RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLITRK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000121871

Ensembl transcript IDs: ENST00000241274.3, ENST00000475390.2, ENST00000497724.1

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGAGTaGGAACATTCGAGCAAGACCCGCCCCCTCCCTCCCCATCTTGCA +
Preference number: 1 (lower is better)
Translates to: PWSADGYVYERQDSE*EHSSKTRPLPPHLA
Trigger: TGCAAGATGGGGAGGGAGGGGGCGGGTCTTGCTCGAATGTTCTCACTCACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTaGAGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGA +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVPAPAGRN*RFRDHGLQMDMCMR
Trigger: TCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR GCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTCCTCCCTCCCCATCTTaGAGTTTCCAGGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTPPSPS*SFQACS
Trigger: GCTGCATGCCTGGAAACTGCAAGATGGGGAGGGAGG...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR CAA 90 bp GTGAGTGAGAACATTCGAGCAAGACCCGCCCCCTCCCTCCCCATCTaGCAGTTTCCAGGCATGCAGCAAACTGCATTGTTAATACATGTA +
Preference number: 2 (lower is better)
Translates to: VSENIRARPAPSLPI*QFPGMQQTALLIHV
Trigger: TACATGTATTAACAATGCAGTTTGCTGCATGCCTGGAAACTGCAAGATGGGGAGGGAGGGGGCGGGTCTTGCTCGAATGTTCTCACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR GCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGCCAGCAGGAAGAAACTaGAGGTTTAGGGACCATGGT +
Preference number: 2 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMPAGRN*RFRDHG
Trigger: ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGG...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR GCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAAATAATGATAACATTTaGTGGCAAAAGTCTGCGAAG +
Preference number: 2 (lower is better)
Translates to: SLGVCLRLLNHQASTSVENNDNI*WQKSAK
Trigger: CTTCGCAGACTTTTGCCAGCAAATGTTATCATTATT...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR GCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGCATGCAGCAAACTaGATTGTTAATACATGTACA +
Preference number: 2 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVRHAAN*IVNTCT
Trigger: TGTACATGTATTAACAATGCAGTTTGCTGCATGCCT...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATGATAACATTTGCTaGCAAAAGTCTGCGAAGGCA +
Preference number: 2 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCNDNIC*QKSAKA
Trigger: TGCCTTCGCAGACTTTTGCCAGCAAATGTTATCATT...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR CAA 90 bp GGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTTAGTTTaGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGACAA +
Preference number: 2 (lower is better)
Translates to: GEHTSVFSSYHAVLV*FRVGKIVRMELLGQ
Trigger: TTGTCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR GCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTACAGAATCTGTaGCATGATGATAAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVHVQNL*HDDKKE
Trigger: TTCTTTCTTATCATCATGGCACAGATTCTGTACATG...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR GCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATAGGCATGCAGCAAACTaGATTGTTAATACATGTACA +
Preference number: 2 (lower is better)
Translates to: TMERRKMDQTRTKQIELNRHAAN*IVNTCT
Trigger: TGTACATGTATTAACAATGCAGTTTGCTGCATGCCT...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR TCA 72 bp GCAGATGGATATGTGTATGAGAGACAAGATAGTGAGTaGGAACATTCGAGCAAGACCCGCCCCCTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: ADGYVYERQDSE*EHSSKTRPLPP
Trigger: GGGAGGGAGGGGGCGGGTCTTGCTCGAATGTTCTCACTCACTATCTTGTCTCTCATACACATATCCATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR CAA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAACATGCGGTTTTAGTTTaGTTCAGGGTAGGAAAGATC +
Preference number: 3 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEHAVLV*FRVGKI
Trigger: GATCTTTCCTACCCTGAACAAAACTAAAACCGCATG...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR CAA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGGCGAAGGCACTTTCATaGATTAATGATCTGAGTATG +
Preference number: 3 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVAKALS*INDLSM
Trigger: CATACTCAGATCATTAATCAATGAAAGTGCCTTCGC...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR-3UTR CAA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATCATGCGGTTTTAGTTTaGTTCAGGGTAGGAAAGATC +
Preference number: 3 (lower is better)
Translates to: TMERRKMDQTRTKQIELNHAVLV*FRVGKI
Trigger: GATCTTTCCTACCCTGAACAAAACTAAAACCGCATG...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTATGGTGGCGGAACCCTaGCAAGTCTCCCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTMVAEP*QVSPSS
Trigger: GGAACTGGGGGAGACTTGGCAGGGTTCCGCCACCAT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCCCTATGCCCTCGATaGTTGGTAGGCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTSLCPR*LVGRQA
Trigger: TGCCTGCCTGCCTACCAACCATCGAGGGCATAGGGA...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAACCACAAATCCCACTGTaGAGGGGGCAGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEPQIPL*RGQAVA
Trigger: GGCCACAGCCTGCCCCCTGCACAGTGGGATTTGTGG...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTGGGGATTCTCCAGCTaGTGCAACGTGCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTWGFSS*CNVQHL
Trigger: GAGATGCTGCACGTTGCACCAGCTGGAGAATCCCCA...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTCTCACCCATTCCCGGTaGTTGTGTCCCTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGLTHSR*LCPWTP
Trigger: GGGGGTCCAGGGACACAACCACCGGGAATGGGTGAG...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTTGCCCTTTAGGTGGGTaGGAGTGGGGGTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGCPLGG*EWGLVA
Trigger: CGCCACCAACCCCCACTCCCACCCACCTAAAGGGCA...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAAGTTCTTCCTCAGGTTaGGCCGGGCCAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVESSSSG*AGPGMC
Trigger: GCACATCCCTGGCCCGGCTCAACCTGAGGAAGAACT...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTTGGTGGCGTGTAGATaGGAGAAGAAAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTLVACR*EKKRVG
Trigger: CCCCACCCTTTTCTTCTCTCATCTACACGCCACCAA...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAGTGCGCACATCACGGTaGGTGAGGTTCTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEVRTSR*VRFSGL
Trigger: GAGCCCTGAGAACCTCACGCACCGTGATGTGCGCAC...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAAGGATCTCCGAGGTTTaGTGCGAGGGGCTACCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVERISEV*CEGLPS
Trigger: GCTGGGTAGCCCCTCGCAGCAAACCTCGGAGATCCT...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTCGTCTCCTCCTAAACTaGAGCGCCAGGTCGTGTATA +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTRLLLN*SARSCI
Trigger: TATACACGACCTGGCGCTCCAGTTTAGGAGGAGACG...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTCGGTGGTTGTGTCCCTaGACCCCCACGTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGRWLCP*TPTFCT
Trigger: AGTGCAGAACGTGGGGGTCCAGGGACACAACCACCG...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGCTCACCCATTCCCGGTaGTTGTGTCCCTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMLTHSR*LCPWTP
Trigger: GGGGGTCCAGGGACACAACCACCGGGAATGGGTGAG...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTACCAACCACACTGACTaGGCTGATGGTTTCGATCCA +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTTNHTD*ADGFDP
Trigger: TGGATCGAAACCATCAGCTCAGTCAGTGTGGTTGGT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATGCACATCACGGTGCGTaGGGTTCTCAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDAHHGA*GSQGSC
Trigger: GCAGGAGCCCTGAGAACCTCACGCACCGTGATGTGC...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTGGTGCCCCAATAAGGTaGGAATCTCCAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGGAPIR*ESPGWA
Trigger: AGCCCAGCCTGGAGATTCTCACCTTATTGGGGCACC...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAGGTGCCCCAATAAGGTaGGAATCTCCAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEGAPIR*ESPGWA
Trigger: AGCCCAGCCTGGAGATTCTCACCTTATTGGGGCACC...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTCCTGCCGCTTGCTTCTaGAGGGCAGCTTCTTTCGAC +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGPAACF*RAASFD
Trigger: GTCGAAAGAAGCTGCCCTTCAGAAGCAAGCGGCAGG...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAGGGCTGGAACCTGAATaGAAATCCATCAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEGLEPE*KSISRP
Trigger: GGGGCGGCTGATGGATTTGCATTCAGGTTCCAGCCC...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS-3UTR GCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGTCACAGCGCAATCCCTaGCCGAGGCCTCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMSQRNP*PRPPSI
Trigger: GATGGAAGGAGGCCTCGGGCAGGGATTGCGCTGTGA...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTGACCACAGCTCCCTATaGCCTCGATGGTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGDHSSL*PRWLVG
Trigger: GCCTACCAACCATCGAGGGCATAGGGAGCTGTGGTC...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTGGGGATTGGTGGTCTaGTCTGATAAGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTWGLVV*SDKEQW
Trigger: CCATTGCTCCTTATCAGACCAGACCACCAATCCCCA...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
3UTR CAA 72 bp AACATTCGAGCAAGACCCGCCCCCTCCCTCCCCATCTaGCAGTTTCCAGGCATGCAGCAAACTGCATTGTTA +
Preference number: 4 (lower is better)
Translates to: NIRARPAPSLPI*QFPGMQQTALL
Trigger: TAACAATGCAGTTTGCTGCATGCCTGGAAACTGCAAGATGGGGAGGGAGGGGGCGGGTCTTGCTCGAATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAGCCGGGCCAGGGATGTaGCAGCAAAGGCGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGAGPGM*QQRRLL
Trigger: CAACAGACGCCTTTGCTGGCACATCCCTGGCCCGGC...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTCAGGGAAATGGTCGCTaGATACCAATGGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGQGNGR*IPMGER
Trigger: CCGCTCTCCCATTGGTATGCAGCGACCATTTCCCTG...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATTTGGGAGGTGGAGGGTaGCCTTGGTGTTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDLGGGG*PWCSRL
Trigger: CAGCCTCGAACACCAAGGCCACCCTCCACCTCCCAA...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTAGCAACAAAGACTGCTaGGAAAAACAGAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTSNKDC*EKQNQQ
Trigger: CTGCTGGTTCTGTTTTTCTCAGCAGTCTTTGTTGCT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATCCTGCCGCTTGCTTCTaGAGGGCAGCTTCTTTCGAC +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDPAACF*RAASFD
Trigger: GTCGAAAGAAGCTGCCCTTCAGAAGCAAGCGGCAGG...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGCATGAGGCTGAAGGCTaGAGGCTGGATTTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMHEAEG*RLDFPD
Trigger: ATCCGGGAAATCCAGCCTGCAGCCTTCAGCCTCATG...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATAGGTCCACACCTTCCTaGCGCTTGCTTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDRSTPS*RLLLKG
Trigger: GCCCTTCAGAAGCAAGCGGCAGGAAGGTGTGGACCT...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTGATCTAGTAGCATACTaGCACTACCACAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGDLVAY*HYHSLP
Trigger: GGGGAGGCTGTGGTAGTGGCAGTATGCTACTAGATC...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTCCACGTAGGTCCAAATaGGTTAAAGAGACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTPRRSK*VKETAL
Trigger: TAAGGCTGTCTCTTTAACCCATTTGGACCTACGTGG...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGTGGGGATTCTCCAGCTaGTGCAACGTGCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMWGFSS*CNVQHL
Trigger: GAGATGCTGCACGTTGCACCAGCTGGAGAATCCCCA...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACCCCACCAACTGCTaGGTGGTGAGGGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVNPTNC*VVRVMV
