCCACTCGCAGCCACTTTCCGCAGACGTGGATCTGAGGCTCGGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS CCA 90 bp GGTAGTGTGACCATTGGGAGTGGTGTAGCCATTTTCCAGCTGAGATaGAGGCAGGATGCGCACGTCAAAATCACTGCCGGTGCCCATGGG +
Preference number: 5 (lower is better)
Translates to: GSVTIGSGVAIFQLR*RQDAHVKITAGAHG
Trigger: CCCATGGGCACCGGCAGTGATTTTGACGTGCGCATCCTGCCTCCATCTCAGCTGGAAAATGGCTACACCACTCCCAATGGTCACACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 90 bp AGCTGCAGCTGCATGGAGCCACAGTCAGGATTCCCCAGGCCTTCGTaGTTCACTGTGGGTTTCTTGTTGCGTCGCAGGACAAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: SCSCMEPQSGFPRPS*FTVGFLLRRRTKTR
Trigger: TCTTGTTTTTGTCCTGCGACGCAACAAGAAACCCACAGTGAAGCACGAAGGCCTGGGGAATCCTGACTGTGGCTCCATGCAGCTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 90 bp TCTCTTGGCAGTTCACACTTAGTCCCAAATCTGAAGGGTGTGTTTTaGAGAAGCAAGGTGCCGGGCAAGGTGTTAGAGGAGGCACCCTTG +
Preference number: 5 (lower is better)
Translates to: SLGSSHLVPNLKGVF*RSKVPGKVLEEAPL
Trigger: CAAGGGTGCCTCCTCTAACACCTTGCCCGGCACCTTGCTTCTGCAAAACACACCCTTCAGATTTGGGACTAAGTGTGAACTGCCAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CCA 90 bp CGGGTTAGAAGGAGACGGGTTAATTATCCGCACCTTAGAACTCCGTaGGCCTTTGGTGCAGAATGGGTTAAGCCGGATGATCTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: RVRRRRVNYPHLRTP*AFGAEWVKPDDLGA
Trigger: AGCTCCAAGATCATCCGGCTTAACCCATTCTGCACCAAAGGCCCACGGAGTTCTAAGGTGCGGATAATTAACCCGTCTCCTTCTAACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCGGTTGGAGAGGGCTTaGCCTGCAACGATTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGRLERA*PATIPE
Trigger: CTCTGGAATCGTTGCAGGCAAAGCCCTCTCCAACCG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTAAGCCGGATGATCTaGGAGCTGGGGGTGGGGATA +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGLSRMI*ELGVGI
Trigger: TATCCCCACCCCCAGCTCCAAGATCATCCGGCTTAA...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS TCA 90 bp AAGGTGTTAGAGGAGGCACCCTTGTTTGGTAAGACACAATCTGACTaGGATTGCGGTTGGAGAGGGCTTTGCCTGCAACGATTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: KVLEEAPLFGKTQSD*DCGWRGLCLQRFQR
Trigger: TCTCTGGAATCGTTGCAGGCAAAGCCCTCTCCAACCGCAATCTCAGTCAGATTGTGTCTTACCAAACAAGGGTGCCTCCTCTAACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTCTGAAGGGTGTGTTTaGCAGAAGCAAGGTGCCGGG +
Preference number: 5 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSSEGCV*QKQGAG
Trigger: CCCGGCACCTTGCTTCTGCAAAACACACCCTTCAGA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTGTACAGTCCCATGGGTaGCCCTCCAAGTCAATCTGT +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGVQSHG*PSKSIC
Trigger: ACAGATTGACTTGGAGGGCAACCCATGGGACTGTAC...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS TCA 90 bp TCCCATGGGTTGCCCTCCAAGTCAATCTGTGTAAGAGATTGCAACTaGTCAAGGACCCCGCTGACAGGCAGGTACATGAATTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SHGLPSKSICVRDCN*SRTPLTGRYMNLLF
Trigger: GAACAACAAATTCATGTACCTGCCTGTCAGCGGGGTCCTTGATCAGTTGCAATCTCTTACACAGATTGACTTGGAGGGCAACCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGTACAGTCCCATGGGTaGCCCTCCAAGTCAATCTGT +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFVQSHG*PSKSIC
Trigger: ACAGATTGACTTGGAGGGCAACCCATGGGACTGTAC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGTTAATGAGACACCCTaGGAAACACCTGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTVNETP*ETPASM
Trigger: CATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAAC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTGCTACAGCAAGCTTTaGAGATGGTGGCAGGTACTC +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGCYSKL*RWWQVL
Trigger: GAGTACCTGCCACCATCTCAAAAGCTTGCTGTAGCA...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTAGGGTTATCTTCCAGTaGCAATTCAACGACACGGCC +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFRVIFQ*QFNDTA
Trigger: GGCCGTGTCGTTGAATTGCAACTGGAAGATAACCCT...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGGAGGCACCCTTGTTaGGTAAGACACAATCTGACT +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTRRHPC*VRHNLT
Trigger: AGTCAGATTGTGTCTTACCAAACAAGGGTGCCTCCT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTCTGAAGGGTGTGTTTaGCAGAAGCAAGGTGCCGGG +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYSEGCV*QKQGAG
Trigger: CCCGGCACCTTGCTTCTGCAAAACACACCCTTCAGA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTACATCCTTGATGCTATaGCCATTGACGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGTSLML*PLTCSF
Trigger: GAAGCTGCACGTCAATGGCAATAGCATCAAGGATGT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCACTGTGGGTTTCTTGTaGCGTCGCAGGACAAAAACA +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTTVGFL*RRRTKT
Trigger: TGTTTTTGTCCTGCGACGCAACAAGAAACCCACAGT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTTCACTGTGGGTTTCTaGTTGCGTCGCAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTFTVGF*LRRRTK
Trigger: TTTTGTCCTGCGACGCAACAAGAAACCCACAGTGAA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCATCCAGCTCATCAATaGTGCTCAGTCTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFHPAHQ*CSVSSW
Trigger: CCAGGAAGAGACTGAGCACAATTGATGAGCTGGATG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCATCCAGCTCATCAATaGTGCTCAGTCTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSHPAHQ*CSVSSW
