RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLITRK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185985

Ensembl transcript IDs: ENST00000335565.6, ENST00000370490.1

Found 611 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGATGCTGCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATaGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGAT +
Preference number: 1 (lower is better)
Translates to: EMLLSRRVLCSILLK*VGCSDCSGLLLCYD
Trigger: ATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGCAGCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CCA 90 bp AATTACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTTaGCAGGGCCCTGGGAGACTGCATTCTGTAGGCTGGAACCATTTT +
Preference number: 1 (lower is better)
Translates to: NYHLSFVGPDIQICS*QGPGRLHSVGWNHF
Trigger: AAAATGGTTCCAGCCTACAGAATGCAGTCTCCCAGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CCA 90 bp GCACTTTATGGAATATGTGCTTATGGAATACCCTCTACTGTAACATaGCCACATCTGAGAAAAGAGATGCTGCTGAGCAGAAGAGTCCTG +
Preference number: 1 (lower is better)
Translates to: ALYGICAYGIPSTVT*PHLRKEMLLSRRVL
Trigger: CAGGACTCTTCTGCTCAGCAGCATCTCTTTTCTCAGATGTGGCCATGTTACAGTAGAGGGTATTCCATAAGCACATATTCCATAAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CCA 90 bp AAAAACTTAACTTCCTGCATTGCATTACTGTCTCCACTGTTAATCTaGGCGATTGCCATTCAGGTAAGACTCTCTCTTATTAGCACGAAG +
Preference number: 1 (lower is better)
Translates to: KNLTSCIALLSPLLI*AIAIQVRLSLISTK
Trigger: CTTCGTGCTAATAAGAGAGAGTCTTACCTGAATGGCAATCGCCCAGATTAACAGTGGAGACAGTAATGCAATGCAGGAAGTTAAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR TCA 90 bp CTTCTTTCAGACGCCATCGCTTGCTTTAATAAGGAATTGAAAAGCTaGACTACTTTATATGCAGATCACCATCCCAGTTGCATAAGGATT +
Preference number: 1 (lower is better)
Translates to: LLSDAIACFNKELKS*TTLYADHHPSCIRI
Trigger: AATCCTTATGCAACTGGGATGGTGATCTGCATATAAAGTAGTTCAGCTTTTCAATTCCTTATTAAAGCAAGCGATGGCGTCTGAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR TCA 90 bp TCTCCACATGACGATAAAGGATTATTATGTGCAGTAACCTATTTATaGAAAGGAAACAGTGTGCTTCTTTCAGACGCCATCGCTTGCTTT +
Preference number: 1 (lower is better)
Translates to: SPHDDKGLLCAVTYL*KGNSVLLSDAIACF
Trigger: AAAGCAAGCGATGGCGTCTGAAAGAAGCACACTGTTTCCTTTTCATAAATAGGTTACTGCACATAATAATCCTTTATCGTCATGTGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CCA 90 bp TACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTaGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTAT +
Preference number: 1 (lower is better)
Translates to: YLKCEGTLTQSSDTQ*LYSVTDDGNTIYHY
Trigger: ATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
3UTR-3UTR CCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCTTCTTGGCAGGGCCCTaGGAGACTGCATTCTGTAGG +
Preference number: 2 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAFLAGP*ETAFCR
Trigger: CCTACAGAATGCAGTCTCCCAGGGCCCTGCCAAGAA...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCATGGTCGAAAGTGCTTaGGCAGATAAAGCAAAACAG +
Preference number: 2 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAMVESA*ADKAKQ
Trigger: CTGTTTTGCTTTATCTGCTCAAGCACTTTCGACCAT...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR CCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCATCTCCACTGTTAATCTaGGCGATTGCCATTCAGGTA +
Preference number: 2 (lower is better)
Translates to: FKHKPLATSKLVAQAALASPLLI*AIAIQV
Trigger: TACCTGAATGGCAATCGCCCAGATTAACAGTGGAGA...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CAA 90 bp AAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTaGGCAAAACACAGTTACTATGCAGGTGGGCTCTGTTTTAAGCAA +
Preference number: 2 (lower is better)
Translates to: KHKPLATSKLVAQAA*AKHSYYAGGLCFKQ
Trigger: TTGCTTAAAACAGAGCCCACCTGCATAGTAACTGTGTTTTGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR CCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTCTGCATTCTGTAGGCTaGAACCATTTTGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIALHSVG*NHFAVL
Trigger: CAGCACAGCAAAATGGTTCCAGCCTACAGAATGCAG...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCCGGAGCAGCATCCTCTaGTGCCTTAGGGTTGTAAAT +
Preference number: 2 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASRSSIL*CLRVVN
Trigger: ATTTACAACCCTAAGGCATCAGAGGATGCTGCTCCG...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR GCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCTCAGACGCCATCGCTTaGTTTAATAAGGAATTGAAA +
Preference number: 2 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIASDAIA*FNKELK
Trigger: TTTCAATTCCTTATTAAAGCAAGCGATGGCGTCTGA...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CAA 90 bp GAATTACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTaGGCAGGGCCCTGGGAGACTGCATTCTGTAGGCTGGAACCATTT +
Preference number: 2 (lower is better)
Translates to: ELPFVICRARHTDMF*AGPWETAFCRLEPF
Trigger: AAATGGTTCCAGCCTACAGAATGCAGTCTCCCAGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CAA 90 bp TTCCTTACTCACCAGCTGCTGGAGAGAACTAACAAGGCACACAGGTaGACCATAGTCCAGAACCAAATTAGGCTCTTAGCAATTGTGTTC +
Preference number: 2 (lower is better)
Translates to: FLTHQLLERTNKAHR*TIVQNQIRLLAIVF
Trigger: GAACACAATTGCTAAGAGCCTAATTTGGTTCTGGACTATGGTCAACCTGTGTGCCTTGTTAGTTCTCTCCAGCAGCTGGTGAGTAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCGGAGCAGCATCCTCTaGTGCCTTAGGGTTGTAAAT +
Preference number: 2 (lower is better)
Translates to: SLPILSSVTIISSSHSHTRSSIL*CLRVVN
Trigger: ATTTACAACCCTAAGGCATCAGAGGATGCTGCTCCG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
3UTR-3UTR GCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGAGTTAATCTGGGCGATTaGCATTCAGGTAAGACTCTC +
Preference number: 2 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRVNLGD*HSGKTL
Trigger: GAGAGTCTTACCTGAATGGCAATCGCCCAGATTAAC...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTTTATCTCTGCTACCTTaGATTTTGCAGAGAACTTAC +
Preference number: 2 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIALSLLP*ILQRTY
Trigger: GTAAGTTCTCTGCAAAATTCAAGGTAGCAGAGATAA...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGAAACATTCATGTCCACTaGTGGTTCCTAAGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRNIHVH*WFLRRE
Trigger: TTCTCTTCTTAGGAACCATCAGTGGACATGAATGTT...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCGACGCAAATAGTACTTaGTTTGATAGCACCCCATTA +
Preference number: 2 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASDANST*FDSTPL
Trigger: TAATGGGGTGCTATCAAATCAAGTACTATTTGCGTC...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR GCA 90 bp TACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTTGGCAGGGCCCTCTGAACTACTTTATATaGAGATCACCATCCCAGTTG +
Preference number: 2 (lower is better)
Translates to: YHLSFVGPDIQICSWQGPLNYFI*RSPSQL
Trigger: CAACTGGGATGGTGATCTGCATATAAAGTAGTTCAG...AGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp TACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTTGGCAGGGCCCTAAGCAAACTGTACGTTaGCTTAATATAGCTGACACA +
Preference number: 2 (lower is better)
Translates to: YHLSFVGPDIQICSWQGPKQTVR*LNIADT
Trigger: TGTGTCAGCTATATTAAGTCAACGTACAGTTTGCTT...AGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCGCAGTAACCTATTTATaGAAAGGAAACAGTGTGCTT +
Preference number: 2 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASAVTYL*KGNSVL
Trigger: AAGCACACTGTTTCCTTTTCATAAATAGGTTACTGC...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCTATCATTGCATCAAATaGGAGCAGTCAGAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASYHCIK*EQSEKD
Trigger: ATCCTTTTCTGACTGCTCTCATTTGATGCAATGATA...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGAAAAAGAAGAGGAAATTaGAGGGTCATTTCCTTACTC +
Preference number: 2 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRKRRGN*RVISLL
Trigger: GAGTAAGGAAATGACCCTTCAATTTCCTCTTCTTTT...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAACATTCATGTCCACTaGTGGTTCCTAAGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLNIHVH*WFLRRE
Trigger: TTCTCTTCTTAGGAACCATCAGTGGACATGAATGTT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
3UTR-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGTAATGTACTTAAAGTaGGAAGGCACTTTAACACAA +
Preference number: 2 (lower is better)
Translates to: KVLELESFDDRLVSITQAVMYLK*EGTLTQ
Trigger: TTGTGTTAAAGTGCCTTCGCACTTTAAGTACATTAC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
3UTR-3UTR CAA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTGAAGGGAATTACCATTaGTCATTTGTAGGGCCAGAC +
Preference number: 3 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIAEGNYH*SFVGPD
Trigger: GTCTGGCCCTACAAATGACAAATGGTAATTCCCTTC...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR CAA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTGTAGCACAAGCAGCCTaGGCAAAACACAGTTACTAT +
Preference number: 3 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIAVAQAA*AKHSYY
Trigger: ATAGTAACTGTGTTTTGCCAAGGCTGCTTGTGCTAC...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR CAA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCATGTACATTAACTTTCTaGAAGATCATTTCAGCCCAC +
Preference number: 3 (lower is better)
Translates to: FKHKPLATSKLVAQAALACTLTF*KIISAH
Trigger: GTGGGCTGAAATGATCTTCAAGAAAGTTAATGTACA...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CCA 72 bp CTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATaGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTG +
Preference number: 3 (lower is better)
Translates to: LSRRVLCSILLK*VGCSDCSGLLL
Trigger: CAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CCA 72 bp CAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTaGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTA +
Preference number: 3 (lower is better)
Translates to: QKSPVFNFVEMG*LLRLFRTATVL
Trigger: TAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR CCA 72 bp TGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTaGCTATACTCGGTAACTGACGATGGAAATACCATA +
Preference number: 3 (lower is better)
Translates to: CEGTLTQSSDTQ*LYSVTDDGNTI
Trigger: TATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
3UTR CCA 72 bp ACTTCCTGCATTGCATTACTGTCTCCACTGTTAATCTaGGCGATTGCCATTCAGGTAAGACTCTCTCTTATT +
Preference number: 3 (lower is better)
Translates to: TSCIALLSPLLI*AIAIQVRLSLI
Trigger: AATAAGAGAGAGTCTTACCTGAATGGCAATCGCCCAGATTAACAGTGGAGACAGTAATGCAATGCAGGAAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR-3UTR CAA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTCAAAAGCTAATGTCCTaGTTTCCAACAGTTCGGAGC +
Preference number: 3 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIQKLMS*FPTVRS