Trigger: CACCATCACCCTCACCACCCAGCAGTTGGTGGGGTT...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAACCACCATTTTTCTCATaGTGGCGGAACCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEPPFFS*WRNPAK
Trigger: CTTGGCAGGGTTCCGCCACCATGAGAAAAATGGTGG...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATGGTGGGAGTGGGGGTTaGTGGCGTGTAGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDGGSGG*WRVDER
Trigger: TCTCTCATCTACACGCCACCAACCCCCACTCCCACC...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAAGCCAAGGTCATTaGTGTGCAAATTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTSSQGH*CANYRY
Trigger: GTACCTGTAATTTGCACATCAATGACCTTGGCTTGA...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGAGTTCTTCCTCAGGTTaGGCCGGGCCAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVSSSSG*AGPGMC
Trigger: GCACATCCCTGGCCCGGCTCAACCTGAGGAAGAACT...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGCACATCACGGTGCGTaGGGTTCTCAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTAHHGA*GSQGSC
Trigger: GCAGGAGCCCTGAGAACCTCACGCACCGTGATGTGC...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAAGAAAACTCATAAGGTaGTGCACTGGTTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVERKLIR*CTGWCP
Trigger: GGGGCACCAACCAGTGCATCACCTTATGAGTTTTCT...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTACTCATACACATaGCCCACGGGAGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVMYSYT*PTGGAF
Trigger: GAAGGCCCCTCCCGTGGGTCATGTGTATGAGTACAT...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAGGGTTTGGTGGTCTGTaGAGCCCTTTCCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGGFGGL*SPFQPR
Trigger: TCTCGGCTGGAAAGGGCTTCACAGACCACCAAACCC...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGGTGCGCACATCACGGTaGGTGAGGTTCTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVVRTSR*VRFSGL
Trigger: GAGCCCTGAGAACCTCACGCACCGTGATGTGCGCAC...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGATTCTCCAGCTGGTaGAACGTGCAGCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVGFSSW*NVQHLW
Trigger: CCAGAGATGCTGCACGTTGCACCAGCTGGAGAATCC...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGCACCTAGCGCGGCGATaGCAGCGACAGGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELHLARR*QRQGAH
Trigger: GTGAGCTCCCTGTCGCTGGCATCGCCGCGCTAGGTG...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGATAAAGCTTGGGAGGTaGAGGGTGGCCTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMIKLGR*RVALVF
Trigger: GAACACCAAGGCCACCCTCCACCTCCCAAGCTTTAT...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAACACGAGGCTTGTAGATaGGGTTGTTGCACATTTGGG +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEHEACR*GCCTFG
Trigger: CCCAAATGTGCAACAACCCCATCTACAAGCCTCGTG...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCACTCCCTGCTTCTTaGGCTGATGAAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVALPAS*ADETAT
Trigger: GGTGGCTGTTTCATCAGCCCAAGAAGCAGGGAGTGC...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTGTCAGACGGCGAAGGTaGGGGGAAAGAAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFVRRRR*GERRRG
Trigger: CCCTCTCCTTCTTTCCCCCCACCTTCGCCGTCTGAC...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGCTCTGGATCAGTaGAGAGCTTCGTTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVGALDQ*RASLFP
Trigger: CGGGAACAACGAAGCTCTCCACTGATCCAGAGCACC...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGGTCGCTGCATACCAATaGGAGAGCGGGGCGCGCACC +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELVAAYQ*ESGART
Trigger: GGTGCGCGCCCCGCTCTCCCATTGGTATGCAGCGAC...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTCGCAGGGCTGGAACCTaGATGCAAATCCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFRRAGT*MQIHQP
Trigger: CGGCTGATGGATTTGCATTCAGGTTCCAGCCCTGCG...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS-3UTR TCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGCTCGCTCTTTGCAGTTaGCAGTCAAGCCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMLALCS*QSSQGH
Trigger: ATGACCTTGGCTTGACTGTCAACTGCAAAGAGCGAG...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTCCCAAGGATTCTCATTaGGGTCTATCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGPKDSH*GLSGQW
Trigger: CCATTGTCCAGATAGACCTCAATGAGAATCCTTGGG...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTTCCCCCAACTACTCCTaGAACCCCACCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFSPNYS*NPTNCW
Trigger: CCAGCAGTTGGTGGGGTTTCAGGAGTAGTTGGGGGA...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAGCTCCATCAGGCTTCTaGCAATGTGATCTAGCATTC +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEAPSGF*QCDLAF
Trigger: GAATGCTAGATCACATTGGCAGAAGCCTGATGGAGC...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGACATGAGGCTGAAGGCTaGAGGCTGGATTTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGHEAEG*RLDFPD
Trigger: ATCCGGGAAATCCAGCCTGCAGCCTTCAGCCTCATG...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCAGCTGGTGCAACGTaGAGCATCTCTGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCPAGAT*SISGQR
Trigger: TCTTTGCCCAGAGATGCTGCACGTTGCACCAGCTGG...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATATGGTGGCGGAACCCTaGCAAGTCTCCCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNMVAEP*QVSPSS
Trigger: GGAACTGGGGGAGACTTGGCAGGGTTCCGCCACCAT...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGTGCATGCCAGGAGGGTaGACGTGCAGTTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMCMPGG*TCSSFN
Trigger: ATTAAAGGAACTGCACGTGCACCCTCCTGGCATGCA...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGGTGTGTGTGTGTACCTaGACCAGCAGGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMVCVCT*TSRKKL
Trigger: CAGTTTCTTCCTGCTGGTGCAGGTACACACACACAC...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTCACAAAGAGGGTaGTCATCCCTAGGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVVSQRG*SSLGVC
Trigger: ACACACGCCTAGGGATGAGCACCCTCTTTGTGACAC...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATATCTCCGAGGTTTGCTaGGAGGGGCTACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNISEVC*EGLPSR
Trigger: CCTGCTGGGTAGCCCCTCGCAGCAAACCTCGGAGAT...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATGGGTTTTCTTCCAGCTaGAGCTCCATCAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDGFSSS*SSIRLL
Trigger: CAGAAGCCTGATGGAGCTCCAGCTGGAAGAAAACCC...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTTCCTTTCCATGGAAGTaGAAAGGGGTCTCACAGGTA +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGSFPWK*KGVSQV
Trigger: TACCTGTGAGACCCCTTTCCACTTCCATGGAAAGGA...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGGGTGGAGGGTGGCCTTaGTGTTCGAGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVGGGWP*CSRLFG
Trigger: ACCAAACAGCCTCGAACACCAAGGCCACCCTCCACC...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTGGTGGAGGGTGGCCTTaGTGTTCGAGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFGGGWP*CSRLFG
Trigger: ACCAAACAGCCTCGAACACCAAGGCCACCCTCCACC...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATCCAGGATATAAAGCTTaGGAGGTGGAGGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDPGYKA*EVEGGL
Trigger: AAGGCCACCCTCCACCTCCCAAGCTTTATATCCTGG...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGGCCTCGGAACATGCCTaGTGTCAGCTTCTCTATATC +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMASEHA*CQLLYI
Trigger: GATATAGAGAAGCTGACACCAGGCATGTTCCGAGGC...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGAAGGCTGCAGGCTaGATTTCCCGGATGACATTG +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVLKAAG*ISRMTL
Trigger: CAATGTCATCCGGGAAATCCAGCCTGCAGCCTTCAG...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAATCCTCAAACAGCCTGTaGCATTGCATTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVESSNSL*HCIWMP
Trigger: TGGCATCCAAATGCAATGCCACAGGCTGTTTGAGGA...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAGGGTTGTTGCACATTTaGGTAACCGGGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGGLLHI*VTGWGM
Trigger: CATCCCCCACCCGGTTACCCAAATGTGCAACAACCC...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATCCACCATTTTTCTCATaGTGGCGGAACCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDPPFFS*WRNPAK
Trigger: CTTGGCAGGGTTCCGCCACCATGAGAAAAATGGTGG...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAAAAATCTCGGTGCTCTaGATCAGTGGAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEKISVL*ISGELR
Trigger: ACGAAGCTCTCCACTGATCCAGAGCACCGAGATTTT...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCAACCACACTGACTaGGCTGATGGTTTCGATCCA +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVTNHTD*ADGFDP
Trigger: TGGATCGAAACCATCAGCTCAGTCAGTGTGGTTGGT...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTAGCAACAAAGACTGCTaGGAAAAACAGAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGSNKDC*EKQNQQ
Trigger: CTGCTGGTTCTGTTTTTCTCAGCAGTCTTTGTTGCT...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATAGAGAAGGGTTTCTTTaGGCCTGGCATCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDREGFL*AWHPAV
Trigger: TACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCT...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATGCCGGGCCAGGGATGTaGCAGCAAAGGCGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNAGPGM*QQRRLL
Trigger: CAACAGACGCCTTTGCTGGCACATCCCTGGCCCGGC...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTCCACAAATCCCACTGTaGAGGGGGCAGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSPQIPL*RGQAVA
Trigger: GGCCACAGCCTGCCCCCTGCACAGTGGGATTTGTGG...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGACCAGGAGGGTGCACGTaGAGTTCCTTTAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGPGGCT*SSFNLG
Trigger: GCCCAAATTAAAGGAACTGCACGTGCACCCTCCTGG...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTAGTCTGGGTATTGCATaGCAGGAGGGTGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFSLGIA*QEGARA
Trigger: TGCACGTGCACCCTCCTGGCATGCAATACCCAGACT...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATCGTAGGTCCTTTCCATaGAAGTGGAAAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDRRSFP*KWKGVS
Trigger: TGAGACCCCTTTCCACTTCCATGGAAAGGACCTACG...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGTTGGGAGGTGGAGGGTaGCCTTGGTGTTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELLGGGG*PWCSRL
Trigger: CAGCCTCGAACACCAAGGCCACCCTCCACCTCCCAA...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTGCATATAATGGGGATTaGTGGTCTGGTCTGATAAGG +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGAYNGD*WSGLIR
Trigger: CCTTATCAGACCAGACCACCAATCCCCATTATATGC...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAGGTCTATCTGGACAATaGCATTCAAGTGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEGLSGQ*HSSVPG
Trigger: TCCTGGAACACTTGAATGCCATTGTCCAGATAGACC...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATCACGAGGCTTGTAGATaGGGTTGTTGCACATTTGGG +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDHEACR*GCCTFG
Trigger: CCCAAATGTGCAACAACCCCATCTACAAGCCTCGTG...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTTACTATGGTTCTCCTTaGGTGTCTCAGCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGYYGSP*VSQQTA
Trigger: AGCAGTTTGCTGAGACACCCAAGGAGAACCATAGTA...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATCTCAGATCCCAGCATTaGTCAGACGGCGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNLRSQH*SDGEGG
Trigger: CCCACCTTCGCCGTCTGACCAATGCTGGGATCTGAG...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTTTCATCGTTCGTGGTTaGTTACAAAACAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGFIVRG*LQNNVS