Trigger: CCAGGAAGAGACTGAGCACAATTGATGAGCTGGATG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 90 bp GTAAGACACAATCTGACTGAGATTGCGGTTGGAGAGGGCTTTGCCTaGAACGATTCCAGAGATCTTGGAAGGATTTGTTGTTTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: VRHNLTEIAVGEGFA*NDSRDLGRICCFWW
Trigger: CCACCAAAAACAACAAATCCTTCCAAGATCTCTGGAATCGTTGCAGGCAAAGCCCTCTCCAACCGCAATCTCAGTCAGATTGTGTCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTGTCAGAATCTGCATTaGTCGAAGAAATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTCQNLH*SKKSGL
Trigger: CAGCCCTGATTTCTTCGACAAATGCAGATTCTGACA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTAGGAGGCACCCTTGTTaGGTAAGACACAATCTGACT +
Preference number: 5 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSRRHPC*VRHNLT
Trigger: AGTCAGATTGTGTCTTACCAAACAAGGGTGCCTCCT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTAGAGGAGGCACCCTaGTTTGGTAAGACACAATCT +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGLEEAP*FGKTQS
Trigger: AGATTGTGTCTTACCAAACAAGGGTGCCTCCTCTAA...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTGATACGTCCACATCCTaGATGCTATTGCCATTGACG +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFDTSTS*MLLPLT
Trigger: CGTCAATGGCAATAGCATCAAGGATGTGGACGTATC...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTAATCTGTGTAAGAGATaGCAACTGATCAAGGACCCC +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGNLCKR*QLIKDP
Trigger: GGGGTCCTTGATCAGTTGCAATCTCTTACACAGATT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCGACAACCTTGAAGGATaGTGGGTGTTTCACGTAACT +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTDNLEG*WVFHVT
Trigger: AGTTACGTGAAACACCCACAATCCTTCAAGGTTGTC...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCCAAAGCATGTTGATCTaGGCACTGTCAGACTCTTCT +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTQSMLI*ALSDSS
Trigger: AGAAGAGTCTGACAGTGCCAAGATCAACATGCTTTG...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCTGGTATTCCTAGTCTaGCCGAGCGCTAGCAATCTC +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYLVFLV*PSASNL
Trigger: GAGATTGCTAGCGCTCGGCAAGACTAGGAATACCAG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS TCA 90 bp GTGGTTTCAGCTGATTTGGTCTGTAGACTGAAACCTTCTCACAGTTaGCATAGAGCACATTCTCAACTGACACGCAGGAACACACATTGC +
Preference number: 5 (lower is better)
Translates to: VVSADLVCRLKPSHS*HRAHSQLTRRNTHC
Trigger: GCAATGTGTGTTCCTGCGTGTCAGTTGAGAATGTGCTCTATGTCAACTGTGAGAAGGTTTCAGTCTACAGACCAAATCAGCTGAAACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 90 bp TGCTTTAATGCACTGAGCCCAAGAAAGGCTCCTCCCTCAATGTTCTaGAGTTTATTATTCCCCAGATGCAGGGAGACTGCATGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: CFNALSPRKAPPSMF*SLLFPRCRETACEK
Trigger: TTTTTCACATGCAGTCTCCCTGCATCTGGGGAATAATAAACTGCAGAACATTGAGGGAGGAGCCTTTCTTGGGCTCAGTGCATTAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTACGCAGGAACACACATaGCAAATTTCCACCGATATG +
Preference number: 5 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSTQEHT*QISTDM
Trigger: CATATCGGTGGAAATTTGCAATGTGTGTTCCTGCGT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACCGGTTGGAGAGGGCTTaGCCTGCAACGATTCCAGAG +
Preference number: 5 (lower is better)
Translates to: STCICYLYCSHLQHTYVYRLERA*PATIPE
Trigger: CTCTGGAATCGTTGCAGGCAAAGCCCTCTCCAACCG...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTAGAGGAGGCACCCTaGTTTGGTAAGACACAATCT +
Preference number: 5 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSLEEAP*FGKTQS
Trigger: AGATTGTGTCTTACCAAACAAGGGTGCCTCCTCTAA...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTTTAGAGGAGGCACCCTaGTTTGGTAAGACACAATCT +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFLEEAP*FGKTQS
Trigger: AGATTGTGTCTTACCAAACAAGGGTGCCTCCTCTAA...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTGGCAGGTACATGAATTaGTTGTTCCTCAGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSGRYMN*LFLRFS
Trigger: ACTGAACCTGAGGAACAACAAATTCATGTACCTGCC...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTCCACAAGTGTGGCTCTaGCTCATCTGTTCTATAGTT +
Preference number: 5 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSPQVWL*LICSIV
Trigger: AACTATAGAACAGATGAGCAAGAGCCACACTTGTGG...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCATCCAGCTCATCAATaGTGCTCAGTCTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYHPAHQ*CSVSSW
Trigger: CCAGGAAGAGACTGAGCACAATTGATGAGCTGGATG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGTTAATGAGACACCCTaGGAAACACCTGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFVNETP*ETPASM
Trigger: CATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAAC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTTGCTACAGCAAGCTTTaGAGATGGTGGCAGGTACTC +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFCYSKL*RWWQVL
Trigger: GAGTACCTGCCACCATCTCAAAAGCTTGCTGTAGCA...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCAAAGCATGTTGATCTaGGCACTGTCAGACTCTTCT +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFQSMLI*ALSDSS
Trigger: AGAAGAGTCTGACAGTGCCAAGATCAACATGCTTTG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTCACAGAAACATCTTCTaGCAATCAGCAAACAACTGT +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGHRNIF*QSANNC
Trigger: ACAGTTGTTTGCTGATTGCAAGAAGATGTTTCTGTG...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAGGAGGCACCCTTGTTaGGTAAGACACAATCTGACT +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYRRHPC*VRHNLT