Trigger: GCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTG...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
3UTR GCA 72 bp ATAAAACCTGTGACTCTGAGCACTTTATGGAATATGTaGTTATGGAATACCCTCTACTGTAACATGGCCACA +
Preference number: 3 (lower is better)
Translates to: IKPVTLSTLWNM*LWNTLYCNMAT
Trigger: TGTGGCCATGTTACAGTAGAGGGTATTCCATAAGCACATATTCCATAAAGTGCTCAGAGTCACAGGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCAGGCGCCCGCAGCATCTaGGACTCGGGGAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FKHKPLATSKLVAQAALAGARSI*DSGRQR
Trigger: CCTTTGCCTCCCCGAGTCGCAGATGCTGCGGGCGCC...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCAGGGAGGGACTGGGGTaGGATTCTGTAGGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAREGLG*DSVGRS
Trigger: CGACCTCCCTACAGAATCGCACCCCAGTCCCTCCCT...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCGAATCTGAGAGGCTTTaGAGGCTCCCCGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAESERL*RLPGTG
Trigger: TCCTGTCCCGGGGAGCCTGCAAAGCCTCTCAGATTC...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCGAGTTTTCAGGCCACTaGATGCCCCCGTTCGGATCT +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAEFSGH*MPPFGS
Trigger: AGATCCGAACGGGGGCATTCAGTGGCCTGAAAACTC...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCACCCCTGAGGTCTAAGTaGGTCAGCAGGACAAAGCGG +
Preference number: 4 (lower is better)
Translates to: FKHKPLATSKLVAQAALAPLRSK*VSRTKR
Trigger: CCGCTTTGTCCTGCTGACCCACTTAGACCTCAGGGG...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCGACAGAGGTCTTGCCTaGTCAGCTGGGTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIADRGLA*SAGSRL
Trigger: AAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTC...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCCAGCCTCGATGGCACTaGTGTAATTGTAGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAQPRWH*CNCSRP
Trigger: AGGCCGACTACAATTACATCAGTGCCATCGAGGCTG...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCGCAGATCTATCTGGATaGAAGCCGGGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAADLSG*KPGADP
Trigger: TGGATCAGCTCCCGGCTTTCATCCAGATAGATCTGC...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGGGACAGGACTAGGGTaGCGTCACGGGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNGTGLG*RHGGGG
Trigger: GCCCCCTCCCCCGTGACGTCACCCTAGTCCTGTCCC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCTGTCTAGCCAGGCCTTaGGAGGAAGTAAGTCACAAG +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIACLARP*EEVSHK
Trigger: CTTGTGACTTACTTCCTCTCAAGGCCTGGCTAGACA...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCAGGGTGGTTGGGTTTTaGCTGCCCCACAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIARVVGF*LPHKAF
Trigger: AAATGCTTTGTGGGGCAGTCAAAACCCAACCACCCT...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGACGGCCACTCGGGCTaGCCTCGCCATGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTDGHSG*PRHGTW
Trigger: CCAAGTCCCATGGCGAGGGCAGCCCGAGTGGCCGTC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGGCACCGCCTCGGACTaGCGCAGCCCAGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNGTASD*RSPGAR
Trigger: TCTCGCTCCTGGGCTGCGCCAGTCCGAGGCGGTGCC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCCGATCGCCGGTAACTaGGCACCGGCCGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYPIAGN*APAASA
Trigger: TGCGCTGGCGGCCGGTGCCCAGTTACCGGCGATCGG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
3UTR CAA 72 bp CCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTaGGCAAAACACAGTTACTATGCAGGTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PLATSKLVAQAA*AKHSYYAGGLC
Trigger: ACAGAGCCCACCTGCATAGTAACTGTGTTTTGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATGGGACAGGACTAGGGTaGCGTCACGGGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHGTGLG*RHGGGG
Trigger: GCCCCCTCCCCCGTGACGTCACCCTAGTCCTGTCCC...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTCCGTTGTTACCTAGGTaGAGAGTCACCGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIAPLLPR*RVTALE
Trigger: CTCCAACGCGGTGACTCTTCACCTAGGTAACAACGG...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATCTGCTAGACGCCTGGTaGGGTGCCCGGCATGCGGAC +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNLLDAW*GARHAD
Trigger: GTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAG...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCATTGGACTGGTCGGTTTaGGCTGCAGGTCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: FKHKPLATSKLVAQAALALDWSV*AAGQRY
Trigger: ATATCTCTGACCTGCAGCCCAAACCGACCAGTCCAA...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTTTCTTGGCAGGGCCCTaGGAGACTGCATTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIAFLAGP*ETAFCR
Trigger: CCTACAGAATGCAGTCTCCCAGGGCCCTGCCAAGAA...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGGGCTGCCCTCGCCATaGGACTTGGGCACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYGLPSP*DLGTAG
Trigger: GCCTGCAGTGCCCAAGTCCCATGGCGAGGGCAGCCC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCGGACGGTCCCGGGGTaGGGAATCTCCAGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYRTVPG*GISSGD
Trigger: ATCCCCACTGGAGATTCCTCACCCCGGGACCGTCCG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTAAAGCACTGCCAGGCTaGGCCTCAGCTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTKALPG*ASAGSG
Trigger: CCCACTCCCAGCTGAGGCTCAGCCTGGCAGTGCTTT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGTGCGGTGCCCGGCATaGGGACCTACAGCCGCGACG +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAVRCPA*GPTAAT
Trigger: CGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGCAC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCAGCCCTACCTTCCCTaGCCCTACCTGCTAGACGCC +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTQPYLP*PYLLDA
Trigger: GGCGTCTAGCAGGTAGGGGCAGGGAAGGTAGGGCTG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCCCCTCTACTGTAACATaGCCACATCTGAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAPSTVT*PHLRKE
Trigger: CTCTTTTCTCAGATGTGGCCATGTTACAGTAGAGGG...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCTCGCCATGGGACTTaGGCACTGCAGGCCGACCGG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHPRHGT*ALQADR
Trigger: CCGGTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCACCAGCTGAATCTCCATaGTCCCTCCAATATGTTCAA +
Preference number: 4 (lower is better)
Translates to: FKHKPLATSKLVAQAALAPAESP*SLQYVQ
Trigger: TTGAACATATTGGAGGGATCATGGAGATTCAGCTGG...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCTACTTCACTCAAAGATaGAGTGGTTTCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAYFTQR*SGFQES
Trigger: AGACTCCTGGAAACCACTTCATCTTTGAGTGAAGTA...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTCTGGTCGGTTTGGGCTaGAGGTCAGAGATATTAGTG +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIALVGLG*RSEILV
Trigger: CACTAATATCTCTGACCTGCAGCCCAAACCGACCAG...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATATGGGACTTGGGCACTaGAGGCCGACCGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYMGLGH*RPTGGF
Trigger: GAAGCCTCCGGTCGGCCTGCAGTGCCCAAGTCCCAT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGACGCCTGGTGCGGTaGCCGGCATGCGGACCTACA +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHRRLVR*PACGPT
Trigger: TGTAGGTCCGCATGCCGGGCACCGCACCAGGCGTCT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATACAGGACACGGTGGGTaGCGGCGGGCTTACAGCCCA +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHTGHGG*RRAYSP
Trigger: TGGGCTGTAAGCCCGCCGGCACCCACCGTGTCCTGT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGCGGTGGGGGAGGGTTaGGCAGATGCTTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYAVGEG*ADASLP
Trigger: AGGAAGGGAAGCATCTGCCCAACCCTCCCCCACCGC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTATCCAGGGCGCGCGGTaGGGGAGGGTTGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIIQGAR*GRVGQM
Trigger: CATCTGCCCAACCCTCCCCCACCGCGCGCCCTGGAT...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAATCCAGGGCGCGCGGTaGGGGAGGGTTGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLIQGAR*GRVGQM
Trigger: CATCTGCCCAACCCTCCCCCACCGCGCGCCCTGGAT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATGGCGACGACGGAGCCTaGGCGCGCGTTTCCAATTCG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHGDDGA*ARVSNS
Trigger: CGAATTGGAAACGCGCGCCCAGGCTCCGTCGTCGCC...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTTTTGGGCGGCCGGCTaGCTTTCGGAGCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYFWAAG*LSEPWL
Trigger: CAACCAGGGCTCCGAAAGCCAGCCGGCCGCCCAAAA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTAGAGTTTCTTTGGACTaGTCGGTTTGGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIARVSLD*SVWAAG
Trigger: ACCTGCAGCCCAAACCGACCAGTCCAAAGAAACTCT...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTACCTGCTAGACGCCTaGTGCGGTGCCCGGCATGCG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHYLLDA*CGARHA
Trigger: CGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATGCCCTGCTAATGGCCTaGCACCTCCTTGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHALLMA*HLLGPL
Trigger: GAGGGGCCCAAGGAGGTGCCAGGCCATTAGCAGGGC...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370490.1
3UTR CAA 72 bp TTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTaGGCAGGGCCCTGGGAGACTGCATTCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: FVICRARHTDMF*AGPWETAFCRL
Trigger: CAGCCTACAGAATGCAGTCTCCCAGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp TACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTTGGCAGGGCCCTTTAGCCTATTCCCCCTaGGGTCTAAGTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: YHLSFVGPDIQICSWQGPLAYSP*GLSGSA
Trigger: TGCTGACCCACTTAGACCTCAGGGGGAATAGGCTAA...AGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCAGACCCATACTGTAATTaGAAGGAGCTTACGTCTAAG +
Preference number: 4 (lower is better)
Translates to: FKHKPLATSKLVAQAALADPYCN*KELTSK
Trigger: CTTAGACGTAAGCTCCTTTCAATTACAGTATGGGTC...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTGGCCCCGTGTCTTCTaGAGAACTGCCGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNWPRVF*RTAAAL
Trigger: GAGTGCTGCGGCAGTTCTTCAGAAGACACGGGGCCA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAGGGAGGGACTGGGGTaGGATTCTGTAGGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYREGLG*DSVGRS
Trigger: CGACCTCCCTACAGAATCGCACCCCAGTCCCTCCCT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCAACAGACAGCGGATCTTaGAAATGTCTTTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: FKHKPLATSKLVAQAALATDSGS*KCLWQF