Trigger: GGAGACGTTGTTTTGTAATCAACCACGAACGATGAA...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS-3UTR TCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGACAGAACCAGCAGGCTaGGAATTAACACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMTEPAG*ELTQKV
Trigger: CACTTTCTGTGTTAATTCTCAGCCTGCTGGTTCTGT...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATGGCAAAGCACGAAGGTaGAGCGATACCGTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNGKARR*SDTVGR
Trigger: TCTGCCAACGGTATCGCTTCACCTTCGTGCTTTGCC...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTTTGTTCCCGAGAGCCTaGGCTCAGTCTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFLFPRA*AQSLDF
Trigger: GAAATCCAGAGACTGAGCTCAGGCTCTCGGGAACAA...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAAACTCTCTGCGAAGCTaGATTGTATCCATCATACTG +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVENSLRS*IVSIIL
Trigger: CAGTATGATGGATACAATTCAGCTTCGCAGAGAGTT...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATGGGCAGTATAAGGAATaGGTTCCAGCCAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDGQYKE*VPANSS
Trigger: TGAAGAGTTGGCTGGAACGCATTCCTTATACTGCCC...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTGGTTCTCAGGGCTCCTaGAAAGCACATCACCAACCA +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFGSQGS*KAHHQP
Trigger: TGGTTGGTGATGTGCTTTGCAGGAGCCCTGAGAACC...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGGGTTCTCAGGGCTCCTaGAAAGCACATCACCAACCA +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVGSQGS*KAHHQP
Trigger: TGGTTGGTGATGTGCTTTGCAGGAGCCCTGAGAACC...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGCCAGGAGGGTGCACGTaGAGTTCCTTTAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVPGGCT*SSFNLG
Trigger: GCCCAAATTAAAGGAACTGCACGTGCACCCTCCTGG...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTAATAATGATAACATTTaGTGGCAAAAGTCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTNNDNI*WQKSAK
Trigger: CTTCGCAGACTTTTGCCAGCAAATGTTATCATTATT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTAACTTCACAGTAGCATaGATCAAAACAGGGCTCATC +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGNFTVA*IKTGLI
Trigger: GATGAGCCCTGTTTTGATCCATGCTACTGTGAAGTT...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTTCCATGGAAGTaGAAAGGGGTCTCACAGGTA +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVSFPWK*KGVSQV
Trigger: TACCTGTGAGACCCCTTTCCACTTCCATGGAAAGGA...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGATAAAGCTTGGGAGGTaGAGGGTGGCCTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVIKLGR*RVALVF
Trigger: GAACACCAAGGCCACCCTCCACCTCCCAAGCTTTAT...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTCCAGGATATAAAGCTTaGGAGGTGGAGGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFPGYKA*EVEGGL
Trigger: AAGGCCACCCTCCACCTCCCAAGCTTTATATCCTGG...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTCGGAACATGCCTaGTGTCAGCTTCTCTATATC +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCASEHA*CQLLYI
Trigger: GATATAGAGAAGCTGACACCAGGCATGTTCCGAGGC...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTCTGAAGGCTGCAGGCTaGATTTCCCGGATGACATTG +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFLKAAG*ISRMTL
Trigger: CAATGTCATCCGGGAAATCCAGCCTGCAGCCTTCAG...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTCGGTGGTTGTGTCCCTaGACCCCCACGTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSRWLCP*TPTFCT
Trigger: AGTGCAGAACGTGGGGGTCCAGGGACACAACCACCG...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTATGGTGTTAAGCTaGGAGCTGGACACTGCTAGG +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCTMVLS*ELDTAR
Trigger: CCTAGCAGTGTCCAGCTCCCAGCTTAACACCATAGT...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTTCTTTGCCCTTTAGGTaGGTGGGAGTGGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTSLPFR*VGVGVG
Trigger: ACCAACCCCCACTCCCACCCACCTAAAGGGCAAAGA...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAATTGATTACAAAACTATaGTGCAGAGCGCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVELITKL*CRALRI
Trigger: GATCCTGAGCGCTCTGCACCATAGTTTTGTAATCAA...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGCAGTTTAAAAGGTCTTaGCCAGAACTCGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMQFKRS*PELGNL
Trigger: CAGATTACCGAGTTCTGGTCAAGACCTTTTAAACTG...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATTTGAAAGCTCCAGTCTaGATGTCCTGCAATGCATTG +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDLKAPV*MSCNAL
Trigger: CAATGCATTGCAGGACATTCAGACTGGAGCTTTCAA...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATTCCCCCAACTACTCCTaGAACCCCACCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNSPNYS*NPTNCW
Trigger: CCAGCAGTTGGTGGGGTTTCAGGAGTAGTTGGGGGA...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTGGGTTTGGTGGTCTGTaGAGCCCTTTCCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSGFGGL*SPFQPR
Trigger: TCTCGGCTGGAAAGGGCTTCACAGACCACCAAACCC...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGCCAGCTGGTGCAACGTaGAGCATCTCTGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELPAGAT*SISGQR
Trigger: TCTTTGCCCAGAGATGCTGCACGTTGCACCAGCTGG...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTAGGTCCACACCTTCCTaGCGCTTGCTTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSRSTPS*RLLLKG
Trigger: GCCCTTCAGAAGCAAGCGGCAGGAAGGTGTGGACCT...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAAACAGCCTGTGGCATTaGATTTGGATGCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGNSLWH*IWMPVR
Trigger: CCTTACTGGCATCCAAATGCAATGCCACAGGCTGTT...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAACAGCCTGTGGCATTaGATTTGGATGCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCNSLWH*IWMPVR
Trigger: CCTTACTGGCATCCAAATGCAATGCCACAGGCTGTT...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATGATCTAGTAGCATACTaGCACTACCACAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNDLVAY*HYHSLP
Trigger: GGGGAGGCTGTGGTAGTGGCAGTATGCTACTAGATC...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATTGTAAGTCTGGGTATTaGATGCCAGGAGGGTGCACG +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNCKSGY*MPGGCT
Trigger: CGTGCACCCTCCTGGCATGCAATACCCAGACTTACA...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTCCTCCCTCCCCATCTTaGAGTTTCCAGGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSPPSPS*SFQACS
Trigger: GCTGCATGCCTGGAAACTGCAAGATGGGGAGGGAGG...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGCCAGCAGGAAGAAACTaGAGGTTTAGGGACCATGGT +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVPAGRN*RFRDHG
Trigger: ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGG...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGTCCACCTTTGAGACTTaGAGGGAAATGGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVSTFET*REMVAA
Trigger: TGCAGCGACCATTTCCCTGCAAGTCTCAAAGGTGGA...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGGGCAAACTCTCTaGGAAGCTGAATTGTATCCA +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCEGQTL*EAELYP
Trigger: TGGATACAATTCAGCTTCGCAGAGAGTTTGCCCCTC...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATATTACAAAACTATGGTaGAGAGCGCTCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDITKLW*RALRIS
Trigger: GGAGATCCTGAGCGCTCTGCACCATAGTTTTGTAAT...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGCGTAGGTCCTTTCCATaGAAGTGGAAAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVRRSFP*KWKGVS
Trigger: TGAGACCCCTTTCCACTTCCATGGAAAGGACCTACG...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAGGAGCAATGGGAGGCTaGTTTGGACCAGGATATAAA +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGGAMGG*FGPGYK
Trigger: TTTATATCCTGGTCCAAACCAGCCTCCCATTGCTCC...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGCAATGGGAGGCTaGTTTGGACCAGGATATAAA +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCGAMGG*FGPGYK
Trigger: TTTATATCCTGGTCCAAACCAGCCTCCCATTGCTCC...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCTATCTGGACAATaGCATTCAAGTGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVGLSGQ*HSSVPG
Trigger: TCCTGGAACACTTGAATGCCATTGTCCAGATAGACC...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTTCATTGAGGTCTATCTaGACAATGGCATTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGSLRSI*TMAFKC
Trigger: ACACTTGAATGCCATTGTCCAGATAGACCTCAATGA...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGACTGTGGCATTGCATTTaGATGCCAGTAAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGLWHCI*MPVRST
Trigger: TGTGGACCTTACTGGCATCCAAATGCAATGCCACAG...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGGGTAACCGGGTaGGGGATGTACTCATACACA +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCIWVTG*GMYSYT
Trigger: TGTGTATGAGTACATCCCCCACCCGGTTACCCAAAT...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATAACCCCACCAACTGCTaGGTGGTGAGGGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNNPTNC*VVRVMV
Trigger: CACCATCACCCTCACCACCCAGCAGTTGGTGGGGTT...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGCCATTTTTCTCATGGTaGCGGAACCCTGCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVPFFSW*RNPAKS
Trigger: AGACTTGGCAGGGTTCCGCCACCATGAGAAAAATGG...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGGCTTGGTTTGAAGTTTaGCCCTTAACTCGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMAWFEV*PLTRGN
Trigger: ATTACCTCGAGTTAAGGGCCAAACTTCAAACCAAGC...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAAATGATAACATTTGCTaGCAAAAGTCTGCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVENDNIC*QKSAKA
Trigger: TGCCTTCGCAGACTTTTGCCAGCAAATGTTATCATT...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTTTAGGTGGGTGGGAGTaGGGGTTGGTGGCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSLGGWE*GLVACR
Trigger: TCTACACGCCACCAACCCCCACTCCCACCCACCTAA...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGCTTAGGCTGTTTATTTaGGGACTTGTATTCGACAGA +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMLRLFI*GLVFDR
Trigger: TCTGTCGAATACAAGTCCTCAAATAAACAGCCTAAG...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATATGTACTCATACACATaGCCCACGGGAGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNMYSYT*PTGGAF
Trigger: GAAGGCCCCTCCCGTGGGTCATGTGTATGAGTACAT...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTAGAGAAGGGTTTCTTTaGGCCTGGCATCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTREGFL*AWHPAV
Trigger: TACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCT...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTGGATTCTCCAGCTGGTaGAACGTGCAGCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSGFSSW*NVQHLW
Trigger: CCAGAGATGCTGCACGTTGCACCAGCTGGAGAATCC...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTAGTCTGGGTATTGCATaGCAGGAGGGTGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSSLGIA*QEGARA
Trigger: TGCACGTGCACCCTCCTGGCATGCAATACCCAGACT...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAAGGCATGCAGCAAACTaGATTGTTAATACATGTACA +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVERHAAN*IVNTCT
Trigger: TGTACATGTATTAACAATGCAGTTTGCTGCATGCCT...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATCCAGCAGGAAGAAACTaGAGGTTTAGGGACCATGGT +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNPAGRN*RFRDHG
Trigger: ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGG...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGGTGTCACAAAGAGGGTaGTCATCCCTAGGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELVSQRG*SSLGVC
Trigger: ACACACGCCTAGGGATGAGCACCCTCTTTGTGACAC...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTATAATGGGGATTGGTaGTCTGGTCTGATAAGGAGC +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCYNGDW*SGLIRS