Trigger: AGTCAGATTGTGTCTTACCAAACAAGGGTGCCTCCT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTCTGAAGGGTGTGTTTaGCAGAAGCAAGGTGCCGGG +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSSEGCV*QKQGAG
Trigger: CCCGGCACCTTGCTTCTGCAAAACACACCCTTCAGA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACACTGTGGGTTTCTTGTaGCGTCGCAGGACAAAAACA +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYTVGFL*RRRTKT
Trigger: TGTTTTTGTCCTGCGACGCAACAAGAAACCCACAGT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTACAATTTTACTGTGGTaGCCACCTATCAGTGACTTC +
Preference number: 5 (lower is better)
Translates to: STCKIKDPAGTGVPVFLSTILLW*PPISDF
Trigger: GAAGTCACTGATAGGTGGCAACCACAGTAAAATTGT...ACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTAAAGAGACGAAGGTTTaGCATTGGGGTACAAAACAG +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFKETKV*HWGTKQ
Trigger: CTGTTTTGTACCCCAATGCAAAACCTTCGTCTCTTT...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCTTTCTGAATATCACTTaGTTAATCGGGAGCTCCTAC +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTFLNIT*LIGSSY
Trigger: GTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAA...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTATGCCAAACCTTGATTaGATGCCACTTGTCTACATA +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGMPNLD*MPLVYI
Trigger: TATGTAGACAAGTGGCATCAAATCAAGGTTTGGCAT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS GCA 90 bp GTGAAGTCTGATACGTCCACATCCTTGATGCTATTGCCATTGACGTaGAGCTTCTTCGCATTTAAAGGTTTCGGTATCAGTTCAGACATA +
Preference number: 5 (lower is better)
Translates to: VKSDTSTSLMLLPLT*SFFAFKGFGISSDI
Trigger: TATGTCTGAACTGATACCGAAACCTTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAAGGATGTGGACGTATCAGACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTCACAGAAACATCTTCTaGCAATCAGCAAACAACTGT +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFHRNIF*QSANNC
Trigger: ACAGTTGTTTGCTGATTGCAAGAAGATGTTTCTGTG...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTGTCAGAATCTGCATTaGTCGAAGAAATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYCQNLH*SKKSGL
Trigger: CAGCCCTGATTTCTTCGACAAATGCAGATTCTGACA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTACGCAGGAACACACATaGCAAATTTCCACCGATATG +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFTQEHT*QISTDM
Trigger: CATATCGGTGGAAATTTGCAATGTGTGTTCCTGCGT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTTTTATGAGAACTTTCAGTTaGTGGAGCTTATTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: PFGNRVCSIPTGLHSIGFMRTFS*WSLLKA
Trigger: AGCCTTCAATAAGCTCCACAAACTGAAAGTTCTCAT...AAAACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTAGGGTTATCTTCCAGTaGCAATTCAACGACACGGCC +
Preference number: 5 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCRVIFQ*QFNDTA
Trigger: GGCCGTGTCGTTGAATTGCAACTGGAAGATAACCCT...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTGGCAGGTACATGAATTaGTTGTTCCTCAGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFGRYMN*LFLRFS
Trigger: ACTGAACCTGAGGAACAACAAATTCATGTACCTGCC...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAATCTGTGTAAGAGATaGCAACTGATCAAGGACCCC +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFNLCKR*QLIKDP
Trigger: GGGGTCCTTGATCAGTTGCAATCTCTTACACAGATT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAGTACAGTCCCATGGGTaGCCCTCCAAGTCAATCTGT +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALVQSHG*PSKSIC
Trigger: ACAGATTGACTTGGAGGGCAACCCATGGGACTGTAC...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CATCCCTTTGGCAATAGAGTTTGCAGTATCCCCACAGGACTCCACAGTATAGGTAATAAATCTTTCTCCTaGTCGGCCACATTTCTCATA +
Preference number: 5 (lower is better)
Translates to: HPFGNRVCSIPTGLHSIGNKSFS*SATFLI
Trigger: TATGAGAAATGTGGCCGACAAGGAGAAAGATTTATT...ACCTATACTGTGGAGTCCTGTGGGGATACTGCAAACTCTATTGCCAAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAATAAATCTTTCTCCTaGTCGGCCACATTTCTCATA +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTNKSFS*SATFLI
Trigger: TATGAGAAATGTGGCCGACAAGGAGAAAGATTTATT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCCACCAACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAATCTTTACACGGAGTaGTTACAATGCCACAAATCA +
Preference number: 5 (lower is better)
Translates to: STNLIYVQDKGPSWYRCTNLYTE*LQCHKS
Trigger: TGATTTGTGGCATTGTAACAACTCCGTGTAAAGATT...GGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTTGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTCTGGAAGGAGCCTTCTaGGGAACCAATTTCCTAGGA +
Preference number: 5 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCLEGAF*GTNFLG
Trigger: TCCTAGGAAATTGGTTCCCAAGAAGGCTCCTTCCAG...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCAGGTACTCTTGCCATaGAGAATTCTGCAGAAACCT +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFQVLLP*RILQKP
Trigger: AGGTTTCTGCAGAATTCTCAATGGCAAGAGTACCTG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCAGGGTTATCTTCCAGTaGCAATTCAACGACACGGCC +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSRVIFQ*QFNDTA
Trigger: GGCCGTGTCGTTGAATTGCAACTGGAAGATAACCCT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTTTCACTGTGGGTTTCTaGTTGCGTCGCAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCFTVGF*LRRRTK