Trigger: AAACTGCCAAAGACATTTGCAAGATCCGCTGTCTGT...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCTGGGACAGAGGTCTTaGCTGGTCAGCTGGGTCACG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYLGQRS*LVSWVT
Trigger: CGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGCGTTTCCAATTCGGTaGCGGTGGCAGCAGTGCGTC +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNAFPIR*RWQQCV
Trigger: GACGCACTGCTGCCACCGCCACCGAATTGGAAACGC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGGCGACGACGGAGCCTaGGCGCGCGTTTCCAATTCG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLGDDGA*ARVSNS
Trigger: CGAATTGGAAACGCGCGCCCAGGCTCCGTCGTCGCC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTTGGCAGGGCCCTCATCTCCTCCTCCCCTaGGGTATCTCGAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: YHLSFVGPDIQICSWQGPHLLLP*GISKRS
Trigger: AGATCTCTTCGAGATACCCCAGGGGAGGAGGAGATG...AGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGACAGCCTTTGGACGTaGGTGTCAGCATGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLDSLWT*VSAWLP
Trigger: GGGCAGCCATGCTGACACCCACGTCCAAAGGCTGTC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGAAGTTGTTGGTATTCCTaGGAACGCTCGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRSCWYS*ERSALP
Trigger: AGGGAGTGCCGAGCGTTCCCAGGAATACCAACAACT...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTTCCACAGGACACGGTaGGTGCCGGCGGGCTTACAG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHFHRTR*VPAGLQ
Trigger: CTGTAAGCCCGCCGGCACCCACCGTGTCCTGTGGAA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATAGAGGGACAGCCCTGTaGATGGCCTCCCACCCTGTA +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNRGTAL*MASHPV
Trigger: TACAGGGTGGGAGGCCATCCACAGGGCTGTCCCTCT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAGCCTCAGCTGGGAGTaGGAGCCAAAGGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYSLSWE*EPKEGW
Trigger: CCACCCTTCCTTTGGCTCCCACTCCCAGCTGAGGCT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCAGGCAAACCTTAGGTaGGGGCAGGGGGAAGAAGCG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYQANLR*GQGEEA
Trigger: CGCTTCTTCCCCCTGCCCCCACCTAAGGTTTGCCTG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
3UTR CAA 72 bp CACCAGCTGCTGGAGAGAACTAACAAGGCACACAGGTaGACCATAGTCCAGAACCAAATTAGGCTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HQLLERTNKAHR*TIVQNQIRLLA
Trigger: TGCTAAGAGCCTAATTTGGTTCTGGACTATGGTCAACCTGTGTGCCTTGTTAGTTCTCTCCAGCAGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATGAGAAGAGTTGGAGCTaGGGGAAGCCGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHEKSWS*GKPSCQ
Trigger: CTGGCAGCTCGGCTTCCCTCAGCTCCAACTCTTCTC...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGCAGCTCGCCCGTCTTaGGCTCCCAGCAGAAATCGC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAAARPS*APSRNR
Trigger: GCGATTTCTGCTGGGAGCTCAAGACGGGCGAGCTGC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCGGATTTTCCTCCAGCTaGATCTCCATGATCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASGFSSS*ISMIPP
Trigger: TGGAGGGATCATGGAGATTCAGCTGGAGGAAAATCC...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGCATGGCTGCCCCTCTaGCTGGAATCACTGGCACTT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNAWLPL*LESLAL
Trigger: AAGTGCCAGTGATTCCAGTCAGAGGGGCAGCCATGC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCTTATCTCTGCTACCTTaGATTTTGCAGAGAACTTAC +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIALSLLP*ILQRTY
Trigger: GTAAGTTCTCTGCAAAATTCAAGGTAGCAGAGATAA...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCAAAAGAAGAGGAAATTaGAGGGTCATTTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAKRRGN*RVISLL
Trigger: GAGTAAGGAAATGACCCTTCAATTTCCTCTTCTTTT...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGCTCCCTCTCCTTGCTaGGGCAAGGGAGGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNAPSPC*GKGGLK
Trigger: CTTTAAGCCTCCCTTGCCTCAGCAAGGAGAGGGAGC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTGGAAAGGTTCAGGGTaGACTGGGACCCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYWKGSG*TGTPRE
Trigger: CTCCCTTGGGGTCCCAGTTCACCCTGAACCTTTCCA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGGGTGTCAGCATGGCTaGCCCTCTGACTGGAATCAC +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLGCQHG*PSDWNH
Trigger: GTGATTCCAGTCAGAGGGGCAGCCATGCTGACACCC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCTCTCTTGGTGTGGCCTaGTTTTCTAGCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASSLGVA*FSSSSV
Trigger: CACTGAGCTGCTAGAAAAGCAGGCCACACCAAGAGA...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACCAGAGAGGGGGCACTaGTTGCCCGCAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLPERGH*LPAASS
Trigger: AGAAGAGGCTGCGGGCAAGCAGTGCCCCCTCTCTGG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTCTTGCCTGGTCAGCTaGGTCACGTCTTTCCCATGC +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTSCLVS*VTSFPC
Trigger: GCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATTTTGGGCGGCCGGCTaGCTTTCGGAGCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLFWAAG*LSEPWL
Trigger: CAACCAGGGCTCCGAAAGCCAGCCGGCCGCCCAAAA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCATACAGATATGTTCTTaGCAGGGCCCTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASIQICS*QGPGRL
Trigger: CAGTCTCCCAGGGCCCTGCCAAGAACATATCTGTAT...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTACTGGGAGAATTGTCTaGACGGCTTTCTTCACTCTA +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIATGRIV*TAFFTL
Trigger: TAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGT...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAAGGCTGAGCCTCAGCTaGGAGTGGGAGCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLRLSLS*EWEPKE
Trigger: TTCCTTTGGCTCCCACTCCCAGCTGAGGCTCAGCCT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACCACGGTTAACACACTaGGGAACCAAACGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLPRLTH*GTKRRS
Trigger: TGAGCGGCGTTTGGTTCCTCAGTGTGTTAACCGTGG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCCGTTGTTACCTAGGTaGAGAGTCACCGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYPLLPR*RVTALE
Trigger: CTCCAACGCGGTGACTCTTCACCTAGGTAACAACGG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAGCTGCTGGGACAGGTaGGAGGCACAGGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLSCWDR*EAQETW
Trigger: CCAAGTCTCCTGTGCCTCTCACCTGTCCCAGCAGCT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATATGAAAGCCGGGAGCTaGTCCAGAACCCCTTTCACG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNMKAGS*SRTPFT
Trigger: CGTGAAAGGGGTTCTGGATCAGCTCCCGGCTTTCAT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAATGAAAGCCGGGAGCTaGTCCAGAACCCCTTTCACG +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLMKAGS*SRTPFT
Trigger: CGTGAAAGGGGTTCTGGATCAGCTCCCGGCTTTCAT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGAGATGCTTCCCTTCCTTaGAAGTGGCTTTGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRDASLP*KWLCKA
Trigger: AGCTTTGCAAAGCCACTTGCAAGGAAGGGAAGCATC...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTTTCAGGCCACTGAATaGCCCCGTTCGGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYFQATE*PRSDLL
Trigger: CAGGAGATCCGAACGGGGGCATTCAGTGGCCTGAAA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACTGGGACAGAGGTCTTaGCTGGTCAGCTGGGTCACG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLLGQRS*LVSWVT
Trigger: CGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGATGGTTGGGTTTTGACTaGCCCACAAAGCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRWLGFD*PTKHFL
Trigger: CAGGAAATGCTTTGTGGGGCAGTCAAAACCCAACCA...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCGTAATGTACTTAAAGTaGGAAGGCACTTTAACACAA +
Preference number: 4 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAVMYLK*EGTLTQ
Trigger: TTGTGTTAAAGTGCCTTCGCACTTTAAGTACATTAC...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCATCAGACGCCATCGCTTaGTTTAATAAGGAATTGAAA +
Preference number: 4 (lower is better)
Translates to: FKHKPLATSKLVAQAALASDAIA*FNKELK
Trigger: TTTCAATTCCTTATTAAAGCAAGCGATGGCGTCTGA...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTGTCTTCTGAAGAACTaGCGCAGCACTCCGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNCLLKN*RSTPLG
Trigger: CCCTAGCGGAGTGCTGCGGCAGTTCTTCAGAAGACA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGTGTCAGAAAAGCACTaGCAGGCTGAGCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNVSEKH*QAEPQL
Trigger: CAGCTGAGGCTCAGCCTGGCAGTGCTTTTCTGACAC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCCCGGGAACACACATaGTTGCACCTGATTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHPREHT*LHLISR
Trigger: CCGGGAAATCAGGTGCAAGCATGTGTGTTCCCGGGG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGCGTTTCCAATTCGGTaGCGGTGGCAGCAGTGCGTC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLAFPIR*RWQQCV
Trigger: GACGCACTGCTGCCACCGCCACCGAATTGGAAACGC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTCTTGCCTGGTCAGCTaGGTCACGTCTTTCCCATGC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYSCLVS*VTSFPC
Trigger: GCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGGCTGCCCCTCTGACTaGAATCACTGGCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTGCPSD*NHWHFF
Trigger: GAAAAAGTGCCAGTGATTCCAGTCAGAGGGGCAGCC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGACAGCCTTTGGACGTaGGTGTCAGCATGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQADSLWT*VSAWLP
Trigger: GGGCAGCCATGCTGACACCCACGTCCAAAGGCTGTC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGTAGGTGACAGCCTTTaGACGTGGGTGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNVGDSL*TWVSAW
Trigger: CCATGCTGACACCCACGTCCAAAGGCTGTCACCTAC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGACGATTTCTCATTTTaGGCGGCCGGCTGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLDDFSF*AAGWLS
Trigger: CGAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCAAGTTTGGGCTGTCTaGACAGATAGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYQVWAV*TDSLPP
Trigger: GGGAGGGAGGCTATCTGTCCAGACAGCCCAAACTTG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTAGTTGTTGGTATTCCTaGGAACGCTCGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTSCWYS*ERSALP
Trigger: AGGGAGTGCCGAGCGTTCCCAGGAATACCAACAACT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCAGGCTCTCTTGGTGTaGCCTGCTTTTCTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTQALLV*PAFLAA
Trigger: AGCTGCTAGAAAAGCAGGCCACACCAAGAGAGCCTG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCATTATTGATTCTGTCTTaGTTTTGGCGTCGAGATTCA +