Trigger: GCTCCTTATCAGACCAGACCACCAATCCCCATTATA...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAGCATATAATGGGGATTaGTGGTCTGGTCTGATAAGG +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGAYNGD*WSGLIR
Trigger: CCTTATCAGACCAGACCACCAATCCCCATTATATGC...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGCTGTGGCATTGCATTTaGATGCCAGTAAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVLWHCI*MPVRST
Trigger: TGTGGACCTTACTGGCATCCAAATGCAATGCCACAG...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATGGGTTGTTGCACATTTaGGTAACCGGGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNGLLHI*VTGWGM
Trigger: CATCCCCCACCCGGTTACCCAAATGTGCAACAACCC...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTGCACTCCCTGCTTCTTaGGCTGATGAAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSALPAS*ADETAT
Trigger: GGTGGCTGTTTCATCAGCCCAAGAAGCAGGGAGTGC...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACTATGGTTCTCCTTaGGTGTCTCAGCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCYYGSP*VSQQTA
Trigger: AGCAGTTTGCTGAGACACCCAAGGAGAACCATAGTA...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATACTATGGTGTTAAGCTaGGAGCTGGACACTGCTAGG +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNTMVLS*ELDTAR
Trigger: CCTAGCAGTGTCCAGCTCCCAGCTTAACACCATAGT...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGCGAGGTAATCCGGCTTaGTTTGAAGTTTGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVRGNPA*FEVWPL
Trigger: TAAGGGCCAAACTTCAAACCAAGCCGGATTACCTCG...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATAATTCCACTTGGATTTaGGAGATCTCAGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDNSTWI*EISGKA
Trigger: TGCTTTGCCTGAGATCTCCCAAATCCAAGTGGAATT...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACCAAATTCCACTTaGATTTGGGAGATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCTPNST*IWEISG
Trigger: GCCTGAGATCTCCCAAATCCAAGTGGAATTTGGTGT...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGGGAAGGTGTCATTTCTaGAGACATCTAGTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMGRCHF*RHLVCF
Trigger: AAAACAAACTAGATGTCTTCAGAAATGACACCTTCC...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTAGAGTTCTGTCTTCCTaGTTTCTCGTAGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFRVLSS*FLVGPF
Trigger: GAAAGGACCTACGAGAAATCAGGAAGACAGAACTCT...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTCCCAAGGATTCTCATTaGGGTCTATCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTPKDSH*GLSGQW
Trigger: CCATTGTCCAGATAGACCTCAATGAGAATCCTTGGG...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAGAAAACTCATAAGGTaGTGCACTGGTTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELRKLIR*CTGWCP
Trigger: GGGGCACCAACCAGTGCATCACCTTATGAGTTTTCT...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTACAGAACCAGCAGGCTaGGAATTAACACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFTEPAG*ELTQKV
Trigger: CACTTTCTGTGTTAATTCTCAGCCTGCTGGTTCTGT...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGACTAGGTTCCTTTaGTTTAAAATCTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCRTRFL*FKISVL
Trigger: GAGCACCGAGATTTTAAATCAAAGGAACCTAGTCCT...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGTGCATGCCAGGAGGGTaGACGTGCAGTTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELCMPGG*TCSSFN
Trigger: ATTAAAGGAACTGCACGTGCACCCTCCTGGCATGCA...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTCATGTACAGAATCTGTaGCATGATGATAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGHVQNL*HDDKKE
Trigger: TTCTTTCTTATCATCATGGCACAGATTCTGTACATG...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAACATGTACAGAATCTGTaGCATGATGATAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEHVQNL*HDDKKE
Trigger: TTCTTTCTTATCATCATGGCACAGATTCTGTACATG...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGAGGCATGCAGCAAACTaGATTGTTAATACATGTACA +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMRHAAN*IVNTCT
Trigger: TGTACATGTATTAACAATGCAGTTTGCTGCATGCCT...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGGTGTGTGTGTGTACCTaGACCAGCAGGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELVCVCT*TSRKKL
Trigger: CAGTTTCTTCCTGCTGGTGCAGGTACACACACACAC...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTGGTGTCTTTGCTCTTTaGCCTTTAGGTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSGVFAL*PLGGWE
Trigger: CTCCCACCCACCTAAAGGGCAAAGAGCAAAGACACC...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTTATAATGGGGATTGGTaGTCTGGTCTGATAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFYNGDW*SGLIRS
Trigger: GCTCCTTATCAGACCAGACCACCAATCCCCATTATA...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAGGCATTCAAGGGCCTTaGAAGAAGTTCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGGIQGP*KKFRNV
Trigger: AACATTTCTGAACTTCTTCCAAGGCCCTTGAATGCC...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGTTCCTTTAATTTaGGCACTGTTCCATAGAGAC +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCAVPLI*ALFHRD
Trigger: GTCTCTATGGAACAGTGCCCAAATTAAAGGAACTGC...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGAGGTTTCATCGTTCGTaGTTGATTACAAAACTATGG +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMRFHRS*LITKLW
Trigger: CCATAGTTTTGTAATCAACCACGAACGATGAAACCT...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGAAGGTGTCATTTCTaGAGACATCTAGTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVGRCHF*RHLVCF
Trigger: AAAACAAACTAGATGTCTTCAGAAATGACACCTTCC...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTCTCGCTCTTTGCAGTTaGCAGTCAAGCCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSLALCS*QSSQGH
Trigger: ATGACCTTGGCTTGACTGTCAACTGCAAAGAGCGAG...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGACTAAGCAGATTGAGTTaGATGGAAATGGTATGGAGT +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGLSRLS*MEMVWS
Trigger: ACTCCATACCATTTCCATTCAACTCAATCTGCTTAG...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGATCTTGGCATCAGGATaGAGTGTCACAAAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELILASG*SVTKRV
Trigger: CACCCTCTTTGTGACACTTCATCCTGATGCCAAGAT...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGATTCATCGTTCGTGGTTaGTTACAAAACTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGFIVRG*LQNYGA
Trigger: TGCACCATAGTTTTGTAATCAACCACGAACGATGAA...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGCTCATAGAATTCCTCTaGAGATACAGTTTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMLIEFL*RYSLKG
Trigger: ACCTTTTAAACTGTATCTGCAGAGGAATTCTATGAG...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGAATGTCCTGCAATaGATTGTTCCCAAGATTAAT +
Preference number: 4 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVLNVLQ*IVPKIN
Trigger: ATTAATCTTGGGAACAATGCATTGCAGGACATTCAG...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGAACTTCACAGTAGCATaGATCAAAACAGGGCTCATC +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVNFTVA*IKTGLI
Trigger: GATGAGCCCTGTTTTGATCCATGCTACTGTGAAGTT...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTGGCATTCAAGGGCCTTaGAAGAAGTTCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFGIQGP*KKFRNV
Trigger: AACATTTCTGAACTTCTTCCAAGGCCCTTGAATGCC...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTCCATTTTTCTCATGGTaGCGGAACCCTGCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSPFFSW*RNPAKS
Trigger: AGACTTGGCAGGGTTCCGCCACCATGAGAAAAATGG...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTGCTTGGTTTGAAGTTTaGCCCTTAACTCGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFAWFEV*PLTRGN
Trigger: ATTACCTCGAGTTAAGGGCCAAACTTCAAACCAAGC...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGCGAGGTAATCCGGCTTaGTTTGAAGTTTGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELRGNPA*FEVWPL
Trigger: TAAGGGCCAAACTTCAAACCAAGCCGGATTACCTCG...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGATACAAATACACAGTATaGCTGTGCACACCAAATTCC +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGYKYTV*LCTPNS
Trigger: GGAATTTGGTGTGCACAGCCATACTGTGTATTTGTA...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTAGACTTGCAGGGAAATaGTCGCTGCATACCAATGGG +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSRLAGK*SLHTNG
Trigger: CCCATTGGTATGCAGCGACCATTTCCCTGCAAGTCT...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTCAGTTTAAAAGGTCTTaGCCAGAACTCGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTQFKRS*PELGNL
Trigger: CAGATTACCGAGTTCTGGTCAAGACCTTTTAAACTG...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACGGTATATTTTCTaGATCAGATTGCTACTCAGA +
Preference number: 4 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCERYIF*IRLLLR
Trigger: TCTGAGTAGCAATCTGATTCAGAAAATATACCGTTC...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTAAATGTTTCCACCTTTaGGACTTGCAGGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTKCFHL*DLQGNG
Trigger: ACCATTTCCCTGCAAGTCTCAAAGGTGGAAACATTT...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATATCCTAGAGCAATTGTaGTTAGAAGAATTATCCACA +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDILEQL*LEELST
Trigger: TGTGGATAATTCTTCTAAGCACAATTGCTCTAGGAT...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATCTCATAGAATTCCTCTaGAGATACAGTTTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RKDREDGVTGTSVKGARDLIEFL*RYSLKG
Trigger: ACCTTTTAAACTGTATCTGCAGAGGAATTCTATGAG...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTGCTCCATCAGGCTTCTaGCAATGTGATCTAGCATTC +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSAPSGF*QCDLAF
Trigger: GAATGCTAGATCACATTGGCAGAAGCCTGATGGAGC...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATGGGCAGTATAAGGAATaGGTTCCAGCCAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNGQYKE*VPANSS
Trigger: TGAAGAGTTGGCTGGAACGCATTCCTTATACTGCCC...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATCCAAGGTCATTGATGTaGAAATTACAGGTACACCCA +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNPRSLM*KLQVHP
Trigger: TGGGTGTACCTGTAATTTGCACATCAATGACCTTGG...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAAGGTTTCATCGTTCGTaGTTGATTACAAAACAACGT +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGRFHRS*LITKQR
Trigger: ACGTTGTTTTGTAATCAACCACGAACGATGAAACCT...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS-3UTR CCA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTTCAGATACAGTTTCTTaGCATTCAAGGGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTSDTVS*HSRALE
Trigger: TTCCAAGGCCCTTGAATGCCAAGAAACTGTATCTGA...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGTCATTGAGGTCTATCTaGACAATGGCATTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVSLRSI*TMAFKC
Trigger: ACACTTGAATGCCATTGTCCAGATAGACCTCAATGA...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATTCCTCAAACAGCCTGTaGCATTGCATTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNSSNSL*HCIWMP
Trigger: TGGCATCCAAATGCAATGCCACAGGCTGTTTGAGGA...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATTTGGGTAACCGGGTaGGGGATGTACTCATACACA +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSIWVTG*GMYSYT
Trigger: TGTGTATGAGTACATCCCCCACCCGGTTACCCAAAT...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATTGGAGAGGAGAAAAATaGATCAAACCCGAACTAAGC +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNWRGEK*IKPELS
Trigger: GCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCA...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTCTTAGGCTGTTTATTTaGGGACTTGTATTCGACAGA +
Preference number: 4 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTLRLFI*GLVFDR