Trigger: TTTTGTCCTGCGACGCAACAAGAAACCCACAGTGAA...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGATTCACTGTGGGTTTCTaGTTGCGTCGCAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRFTVGF*LRRRTK
Trigger: TTTTGTCCTGCGACGCAACAAGAAACCCACAGTGAA...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCGTTAATGAGACACCCTaGGAAACACCTGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAVNETP*ETPASM
Trigger: CATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAAC...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAGCACTCTGCTTATTTaGGACAACCTTGAAGGATTG +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYSTLLI*DNLEGL
Trigger: CAATCCTTCAAGGTTGTCCAAAATAAGCAGAGTGCT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS TCA 90 bp CATAAGATTTCATTTTTGAGGGACTTCAGTTCAATGTTGGCAAACTaGACAGGCGTCTCACATTTCAGTTCTTTCACAACAATCCCGTCG +
Preference number: 5 (lower is better)
Translates to: HKISFLRDFSSMLAN*TGVSHFSSFTTIPS
Trigger: CGACGGGATTGTTGTGAAAGAACTGAAATGTGAGACGCCTGTTCAGTTTGCCAACATTGAACTGAAGTCCCTCAAAAATGAAATCTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 90 bp AGAAAGGCTCCTCCCTCAATGTTCTGCAGTTTATTATTCCCCAGATaGAGGGAGACTGCATGTGAAAAATTCAAGAATGTATTTGGATAC +
Preference number: 5 (lower is better)
Translates to: RKAPPSMFCSLLFPR*RETACEKFKNVFGY
Trigger: GTATCCAAATACATTCTTGAATTTTTCACATGCAGTCTCCCTGCATCTGGGGAATAATAAACTGCAGAACATTGAGGGAGGAGCCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CCA 90 bp TCTGAAAACATGAACCCAGTTTCTGACTCTTTCAAGCCACAAGTGTaGCTCTTGCTCATCTGTTCTATAGTTTGTGGAATGAAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SENMNPVSDSFKPQV*LLLICSIVCGMKAS
Trigger: AGAAGCTTTCATTCCACAAACTATAGAACAGATGAGCAAGAGCCACACTTGTGGCTTGAAAGAGTCAGAAACTGGGTTCATGTTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAACGCAGGAACACACATaGCAAATTTCCACCGATATG +
Preference number: 5 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRTQEHT*QISTDM
Trigger: CATATCGGTGGAAATTTGCAATGTGTGTTCCTGCGT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTATGAGAACTTTCAGTTaGTGGAGCTTATTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFMRTFS*WSLLKA
Trigger: AGCCTTCAATAAGCTCCACAAACTGAAAGTTCTCAT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCTTGATGCTATTGCCATaGACGTGCAGCTTCTTCGCA +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSLMLLP*TCSFFA
Trigger: TGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAA...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCTTGATGCTATTGCCATaGACGTGCAGCTTCTTCGCA +
Preference number: 5 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSALMLLP*TCSFFA
Trigger: TGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAA...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTATTGATGCTATTGCCATaGACGTGCAGCTTCTTCGCA +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALLMLLP*TCSFFA
Trigger: TGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAA...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGATACGTCCACATCCTaGATGCTATTGCCATTGACG +
Preference number: 5 (lower is better)
Translates to: STCICYLYCSHLQHTYVYDTSTS*MLLPLT
Trigger: CGTCAATGGCAATAGCATCAAGGATGTGGACGTATC...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCGATACGTCCACATCCTaGATGCTATTGCCATTGACG +
Preference number: 5 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSADTSTS*MLLPLT
Trigger: CGTCAATGGCAATAGCATCAAGGATGTGGACGTATC...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTAGGTACATGAATTTGTaGTTCCTCAGGTTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFRYMNL*FLRFSL
Trigger: TAGACTGAACCTGAGGAACAACAAATTCATGTACCT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAAATCTGTGTAAGAGATaGCAACTGATCAAGGACCCC +
Preference number: 5 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRNLCKR*QLIKDP
Trigger: GGGGTCCTTGATCAGTTGCAATCTCTTACACAGATT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCACTGTGGGTTTCTTGTaGCGTCGCAGGACAAAAACA +
Preference number: 5 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSATVGFL*RRRTKT
Trigger: TGTTTTTGTCCTGCGACGCAACAAGAAACCCACAGT...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACCTACTTGACACATCTTaGCAGCTACAGTTAATGAGA +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYLLDTS*QLQLMR
Trigger: TCTCATTAACTGTAGCTGCAAAGATGTGTCAAGTAG...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACTTTCTGAATATCACTTaGTTAATCGGGAGCTCCTAC +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYFLNIT*LIGSSY
Trigger: GTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAA...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS CCA 90 bp AAAGGTTTCGGTATCAGTTCAGACATAGACTGTATATTTTTCTCTTaGCAGTTCACACTTAGTCCCAAATCTGAAGGGTGTGTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: KGFGISSDIDCIFFS*QFTLSPKSEGCVLQ
Trigger: CTGCAAAACACACCCTTCAGATTTGGGACTAAGTGTGAACTGCCAAGAGAAAAATATACAGTCTATGTCTGAACTGATACCGAAACCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCGTGGTTTCAGCTGATTaGGTCTGTAGACTGAAACCT +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSVVSAD*VCRLKP
Trigger: AGGTTTCAGTCTACAGACCAAATCAGCTGAAACCAC...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGGTTTCAGCTGATTaGGTCTGTAGACTGAAACCT +
Preference number: 5 (lower is better)
Translates to: STCICYLYCSHLQHTYVYVVSAD*VCRLKP