Preference number: 4 (lower is better)
Translates to: FKHKPLATSKLVAQAALALLILS*FWRRDS
Trigger: TGAATCTCGACGCCAAAACCAAGACAGAATCAATAA...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTTGTGGCGGCCTCTACTaGTGTGTGTTTATAGAAAAT +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIACGGLY*CVFIEN
Trigger: ATTTTCTATAAACACACACCAGTAGAGGCCGCCACA...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp TACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTTGGCAGGGCCCTCTGCATTCTGTAGGCTaGAACCATTTTGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: YHLSFVGPDIQICSWQGPLHSVG*NHFAVL
Trigger: CAGCACAGCAAAATGGTTCCAGCCTACAGAATGCAG...AGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGGACAGCCCTGTGGATaGCCTCCCACCCTGTATTGC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLGQPCG*PPTLYC
Trigger: GCAATACAGGGTGGGAGGCCATCCACAGGGCTGTCC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTCTTTGCTACAGGACTaGTGCCCCACTTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYSLLQD*CPTCQL
Trigger: GAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAACTCCACCTCCAACCTaGCTGGCGGCAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQATPPPT*LAAGEA
Trigger: AGCTTCTCCTGCCGCCAGCCAGGTTGGAGGTGGAGT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAGCAAGGAGGCGGAGTaGGAGCGAGGGAGAATGAGG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLSKEAE*ERGRMR
Trigger: CCTCATTCTCCCTCGCTCCCACTCCGCCTCCTTGCT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGGATTTTCCTCCAGCTaGATCTCCATGATCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTGFSSS*ISMIPP
Trigger: TGGAGGGATCATGGAGATTCAGCTGGAGGAAAATCC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGCATGGCTGCCCCTCTaGCTGGAATCACTGGCACTT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLAWLPL*LESLAL
Trigger: AAGTGCCAGTGATTCCAGTCAGAGGGGCAGCCATGC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCATTGTCTGAGCTCTaGGAGGTGCAGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHPLSEL*EVQTQL
Trigger: CAGCTGTGTCTGCACCTCTCAGAGCTCAGACAATGG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGCAGATCTATCTGGATaGAAGCCGGGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYADLSG*KPGADP
Trigger: TGGATCAGCTCCCGGCTTTCATCCAGATAGATCTGC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACAAGACGGTTCCATCTaGCAAGTTTGGGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLQDGSI*QVWAVW
Trigger: CCAGACAGCCCAAACTTGTCAGATGGAACCGTCTTG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCCAGGTTGCTATAGCTaGACTCTTGCAGGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTPGCYS*TLAGFG
Trigger: ACCGAAACCTGCAAGAGTTCAGCTATAGCAACCTGG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGTCTGTGTAGGAGGGTaGGGAGTTCTCTTAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNVCVGG*GVLLGD
Trigger: ATCCCCTAAGAGAACTCCTCACCCTCCTACACAGAC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGAATCTGAGAGGCTTTaGAGGCTCCCCGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLESERL*RLPGTG
Trigger: TCCTGTCCCGGGGAGCCTGCAAAGCCTCTCAGATTC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTTTCAGGCCACTGAATaGCCCCGTTCGGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHFQATE*PRSDLL
Trigger: CAGGAGATCCGAACGGGGGCATTCAGTGGCCTGAAA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGGGTGTCAGCATGGCTaGCCCTCTGACTGGAATCAC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAGCQHG*PSDWNH
Trigger: GTGATTCCAGTCAGAGGGGCAGCCATGCTGACACCC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTCATTCAGATAAAGTCTaGGTAAACTGGTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIAHSDKV*VNWSGL
Trigger: CAAACCTGACCAGTTTACGCAGACTTTATCTGAATG...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTGCACTTCAAGGTAATTaGCATTCAGATAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIAALQGN*HSDKVC
Trigger: GCAGACTTTATCTGAATGGCAATTACCTTGAAGTGC...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTCTGAACTACTTTATATaGAGATCACCATCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIALNYFI*RSPSQL
Trigger: CAACTGGGATGGTGATCTGCATATAAAGTAGTTCAG...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAGAGGGGGCACTGCTTaGCCGCAGCCTCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLRGGTA*PQPLLL
Trigger: TAGAAGAAGAGGCTGCGGGCAAGCAGTGCCCCCTCT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGACTGGTGCCCCACTTaGCAGCTCCTAGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLDWCPT*QLLAQM
Trigger: CATCTGAGCTAGGAGCTGGCAAGTGGGGCACCAGTC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACCCCTGAGGTCTAAGTaGGTCAGCAGGACAAAGCGG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLPLRSK*VSRTKR
Trigger: CCGCTTTGTCCTGCTGACCCACTTAGACCTCAGGGG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATGACAGAGGTCTTGCCTaGTCAGCTGGGTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHDRGLA*SAGSRL
Trigger: AAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTC...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACACTGGCACTTTTTCTaGGACAGAGGTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLHWHFF*DRGLAW
Trigger: CCAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGGCTGCCCCTCTGACTaGAATCACTGGCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYGCPSD*NHWHFF
Trigger: GAAAAAGTGCCAGTGATTCCAGTCAGAGGGGCAGCC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGCTTGCAGTAAAGGGTaGTTGGGTTTTGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLACSKG*LGFDCP
Trigger: GGGGCAGTCAAAACCCAACCACCCTTTACTGCAAGC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCAGTAGTGATACCCAGTaGCTATACTCGGTAACTGAC +
Preference number: 4 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASSSDTQ*LYSVTD
Trigger: GTCAGTTACCGAGTATAGCCACTGGGTATCACTACT...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp TACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTTGGCAGGGCCCTCACTCAAAGATGAAGTaGTTTCCAGGAGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YHLSFVGPDIQICSWQGPHSKMK*FPGVFS
Trigger: GGAGAAGACTCCTGGAAACCACTTCATCTTTGAGTG...AGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGATCTCCACTGTTAATCTaGGCGATTGCCATTCAGGTA +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRSPLLI*AIAIQV
Trigger: TACCTGAATGGCAATCGCCCAGATTAACAGTGGAGA...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTGCCTGGAAAGGCCTTaGTTGCCTCTGGTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHCLERP*LPLVGR
Trigger: CCTTCCTACCAGAGGCAACCAAGGCCTTTCCAGGCA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAATGTCTGCTGTTGCCTaGAAAGGCCTTGGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLMSAVA*KGLGCL
Trigger: GAGGCAACCAAGGCCTTTCCAGGCAACAGCAGACAT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACATCAGGAGAAGACTaGATCCCTCTCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNTSGED*IPLLCS
Trigger: ACTGCAGAGGAGAGGGATTCAGTCTTCTCCTGATGT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATACATCAGGAGAAGACTaGATCCCTCTCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYTSGED*IPLLCS
Trigger: ACTGCAGAGGAGAGGGATTCAGTCTTCTCCTGATGT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACCACGGTTAACACACTaGGGAACCAAACGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAPRLTH*GTKRRS
Trigger: TGAGCGGCGTTTGGTTCCTCAGTGTGTTAACCGTGG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCCCGCGTTGGAGTAATTaGCAAATTCGTTTGGATACA +
Preference number: 4 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASPRWSN*QIRLDT
Trigger: TGTATCCAAACGAATTTGTCAATTACTCCAACGCGG...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGAGTTTTCAGGCCACTaGATGCCCCCGTTCGGATCT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLEFSGH*MPPFGS
Trigger: AGATCCGAACGGGGGCATTCAGTGGCCTGAAAACTC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAGGATTCATTGTAGGTaGCAGCCTTTGGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYRIHCR*QPLDVG
Trigger: ACCCACGTCCAAAGGCTGTCACCTACAATGAATCCT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTGGTCTGGTACACCATaGTGGGTCCAAAACTTTGCC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYWSGTP*WVQNFA
Trigger: GGCAAAGTTTTGGACCCATCATGGTGTACCAGACCA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACCATTGTCTGAGCTCTaGGAGGTGCAGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLPLSEL*EVQTQL
Trigger: CAGCTGTGTCTGCACCTCTCAGAGCTCAGACAATGG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCCTTTCACGGGCAGGTaGGAAAAATGGTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTPFTGR*EKWLFL
Trigger: GAGAAACAACCATTTTTCTCACCTGCCCGTGAAAGG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCAAGACGGTTCCATCTaGCAAGTTTGGGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHQDGSI*QVWAVW
Trigger: CCAGACAGCCCAAACTTGTCAGATGGAACCGTCTTG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATCCAGGTTGCTATAGCTaGACTCTTGCAGGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNPGCYS*TLAGFG
Trigger: ACCGAAACCTGCAAGAGTTCAGCTATAGCAACCTGG...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGAGGTAGTCCGGTTCTaGTTGCGGCTTAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLEVVRF*LRLSLQ
Trigger: CTGCAAGCTAAGCCGCAATCAGAACCGGACTACCTC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGAGGTAGTCCGGTTCTaGTTGCGGCTTAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAEVVRF*LRLSLQ
Trigger: CTGCAAGCTAAGCCGCAATCAGAACCGGACTACCTC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCGGAGCAGCATCCTCTaGTGCCTTAGGGTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYRSSIL*CLRVVN
Trigger: ATTTACAACCCTAAGGCATCAGAGGATGCTGCTCCG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTAAGCAAACTGTACGTTaGCTTAATATAGCTGACACA +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIAKQTVR*LNIADT
Trigger: TGTGTCAGCTATATTAAGTCAACGTACAGTTTGCTT...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGAAAAGAGATGCTGCTaGGCAGAAGAGTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTEKRCC*AEESCV
Trigger: AACACAGGACTCTTCTGCTCAGCAGCATCTCTTTTC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATAGGAAGACTGGCTCCTaGGAAAGAGAGGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNRKTGS*EREEME
Trigger: TTCCATCTCCTCTCTTTCTCAGGAGCCAGTCTTCCT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCCTTGCAAGTGGCTTTaGAAAGCTCAATTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYPCKWL*KAQFPA
Trigger: AGCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACCTTGCAAGTGGCTTTaGAAAGCTCAATTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLPCKWL*KAQFPA