Trigger: TCTGTCGAATACAAGTCCTCAAATAAACAGCCTAAG...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGCCAAGGTCATTGATGTaGAAATTACAGGTACACCCA +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELPRSLM*KLQVHP
Trigger: TGGGTGTACCTGTAATTTGCACATCAATGACCTTGG...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAAATAATGATAACATTTaGTGGCAAAAGTCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGNNDNI*WQKSAK
Trigger: CTTCGCAGACTTTTGCCAGCAAATGTTATCATTATT...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTTACACAGTATGGCTGTaGACACCAAATTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: NICWQKSAKALSLINDLSYTVWL*TPNSTW
Trigger: CCAAGTGGAATTTGGTGTGCACAGCCATACTGTGTA...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATGATGGAATTAGCCCTTaGTTTTCCAGGGTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNDGISP*FSRVSL
Trigger: CAAAGACACCCTGGAAAAGCAAGGGCTAATTCCATC...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR GCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATGATTTAAAATCTCGGTaGTCTGGATCAGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNDLKSR*SGSVES
Trigger: GCTCTCCACTGATCCAGAGCACCGAGATTTTAAATC...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR TCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATTCAAGCCAAGGTCATTaGTGTGCAAATTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNSSQGH*CANYRY
Trigger: GTACCTGTAATTTGCACATCAATGACCTTGGCTTGA...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTATCCTAGAGCAATTGTaGTTAGAAGAATTATCCACA +
Preference number: 4 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFILEQL*LEELST
Trigger: TGTGGATAATTCTTCTAAGCACAATTGCTCTAGGAT...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR GCA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATCTGAATGTCCTGCAATaGATTGTTCCCAAGATTAAT +
Preference number: 4 (lower is better)
Translates to: SAKALSLINDLSMALPPNLNVLQ*IVPKIN
Trigger: ATTAATCTTGGGAACAATGCATTGCAGGACATTCAG...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATTCAGATACAGTTTCTTaGCATTCAAGGGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNSDTVS*HSRALE
Trigger: TTCCAAGGCCCTTGAATGCCAAGAAACTGTATCTGA...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATTGGAGAGGAGAAAAATaGATCAAACCCGAACTAAGC +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNWRGEK*IKPELS
Trigger: GCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCA...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGGAACGGTATATTTTCTaGATCAGATTGCTACTCAGA +
Preference number: 4 (lower is better)
Translates to: RTMERRKMDQTRTKQIELERYIF*IRLLLR
Trigger: TCTGAGTAGCAATCTGATTCAGAAAATATACCGTTC...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR TCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATCTAAGCAGATTGAGTTaGATGGAAATGGTATGGAGT +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNLSRLS*MEMVWS
Trigger: ACTCCATACCATTTCCATTCAACTCAATCTGCTTAG...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CCA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATAATGATAACATTTGCTaGCAAAAGTCTGCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TMERRKMDQTRTKQIELNNDNIC*QKSAKA
Trigger: TGCCTTCGCAGACTTTTGCCAGCAAATGTTATCATT...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 90 bp CGCTGCATACCAATGGGAGAGCGGGGCGCGCACCTAGCGCGGCGATaGCAGCGACAGGGAGCTCACGACCACAGCTCCCTATGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: RCIPMGERGAHLARR*QRQGAHDHSSLCPR
Trigger: TCGAGGGCATAGGGAGCTGTGGTCGTGAGCTCCCTGTCGCTGGCATCGCCGCGCTAGGTGCGCGCCCCGCTCTCCCATTGGTATGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CCA 90 bp ATACACATGACCCACGGGAGGGGCCTTCTCTGGAGAGGAAAGAGTTaGTCGACCACCACCCCCACTTCCGCCACCACCACCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: IHMTHGRGLLWRGKS*STTTPTSATTTSTI
Trigger: GATGGTGGAGGTGGTGGTGGCGGAAGTGGGGGTGGTGGTCGACCAACTCTTTCCTCTCCAGAGAAGGCCCCTCCCGTGGGTCATGTGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS TCA 90 bp GGACACCAGCCACGGGAAGATAGAGGAAGTAGTTCTTCCTCAGGTTaGGCCGGGCCAGGGATGTGCCAGCAAAGGCGTCTGTTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GHQPREDRGSSSSSG*AGPGMCQQRRLLAE
Trigger: CTCTGCCAACAGACGCCTTTGCTGGCACATCCCTGGCCCGGCTCAACCTGAGGAAGAACTACTTCCTCTATCTTCCCGTGGCTGGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTAGGTGGAGGGTGGCCTaGGTGTTCGAGGCTGTTTGG +
Preference number: 5 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTRWRVA*VFEAVW
Trigger: CCAAACAGCCTCGAACACCAAGGCCACCCTCCACCT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTCTGGAGAGGAAAGAGTaGGTCGACCACCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTLERKE*VDHHPH
Trigger: GTGGGGGTGGTGGTCGACCAACTCTTTCCTCTCCAG...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 90 bp AGGCTGGGCTGGGGATTCTCCAGCTGGTGCAACGTGCAGCATCTCTaGGCAAAGAACTTCCAGCTCAATAGTGCGCACATCACGGTGCGT +
Preference number: 5 (lower is better)
Translates to: RLGWGFSSWCNVQHL*AKNFQLNSAHITVR
Trigger: ACGCACCGTGATGTGCGCACTATTGAGCTGGAAGTTCTTTGCCCAGAGATGCTGCACGTTGCACCAGCTGGAGAATCCCCAGCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 90 bp TGCACTGGTTGGTGCCCCAATAAGGTGAGAATCTCCAGGCTGGGCTaGGGATTCTCCAGCTGGTGCAACGTGCAGCATCTCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: CTGWCPNKVRISRLG*GFSSWCNVQHLWAK
Trigger: CTTTGCCCAGAGATGCTGCACGTTGCACCAGCTGGAGAATCCCCAGCCCAGCCTGGAGATTCTCACCTTATTGGGGCACCAACCAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCTCAGATCCCAGCATaGGTCAGACGGCGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTSQIPA*VRRRRW
Trigger: CCACCTTCGCCGTCTGACCAATGCTGGGATCTGAGA...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS GCA 90 bp AGCCTGTGGCATTGCATTTGGATGCCAGTAAGGTCCACACCTTCCTaGCGCTTGCTTCTGAAGGGCAGCTTCTTTCGACGCCTTCGGAGC +
Preference number: 5 (lower is better)
Translates to: SLWHCIWMPVRSTPS*RLLLKGSFFRRLRS
Trigger: GCTCCGAAGGCGTCGAAAGAAGCTGCCCTTCAGAAGCAAGCGGCAGGAAGGTGTGGACCTTACTGGCATCCAAATGCAATGCCACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGACCCATTCCCGGTGGTaGTGTCCCTGGACCCCCACG +
Preference number: 5 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMTHSRW*CPWTPT
Trigger: CGTGGGGGTCCAGGGACACAACCACCGGGAATGGGT...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 90 bp CCCTTTCCAGCCGAGAAGAGAAGGGTTTCTTTGAGCCTGGCATCCTaGTGTAAGTCTGGGTATTGCATGCCAGGAGGGTGCACGTGCAGT +
Preference number: 5 (lower is better)
Translates to: PFPAEKRRVSLSLAS*CKSGYCMPGGCTCS
Trigger: ACTGCACGTGCACCCTCCTGGCATGCAATACCCAGACTTACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCTTCTCGGCTGGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 90 bp CCATCCGAGAAGATGGAATTAGCCCTTGCTTTTCCAGGGTGTCTTTaGTCTTTGCCCTTTAGGTGGGTGGGAGTGGGGGTTGGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: PSEKMELALAFPGCL*SLPFRWVGVGVGGV
Trigger: CACGCCACCAACCCCCACTCCCACCCACCTAAAGGGCAAAGAGCAAAGACACCCTGGAAAAGCAAGGGCTAATTCCATCTTCTCGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CCA 90 bp CCCAATAAGGTGAGAATCTCCAGGCTGGGCTGGGGATTCTCCAGCTaGTGCAACGTGCAGCATCTCTGGGCAAAGAACTTCCAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: PNKVRISRLGWGFSS*CNVQHLWAKNFQLN
Trigger: ATTGAGCTGGAAGTTCTTTGCCCAGAGATGCTGCACGTTGCACCAGCTGGAGAATCCCCAGCCCAGCCTGGAGATTCTCACCTTATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTAATAGCAGCTTCAAGTaGGGCATGAGGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTNSSFK*GMRLKA
Trigger: AGCCTTCAGCCTCATGCCCAACTTGAAGCTGCTATT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCTCTTCCTCAAAGGTaGTCACTCACAGCGCAATCC +
Preference number: 5 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTSLPQR*SLTAQS
Trigger: GGATTGCGCTGTGAGTGACAACCTTTGAGGAAGAGA...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS TCA 90 bp AGGTCGTGTATAAGGAGTCAATATAGGAAACGCAGGGCTGGAACCTaGATGCAAATCCATCAGCCGCCCCCAAATCGCGCACCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: RSCIRSQYRKRRAGT*MQIHQPPPNRAPRE
Trigger: CTCCCTTGGTGCGCGATTTGGGGGCGGCTGATGGATTTGCATTCAGGTTCCAGCCCTGCGTTTCCTATATTGACTCCTTATACACGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS GCA 90 bp ATCTCTGGGCAAAGAACTTCCAGCTCAATAGTGCGCACATCACGGTaGGTGAGGTTCTCAGGGCTCCTGCAAAGCACATCACCAACCACA +
Preference number: 5 (lower is better)
Translates to: ISGQRTSSSIVRTSR*VRFSGLLQSTSPTT
Trigger: TGTGGTTGGTGATGTGCTTTGCAGGAGCCCTGAGAACCTCACGCACCGTGATGTGCGCACTATTGAGCTGGAAGTTCTTTGCCCAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 90 bp CGAGGTTTGCTGCGAGGGGCTACCCAGCAGGAGGGGCAAACTCTCTaGGAAGCTGAATTGTATCCATCATACTGTAGCCTTGTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RGLLRGATQQEGQTL*EAELYPSYCSLVAS
Trigger: AGAAGCTACAAGGCTACAGTATGATGGATACAATTCAGCTTCGCAGAGAGTTTGCCCCTCCTGCTGGGTAGCCCCTCGCAGCAAACCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CAA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTAAACAGCCTGTGGCATaGCATTTGGATGCCAGTAAG +
Preference number: 5 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTKQPVA*HLDASK
Trigger: CTTACTGGCATCCAAATGCAATGCCACAGGCTGTTT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTGGGTGTCTTTGCTCTTaGCCCTTTAGGTGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGGCLCS*PFRWVG
Trigger: TCCCACCCACCTAAAGGGCAAAGAGCAAAGACACCC...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS TCA 90 bp GAGGTTCTCAGGGCTCCTGCAAAGCACATCACCAACCACACTGACTaGGCTGATGGTTTCGATCCACTGTTTAAAGGGGACCAGGTCACA +
Preference number: 5 (lower is better)
Translates to: EVLRAPAKHITNHTD*ADGFDPLFKGDQVT
Trigger: TGTGACCTGGTCCCCTTTAAACAGTGGATCGAAACCATCAGCTCAGTCAGTGTGGTTGGTGATGTGCTTTGCAGGAGCCCTGAGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 90 bp AATAAGGTGAGAATCTCCAGGCTGGGCTGGGGATTCTCCAGCTGGTaGAACGTGCAGCATCTCTGGGCAAAGAACTTCCAGCTCAATAGT +
Preference number: 5 (lower is better)
Translates to: NKVRISRLGWGFSSW*NVQHLWAKNFQLNS
Trigger: ACTATTGAGCTGGAAGTTCTTTGCCCAGAGATGCTGCACGTTGCACCAGCTGGAGAATCCCCAGCCCAGCCTGGAGATTCTCACCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 90 bp TTAATTTGGGCACTGTTCCATAGAGACAGTCCACAAATCCCACTGTaGAGGGGGCAGGCTGTGGCCTCTCTCGATCTAGTAGCATACTGC +
Preference number: 5 (lower is better)
Translates to: LIWALFHRDSPQIPL*RGQAVASLDLVAYC
Trigger: GCAGTATGCTACTAGATCGAGAGAGGCCACAGCCTGCCCCCTGCACAGTGGGATTTGTGGACTGTCTCTATGGAACAGTGCCCAAATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 90 bp GTGCAAATTACAGGTACACCCAGTGGGGCATATAATGGGGATTGGTaGTCTGGTCTGATAAGGAGCAATGGGAGGCTGGTTTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: VQITGTPSGAYNGDW*SGLIRSNGRLVWTR
Trigger: CCTGGTCCAAACCAGCCTCCCATTGCTCCTTATCAGACCAGACCACCAATCCCCATTATATGCCCCACTGGGTGTACCTGTAATTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAAGGTGGAGGGTGGCCTaGGTGTTCGAGGCTGTTTGG +
Preference number: 5 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGRWRVA*VFEAVW
Trigger: CCAAACAGCCTCGAACACCAAGGCCACCCTCCACCT...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAACCTGTGGCATTGCATTaGGATGCCAGTAAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEPVALH*DASKVH
Trigger: GTGGACCTTACTGGCATCCAAATGCAATGCCACAGG...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTACCCATTCCCGGTGGTaGTGTCCCTGGACCCCCACG +
Preference number: 5 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTTHSRW*CPWTPT
Trigger: CGTGGGGGTCCAGGGACACAACCACCGGGAATGGGT...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGCAGGATCTCCGAGGTTaGCTGCGAGGGGCTACCCAG +
Preference number: 5 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVQDLRG*LRGATQ
Trigger: CTGGGTAGCCCCTCGCAGCAAACCTCGGAGATCCTG...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS GCA 90 bp AGAAGGGTTTCTTTGAGCCTGGCATCCTGCTGTAAGTCTGGGTATTaGATGCCAGGAGGGTGCACGTGCAGTTCCTTTAATTTGGGCACT +
Preference number: 5 (lower is better)