Trigger: AGGTTTCAGTCTACAGACCAAATCAGCTGAAACCAC...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTACGATTCCAGAGATCTaGGAAGGATTTGTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFTIPEI*EGFVVF
Trigger: AAAAACAACAAATCCTTCCAAGATCTCTGGAATCGT...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACACGATTCCAGAGATCTaGGAAGGATTTGTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYTIPEI*EGFVVF
Trigger: AAAAACAACAAATCCTTCCAAGATCTCTGGAATCGT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGGCAGGTACATGAATTaGTTGTTCCTCAGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: STCICYLYCSHLQHTYVYGRYMN*LFLRFS
Trigger: ACTGAACCTGAGGAACAACAAATTCATGTACCTGCC...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCATCTGTTCTATAGTTaGTGGAATGAAAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFHLFYS*WNESFC
Trigger: ACAGAAGCTTTCATTCCACAAACTATAGAACAGATG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCCCACAAGTGTGGCTCTaGCTCATCTGTTCTATAGTT +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSPQVWL*LICSIV
Trigger: AACTATAGAACAGATGAGCAAGAGCCACACTTGTGG...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCCCACAAGTGTGGCTCTaGCTCATCTGTTCTATAGTT +
Preference number: 5 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAPQVWL*LICSIV
Trigger: AACTATAGAACAGATGAGCAAGAGCCACACTTGTGG...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGAACAATTTTACTGTGGTaGCCACCTATCAGTGACTTC +
Preference number: 5 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRTILLW*PPISDF
Trigger: GAAGTCACTGATAGGTGGCAACCACAGTAAAATTGT...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTGAGTTTGCTTTACAATCTTTACACGGAGTaGTTACAATGCCACAAATCA +
Preference number: 5 (lower is better)
Translates to: KIKDPAGTGVPVFLSLLYNLYTE*LQCHKS
Trigger: TGATTTGTGGCATTGTAACAACTCCGTGTAAAGATT...GTAAAGCAAACTCAAGAAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACAGGTACTCTTGCCATaGAGAATTCTGCAGAAACCT +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALQVLLP*RILQKP
Trigger: AGGTTTCTGCAGAATTCTCAATGGCAAGAGTACCTG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACTTTCTCCCCAACTCTTaGGATGCGACAGTAACAACA +
Preference number: 5 (lower is better)
Translates to: STCICYLYCSHLQHTYVYFLPNS*DATVTT
Trigger: TGTTGTTACTGTCGCATCCAAAGAGTTGGGGAGAAA...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCTTTCTCCCCAACTCTTaGGATGCGACAGTAACAACA +
Preference number: 5 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAFLPNS*DATVTT
Trigger: TGTTGTTACTGTCGCATCCAAAGAGTTGGGGAGAAA...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AACTTAATCTACGTGCAAGATAAAGGACCCAGCTGGTACAGGTGTACCAGTTTTCTTAAACCCACTGTATaGGTCAATATAGTCAGTTAC +
Preference number: 5 (lower is better)
Translates to: NLIYVQDKGPSWYRCTSFLKPTV*VNIVSY
Trigger: GTAACTGACTATATTGACCAATACAGTGGGTTTAAG...AAAACTGGTACACCTGTACCAGCTGGGTCCTTTATCTTGCACGTAGATTAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CAATGTGTTTCTGAATATCACTTTGTTAATCGGGAGCTCCTACAAAAGTTCCGACACAGAAACATCTTCTaGCAATCAGCAAACAACTGT +
Preference number: 5 (lower is better)
Translates to: QCVSEYHFVNRELLQKFRHRNIF*QSANNC
Trigger: ACAGTTGTTTGCTGATTGCAAGAAGATGTTTCTGTG...TCGGAACTTTTGTAGGAGCTCCCGATTAACAAAGTGATATTCAGAAACACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCAGTTTGTGGAGCTTATaGAAGGCTCCTCGTTCAATA +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSSLWSL*KAPRSI
Trigger: TATTGAACGAGGAGCCTTCAATAAGCTCCACAAACT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAAGTTTGTGGAGCTTATaGAAGGCTCCTCGTTCAATA +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALSLWSL*KAPRSI
Trigger: TATTGAACGAGGAGCCTTCAATAAGCTCCACAAACT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACAGTTTGTGGAGCTTATaGAAGGCTCCTCGTTCAATA +
Preference number: 5 (lower is better)
Translates to: STCICYLYCSHLQHTYVYSLWSL*KAPRSI
Trigger: TATTGAACGAGGAGCCTTCAATAAGCTCCACAAACT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp CTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACGTGTAGGTACATGAATTTGTaGTTCCTCAGGTTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: LAYAIYTVHTFSIPMYTCRYMNL*FLRFSL
Trigger: TAGACTGAACCTGAGGAACAACAAATTCATGTACCT...ACACGTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCACAATTTTACTGTGGTaGCCACCTATCAGTGACTTC +
Preference number: 5 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSATILLW*PPISDF
Trigger: GAAGTCACTGATAGGTGGCAACCACAGTAAAATTGT...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAAAAGAGACGAAGGTTTaGCATTGGGGTACAAAACAG +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALKETKV*HWGTKQ
Trigger: CTGTTTTGTACCCCAATGCAAAACCTTCGTCTCTTT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCAAAGAGACGAAGGTTTaGCATTGGGGTACAAAACAG +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSKETKV*HWGTKQ
Trigger: CTGTTTTGTACCCCAATGCAAAACCTTCGTCTCTTT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACAGCACTCTGCTTATTTaGGACAACCTTGAAGGATTG +
Preference number: 5 (lower is better)
Translates to: STCICYLYCSHLQHTYVYSTLLI*DNLEGL
Trigger: CAATCCTTCAAGGTTGTCCAAAATAAGCAGAGTGCT...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCATGAGAACTTTCAGTTaGTGGAGCTTATTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSMRTFS*WSLLKA