Trigger: AGCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGTTAAGTTTGCTGAATaGCCCAGCCTCGATGGCACT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLVKFAE*PSLDGT
Trigger: AGTGCCATCGAGGCTGGGGCATTCAGCAAACTTAAC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTGAAGTAAGTCACAAGTaGAATTCCATGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIAEVSHK*NSMDFP
Trigger: AGGAAAATCCATGGAATTGCACTTGTGACTTACTTC...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCTGGTCGGTTTGGGCTaGAGGTCAGAGATATTAGTG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYLVGLG*RSEILV
Trigger: CACTAATATCTCTGACCTGCAGCCCAAACCGACCAG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTCTCTTGGTGTGGCCTaGTTTTCTAGCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNSLGVA*FSSSSV
Trigger: CACTGAGCTGCTAGAAAAGCAGGCCACACCAAGAGA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTGGTTGGGTTTTGACTaGCCCACAAAGCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTWLGFD*PTKHFL
Trigger: CAGGAAATGCTTTGTGGGGCAGTCAAAACCCAACCA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGGAGGTCTTCGTTCCTaGCTGTCCTTGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLGGLRS*LSLRVH
Trigger: GTGGACTCTCAAGGACAGGCAGGAACGAAGACCTCC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGAACAGAATGACCCTTaGTTCTCCCCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYEQNDP*FSPSPS
Trigger: GGAAGGAGAAGGGGAGAAGCAAGGGTCATTCTGTTC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAAGAGTGGGGTGTGTGTaGATGCACCAATGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLRVGCV*MHQCVC
Trigger: ACAGACACATTGGTGCATGCACACACACCCCACTCT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATTGCTACAGGACTGGTaGCCCACTTGCCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQALLQDW*PTCQLL
Trigger: TAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATGTGGTGTGCCTCTTTaGTACAGGACTGGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQACGVPL*YRTGAP
Trigger: TGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACTCTCACCTACACAATaGCTATGGAGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLLSPTQ*LWRAGV
Trigger: CACCCCTGCCCTCCATAGGCATTGTGTAGGTGAGAG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGGCAGGAGAAGCTCCTaGAGAGGGGTTTCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLGRRSS*RGVSQG
Trigger: TCCTTGAGAAACCCCTCTGCAGGAGCTTCTCCTGCC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAAGCGGAACACATTGCTaGGCAGTGAAAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLSGTHC*AVKAEG
Trigger: ACCTTCTGCTTTCACTGCCCAGCAATGTGTTCCGCT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGTAGGTGACAGCCTTTaGACGTGGGTGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAVGDSL*TWVSAW
Trigger: CCATGCTGACACCCACGTCCAAAGGCTGTCACCTAC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTTTCGGAGCCCTGGTTaGGTTGAGAGCAGGATTCAT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNFRSPG*VESRIH
Trigger: ATGAATCCTGCTCTCAACCCAACCAGGGCTCCGAAA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATTTCGGAGCCCTGGTTaGGTTGAGAGCAGGATTCAT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLFRSPG*VESRIH
Trigger: ATGAATCCTGCTCTCAACCCAACCAGGGCTCCGAAA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTGACGATTTCTCATTTTaGGCGGCCGGCTGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIDDFSF*AAGWLS
Trigger: CGAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTC...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAACAGGAGACTTGGTCTaGTACACCATGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLTGDLV*YTMMGP
Trigger: TGGACCCATCATGGTGTACCAGACCAAGTCTCCTGT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTTGGACTGGTCGGTTTaGGCTGCAGGTCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNLDWSV*AAGQRY
Trigger: ATATCTCTGACCTGCAGCCCAAACCGACCAGTCCAA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAAGAGTTTCTTTGGACTaGTCGGTTTGGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLRVSLD*SVWAAG
Trigger: ACCTGCAGCCCAAACCGACCAGTCCAAAGAAACTCT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATCTGACCCACAGGTaGGGGGATATAGTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYHLTHR*GDIVVD
Trigger: GTCTACAACTATATCCCCCCACCTGTGGGTCAGATG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATATTCAGAGAGAAAGGTaGAGGTGGTTGGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNIQRER*RWLGAH
Trigger: ATGAGCCCCCAACCACCTCCACCTTTCTCTCTGAAT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATGAGAAAAGAGGAAGCTaGTGCAGGAAGACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHEKRGS*CRKTGS
Trigger: GGAGCCAGTCTTCCTGCACCAGCTTCCTCTTTTCTC...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATAAAGACAGTGCGAGGTaGGGGTTACTCACACATCAG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNKDSAR*GLLTHQ
Trigger: CTGATGTGTGAGTAACCCCCACCTCGCACTGTCTTT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACAGCCTCGATGGCACTaGTGTAATTGTAGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLQPRWH*CNCSRP
Trigger: AGGCCGACTACAATTACATCAGTGCCATCGAGGCTG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATTAGCCTATTCCCCCTaGGGTCTAAGTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQALAYSP*GLSGSA
Trigger: TGCTGACCCACTTAGACCTCAGGGGGAATAGGCTAA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTGTCTAGCCAGGCCTTaGGAGGAAGTAAGTCACAAG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHCLARP*EEVSHK
Trigger: CTTGTGACTTACTTCCTCTCAAGGCCTGGCTAGACA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATACTTTGCCTGTCCTTTaGCACAGTCACTCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHTLPVL*HSHSRS
Trigger: ACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTGGTCTGGTACACCATaGTGGGTCCAAAACTTTGCC +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHWSGTP*WVQNFA
Trigger: GGCAAAGTTTTGGACCCATCATGGTGTACCAGACCA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGTAAAGGCACCTTCCTaGATGACTGCAATCCTGTTG +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLVKAPS*MTAILL
Trigger: CAACAGGATTGCAGTCATTCAGGAAGGTGCCTTTAC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACGCTCAGCAATATTTTaGTACAGCAGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLRSAIF*YSSSGS
Trigger: AGAGCCTGAGCTGCTGTATCAAAATATTGCTGAGCG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCGGAGCAGCATCCTCTaGTGCCTTAGGGTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHRSSIL*CLRVVN
Trigger: ATTTACAACCCTAAGGCATCAGAGGATGCTGCTCCG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCACTTGAGAACAGAATaGCCCTTGCTTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHHLRTE*PLLLPF
Trigger: GAAGGGGAGAAGCAAGGGTCATTCTGTTCTCAAGTG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCAGGGAAAAGGAGTTaGCCAAATGATGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHPGKRS*PNDVPV
Trigger: GACAGGCACATCATTTGGTCAACTCCTTTTCCCTGG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATTCCTTTCTGGGTGGTaGCCCACCAAACATATTTGC +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLFLSGW*PTKHIC
Trigger: GCAAATATGTTTGGTGGGTCACCACCCAGAAAGGAA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATGTTAAGTTTGCTGAATaGCCCAGCCTCGATGGCACT +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHVKFAE*PSLDGT
Trigger: AGTGCCATCGAGGCTGGGGCATTCAGCAAACTTAAC...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACAAAGCGGAACACATTaGTGGGCAGTGAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLQSGTH*WAVKAE
Trigger: TTCTGCTTTCACTGCCCAGCAATGTGTTCCGCTTTG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGTCACGTCTTTCCCATaGAACCTAAAGGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYVTSFP*NLKGVS
Trigger: TGAGACTCCCTTTAGGTTGCATGGGAAAGACGTGAC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGACTGTTGTTTCCTAAGTaGAGTAAGTCCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRLLFPK*SKSKEL
Trigger: CAGTTCTTTGGACTTACTGCACTTAGGAAACAACAG...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAGTATCTCCCCTGCATaGTTAGCAGGAGATTCGCAA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYSISPA*LAGDSQ
Trigger: TTGCGAATCTCCTGCTAAGCATGCAGGGGAGATACT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGATCACAGCTGACTGATTaGAGTTTGTTTTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRSQLTD*SLFFQN
Trigger: GTTCTGGAAAAACAAACTGCAATCAGTCAGCTGTGA...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAGGCTGGAACCATTTTaGTGTGCTGATGCTCATACG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYRLEPF*CADAHT
Trigger: CGTATGAGCATCAGCACAGCAAAATGGTTCCAGCCT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTCCTTACTCACCAGCTaGTGGAGAGAACTAACAAGG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNSLLTS*WRELTR
Trigger: CCTTGTTAGTTCTCTCCAGCAGCTGGTGAGTAAGGA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATTGAAATGGGTTGGCTaGTCAGACTGTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLLKWVG*SDCSGL
Trigger: CAGTCCTGAACAGTCTGAGCAGCCAACCCATTTCAA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATTCCCGGAGTCCCACTaGCTGGCCAAATGTGGAATA +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLFPESH*LAKCGI
Trigger: TATTCCACATTTGGCCAGGCAGTGGGACTCCGGGAA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGGGGTAAATAATGTCTaGTGTTGCCTGGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNGVNNV*CCLERP
Trigger: AGGCCTTTCCAGGCAACAGCAGACATTATTTACCCC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAGATGGGAAAGACAGTaGGAGGTGGGGGTTACTCAC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLRWERQ*EVGVTH
Trigger: GTGAGTAACCCCCACCTCGCACTGTCTTTCCCATCT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTGTGCCACTAGCTTCTaGATCTTCCTGTGTCCATCG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHCATSF*IFLCPS
Trigger: CGATGGACACAGGAAGATCCAGAAGCTAGTGGCACA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTCCCTTCCTTGCAAGTaGCTTTGCAAAGCTCAATTC +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTSLPCK*LCKAQF
Trigger: GAATTGAGCTTTGCAAAGCCACTTGCAAGGAAGGGA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACATCTCCTCCTCCCCTaGGGTATCTCGAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLHLLLP*GISKRS
Trigger: AGATCTCTTCGAGATACCCCAGGGGAGGAGGAGATG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGCGGAACACATTGCTaGGCAGTGAAAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHSGTHC*AVKAEG