Translates to: RRVSLSLASCCKSGY*MPGGCTCSSFNLGT
Trigger: AGTGCCCAAATTAAAGGAACTGCACGTGCACCCTCCTGGCATGCAATACCCAGACTTACAGCAGGATGCCAGGCTCAAAGAAACCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 90 bp GATGTGCAAATTACAGGTACACCCAGTGGGGCATATAATGGGGATTaGTGGTCTGGTCTGATAAGGAGCAATGGGAGGCTGGTTTGGACC +
Preference number: 5 (lower is better)
Translates to: DVQITGTPSGAYNGD*WSGLIRSNGRLVWT
Trigger: GGTCCAAACCAGCCTCCCATTGCTCCTTATCAGACCAGACCACCAATCCCCATTATATGCCCCACTGGGTGTACCTGTAATTTGCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 90 bp CCTTCTCTTTTTCCAGCAAGGTCCGGTAGTTACTATGGTTCTCCTTaGGTGTCTCAGCAAACTGCTCACTTCCTAGGAGAGCCTCACCCA +
Preference number: 5 (lower is better)
Translates to: PSLFPARSGSYYGSP*VSQQTAHFLGEPHP
Trigger: TGGGTGAGGCTCTCCTAGGAAGTGAGCAGTTTGCTGAGACACCCAAGGAGAACCATAGTAACTACCGGACCTTGCTGGAAAAAGAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAACACCTTCCTGCCGCTaGCTTCTGAAGGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGTPSCR*LLKGSF
Trigger: GAAGCTGCCCTTCAGAAGCAAGCGGCAGGAAGGTGT...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAGGGGTTGTTGCACATTaGGGTAACCGGGTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGGVVAH*GNRVGD
Trigger: ATCCCCCACCCGGTTACCCAAATGTGCAACAACCCC...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGAAGCGATACCGTaGGCAGAGAGTGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVGEAIP*AESESS
Trigger: AGAGGACTCACTCTCTGCCAACGGTATCGCTTCACC...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS TCA 90 bp CCTCTACCTCAGAGTCAGACAACAAGGGACAGAGTTCTGTCTTCCTaGTTTCTCGTAGGTCCTTTCCATGGAAGTGGAAAGGGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: PLPQSQTTRDRVLSS*FLVGPFHGSGKGSH
Trigger: GTGAGACCCCTTTCCACTTCCATGGAAAGGACCTACGAGAAATCAGGAAGACAGAACTCTGTCCCTTGTTGTCTGACTCTGAGGTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTATGTCCTGCAATGCATaGTTCCCAAGATTAATAGAC +
Preference number: 5 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTMSCNA*FPRLID
Trigger: GTCTATTAATCTTGGGAACAATGCATTGCAGGACAT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGGTGCTCATCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTATGCATTCTCCTTACTaGATGACGAATGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: GCSSLGVCLRLLNHQASTMHSPY*MTNVEF
Trigger: GAATTCCACATTCGTCATCAAGTAAGGAGAATGCAT...AGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGATGAGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATCCTCGCTCTTTGCAGTaGACAGTCAAGCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: RKDREDGVTGTSVKGARDPRSLQ*TVKPRS
Trigger: TGACCTTGGCTTGACTGTCAACTGCAAAGAGCGAGG...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATCTGGAGAGGAAAGAGTaGGTCGACCACCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: SAKALSLINDLSMALPPNLERKE*VDHHPH
Trigger: GTGGGGGTGGTGGTCGACCAACTCTTTCCTCTCCAG...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTGGGGTTGTTGCACATTaGGGTAACCGGGTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFGVVAH*GNRVGD
Trigger: ATCCCCCACCCGGTTACCCAAATGTGCAACAACCCC...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGTGGCATTGCATTaGGATGCCAGTAAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCPVALH*DASKVH
Trigger: GTGGACCTTACTGGCATCCAAATGCAATGCCACAGG...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATAAGAGAAGGGTTTCTTaGAGCCTGGCATCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RKDREDGVTGTSVKGARDKRRVS*SLASCC
Trigger: ACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCTT...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTGTTAGAACCTGTATGTaGTCTTCTCCAGGACTTCGA +
Preference number: 5 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGVRTCM*SSPGLR
Trigger: TCGAAGTCCTGGAGAAGACAACATACAGGTTCTAAC...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTACAGCCTTAAATAAATaGGTTGGAAGCATGGGGATG +
Preference number: 5 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGTALNK*VGSMGM
Trigger: CATCCCCATGCTTCCAACCAATTTATTTAAGGCTGT...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCCCTAGGCGTGTGTCTTCGGCTGTTAAACCACCAGGCCTCTACTTCAGTAGAAGTCAAGCCAAGGTCATaGATGTGCAAATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: SLGVCLRLLNHQASTSVEVKPRS*MCKLQV
Trigger: TACCTGTAATTTGCACATCAATGACCTTGGCTTGAC...TTCTACTGAAGTAGAGGCCTGGTGGTTTAACAGCCGAAGACACACGCCTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTACCTGCACCAGCAGGAAGAAACTGCAGGTTTAGGGACCATGGTGTCAAGCCAAGGTCATaGATGTGCAAATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: CVCVPAPAGRNCRFRDHGVKPRS*MCKLQV
Trigger: TACCTGTAATTTGCACATCAATGACCTTGGCTTGAC...ACCATGGTCCCTAAACCTGCAGTTTCTTCCTGCTGGTGCAGGTACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTCCTCGCTCTTTGCAGTaGACAGTCAAGCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFPRSLQ*TVKPRS
Trigger: TGACCTTGGCTTGACTGTCAACTGCAAAGAGCGAGG...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GGTAGGAGAGATGCTGTGAGCTGTACACTAGCAGTGAAGGGTGGTAGAACTATGTGGCATTCAAGGGCCTaGGAAGAAGTTCAGAAATGT +
Preference number: 5 (lower is better)
Translates to: GRRDAVSCTLAVKGGRTMWHSRA*EEVQKC
Trigger: ACATTTCTGAACTTCTTCCAAGGCCCTTGAATGCCA...CATAGTTCTACCACCCTTCACTGCTAGTGTACAGCTCACAGCATCTCTCCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGCAGCAAAGGCGTCTGTaGGCAGAGTCCTCAGTAAGT +
Preference number: 5 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVQQRRL*AESSVS
Trigger: ACTTACTGAGGACTCTGCCAACAGACGCCTTTGCTG...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 90 bp AATCCTCGCTCTTTGCAGTTGACAGTCAAGCCAAGGTCATTGATGTaGAAATTACAGGTACACCCAGTGGGGCATATAATGGGGATTGGT +
Preference number: 5 (lower is better)
Translates to: NPRSLQLTVKPRSLM*KLQVHPVGHIMGIG
Trigger: ACCAATCCCCATTATATGCCCCACTGGGTGTACCTGTAATTTGCACATCAATGACCTTGGCTTGACTGTCAACTGCAAAGAGCGAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGACTCAGATACAGTTTCTaGGCATTCAAGGGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGLRYSF*AFKGLG
Trigger: TCCAAGGCCCTTGAATGCCAAGAAACTGTATCTGAG...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTCAGCAAAGGCGTCTGTaGGCAGAGTCCTCAGTAAGT +
Preference number: 5 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTQQRRL*AESSVS
Trigger: ACTTACTGAGGACTCTGCCAACAGACGCCTTTGCTG...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTACACCTTCCTGCCGCTaGCTTCTGAAGGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: NICWQKSAKALSLINDLSTPSCR*LLKGSF
Trigger: GAAGCTGCCCTTCAGAAGCAAGCGGCAGGAAGGTGT...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAATTCCACTTGGATTaGGGAGATCTCAGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: WKWYGVCVCVCVCVCVCVKFHLD*GDLRQS
Trigger: GCTTTGCCTGAGATCTCCCAAATCCAAGTGGAATTT...CACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS TCA 90 bp TGGCCTTGGTGTTCGAGGCTGTTTGGTGGGCTTAGGCTGTTTATTTaGGGACTTGTATTCGACAGAAGAAGCAGTAAAATGAACAGAGGA +
Preference number: 5 (lower is better)
Translates to: WPWCSRLFGGLRLFI*GLVFDRRSSKMNRG
Trigger: TCCTCTGTTCATTTTACTGCTTCTTCTGTCGAATACAAGTCCTCAAATAAACAGCCTAAGCCCACCAAACAGCCTCGAACACCAAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATACAGCCTTAAATAAATaGGTTGGAAGCATGGGGATG +
Preference number: 5 (lower is better)
Translates to: RKDREDGVTGTSVKGARDTALNK*VGSMGM
Trigger: CATCCCCATGCTTCCAACCAATTTATTTAAGGCTGT...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGGGTGTTCGAGGCTGTTaGGTGGGCTTAGGCTGTTTA +
Preference number: 5 (lower is better)
Translates to: RTMERRKMDQTRTKQIELGVRGC*VGLGCL
Trigger: TAAACAGCCTAAGCCCACCAAACAGCCTCGAACACC...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTCAATGGGAGGCTGGTTaGGACCAGGATATAAAGCTT +
Preference number: 5 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFQWEAG*DQDIKL
Trigger: AAGCTTTATATCCTGGTCCAAACCAGCCTCCCATTG...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAAGCTTCTCTATATCGTaGCCATTAAGGAAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGSFSIS*PLRKRL
Trigger: GAGCCTCTTCCTTAATGGCAACGATATAGAGAAGCT...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCCAAGGATTCTCATaGAGGTCTATCTGGACAATG +
Preference number: 5 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCSQGFS*RSIWTM
Trigger: CATTGTCCAGATAGACCTCAATGAGAATCCTTGGGA...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATGAGGTAATCACTTTTTaGGGTTTGGTGGTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: RKDREDGVTGTSVKGARDEVITF*GLVVCE
Trigger: TTCACAGACCACCAAACCCAAAAAAGTGATTACCTC...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATCATGCGGTTTTAGTTTaGTTCAGGGTAGGAAAGATC +
Preference number: 5 (lower is better)
Translates to: RKDREDGVTGTSVKGARDHAVLV*FRVGKI
Trigger: GATCTTTCCTACCCTGAACAAAACTAAAACCGCATG...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGAAAGATCGTGAGGATGGAGTTACTGGGACAAGTGTAAAGGGAGCAAGGGATTCCATCCTAGAGCAATaGTGCTTAGAAGAATTATCC +
Preference number: 5 (lower is better)
Translates to: RKDREDGVTGTSVKGARDSILEQ*CLEELS
Trigger: GGATAATTCTTCTAAGCACAATTGCTCTAGGATGGA...ATCCCTTGCTCCCTTTACACTTGTCCCAGTAACTCCATCCTCACGATCTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTGGTGTTCGAGGCTGTTaGGTGGGCTTAGGCTGTTTA +
Preference number: 5 (lower is better)
Translates to: NICWQKSAKALSLINDLSGVRGC*VGLGCL
Trigger: TAAACAGCCTAAGCCCACCAAACAGCCTCGAACACC...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATCAATGGGAGGCTGGTTaGGACCAGGATATAAAGCTT +
Preference number: 5 (lower is better)
Translates to: SAKALSLINDLSMALPPNQWEAG*DQDIKL
Trigger: AAGCTTTATATCCTGGTCCAAACCAGCCTCCCATTG...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGTTAAATCCTCGCTCTTaGCAGTTGACAGTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVLNPRS*QLTVKP
Trigger: TGGCTTGACTGTCAACTGCAAAGAGCGAGGATTTAA...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAAAGGCCCCATCTaGGACATAGGAAATACGATT +
Preference number: 5 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCDKGPI*DIGNTI
Trigger: AATCGTATTTCCTATGTCCAAGATGGGGCCTTTATC...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTTTTAAGTTGGGCAAGTaGATAAAGGCCCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFFKLGK*IKAPSW
Trigger: CCAAGATGGGGCCTTTATCAACTTGCCCAACTTAAA...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTAAGAGGCTCTTTAAGTaGGGCAAGTTGATAAAGGCC +
Preference number: 5 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFKRLFK*GKLIKA
Trigger: GGCCTTTATCAACTTGCCCAACTTAAAGAGCCTCTT...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATAAACAGCCTGTGGCATaGCATTTGGATGCCAGTAAG +
Preference number: 5 (lower is better)
Translates to: SAKALSLINDLSMALPPNKQPVA*HLDASK
Trigger: CTTACTGGCATCCAAATGCAATGCCACAGGCTGTTT...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGTAATCACTTTTTaGGGTTTGGTGGTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCEVITF*GLVVCE
Trigger: TTCACAGACCACCAAACCCAAAAAAGTGATTACCTC...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCATGCGGTTTTAGTTTaGTTCAGGGTAGGAAAGATC +
Preference number: 5 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCHAVLV*FRVGKI
Trigger: GATCTTTCCTACCCTGAACAAAACTAAAACCGCATG...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 90 bp GAAGAATTATCCACAACATCCTTCCTCTGTGAAGCATCTCAGCTATaGAAGGTTTCATCGTTCGTGGTTGATTACAAAACTGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: EELSTTSFLCEASQL*KVSSFVVDYKTGSS
Trigger: AGAGCTGCCAGTTTTGTAATCAACCACGAACGATGAAACCTTCCATAGCTGAGATGCTTCACAGAGGAAGGATGTTGTGGATAATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497724.1
CDS-3UTR CAA 90 bp GCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGGGAATGTCCTGCAATGCATaGTTCCCAAGATTAATAGAC +
Preference number: 5 (lower is better)