Trigger: AGCCTTCAATAAGCTCCACAAACTGAAAGTTCTCAT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACTACTTGACACATCTTaGCAGCTACAGTTAATGAGA +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALLLDTS*QLQLMR
Trigger: TCTCATTAACTGTAGCTGCAAAGATGTGTCAAGTAG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCATGCCAAACCTTGATTaGATGCCACTTGTCTACATA +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSMPNLD*MPLVYI
Trigger: TATGTAGACAAGTGGCATCAAATCAAGGTTTGGCAT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS TCA 90 bp CAGATGGGTCAAAGATGCGAATCGGAAAATATTATCAGGAAGGAATaGAATCAGATTGTCATTAAGAATGAGAACTTTCAGTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: QMGQRCESENIIRKE*NQIVIKNENFQFVE
Trigger: CTCCACAAACTGAAAGTTCTCATTCTTAATGACAATCTGATTTCATTCCTTCCTGATAATATTTTCCGATTCGCATCTTTGACCCATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAACGATTCCAGAGATCTaGGAAGGATTTGTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALTIPEI*EGFVVF
Trigger: AAAAACAACAAATCCTTCCAAGATCTCTGGAATCGT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTACATCTGTTCTATAGTTaGTGGAATGAAAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALHLFYS*WNESFC
Trigger: ACAGAAGCTTTCATTCCACAAACTATAGAACAGATG...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp TCTAAATTTGTTTGCAATCATTCTAACGTAGTCCATACCCATGACTATAGTGCCCATCTGTTCTATAGTTaGTGGAATGAAAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SKFVCNHSNVVHTHDYSAHLFYS*WNESFC
Trigger: ACAGAAGCTTTCATTCCACAAACTATAGAACAGATG...GGCACTATAGTCATGGGTATGGACTACGTTAGAATGATTGCAAACAAATTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGCTATATCTTACCCTCAAATCTGGGTGAAATGATCAGTTTGGTTACTGCTTTAAATAAATCTTTCTCCTaGTCGGCCACATTTCTCATA +
Preference number: 5 (lower is better)
Translates to: SYILPSNLGEMISLVTALNKSFS*SATFLI
Trigger: TATGAGAAATGTGGCCGACAAGGAGAAAGATTTATT...TAAAGCAGTAACCAAACTGATCATTTCACCCAGATTTGAGGGTAAGATATAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp ATCTTTACACGGAGTTGTTACAATGCCACAAATCAAAAGGATTATTCCAGTTCCAATCTTTACACGGAGTaGTTACAATGCCACAAATCA +
Preference number: 5 (lower is better)
Translates to: IFTRSCYNATNQKDYSSSNLYTE*LQCHKS
Trigger: TGATTTGTGGCATTGTAACAACTCCGTGTAAAGATT...GGAACTGGAATAATCCTTTTGATTTGTGGCATTGTAACAACTCCGTGTAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS-3UTR CAA 90 bp AGTACTTGCATATGCTATCTATACTGTTCACACCTTCAGCATACCTATGTATACCTTAAACCCACTGTATaGGTCAATATAGTCAGTTAC +
Preference number: 5 (lower is better)
Translates to: STCICYLYCSHLQHTYVYLKPTV*VNIVSY
Trigger: GTAACTGACTATATTGACCAATACAGTGGGTTTAAG...GTATACATAGGTATGCTGAAGGTGTGAACAGTATAGATAGCATATGCAAGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356928.2
ENST00000596188.2
CDS GCA 72 bp CGAGCGCTAGCAATCTCCGACCAACCCGCGGGCCACTaGCCCGAGCCTCAGATCCACGTCTGCGGAAAGTGG +
Preference number: 6 (lower is better)
Translates to: RALAISDQPAGH*PEPQIHVCGKW
Trigger: CCACTTTCCGCAGACGTGGATCTGAGGCTCGGGGCAGTGGCCCGCGGGTTGGTCGGAGATTGCTAGCGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS GCA 72 bp CGTCTGGTGCAGGGCCCGCGGCGCCGTGACCTGCGCTaGTGTTTCCACGATGGTATCTATGTGATTCCGGAC +
Preference number: 6 (lower is better)
Translates to: RLVQGPRRRDLR*CFHDGIYVIPD
Trigger: GTCCGGAATCACATAGATACCATCGTGGAAACAGCAGCGCAGGTCACGGCGCCGCGGGCCCTGCACCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS TCA 72 bp GTGACCTGCGCTGCTGTTTCCACGATGGTATCTATGTaGTTCCGGACAGAGCTCCTCCGCGCCCGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: VTCAAVSTMVSM*FRTELLRARSP
Trigger: GGGCGAGCGGGCGCGGAGGAGCTCTGTCCGGAATCACATAGATACCATCGTGGAAACAGCAGCGCAGGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338017.8
CDS CCA 72 bp CCCCGCAGAACGGAGGGCTCCTGGAATACTTCTCCGTaGCGGTCGATCCTGGAAGGAGCCTTCTTGGGAACC +
Preference number: 6 (lower is better)
Translates to: PRRTEGSWNTSP*RSILEGAFLGT
Trigger: GGTTCCCAAGAAGGCTCCTTCCAGGATCGACCGCCACGGAGAAGTATTCCAGGAGCCCTCCGTTCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS CCA 72 bp CCGCACCTTAGAACTCCGTGGGCCTTTGGTGCAGAATaGGTTAAGCCGGATGATCTTGGAGCTGGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: PHLRTPWAFGAE*VKPDDLGAGGG
Trigger: CCCACCCCCAGCTCCAAGATCATCCGGCTTAACCCATTCTGCACCAAAGGCCCACGGAGTTCTAAGGTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS CCA 72 bp AGCCTCAGATCCACGTCTGCGGAAAGTGGCTGCGAGTaGGGTGCAAAAATAAAGCCCAACCCAGCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: SLRSTSAESGCE*GAKIKPNPAQR
Trigger: CCGCTGGGCTGGGTTGGGCTTTATTTTTGCACCCCACTCGCAGCCACTTTCCGCAGACGTGGATCTGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596188.2
CDS GCA 72 bp TGCATGGAGCCACAGTCAGGATTCCCCAGGCCTTCGTaGTTCACTGTGGGTTTCTTGTTGCGTCGCAGGACA +
Preference number: 6 (lower is better)
Translates to: CMEPQSGFPRPS*FTVGFLLRRRT
Trigger: TGTCCTGCGACGCAACAAGAAACCCACAGTGAAGCACGAAGGCCTGGGGAATCCTGACTGTGGCTCCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 72 bp GCTGAGATGGAGGCAGGATGCGCACGTCAAAATCACTaGCGGTGCCCATGGGACATAGCTCTTGTTTGTTGG +
Preference number: 6 (lower is better)
Translates to: AEMEAGCARQNH*RCPWDIALVCW
Trigger: CCAACAAACAAGAGCTATGTCCCATGGGCACCGGCAGTGATTTTGACGTGCGCATCCTGCCTCCATCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CCA 72 bp TGGTTTTGTGGTCATGCTTCCTTAGCTGCAGCTGCATaGAGCCACAGTCAGGATTCCCCAGGCCTTCGTGCT +
Preference number: 6 (lower is better)
Translates to: WFCGHASLAAAA*SHSQDSPGLRA