Trigger: ACCTTCTGCTTTCACTGCCCAGCAATGTGTTCCGCT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTTACGTCTAAGTTGTTaGTATTCCTGGGAACGCTCG +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTLRLSC*YSWERS
Trigger: CGAGCGTTCCCAGGAATACCAACAACTTAGACGTAA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCCTTCTGCATGTAGATaGGGTTTTGGCACATCTGAC +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYPSACR*GFGTSD
Trigger: GTCAGATGTGCCAAAACCCCATCTACATGCAGAAGG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTCAGGCTCTCTTGGTGTaGCCTGCTTTTCTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIQALLV*PAFLAA
Trigger: AGCTGCTAGAAAAGCAGGCCACACCAAGAGAGCCTG...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGCTTGCAGTAAAGGGTaGTTGGGTTTTGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLACSKG*LGFDCP
Trigger: GGGGCAGTCAAAACCCAACCACCCTTTACTGCAAGC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTAGTAGTGATACCCAGTaGCTATACTCGGTAACTGAC +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTSSDTQ*LYSVTD
Trigger: GTCAGTTACCGAGTATAGCCACTGGGTATCACTACT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGATCAATTTTGTTGAAATaGGTTGGCTGCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRSILLK*VGCSDC
Trigger: ACAGTCTGAGCAGCCAACCCATTTCAACAAAATTGA...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAAAGGTGGAGGTGGTTaGGGGCTCATGAGATTCTTG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHKGGGG*GLMRFL
Trigger: CAAGAATCTCATGAGCCCCCAACCACCTCCACCTTT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATATGGAAAAGGAATCCTaGCCTGAGACCGAGCTTACC +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHMEKES*PETELT
Trigger: GGTAAGCTCGGTCTCAGGCCAGGATTCCTTTTCCAT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370490.1
3UTR CAA 72 bp CAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATaGCTTGATAGCTCAATTCACATCAGACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QTVQDCYCAMIA*LDSSIHIRLQK
Trigger: CTTCTGAAGTCTGATGTGAATTGAGCTATCAAGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTACTTTGCCTGTCCTTTaGCACAGTCACTCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEITLPVL*HSHSRS
Trigger: ACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGT...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATGTAAAGGCACCTTCCTaGATGACTGCAATCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHVKAPS*MTAILL
Trigger: CAACAGGATTGCAGTCATTCAGGAAGGTGCCTTTAC...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCGCTCAGCAATATTTTaGTACAGCAGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHRSAIF*YSSSGS
Trigger: AGAGCCTGAGCTGCTGTATCAAAATATTGCTGAGCG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAGGGTGGTTGGGTTTTaGCTGCCCCACAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLRVVGF*LPHKAF
Trigger: AAATGCTTTGTGGGGCAGTCAAAACCCAACCACCCT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGATATCATTGCATCAAATaGGAGCAGTCAGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRYHCIK*EQSEKD
Trigger: ATCCTTTTCTGACTGCTCTCATTTGATGCAATGATA...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGTATCTCCCCTGCATaGTTAGCAGGAGATTCGCAA +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHSISPA*LAGDSQ
Trigger: TTGCGAATCTCCTGCTAAGCATGCAGGGGAGATACT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGATTGCGGCTTAGCTTaGAGTAAAGGGTGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLDCGLA*SKGWLG
Trigger: ACCCAACCACCCTTTACTGCAAGCTAAGCCGCAATC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGAAAAGGAAACAGTGTaGTTCTTTCAGACGCCATCG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNEKETV*FFQTPS
Trigger: CGATGGCGTCTGAAAGAAGCACACTGTTTCCTTTTC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCCTCCCACCCTGTATTaGAATTGCATCATTAGATGG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYPPTLY*NCIIRW
Trigger: CCATCTAATGATGCAATTGCAATACAGGGTGGGAGG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACAAAACACTTCAGCTTaGTTTCCCGGAGTCCCACTG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLQNTSA*FPGVPL
Trigger: CAGTGGGACTCCGGGAAAGCAAGCTGAAGTGTTTTG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATGTGTGTGTGTGGTGTaGCTCTTTGCTACAGGACTG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLCVCVV*LFATGL
Trigger: CAGTCCTGTAGCAAAGAGGCACACCACACACACACA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTCCCTTCCTTGCAAGTaGCTTTGCAAAGCTCAATTC +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNSLPCK*LCKAQF
Trigger: GAATTGAGCTTTGCAAAGCCACTTGCAAGGAAGGGA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATCTGACTGGAATCACTaGCACTTTTTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLSDWNH*HFFWDR
Trigger: TCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAGTCACTCGAGGAGTTaGACGATTTCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYSHSRS*TISHFG
Trigger: CCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTACAGGAGACTTGGTCTaGTACACCATGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEITGDLV*YTMMGP
Trigger: TGGACCCATCATGGTGTACCAGACCAAGTCTCCTGT...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACATCTGACCCACAGGTaGGGGGATATAGTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAHLTHR*GDIVVD
Trigger: GTCTACAACTATATCCCCCCACCTGTGGGTCAGATG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTTTGTTGAAATGGGTTaGCTGCTCAGACTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNFVEMG*LLRLFR
Trigger: CCTGAACAGTCTGAGCAGCCAACCCATTTCAACAAA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGATGGAATATGTGCTTATaGAATACCCTCTACTGTAAC +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRWNMCL*NTLYCN
Trigger: GTTACAGTAGAGGGTATTCCATAAGCACATATTCCA...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAGAGAAAGGTGGAGGTaGTTGGGGGCTCATGAGATT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLRERWR*LGAHEI
Trigger: AATCTCATGAGCCCCCAACCACCTCCACCTTTCTCT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTGTGCCACTAGCTTCTaGATCTTCCTGTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHCATSF*IFLCPS
Trigger: AGATGGACACAGGAAGATCCAGAAGCTAGTGGCACA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCTGCTTTTTGTTGGTTaGTTTAATTTGACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTLLFVG*FNLTGG
Trigger: ACCCCCAGTCAAATTAAATCAACCAACAAAAAGCAG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCAGCTGAATCTCCATaGTCCCTCCAATATGTTCAA +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHPAESP*SLQYVQ
Trigger: TTGAACATATTGGAGGGATCATGGAGATTCAGCTGG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAAGGCACCTTCCTGAATaGCTGCAATCCTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQARHLPE*LQSCCF
Trigger: GAAACAACAGGATTGCAGTCATTCAGGAAGGTGCCT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACCTTTCACGGGCAGGTaGGAAAAATGGTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAPFTGR*EKWLFL
Trigger: GAGAAACAACCATTTTTCTCACCTGCCCGTGAAAGG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGACCCATACTGTAATTaGAAGGAGCTTACGTCTAAG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYDPYCN*KELTSK
Trigger: CTTAGACGTAAGCTCCTTTCAATTACAGTATGGGTC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTATTTCCCTTCACAGCTaGCTGATTGCAGTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTISLHS*LIAVCF
Trigger: AAAACAAACTGCAATCAGTCAGCTGTGAAGGGAAAT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGACGCAAATAGTACTTaGTTTGATAGCACCCCATTA +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTDANST*FDSTPL
Trigger: TAATGGGGTGCTATCAAATCAAGTACTATTTGCGTC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAAGGAGTTGACCAAATaGTGTGCCTGTCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHKELTK*CACPTK
Trigger: TTTTGTGGGACAGGCACATCATTTGGTCAACTCCTT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTTACATACAGAGCCCTaGTTCAGTGCTAAGAGAATT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTLHTEP*FSAKRI
Trigger: AATTCTCTTAGCACTGAATCAGGGCTCTGTATGTAA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGATGCTTCCCTTCCTTaGAAGTGGCTTTGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQADASLP*KWLCKA
Trigger: AGCTTTGCAAAGCCACTTGCAAGGAAGGGAAGCATC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGTCACGTCTTTCCCATaGAACCTAAAGGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAVTSFP*NLKGVS
Trigger: TGAGACTCCCTTTAGGTTGCATGGGAAAGACGTGAC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGAACTTTATGGAATATGTaGTTATGGAATACCCTCTAC +
Preference number: 4 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRTLWNM*LWNTLY
Trigger: GTAGAGGGTATTCCATAAGCACATATTCCATAAAGT...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGTTGACCAAATGATGTaGCTGTCCCACAAAACACTT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLVDQMM*LSHKTL
Trigger: AAGTGTTTTGTGGGACAGGCACATCATTTGGTCAAC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAATAATGTCTGCTGTTaGCTGGAAAGGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHNNVCC*LERPWL
Trigger: CAACCAAGGCCTTTCCAGGCAACAGCAGACATTATT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACTTCCTGTGTCCATCTaGAAAAGGCAGGTAGGTAGA +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLLPVSI*KRQVGR
Trigger: TCTACCTACCTGCCTTTTGCAGATGGACACAGGAAG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCCACCAAACATATTTaGCTGGACTCTGAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHPTKHI*LDSESQ
Trigger: CTGACTTTCAGAGTCCAGGCAAATATGTTTGGTGGG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGTCACTCGAGGAGTTaGACGATTTCTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHSHSRS*TISHFG
Trigger: CCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACCTTCTGCATGTAGATaGGGTTTTGGCACATCTGAC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAPSACR*GFGTSD
Trigger: GTCAGATGTGCCAAAACCCCATCTACATGCAGAAGG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATTTCTAGCAGCTCAGTaGCACTTATTGTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLFLAAQ*HLLCKQ
Trigger: CTGCTTACACAATAAGTGCCACTGAGCTGCTAGAAA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTGCAGAGAACTTACTTaGGAAGTTTTAATCTCACCC +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTCRELT*EVLISP
Trigger: GGGTGAGATTAAAACTTCCCAAGTAAGTTCTCTGCA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATTACTCACCAGCTGCTaGAGAGAACTAACAAGGCAC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLLLTSC*RELTRH
Trigger: GTGCCTTGTTAGTTCTCTCCAGCAGCTGGTGAGTAA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAAAGAGTCTTCCATTGTaGAATCAATTCGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLKSLPL*NQFARG