Translates to: AVLVLFRVGKIVRMELLGMSCNA*FPRLID
Trigger: GTCTATTAATCTTGGGAACAATGCATTGCAGGACAT...TCCCAGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp ATGGAAATGGTATGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATTCTCCTTACTaGATGACGAATGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: MEMVWSVCVCVCVCVCVCMHSPY*MTNVEF
Trigger: GAATTCCACATTCGTCATCAAGTAAGGAGAATGCAT...ACACACACACACACACACACACACACACACACACACACTCCATACCATTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGGTTTAGGGACCATGGTCTGCAGATGGATATGTGTATGAGAGACAAGATAGTGGATAAAGGCCCCATCTaGGACATAGGAAATACGATT +
Preference number: 5 (lower is better)
Translates to: RFRDHGLQMDMCMRDKIVDKGPI*DIGNTI
Trigger: AATCGTATTTCCTATGTCCAAGATGGGGCCTTTATC...CACTATCTTGTCTCTCATACACATATCCATCTGCAGACCATGGTCCCTAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATAAGAGGCTCTTTAAGTaGGGCAAGTTGATAAAGGCC +
Preference number: 5 (lower is better)
Translates to: SAKALSLINDLSMALPPNKRLFK*GKLIKA
Trigger: GGCCTTTATCAACTTGCCCAACTTAAAGAGCCTCTT...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATAGCTTCTCTATATCGTaGCCATTAAGGAAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: SAKALSLINDLSMALPPNSFSIS*PLRKRL
Trigger: GAGCCTCTTCCTTAATGGCAACGATATAGAGAAGCT...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTAATAGCAGCTTCAAGTaGGGCATGAGGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: NICWQKSAKALSLINDLSNSSFK*GMRLKA
Trigger: AGCCTTCAGCCTCATGCCCAACTTGAAGCTGCTATT...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCATGCGGTTTTAGTTTTGTTCAGGGTAGGAAAGATCGTGAGGATGGAGTTACTGTTAGAACCTGTATGTaGTCTTCTCCAGGACTTCGA +
Preference number: 5 (lower is better)
Translates to: SCGFSFVQGRKDREDGVTVRTCM*SSPGLR
Trigger: TCGAAGTCCTGGAGAAGACAACATACAGGTTCTAAC...AGTAACTCCATCCTCACGATCTTTCCTACCCTGAACAAAACTAAAACCGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATCTCTGCGAAGCTGAATaGTATCCATCATACTGTAGC +
Preference number: 5 (lower is better)
Translates to: SAKALSLINDLSMALPPNLCEAE*YPSYCS
Trigger: GCTACAGTATGATGGATACAATTCAGCTTCGCAGAG...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CCA 90 bp GAAGAATTATCCACAACATCCTTCCTCTGTGAAGCATCTCAGCTATaGAAGGTTTCATCGTTCGTGGTTGATTACAAAACAACGTCTCCT +
Preference number: 5 (lower is better)
Translates to: EELSTTSFLCEASQL*KVSSFVVDYKTTSP
Trigger: AGGAGACGTTGTTTTGTAATCAACCACGAACGATGAAACCTTCCATAGCTGAGATGCTTCACAGAGGAAGGATGTTGTGGATAATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS CCA 90 bp GAAGAATTATCCACAACATCCTTCCTCTGTGAAGCATCTCAGCTATaGAAGGTTTCATCGTTCGTGGTTGATTACAAAACTATGGTGCAG +
Preference number: 5 (lower is better)
Translates to: EELSTTSFLCEASQL*KVSSFVVDYKTMVQ
Trigger: CTGCACCATAGTTTTGTAATCAACCACGAACGATGAAACCTTCCATAGCTGAGATGCTTCACAGAGGAAGGATGTTGTGGATAATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CAA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTTTTCATCGTTCGTGGTaGATTACAAAACAACGTCTC +
Preference number: 5 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFFHRSW*ITKQRL
Trigger: GAGACGTTGTTTTGTAATCAACCACGAACGATGAAA...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS-3UTR CAA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTTCCATCCTAGAGCAATaGTGCTTAGAAGAATTATCC +
Preference number: 5 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFSILEQ*CLEELS
Trigger: GGATAATTCTTCTAAGCACAATTGCTCTAGGATGGA...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGTGGCATTCAAGGGCCTaGGAAGAAGTTCAGAAATGT +
Preference number: 5 (lower is better)
Translates to: RTMERRKMDQTRTKQIELWHSRA*EEVQKC
Trigger: ACATTTCTGAACTTCTTCCAAGGCCCTTGAATGCCA...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATCTCAGATACAGTTTCTaGGCATTCAAGGGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: TMERRKMDQTRTKQIELNLRYSF*AFKGLG
Trigger: TCCAAGGCCCTTGAATGCCAAGAAACTGTATCTGAG...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AGAACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGTCCCAAGGATTCTCATaGAGGTCTATCTGGACAATG +
Preference number: 5 (lower is better)
Translates to: RTMERRKMDQTRTKQIELSQGFS*RSIWTM
Trigger: CATTGTCCAGATAGACCTCAATGAGAATCCTTGGGA...CAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTTTACTATGGTTCTCCTaGGGTGTCTCAGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: NICWQKSAKALSLINDLSLLWFS*GVSANC
Trigger: GCAGTTTGCTGAGACACCCAAGGAGAACCATAGTAA...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCGCATCTGAGAGGGGAGAGCATACATCTGTATTCTCTAGTTATCATGCGGTTTGCGAAGGCACTTTCATaGATTAATGATCTGAGTATG +
Preference number: 5 (lower is better)
Translates to: SHLRGESIHLYSLVIMRFAKALS*INDLSM
Trigger: CATACTCAGATCATTAATCAATGAAAGTGCCTTCGC...AAACCGCATGATAACTAGAGAATACAGATGTATGCTCTCCCCTCTCAGATGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTTTAAATCCTCGCTCTTaGCAGTTGACAGTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: NICWQKSAKALSLINDLSLNPRS*QLTVKP
Trigger: TGGCTTGACTGTCAACTGCAAAGAGCGAGGATTTAA...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATTTTAAGTTGGGCAAGTaGATAAAGGCCCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: TMERRKMDQTRTKQIELNFKLGK*IKAPSW
Trigger: CCAAGATGGGGCCTTTATCAACTTGCCCAACTTAAA...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATGCGAAGGCACTTTCATaGATTAATGATCTGAGTATG +
Preference number: 5 (lower is better)
Translates to: SAKALSLINDLSMALPPNAKALS*INDLSM
Trigger: CATACTCAGATCATTAATCAATGAAAGTGCCTTCGC...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCCAAATTTTCATCGTTCGTGGTaGATTACAAAACTATGGTGC +
Preference number: 5 (lower is better)
Translates to: SAKALSLINDLSMALPPNFHRSW*ITKLWC
Trigger: GCACCATAGTTTTGTAATCAACCACGAACGATGAAA...ATTTGGAGGAAGGGCCATACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS-3UTR CAA 90 bp ACTATGGAGAGGAGAAAAATGGATCAAACCCGAACTAAGCAGATTGAGTTGAATTGTTTATTTGAGGACTaGTATTCGACAGAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: TMERRKMDQTRTKQIELNCLFED*YSTEEA
Trigger: TGCTTCTTCTGTCGAATACAAGTCCTCAAATAAACA...ATTCAACTCAATCTGCTTAGTTCGGGTTTGATCCATTTTTCTCCTCTCCATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS-3UTR CAA 90 bp AACATTTGCTGGCAAAAGTCTGCGAAGGCACTTTCATTGATTAATGATCTGAGTTGTTTATTTGAGGACTaGTATTCGACAGAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: NICWQKSAKALSLINDLSCLFED*YSTEEA
Trigger: TGCTTCTTCTGTCGAATACAAGTCCTCAAATAAACA...ACTCAGATCATTAATCAATGAAAGTGCCTTCGCAGACTTTTGCCAGCAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS TCA 90 bp AGATATAGTCTCTTTAAAATCTTAAGACCATTGAAAGCTCCAGTCTaGATGTCCTGCAATGCATTGTTCCCAAGATTAATAGACACAGCA +
Preference number: 5 (lower is better)
Translates to: RYSLFKILRPLKAPV*MSCNALFPRLIDTA
Trigger: TGCTGTGTCTATTAATCTTGGGAACAATGCATTGCAGGACATTCAGACTGGAGCTTTCAATGGTCTTAAGATTTTAAAGAGACTATATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241274.3
ENST00000475390.2
ENST00000497724.1
CDS GCA 72 bp CCAATGGGAGAGCGGGGCGCGCACCTAGCGCGGCGATaGCAGCGACAGGGAGCTCACGACCACAGCTCCCTA +
Preference number: 6 (lower is better)
Translates to: PMGERGAHLARR*QRQGAHDHSSL
Trigger: TAGGGAGCTGTGGTCGTGAGCTCCCTGTCGCTGGCATCGCCGCGCTAGGTGCGCGCCCCGCTCTCCCATTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CAA 90 bp CATACACATGACCCACGGGAGGGGCCTTCTCTGGAGAGGAAAGAGTaGGTCGACCACCACCCCCACTTCCGCCACCACCACCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: HTHDPREGPSLERKE*VDHHPHFRHHHLHH
Trigger: ATGGTGGAGGTGGTGGTGGCGGAAGTGGGGGTGGTGGTCGACCAACTCTTTCCTCTCCAGAGAAGGCCCCTCCCGTGGGTCATGTGTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp CTATGGTGCAGAGCGCTCAGGATCTCCGAGGTTTGCTaGGAGGGGCTACCCAGCAGGAGGGGCAAACTCTCT +
Preference number: 6 (lower is better)
Translates to: LWCRALRISEVC*EGLPSRRGKLS
Trigger: AGAGAGTTTGCCCCTCCTGCTGGGTAGCCCCTCGCAGCAAACCTCGGAGATCCTGAGCGCTCTGCACCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS GCA 72 bp AAACTATGGTGCAGAGCGCTCAGGATCTCCGAGGTTTaGTGCGAGGGGCTACCCAGCAGGAGGGGCAAACTC +
Preference number: 6 (lower is better)
Translates to: KLWCRALRISEV*CEGLPSRRGKL
Trigger: GAGTTTGCCCCTCCTGCTGGGTAGCCCCTCGCAGCAAACCTCGGAGATCCTGAGCGCTCTGCACCATAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CCA 72 bp GTACTCATACACATGACCCACGGGAGGGGCCTTCTCTaGAGAGGAAAGAGTTGGTCGACCACCACCCCCACT +
Preference number: 6 (lower is better)
Translates to: VLIHMTHGRGLL*RGKSWSTTTPT
Trigger: AGTGGGGGTGGTGGTCGACCAACTCTTTCCTCTCCAGAGAAGGCCCCTCCCGTGGGTCATGTGTATGAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp AGAATCTCCAGGCTGGGCTGGGGATTCTCCAGCTGGTaGAACGTGCAGCATCTCTGGGCAAAGAACTTCCAG +
Preference number: 6 (lower is better)
Translates to: RISRLGWGFSSW*NVQHLWAKNFQ
Trigger: CTGGAAGTTCTTTGCCCAGAGATGCTGCACGTTGCACCAGCTGGAGAATCCCCAGCCCAGCCTGGAGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 72 bp GAGGCTGGTTTGGACCAGGATATAAAGCTTGGGAGGTaGAGGGTGGCCTTGGTGTTCGAGGCTGTTTGGTGG +
Preference number: 6 (lower is better)
Translates to: EAGLDQDIKLGR*RVALVFEAVWW
Trigger: CCACCAAACAGCCTCGAACACCAAGGCCACCCTCCACCTCCCAAGCTTTATATCCTGGTCCAAACCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 72 bp GCAATGGGAGGCTGGTTTGGACCAGGATATAAAGCTTaGGAGGTGGAGGGTGGCCTTGGTGTTCGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: AMGGWFGPGYKA*EVEGGLGVRGC
Trigger: ACAGCCTCGAACACCAAGGCCACCCTCCACCTCCCAAGCTTTATATCCTGGTCCAAACCAGCCTCCCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 72 bp GTGAGAATCTCCAGGCTGGGCTGGGGATTCTCCAGCTaGTGCAACGTGCAGCATCTCTGGGCAAAGAACTTC +
Preference number: 6 (lower is better)
Translates to: VRISRLGWGFSS*CNVQHLWAKNF
Trigger: GAAGTTCTTTGCCCAGAGATGCTGCACGTTGCACCAGCTGGAGAATCCCCAGCCCAGCCTGGAGATTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 90 bp TGGGGATTGGTGGTCTGGTCTGATAAGGAGCAATGGGAGGCTGGTTaGGACCAGGATATAAAGCTTGGGAGGTGGAGGGTGGCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: WGLVVWSDKEQWEAG*DQDIKLGRWRVALV
Trigger: CACCAAGGCCACCCTCCACCTCCCAAGCTTTATATCCTGGTCCAAACCAGCCTCCCATTGCTCCTTATCAGACCAGACCACCAATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp CCACCACCTCCACCATCCTCAAACAGCCTGTGGCATTaGATTTGGATGCCAGTAAGGTCCACACCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: PPPPPSSNSLWH*IWMPVRSTPSC
Trigger: GCAGGAAGGTGTGGACCTTACTGGCATCCAAATGCAATGCCACAGGCTGTTTGAGGATGGTGGAGGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp GCCGAGAAGAGAAGGGTTTCTTTGAGCCTGGCATCCTaGTGTAAGTCTGGGTATTGCATGCCAGGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: AEKRRVSLSLAS*CKSGYCMPGGC
Trigger: GCACCCTCCTGGCATGCAATACCCAGACTTACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCTTCTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 72 bp ATTTGGATGCCAGTAAGGTCCACACCTTCCTGCCGCTaGCTTCTGAAGGGCAGCTTCTTTCGACGCCTTCGG +
Preference number: 6 (lower is better)
Translates to: IWMPVRSTPSCR*LLKGSFFRRLR
Trigger: CCGAAGGCGTCGAAAGAAGCTGCCCTTCAGAAGCAAGCGGCAGGAAGGTGTGGACCTTACTGGCATCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 90 bp CGAGGGGCTACCCAGCAGGAGGGGCAAACTCTCTGCGAAGCTGAATaGTATCCATCATACTGTAGCCTTGTAGCTTCTCCTCTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: RGATQQEGQTLCEAE*YPSYCSLVASPLLA
Trigger: GGCCAGAAGAGGAGAAGCTACAAGGCTACAGTATGATGGATACAATTCAGCTTCGCAGAGAGTTTGCCCCTCCTGCTGGGTAGCCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS GCA 72 bp GGAGTCAATATAGGAAACGCAGGGCTGGAACCTGAATaGAAATCCATCAGCCGCCCCCAAATCGCGCACCAA +
Preference number: 6 (lower is better)
Translates to: GVNIGNAGLEPE*KSISRPQIAHQ
Trigger: TTGGTGCGCGATTTGGGGGCGGCTGATGGATTTGCATTCAGGTTCCAGCCCTGCGTTTCCTATATTGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS GCA 72 bp CATTGCATTTGGATGCCAGTAAGGTCCACACCTTCCTaGCGCTTGCTTCTGAAGGGCAGCTTCTTTCGACGC +
Preference number: 6 (lower is better)