Trigger: AGCACGAAGGCCTGGGGAATCCTGACTGTGGCTCCATGCAGCTGCAGCTAAGGAAGCATGACCACAAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 90 bp GAAGGAGACGGGTTAATTATCCGCACCTTAGAACTCCGTGGGCCTTaGGTGCAGAATGGGTTAAGCCGGATGATCTTGGAGCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: EGDGLIIRTLELRGP*VQNGLSRMILELGV
Trigger: CACCCCCAGCTCCAAGATCATCCGGCTTAACCCATTCTGCACCAAAGGCCCACGGAGTTCTAAGGTGCGGATAATTAACCCGTCTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS CCA 72 bp ACCATTGGGAGTGGTGTAGCCATTTTCCAGCTGAGATaGAGGCAGGATGCGCACGTCAAAATCACTGCCGGT +
Preference number: 6 (lower is better)
Translates to: TIGSGVAIFQLR*RQDAHVKITAG
Trigger: ACCGGCAGTGATTTTGACGTGCGCATCCTGCCTCCATCTCAGCTGGAAAATGGCTACACCACTCCCAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 90 bp TCCTGGAATACTTCTCCGTGGCGGTCGATCCTGGAAGGAGCCTTCTaGGGAACCAATTTCCTAGGATCCAGTAGTATTCGCACTCCCCCT +
Preference number: 6 (lower is better)
Translates to: SWNTSPWRSILEGAF*GTNFLGSSSIRTPP
Trigger: AGGGGGAGTGCGAATACTACTGGATCCTAGGAAATTGGTTCCCAAGAAGGCTCCTTCCAGGATCGACCGCCACGGAGAAGTATTCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS TCA 72 bp GAGGAGGCACCCTTGTTTGGTAAGACACAATCTGACTaGGATTGCGGTTGGAGAGGGCTTTGCCTGCAACGA +
Preference number: 6 (lower is better)
Translates to: EEAPLFGKTQSD*DCGWRGLCLQR
Trigger: TCGTTGCAGGCAAAGCCCTCTCCAACCGCAATCTCAGTCAGATTGTGTCTTACCAAACAAGGGTGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp TCAAGGACCCCGCTGACAGGCAGGTACATGAATTTGTaGTTCCTCAGGTTCAGTCTAGCTAAGGGTGCTCCG +
Preference number: 6 (lower is better)
Translates to: SRTPLTGRYMNL*FLRFSLAKGAP
Trigger: CGGAGCACCCTTAGCTAGACTGAACCTGAGGAACAACAAATTCATGTACCTGCCTGTCAGCGGGGTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp CCATGGGTTGCCCTCCAAGTCAATCTGTGTAAGAGATaGCAACTGATCAAGGACCCCGCTGACAGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: PWVALQVNLCKR*QLIKDPADRQV
Trigger: TACCTGCCTGTCAGCGGGGTCCTTGATCAGTTGCAATCTCTTACACAGATTGACTTGGAGGGCAACCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp ACTTCTCCGTGGCGGTCGATCCTGGAAGGAGCCTTCTaGGGAACCAATTTCCTAGGATCCAGTAGTATTCGC +
Preference number: 6 (lower is better)
Translates to: TSPWRSILEGAF*GTNFLGSSSIR
Trigger: GCGAATACTACTGGATCCTAGGAAATTGGTTCCCAAGAAGGCTCCTTCCAGGATCGACCGCCACGGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS CAA 90 bp TTCTCTTGGCAGTTCACACTTAGTCCCAAATCTGAAGGGTGTGTTTaGCAGAAGCAAGGTGCCGGGCAAGGTGTTAGAGGAGGCACCCTT +
Preference number: 6 (lower is better)
Translates to: FSWQFTLSPKSEGCV*QKQGAGQGVRGGTL
Trigger: AAGGGTGCCTCCTCTAACACCTTGCCCGGCACCTTGCTTCTGCAAAACACACCCTTCAGATTTGGGACTAAGTGTGAACTGCCAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 72 bp GCACTGAGCCCAAGAAAGGCTCCTCCCTCAATGTTCTaGAGTTTATTATTCCCCAGATGCAGGGAGACTGCA +
Preference number: 6 (lower is better)
Translates to: ALSPRKAPPSMF*SLLFPRCRETA
Trigger: TGCAGTCTCCCTGCATCTGGGGAATAATAAACTGCAGAACATTGAGGGAGGAGCCTTTCTTGGGCTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 72 bp ATGGAGGCAGGATGCGCACGTCAAAATCACTGCCGGTaGCCATGGGACATAGCTCTTGTTTGTTGGTTTCTT +
Preference number: 6 (lower is better)
Translates to: MEAGCARQNHCR*PWDIALVCWFL
Trigger: AAGAAACCAACAAACAAGAGCTATGTCCCATGGGCACCGGCAGTGATTTTGACGTGCGCATCCTGCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CCA 72 bp CACAGTCAGGATTCCCCAGGCCTTCGTGCTTCACTGTaGGTTTCTTGTTGCGTCGCAGGACAAAAACAAGAA +
Preference number: 6 (lower is better)
Translates to: HSQDSPGLRASL*VSCCVAGQKQE
Trigger: TTCTTGTTTTTGTCCTGCGACGCAACAAGAAACCCACAGTGAAGCACGAAGGCCTGGGGAATCCTGACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CCA 72 bp AGGAGACGGGTTAATTATCCGCACCTTAGAACTCCGTaGGCCTTTGGTGCAGAATGGGTTAAGCCGGATGAT +
Preference number: 6 (lower is better)
Translates to: RRRVNYPHLRTP*AFGAEWVKPDD
Trigger: ATCATCCGGCTTAACCCATTCTGCACCAAAGGCCCACGGAGTTCTAAGGTGCGGATAATTAACCCGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS CAA 72 bp GGGTTAATTATCCGCACCTTAGAACTCCGTGGGCCTTaGGTGCAGAATGGGTTAAGCCGGATGATCTTGGAG +
Preference number: 6 (lower is better)
Translates to: GLIIRTLELRGP*VQNGLSRMILE
Trigger: CTCCAAGATCATCCGGCTTAACCCATTCTGCACCAAAGGCCCACGGAGTTCTAAGGTGCGGATAATTAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356928.2
CDS CAA 72 bp GGATTCCCCAGGCCTTCGTGCTTCACTGTGGGTTTCTaGTTGCGTCGCAGGACAAAAACAAGAAGGCAAAAA +
Preference number: 6 (lower is better)
Translates to: GFPRPSCFTVGF*LRRRTKTRRQK
Trigger: TTTTTGCCTTCTTGTTTTTGTCCTGCGACGCAACAAGAAACCCACAGTGAAGCACGAAGGCCTGGGGAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS TCA 72 bp TTGCCCTCCAAGTCAATCTGTGTAAGAGATTGCAACTaGTCAAGGACCCCGCTGACAGGCAGGTACATGAAT +
Preference number: 6 (lower is better)
Translates to: LPSKSICVRDCN*SRTPLTGRYMN
Trigger: ATTCATGTACCTGCCTGTCAGCGGGGTCCTTGATCAGTTGCAATCTCTTACACAGATTGACTTGGAGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 72 bp AATCTGACTGAGATTGCGGTTGGAGAGGGCTTTGCCTaGAACGATTCCAGAGATCTTGGAAGGATTTGTTGT +
Preference number: 6 (lower is better)
Translates to: NLTEIAVGEGFA*NDSRDLGRICC
Trigger: ACAACAAATCCTTCCAAGATCTCTGGAATCGTTGCAGGCAAAGCCCTCTCCAACCGCAATCTCAGTCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp CCTTCAAAGTCAGTGAAGTCTGATACGTCCACATCCTaGATGCTATTGCCATTGACGTGCAGCTTCTTCGCA +
Preference number: 6 (lower is better)
Translates to: PSKSVKSDTSTS*MLLPLTCSFFA