Trigger: ACCCCTTGCGAATTGATTCCACAATGGAAGACTCTT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACTGCTTTTTGTTGGTTaGTTTAATTTGACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLLLFVG*FNLTGG
Trigger: ACCCCCAGTCAAATTAAATCAACCAACAAAAAGCAG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCTTTGTTCTCACAGTTaGTATTCAGTACGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTLCSHS*YSVRFP
Trigger: AGGAAAACGTACTGAATATCAACTGTGAGAACAAAG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAATTTCCCTTCACAGCTaGCTGATTGCAGTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLISLHS*LIAVCF
Trigger: AAAACAAACTGCAATCAGTCAGCTGTGAAGGGAAAT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAACATTCATGTCCACTaGTGGTTCCTAAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYNIHVH*WFLRRE
Trigger: TTCTCTTCTTAGGAACCATCAGTGGACATGAATGTT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGCTATACTCGGTAACTaGCGATGGAAATACCATATA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYAILGN*RWKYHI
Trigger: TATATGGTATTTCCATCGTCAGTTACCGAGTATAGC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGCTATACTCGGTAACTaGCGATGGAAATACCATATA +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLAILGN*RWKYHI
Trigger: TATATGGTATTTCCATCGTCAGTTACCGAGTATAGC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGGAACAAATCAGCCTaGAACGCGATAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHRNKSA*NAITTL
Trigger: TAAAGTGGTTATCGCGTTTCAGGCTGATTTGTTCCT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGCCACCTGTAGCTGGTaGTCTGTGCATTATTTTCTT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLATCSW*SVHYFL
Trigger: AAGAAAATAATGCACAGATCACCAGCTACAGGTGGC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACTGTTGTTTCCTAAGTaGAGTAAGTCCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLLLFPK*SKSKEL
Trigger: CAGTTCTTTGGACTTACTGCACTTAGGAAACAACAG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGCACTTCAAGGTAATTaGCATTCAGATAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLALQGN*HSDKVC
Trigger: GCAGACTTTATCTGAATGGCAATTACCTTGAAGTGC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACTTAACTTCCTGCATTaGATTACTGTCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLLNFLH*ITVSTV
Trigger: AACAGTGGAGACAGTAATGCAATGCAGGAAGTTAAG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTCAGACTGTTCAGGACTaGTACTGTGCTATGATAGCA +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIQTVQD*YCAMIA
Trigger: TGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTG...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGTAGCTGGTGATCTGTaGATTATTTTCTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTVAGDL*IIFLSF
Trigger: AAAGCTCAAGAAAATAATGCACAGATCACCAGCTAC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATCTGACTGGAATCACTaGCACTTTTTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLSDWNH*HFFWDR
Trigger: TCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATTACGTCTAAGTTGTTaGTATTCCTGGGAACGCTCG +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQALRLSC*YSWERS
Trigger: CGAGCGTTCCCAGGAATACCAACAACTTAGACGTAA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAATTGCATCATTAGATaGAAGCAGTCTGATGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYNCIIR*KQSDAV
Trigger: CACTGCATCAGACTGCTTCCATCTAATGATGCAATT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTATCTTACAGCTCCTTaGACCCAAGAGTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHYLTAP*TQESSI
Trigger: AATGGAAGACTCTTGGGTCCAAGGAGCTGTAAGATA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAAAGAGAATTCCTTTCTaGGTGGTGACCCACCAAACA +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAKRIPF*VVTHQT
Trigger: TGTTTGGTGGGTCACCACCCAGAAAGGAATTCTCTT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATCTTTGTTCTCACAGTTaGTATTCAGTACGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNLCSHS*YSVRFP
Trigger: AGGAAAACGTACTGAATATCAACTGTGAGAACAAAG...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATCAAGAGGTTTCCATTaGGAAAAAGCTGATAGATTC +
Preference number: 4 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLSRGFH*EKADRF
Trigger: GAATCTATCAGCTTTTTCTCAATGGAAACCTCTTGA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACCGCGTTGGAGTAATTaGCAAATTCGTTTGGATACA +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAPRWSN*QIRLDT
Trigger: TGTATCCAAACGAATTTGTCAATTACTCCAACGCGG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGGTGTGTCTGTATTGTaGTTCATTGACAAGACGGTT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLGVSVL*FIDKTV
Trigger: AACCGTCTTGTCAATGAATCACAATACAGACACACC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGGTGTGTCTGTATTGTaGTTCATTGACAAGACGGTT +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAGVSVL*FIDKTV
Trigger: AACCGTCTTGTCAATGAATCACAATACAGACACACC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAAGCAAACTGTACGTTaGCTTAATATAGCTGACACA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYKQTVR*LNIADT
Trigger: TGTGTCAGCTATATTAAGTCAACGTACAGTTTGCTT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATATTATTAATCCTGACTaGGGTGGCTTATTACCTCTA +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNIINPD*GGLLPL
Trigger: TAGAGGTAATAAGCCACCTCAGTCAGGATTAATAAT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATATTATTAATCCTGACTaGGGTGGCTTATTACCTCTA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYIINPD*GGLLPL
Trigger: TAGAGGTAATAAGCCACCTCAGTCAGGATTAATAAT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAATGGTCGAAAGTGCTTaGGCAGATAAAGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAMVESA*ADKAKQ
Trigger: CTGTTTTGCTTTATCTGCTCAAGCACTTTCGACCAT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTACCATTTTGCTGTGCTaGTGCTCATACGTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEITILLC*CSYVLK
Trigger: CTTTAAGACGTATGAGCATCAGCACAGCAAAATGGT...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTTTGCACAATCATTGTaGGAAGCAAAGTACACCTAT +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYFAQSL*EAKYTY
Trigger: ATAGGTGTACTTTGCTTCTCACAATGATTGTGCAAA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR TCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATATGTCAATATTTAACTaGAGTAAAGACGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNMSIFN*SKDVRA
Trigger: GGCTCTCACGTCTTTACTTCAGTTAAATATTGACAT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAATACAACAAACCACTTaGGAACAGAATGACCCTTGC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAIQQTT*EQNDPC
Trigger: GCAAGGGTCATTCTGTTCTCAAGTGGTTTGTTGTAT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGCAACACGGCAGAATaGAATCATTGCATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHSNTAE*NHCIFQ
Trigger: TTGGAAAATGCAATGATTTCATTCTGCCGTGTTGCT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAACAGACAGCGGATCTTaGAAATGTCTTTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLTDSGS*KCLWQF
Trigger: AAACTGCCAAAGACATTTGCAAGATCCGCTGTCTGT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTTGTTGTTGTTGAGATaGAGTCTTTTGAGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTLLLLR*SLLRVF
Trigger: GAAAACTCTCAAAAGACTGCATCTCAACAACAACAA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGAAGTAAGTCACAAGTaGAATTCCATGGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNEVSHK*NSMDFP
Trigger: AGGAAAATCCATGGAATTGCACTTGTGACTTACTTC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATAGATATTGCAAGCTCTaGAGTCCATCAAACATAGAA +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNRYCKL*SPSNIE
Trigger: TTCTATGTTTGATGGACTGCAGAGCTTGCAATATCT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTAACTCAAGAGGAAAATaGTGTTTTGTCAGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SLPILSSVTIISSSHSHTNSRGK*CFVRKC
Trigger: ACACTTTCTGACAAAACAGCATTTTCCTCTTGAGTT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATTGAGAGTCCACAGCTaGTTTCCAAAACGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQALRVHS*FPKRSY
Trigger: GTAACTACGTTTTGGAAAGCAGCTGTGGACTCTCAA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTTCTTGCAAATGTCTTTaGCAGTTTTGCGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEISCKCL*QFCDSL
Trigger: CAGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGA...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATCTTGCAAATGTCTTTaGCAGTTTTGCGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQASCKCL*QFCDSL
Trigger: CAGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTTTTCTAGCAGCTCAGTaGCACTTATTGTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIFLAAQ*HLLCKQ
Trigger: CTGCTTACACAATAAGTGCCACTGAGCTGCTAGAAA...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACCAAACATATTTGCCTaGACTCTGAAAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAPNIFA*TLKVSS
Trigger: TGAGCTGACTTTCAGAGTCCAGGCAAATATGTTTGG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGGTTCATTTTACAGATaGGGTCATTTCTTAACCAGG +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAGSFYR*GHFLTR
Trigger: CCTGGTTAAGAAATGACCTCATCTGTAAAATGAACC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACATTCAGATAAAGTCTaGGTAAACTGGTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLHSDKV*VNWSGL
Trigger: CAAACCTGACCAGTTTACGCAGACTTTATCTGAATG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATCACAGCTGACTGATTaGAGTTTGTTTTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLSQLTD*SLFFQN
Trigger: GTTCTGGAAAAACAAACTGCAATCAGTCAGCTGTGA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGTAATGTACTTAAAGTaGGAAGGCACTTTAACACAA +
Preference number: 4 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYVMYLK*EGTLTQ
Trigger: TTGTGTTAAAGTGCCTTCGCACTTTAAGTACATTAC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTATGAGCATGTTAGCTTaGCACTGTAGATATTCAGAG +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIMSMLA*HCRYSE
Trigger: CTCTGAATATCTACAGTGGCAAGCTAACATGCTCAT...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAACCCTGTATTGCAATTaGATCATTAGATGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQATLYCN*IIRWKQ
Trigger: CTGCTTCCATCTAATGATGCAATTGCAATACAGGGT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CCA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATATTGACAAATTCGTTTaGATACAGTCTTGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNIDKFV*IQSCQE
Trigger: CTCTTGACAAGACTGTATCCAAACGAATTTGTCAAT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTTATTGATTCTGTCTTaGTTTTGGCGTCGAGATTCA +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHLLILS*FWRRDS