Translates to: HCIWMPVRSTPS*RLLLKGSFFRR
Trigger: GCGTCGAAAGAAGCTGCCCTTCAGAAGCAAGCGGCAGGAAGGTGTGGACCTTACTGGCATCCAAATGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp CTGCGAGGGGCTACCCAGCAGGAGGGGCAAACTCTCTaGGAAGCTGAATTGTATCCATCATACTGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: LRGATQQEGQTL*EAELYPSYCSL
Trigger: AAGGCTACAGTATGATGGATACAATTCAGCTTCGCAGAGAGTTTGCCCCTCCTGCTGGGTAGCCCCTCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CAA 72 bp GTGGTCTGGTCTGATAAGGAGCAATGGGAGGCTGGTTaGGACCAGGATATAAAGCTTGGGAGGTGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: VVWSDKEQWEAG*DQDIKLGRWRV
Trigger: CACCCTCCACCTCCCAAGCTTTATATCCTGGTCCAAACCAGCCTCCCATTGCTCCTTATCAGACCAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 72 bp ACCTCCACCATCCTCAAACAGCCTGTGGCATTGCATTaGGATGCCAGTAAGGTCCACACCTTCCTGCCGCTT +
Preference number: 6 (lower is better)
Translates to: TSTILKQPVALH*DASKVHTFLPL
Trigger: AAGCGGCAGGAAGGTGTGGACCTTACTGGCATCCAAATGCAATGCCACAGGCTGTTTGAGGATGGTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 90 bp TGGTGGTCTGTGAAGCCCTTTCCAGCCGAGAAGAGAAGGGTTTCTTaGAGCCTGGCATCCTGCTGTAAGTCTGGGTATTGCATGCCAGGA +
Preference number: 6 (lower is better)
Translates to: WWSVKPFPAEKRRVS*SLASCCKSGYCMPG
Trigger: TCCTGGCATGCAATACCCAGACTTACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCTTCTCGGCTGGAAAGGGCTTCACAGACCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp CAAAGAACTTCCAGCTCAATAGTGCGCACATCACGGTaGGTGAGGTTCTCAGGGCTCCTGCAAAGCACATCA +
Preference number: 6 (lower is better)
Translates to: QRTSSSIVRTSR*VRFSGLLQSTS
Trigger: TGATGTGCTTTGCAGGAGCCCTGAGAACCTCACGCACCGTGATGTGCGCACTATTGAGCTGGAAGTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 72 bp ACAGGTACACCCAGTGGGGCATATAATGGGGATTGGTaGTCTGGTCTGATAAGGAGCAATGGGAGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: TGTPSGAYNGDW*SGLIRSNGRLV
Trigger: AACCAGCCTCCCATTGCTCCTTATCAGACCAGACCACCAATCCCCATTATATGCCCCACTGGGTGTACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 72 bp TGGGAGGTGGAGGGTGGCCTTGGTGTTCGAGGCTGTTaGGTGGGCTTAGGCTGTTTATTTGAGGACTTGTAT +
Preference number: 6 (lower is better)
Translates to: WEVEGGLGVRGC*VGLGCLFEDLY
Trigger: ATACAAGTCCTCAAATAAACAGCCTAAGCCCACCAAACAGCCTCGAACACCAAGGCCACCCTCCACCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 72 bp GTGAAGCCCTTTCCAGCCGAGAAGAGAAGGGTTTCTTaGAGCCTGGCATCCTGCTGTAAGTCTGGGTATTGC +
Preference number: 6 (lower is better)
Translates to: VKPFPAEKRRVS*SLASCCKSGYC
Trigger: GCAATACCCAGACTTACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCTTCTCGGCTGGAAAGGGCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS TCA 72 bp ATAAGGAGTCAATATAGGAAACGCAGGGCTGGAACCTaGATGCAAATCCATCAGCCGCCCCCAAATCGCGCA +
Preference number: 6 (lower is better)
Translates to: IRSQYRKRRAGT*MQIHQPPPNRA
Trigger: TGCGCGATTTGGGGGCGGCTGATGGATTTGCATTCAGGTTCCAGCCCTGCGTTTCCTATATTGACTCCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS TCA 72 bp AGGGCTCCTGCAAAGCACATCACCAACCACACTGACTaGGCTGATGGTTTCGATCCACTGTTTAAAGGGGAC +
Preference number: 6 (lower is better)
Translates to: RAPAKHITNHTD*ADGFDPLFKGD
Trigger: GTCCCCTTTAAACAGTGGATCGAAACCATCAGCTCAGTCAGTGTGGTTGGTGATGTGCTTTGCAGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp TCCTGCTGTAAGTCTGGGTATTGCATGCCAGGAGGGTaGACGTGCAGTTCCTTTAATTTGGGCACTGTTCCA +
Preference number: 6 (lower is better)
Translates to: SCCKSGYCMPGG*TCSSFNLGTVP
Trigger: TGGAACAGTGCCCAAATTAAAGGAACTGCACGTGCACCCTCCTGGCATGCAATACCCAGACTTACAGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp AAGATGGAATTAGCCCTTGCTTTTCCAGGGTGTCTTTaGTCTTTGCCCTTTAGGTGGGTGGGAGTGGGGGTT +
Preference number: 6 (lower is better)
Translates to: KMELALAFPGCL*SLPFRWVGVGV
Trigger: AACCCCCACTCCCACCCACCTAAAGGGCAAAGAGCAAAGACACCCTGGAAAAGCAAGGGCTAATTCCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CCA 72 bp GTCTTCCTGATTTCTCGTAGGTCCTTTCCATGGAAGTaGAAAGGGGTCTCACAGGTAATGTCTCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: VFLISRRSFPWK*KGVSQVMSPTR
Trigger: CCTGGTGGGAGACATTACCTGTGAGACCCCTTTCCACTTCCATGGAAAGGACCTACGAGAAATCAGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 72 bp ATTACAGGTACACCCAGTGGGGCATATAATGGGGATTaGTGGTCTGGTCTGATAAGGAGCAATGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: ITGTPSGAYNGD*WSGLIRSNGRL
Trigger: CAGCCTCCCATTGCTCCTTATCAGACCAGACCACCAATCCCCATTATATGCCCCACTGGGTGTACCTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 90 bp GTGCCAGCAAAGGCGTCTGTTGGCAGAGTCCTCAGTAAGTTATTATaGAGGAATAGCAGCTTCAAGTTGGGCATGAGGCTGAAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: VPAKASVGRVLSKLL*RNSSFKLGMRLKAA
Trigger: TGCAGCCTTCAGCCTCATGCCCAACTTGAAGCTGCTATTCCTCAATAATAACTTACTGAGGACTCTGCCAACAGACGCCTTTGCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp GTCCCAGGACTAGGTTCCTTTGATTTAAAATCTCGGTaGTCTGGATCAGTGGAGAGCTTCGTTGTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: VPGLGSFDLKSR*SGSVESFVVPE
Trigger: CTCGGGAACAACGAAGCTCTCCACTGATCCAGAGCACCGAGATTTTAAATCAAAGGAACCTAGTCCTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CCA 72 bp AGCTTCAAGTTGGGCATGAGGCTGAAGGCTGCAGGCTaGATTTCCCGGATGACATTGAACTCAAAGTACAAG +
Preference number: 6 (lower is better)
Translates to: SFKLGMRLKAAG*ISRMTLNSKYK
Trigger: CTTGTACTTTGAGTTCAATGTCATCCGGGAAATCCAGCCTGCAGCCTTCAGCCTCATGCCCAACTTGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 72 bp TTTCCAGCAAGGTCCGGTAGTTACTATGGTTCTCCTTaGGTGTCTCAGCAAACTGCTCACTTCCTAGGAGAG +
Preference number: 6 (lower is better)
Translates to: FPARSGSYYGSP*VSQQTAHFLGE
Trigger: CTCTCCTAGGAAGTGAGCAGTTTGCTGAGACACCCAAGGAGAACCATAGTAACTACCGGACCTTGCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 72 bp CCTCGCTCTTTGCAGTTGACAGTCAAGCCAAGGTCATaGATGTGCAAATTACAGGTACACCCAGTGGGGCAT +
Preference number: 6 (lower is better)
Translates to: PRSLQLTVKPRS*MCKLQVHPVGH
Trigger: ATGCCCCACTGGGTGTACCTGTAATTTGCACATCAATGACCTTGGCTTGACTGTCAACTGCAAAGAGCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 72 bp CAAAACTGGCAGCTCTTCAAGAGACACCCTGTGAAATaGAGTGTCGGGAAGTCAGCATTCTGTACCCGTGGA +
Preference number: 6 (lower is better)
Translates to: QNWQLFKRHPVK*SVGKSAFCTRG
Trigger: TCCACGGGTACAGAATGCTGACTTCCCGACACTCAATTTCACAGGGTGTCTCTTGAAGAGCTGCCAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497724.1
CDS CAA 90 bp TATAAAGCTTGGGAGGTGGAGGGTGGCCTTGGTGTTCGAGGCTGTTaGGTGGGCTTAGGCTGTTTATTTGAGGACTTGTATTCGACAGAA +
Preference number: 6 (lower is better)
Translates to: YKAWEVEGGLGVRGC*VGLGCLFEDLYSTE
Trigger: TTCTGTCGAATACAAGTCCTCAAATAAACAGCCTAAGCCCACCAAACAGCCTCGAACACCAAGGCCACCCTCCACCTCCCAAGCTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 72 bp CCTCGGAACATGCCTGGTGTCAGCTTCTCTATATCGTaGCCATTAAGGAAGAGGCTCTTTAAGTTGGGCAAG +
Preference number: 6 (lower is better)
Translates to: PRNMPGVSFSIS*PLRKRLFKLGK
Trigger: CTTGCCCAACTTAAAGAGCCTCTTCCTTAATGGCAACGATATAGAGAAGCTGACACCAGGCATGTTCCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 90 bp CTCTGTAGGCCTCGGAACATGCCTGGTGTCAGCTTCTCTATATCGTaGCCATTAAGGAAGAGGCTCTTTAAGTTGGGCAAGTTGATAAAG +
Preference number: 6 (lower is better)
Translates to: LCRPRNMPGVSFSIS*PLRKRLFKLGKLIK
Trigger: CTTTATCAACTTGCCCAACTTAAAGAGCCTCTTCCTTAATGGCAACGATATAGAGAAGCTGACACCAGGCATGTTCCGAGGCCTACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 90 bp ATACAAATACACAGTATGGCTGTGCACACCAAATTCCACTTGGATTaGGGAGATCTCAGGCAAAGCACGAAGGTGAAGCGATACCGTTGG +
Preference number: 6 (lower is better)
Translates to: IQIHSMAVHTKFHLD*GDLRQSTKVKRYRW
Trigger: CCAACGGTATCGCTTCACCTTCGTGCTTTGCCTGAGATCTCCCAAATCCAAGTGGAATTTGGTGTGCACAGCCATACTGTGTATTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS TCA 72 bp CAGAGTCAGACAACAAGGGACAGAGTTCTGTCTTCCTaGTTTCTCGTAGGTCCTTTCCATGGAAGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: QSQTTRDRVLSS*FLVGPFHGSGK
Trigger: CTTTCCACTTCCATGGAAAGGACCTACGAGAAATCAGGAAGACAGAACTCTGTCCCTTGTTGTCTGACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CCA 72 bp GTGAAGCATCTCAGCTATGGAAGGTTTCATCGTTCGTaGTTGATTACAAAACTATGGTGCAGAGCGCTCAGG +
Preference number: 6 (lower is better)
Translates to: VKHLSYGRFHRS*LITKLWCRALR
Trigger: CCTGAGCGCTCTGCACCATAGTTTTGTAATCAACCACGAACGATGAAACCTTCCATAGCTGAGATGCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CAA 72 bp CAAATACACAGTATGGCTGTGCACACCAAATTCCACTaGGATTTGGGAGATCTCAGGCAAAGCACGAAGGTG +
Preference number: 6 (lower is better)
Translates to: QIHSMAVHTKFH*DLGDLRQSTKV
Trigger: CACCTTCGTGCTTTGCCTGAGATCTCCCAAATCCAAGTGGAATTTGGTGTGCACAGCCATACTGTGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CAA 90 bp GAGAAGATACAAATACACAGTATGGCTGTGCACACCAAATTCCACTaGGATTTGGGAGATCTCAGGCAAAGCACGAAGGTGAAGCGATAC +
Preference number: 6 (lower is better)
Translates to: EKIQIHSMAVHTKFH*DLGDLRQSTKVKRY
Trigger: GTATCGCTTCACCTTCGTGCTTTGCCTGAGATCTCCCAAATCCAAGTGGAATTTGGTGTGCACAGCCATACTGTGTATTTGTATCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS GCA 72 bp GAGGGGGAGAGAAGATACAAATACACAGTATGGCTGTaGACACCAAATTCCACTTGGATTTGGGAGATCTCA +
Preference number: 6 (lower is better)
Translates to: EGERRYKYTVWL*TPNSTWIWEIS
Trigger: TGAGATCTCCCAAATCCAAGTGGAATTTGGTGTGCACAGCCATACTGTGTATTTGTATCTTCTCTCCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CCA 72 bp TCGTGGTTGATTACAAAACAACGTCTCCTCCTAAACTaGAGCGCCAGGTCGTGTATAAGGAGTCAATATAGG +
Preference number: 6 (lower is better)
Translates to: SWLITKQRLLLN*SARSCIRSQYR
Trigger: CCTATATTGACTCCTTATACACGACCTGGCGCTCCAGTTTAGGAGGAGACGTTGTTTTGTAATCAACCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241274.3
CDS CAA 72 bp AAGCATCTCAGCTATGGAAGGTTTCATCGTTCGTGGTaGATTACAAAACTATGGTGCAGAGCGCTCAGGATC +
Preference number: 6 (lower is better)
Translates to: KHLSYGRFHRSW*ITKLWCRALRI
Trigger: GATCCTGAGCGCTCTGCACCATAGTTTTGTAATCAACCACGAACGATGAAACCTTCCATAGCTGAGATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475390.2
CDS CAA 90 bp TTATTAAATCCTCGCTCTTTGCAGTTGACAGTCAAGCCAAGGTCATaGATGTGCAAATTACAGGTACACCCAGTGGGGCATATAATGGGG +
Preference number: 6 (lower is better)
Translates to: LLNPRSLQLTVKPRS*MCKLQVHPVGHIMG
Trigger: CCCCATTATATGCCCCACTGGGTGTACCTGTAATTTGCACATCAATGACCTTGGCTTGACTGTCAACTGCAAAGAGCGAGGATTTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS GCA 72 bp TCTTTGCAGTTGACAGTCAAGCCAAGGTCATTGATGTaGAAATTACAGGTACACCCAGTGGGGCATATAATG +
Preference number: 6 (lower is better)
Translates to: SLQLTVKPRSLM*KLQVHPVGHIM
Trigger: CATTATATGCCCCACTGGGTGTACCTGTAATTTGCACATCAATGACCTTGGCTTGACTGTCAACTGCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS TCA 72 bp TGTTCGAGGCTGTTTGGTGGGCTTAGGCTGTTTATTTaGGGACTTGTATTCGACAGAAGAAGCAGTAAAATG +
Preference number: 6 (lower is better)
Translates to: CSRLFGGLRLFI*GLVFDRRSSKM
Trigger: CATTTTACTGCTTCTTCTGTCGAATACAAGTCCTCAAATAAACAGCCTAAGCCCACCAAACAGCCTCGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS CAA 90 bp TTTCCACGTAGGTCCAAATGGGTTAAAGAGACAGCCTTAAATAAATaGGTTGGAAGCATGGGGATGAGATTATCATTTAAAATCAGAACC +
Preference number: 6 (lower is better)
Translates to: FPRRSKWVKETALNK*VGSMGMRLSFKIRT
Trigger: GGTTCTGATTTTAAATGATAATCTCATCCCCATGCTTCCAACCAATTTATTTAAGGCTGTCTCTTTAACCCATTTGGACCTACGTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241274.3
ENST00000475390.2
CDS TCA 72 bp CATAGAATTCCTCTGCAGATACAGTTTAAAAGGTCTTaGCCAGAACTCGGTAATCTGACTAATATTTGTAAA +
Preference number: 6 (lower is better)
Translates to: HRIPLQIQFKRS*PELGNLTNICK
Trigger: TTTACAAATATTAGTCAGATTACCGAGTTCTGGTCAAGACCTTTTAAACTGTATCTGCAGAGGAATTCTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241274.3
ENST00000475390.2
ENST00000497724.1