Trigger: TGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAAGGATGTGGACGTATCAGACTTCACTGACTTTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp TTTAATGCCACCAAGTCACAAGTACAGTCCCATGGGTaGCCCTCCAAGTCAATCTGTGTAAGAGATTGCAAC +
Preference number: 6 (lower is better)
Translates to: FNATKSQVQSHG*PSKSICVRDCN
Trigger: GTTGCAATCTCTTACACAGATTGACTTGGAGGGCAACCCATGGGACTGTACTTGTGACTTGGTGGCATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 90 bp CCTTCAAAGTCAGTGAAGTCTGATACGTCCACATCCTTGATGCTATaGCCATTGACGTGCAGCTTCTTCGCATTTAAAGGTTTCGGTATC +
Preference number: 6 (lower is better)
Translates to: PSKSVKSDTSTSLML*PLTCSFFAFKGFGI
Trigger: GATACCGAAACCTTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAAGGATGTGGACGTATCAGACTTCACTGACTTTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS TCA 72 bp AGACCAAGGTGGTTTCAGCTGATTTGGTCTGTAGACTaGAACCTTCTCACAGTTGACATAGAGCACATTCTC +
Preference number: 6 (lower is better)
Translates to: RPRWFQLIWSVD*NLLTVDIEHIL
Trigger: GAGAATGTGCTCTATGTCAACTGTGAGAAGGTTTCAGTCTACAGACCAAATCAGCTGAAACCACCTTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS TCA 72 bp ATTCATTGTTGTTCAAGTGCAACTGCTTTAATGCACTaGGCCCAAGAAAGGCTCCTCCCTCAATGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: IHCCSSATALMH*AQERLLPQCSA
Trigger: TGCAGAACATTGAGGGAGGAGCCTTTCTTGGGCTCAGTGCATTAAAGCAGTTGCACTTGAACAACAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS GCA 72 bp GATACGTCCACATCCTTGATGCTATTGCCATTGACGTaGAGCTTCTTCGCATTTAAAGGTTTCGGTATCAGT +
Preference number: 6 (lower is better)
Translates to: DTSTSLMLLPLT*SFFAFKGFGIS
Trigger: ACTGATACCGAAACCTTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAAGGATGTGGACGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp AAGTCTGATACGTCCACATCCTTGATGCTATTGCCATaGACGTGCAGCTTCTTCGCATTTAAAGGTTTCGGT +
Preference number: 6 (lower is better)
Translates to: KSDTSTSLMLLP*TCSFFAFKGFG
Trigger: ACCGAAACCTTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAAGGATGTGGACGTATCAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp TCAGTGAAGTCTGATACGTCCACATCCTTGATGCTATaGCCATTGACGTGCAGCTTCTTCGCATTTAAAGGT +
Preference number: 6 (lower is better)
Translates to: SVKSDTSTSLML*PLTCSFFAFKG
Trigger: ACCTTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAAGGATGTGGACGTATCAGACTTCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 90 bp AAGTCAGTGAAGTCTGATACGTCCACATCCTTGATGCTATTGCCATaGACGTGCAGCTTCTTCGCATTTAAAGGTTTCGGTATCAGTTCA +
Preference number: 6 (lower is better)
Translates to: KSVKSDTSTSLMLLP*TCSFFAFKGFGISS
Trigger: TGAACTGATACCGAAACCTTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAAGGATGTGGACGTATCAGACTTCACTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 90 bp AAATCCAGTCCTTCAAAGTCAGTGAAGTCTGATACGTCCACATCCTaGATGCTATTGCCATTGACGTGCAGCTTCTTCGCATTTAAAGGT +
Preference number: 6 (lower is better)
Translates to: KSSPSKSVKSDTSTS*MLLPLTCSFFAFKG
Trigger: ACCTTTAAATGCGAAGAAGCTGCACGTCAATGGCAATAGCATCAAGGATGTGGACGTATCAGACTTCACTGACTTTGAAGGACTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS TCA 72 bp ATGAAGCAAATCCAGTCCTTCAAAGTCAGTGAAGTCTaGTACGTCCACATCCTTGATGCTATTGCCATTGAC +
Preference number: 6 (lower is better)
Translates to: MKQIQSFKVSEV*YVHILDAIAID
Trigger: GTCAATGGCAATAGCATCAAGGATGTGGACGTATCAGACTTCACTGACTTTGAAGGACTGGATTTGCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CCA 72 bp ATGAACCCAGTTTCTGACTCTTTCAAGCCACAAGTGTaGCTCTTGCTCATCTGTTCTATAGTTTGTGGAATG +
Preference number: 6 (lower is better)
Translates to: MNPVSDSFKPQV*LLLICSIVCGM
Trigger: CATTCCACAAACTATAGAACAGATGAGCAAGAGCCACACTTGTGGCTTGAAAGAGTCAGAAACTGGGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 90 bp GCAGGTGCAGGGCTTGTGAATGGTGCAGACGGCTTATTTAAAAGTTaGGGACATAAGATTTCATTTTTGAGGGACTTCAGTTCAATGTTG +
Preference number: 6 (lower is better)
Translates to: AGAGLVNGADGLFKS*GHKISFLRDFSSML
Trigger: CAACATTGAACTGAAGTCCCTCAAAAATGAAATCTTATGTCCCAAACTTTTAAATAAGCCGTCTGCACCATTCACAAGCCCTGCACCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS TCA 72 bp TCATTTTTGAGGGACTTCAGTTCAATGTTGGCAAACTaGACAGGCGTCTCACATTTCAGTTCTTTCACAACA +
Preference number: 6 (lower is better)
Translates to: SFLRDFSSMLAN*TGVSHFSSFTT
Trigger: TGTTGTGAAAGAACTGAAATGTGAGACGCCTGTTCAGTTTGCCAACATTGAACTGAAGTCCCTCAAAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CCA 72 bp ATTCATCCAGCTCATCAATTGTGCTCAGTCTCTTCCTaGTATCTACATGTAATAAATCTTTCTCCTTGTCGG +
Preference number: 6 (lower is better)
Translates to: IHPAHQLCSVSS*YLHVINLSPCR
Trigger: CCGACAAGGAGAAAGATTTATTACATGTAGATACCAGGAAGAGACTGAGCACAATTGATGAGCTGGATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp CAGTTTCGCCTTCAGTTCAAAATACTCACTCTTCCTTaGTTCCACAACAATTTTACTGTGGTTGCCACCTAT +
Preference number: 6 (lower is better)
Translates to: QFRLQFKILTLP*FHNNFTVVATY
Trigger: ATAGGTGGCAACCACAGTAAAATTGTTGTGGAACAAAGGAAGAGTGAGTATTTTGAACTGAAGGCGAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2
CDS CAA 72 bp CTCTTCCTGGTATCTACATGTAATAAATCTTTCTCCTaGTCGGCCACATTTCTCATAACAACTTTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LFLVSTCNKSFS*SATFLITTFCP
Trigger: AGGACAGAAAGTTGTTATGAGAAATGTGGCCGACAAGGAGAAAGATTTATTACATGTAGATACCAGGAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338017.8
ENST00000356928.2
ENST00000596188.2