Trigger: TGAATCTCGACGCCAAAACCAAGACAGAATCAATAA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACTAATGGCCAGGTGTTaGATTTTTGCCTTCATTATC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLLMARC*IFAFII
Trigger: GATAATGAAGGCAAAAATCCAACACCTGGCCATTAG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATCAAGAGGTTTCCATTaGGAAAAAGCTGATAGATTC +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLSRGFH*EKADRF
Trigger: GAATCTATCAGCTTTTTCTCAATGGAAACCTCTTGA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR TCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTGCAGTAACCTATTTATaGAAAGGAAACAGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIAVTYL*KGNSVL
Trigger: AAGCACACTGTTTCCTTTTCATAAATAGGTTACTGC...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTTGTTGTTGTTGAGATaGAGTCTTTTGAGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHLLLLR*SLLRVF
Trigger: GAAAACTCTCAAAAGACTGCATCTCAACAACAACAA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTAGATATTGCAAGCTCTaGAGTCCATCAAACATAGAA +
Preference number: 4 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIRYCKL*SPSNIE
Trigger: TTCTATGTTTGATGGACTGCAGAGCTTGCAATATCT...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGATCACCATCCCAGTTaGATAAGGATTTACAATAGA +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLDHHPS*IRIYNR
Trigger: TCTATTGTAAATCCTTATGCAACTGGGATGGTGATC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR GCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATTACACGTGACTTTTTaGACAATCATTGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQALHVTF*TIIVRS
Trigger: GCTTCTCACAATGATTGTGCAAAAAGTCACGTGTAA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATATTGACAAATTCGTTTaGATACAGTCTTGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHIDKFV*IQSCQE
Trigger: CTCTTGACAAGACTGTATCCAAACGAATTTGTCAAT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR GCA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATGGAAGGGCATTAATTaGTCAATTCACTCTGATATT +
Preference number: 4 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLWKGIN*SIHSDI
Trigger: AATATCAGAGTGAATTGAGCAATTAATGCCCTTCCA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CCA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACCTCTAATTCTTGCTTaGCGTTTAGCAAAATACTTT +
Preference number: 4 (lower is better)
Translates to: KVLELESFDDRLVSITQAPLILA*RLAKYF
Trigger: AAAGTATTTTGCTAAACGCCAAGCAAGAATTAGAGG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
3UTR CAA 72 bp AAGAGGAAAATGCTGTTTTGTCAGAAAGTGTTAAACTaGAGAAGGATTATGAGTCTAACCCGTGATCTAAAA +
Preference number: 4 (lower is better)
Translates to: KRKMLFCQKVLN*RRIMSLTRDLK
Trigger: TTTTAGATCACGGGTTAGACTCATAATCCTTCTCAAGTTTAACACTTTCTGACAAAACAGCATTTTCCTCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS CCA 90 bp GCCGACCGGAGGCTTCTAGCTCGCGCCGGGTGCGTGGGCCCTCCCTaGCCGCCTGTGCCACCCCGCTGCGCGAGGCGCGGAGCCCGACCA +
Preference number: 5 (lower is better)
Translates to: ADRRLLARAGCVGPP*PPVPPRCARRGARP
Trigger: TGGTCGGGCTCCGCGCCTCGCGCAGCGGGGTGGCACAGGCGGCCAGGGAGGGCCCACGCACCCGGCGCGAGCTAGAAGCCTCCGGTCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp ACTTGGGCACTGCAGGCCGACCGGAGGCTTCTAGCTCGCGCCGGGTaGGTGGGCCCTCCCTGGCCGCCTGTGCCACCCCGCTGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: TWALQADRRLLARAG*VGPPWPPVPPRCAR
Trigger: CCTCGCGCAGCGGGGTGGCACAGGCGGCCAGGGAGGGCCCACGCACCCGGCGCGAGCTAGAAGCCTCCGGTCGGCCTGCAGTGCCCAAGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp GCGAGCGCGCCGCCCAGATCTTTTCCCGGAGGCGCCCGCAGCATCTaGGACTCGGGGAGGCAAAGGAGCCGGCACCGCCTCGGACTGGCG +
Preference number: 5 (lower is better)
Translates to: ASAPPRSFPGGARSI*DSGRQRSRHRLGLA
Trigger: CGCCAGTCCGAGGCGGTGCCGGCTCCTTTGCCTCCCCGAGTCGCAGATGCTGCGGGCGCCTCCGGGAAAAGATCTGGGCGGCGCGCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS GCA 90 bp GCGGTGCCCGGCATGCGGACCTACAGCCGCGACGGCCACTCGGGCTaGCCTCGCCATGGGACTTGGGCACTGCAGGCCGACCGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: AVPGMRTYSRDGHSG*PRHGTWALQADRRL
Trigger: AAGCCTCCGGTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGGGCAGCCCGAGTGGCCGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp CCTTCCCTGCCCCTACCTGCTAGACGCCTGGTGCGGTGCCCGGCATaGGGACCTACAGCCGCGACGGCCACTCGGGCTGCCCTCGCCATG +
Preference number: 5 (lower is better)
Translates to: PSLPLPARRLVRCPA*GPTAATATRAALAM
Trigger: CATGGCGAGGGCAGCCCGAGTGGCCGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGGCAGGGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp GCAGCCCTACCTTCCCTGCCCCTACCTGCTAGACGCCTGGTGCGGTaGCCGGCATGCGGACCTACAGCCGCGACGGCCACTCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AALPSLPLPARRLVR*PACGPTAATATRAA
Trigger: GGCAGCCCGAGTGGCCGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGGCAGGGAAGGTAGGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp CCAGCGCAGCCCTACCTTCCCTGCCCCTACCTGCTAGACGCCTGGTaGGGTGCCCGGCATGCGGACCTACAGCCGCGACGGCCACTCGGG +
Preference number: 5 (lower is better)
Translates to: PAQPYLPCPYLLDAW*GARHADLQPRRPLG
Trigger: CCCGAGTGGCCGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGGCAGGGAAGGTAGGGCTGCGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp TCGCCGGTAACTGGGCACCGGCCGCCAGCGCAGCCCTACCTTCCCTaGCCCTACCTGCTAGACGCCTGGTGCGGTGCCCGGCATGCGGAC +
Preference number: 5 (lower is better)
Translates to: SPVTGHRPPAQPYLP*PYLLDAWCGARHAD
Trigger: GTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGGCAGGGAAGGTAGGGCTGCGCTGGCGGCCGGTGCCCAGTTACCGGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp GAGAGCCGGCTGGCCCGGTCGGCGGGCGAAGGCGACGACGGAGCCTaGGCGCGCGTTTCCAATTCGGTGGCGGTGGCAGCAGTGCGTCTA +
Preference number: 5 (lower is better)
Translates to: ESRLARSAGEGDDGA*ARVSNSVAVAAVRL
Trigger: TAGACGCACTGCTGCCACCGCCACCGAATTGGAAACGCGCGCCCAGGCTCCGTCGTCGCCTTCGCCCGCCGACCGGGCCAGCCGGCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 90 bp ACCTACAGCCGCGACGGCCACTCGGGCTGCCCTCGCCATGGGACTTaGGCACTGCAGGCCGACCGGAGGCTTCTAGCTCGCGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: TYSRDGHSGCPRHGT*ALQADRRLLARAGC
Trigger: GCACCCGGCGCGAGCTAGAAGCCTCCGGTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGGGCAGCCCGAGTGGCCGTCGCGGCTGTAGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp CCGCCAGCGCAGCCCTACCTTCCCTGCCCCTACCTGCTAGACGCCTaGTGCGGTGCCCGGCATGCGGACCTACAGCCGCGACGGCCACTC +
Preference number: 5 (lower is better)
Translates to: PPAQPYLPCPYLLDA*CGARHADLQPRRPL
Trigger: GAGTGGCCGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGGCAGGGAAGGTAGGGCTGCGCTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp CATGCGGACCTACAGCCGCGACGGCCACTCGGGCTGCCCTCGCCATaGGACTTGGGCACTGCAGGCCGACCGGAGGCTTCTAGCTCGCGC +
Preference number: 5 (lower is better)
Translates to: HADLQPRRPLGLPSP*DLGTAGRPEASSSR
Trigger: GCGCGAGCTAGAAGCCTCCGGTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGGGCAGCCCGAGTGGCCGTCGCGGCTGTAGGTCCGCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp TTCCGGGAGACCAGGTGTCTCCGAGCGTCCCCGATCGCCGGTAACTaGGCACCGGCCGCCAGCGCAGCCCTACCTTCCCTGCCCCTACCT +
Preference number: 5 (lower is better)
Translates to: FRETRCLRASPIAGN*APAASAALPSLPLP
Trigger: AGGTAGGGGCAGGGAAGGTAGGGCTGCGCTGGCGGCCGGTGCCCAGTTACCGGCGATCGGGGACGCTCGGAGACACCTGGTCTCCCGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp CGAGTAGAGCCTGGCTCAGGTCTCCAAGCCTTCCACAGGACACGGTaGGTGCCGGCGGGCTTACAGCCCACCTCCGTCCCGGCCGCCCAT +
Preference number: 5 (lower is better)
Translates to: RVEPGSGLQAFHRTR*VPAGLQPTSVPAAH
Trigger: ATGGGCGGCCGGGACGGAGGTGGGCTGTAAGCCCGCCGGCACCCACCGTGTCCTGTGGAAGGCTTGGAGACCTGAGCCAGGCTCTACTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp GGGAGGGGGCAGGCAGAGGATCCAGGGCGCGCGGTGGGGGAGGGTTaGGCAGATGCTTCCCTTCCTTGCAAGTGGCTTTGCAAAGCTCAA +
Preference number: 5 (lower is better)
Translates to: GRGQAEDPGRAVGEG*ADASLPCKWLCKAQ
Trigger: TTGAGCTTTGCAAAGCCACTTGCAAGGAAGGGAAGCATCTGCCCAACCCTCCCCCACCGCGCGCCCTGGATCCTCTGCCTGCCCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 90 bp AGTGGGTGTCAGAAAAGCACTGCCAGGCTGAGCCTCAGCTGGGAGTaGGAGCCAAAGGAAGGGTGGTTGAGCCCTCCAGGCTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SGCQKSTARLSLSWE*EPKEGWLSPPGCRG
Trigger: GCCCCTGCAGCCTGGAGGGCTCAACCACCCTTCCTTTGGCTCCCACTCCCAGCTGAGGCTCAGCCTGGCAGTGCTTTTCTGACACCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp CCAGGGCGCGCGGTGGGGGAGGGTTGGGCAGATGCTTCCCTTCCTTaGAAGTGGCTTTGCAAAGCTCAATTCCCGGCTGCGTCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: PGRAVGEGWADASLP*KWLCKAQFPAASVD
Trigger: ATCAACTGACGCAGCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGGAAGGGAAGCATCTGCCCAACCCTCCCCCACCGCGCGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 90 bp GGCTTTCGGAGCCCTGGTTGGGTTGAGAGCAGGATTCATTGTAGGTaGCAGCCTTTGGACGTGGGTGTCAGCATGGCTGCCCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: GFRSPGWVESRIHCR*QPLDVGVSMAAPLT
Trigger: AGTCAGAGGGGCAGCCATGCTGACACCCACGTCCAAAGGCTGTCACCTACAATGAATCCTGCTCTCAACCCAACCAGGGCTCCGAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 90 bp GTGTGTGTGTGGTGTGCCTCTTTGCTACAGGACTGGTGCCCCACTTaGCAGCTCCTAGCTCAGATGCTCTCTGTGCAGAGAGTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: VCVWCASLLQDWCPT*QLLAQMLSVQRVGC
Trigger: ACACCCCACTCTCTGCACAGAGAGCATCTGAGCTAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp CGCGCGGTGGGGGAGGGTTGGGCAGATGCTTCCCTTCCTTGCAAGTaGCTTTGCAAAGCTCAATTCCCGGCTGCGTCAGTTGATTCTGAA +
Preference number: 5 (lower is better)
Translates to: RAVGEGWADASLPCK*LCKAQFPAASVDSE
Trigger: TTCAGAATCAACTGACGCAGCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGGAAGGGAAGCATCTGCCCAACCCTCCCCCACCGCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTCGCGGTGGGGGAGGGTaGGGCAGATGCTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIARGGGG*GRCFPS
Trigger: GGAAGGGAAGCATCTGCCCAACCCTCCCCCACCGCG...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS TCA 90 bp CTCCCCTGGGGTATCTCGAAGAGATCTCGGGCAGCTCGCCCGTCTTaGGCTCCCAGCAGAAATCGCAATCGACATCAGGAGAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: LPWGISKRSRAARPS*APSRNRNRHQEKTE
Trigger: TTCAGTCTTCTCCTGATGTCGATTGCGATTTCTGCTGGGAGCTCAAGACGGGCGAGCTGCCCGAGATCTCTTCGAGATACCCCAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS TCA 90 bp GTAGGTGACAGCCTTTGGACGTGGGTGTCAGCATGGCTGCCCCTCTaGCTGGAATCACTGGCACTTTTTCTGGGACAGAGGTCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: VGDSLWTWVSAWLPL*LESLALFLGQRSCL
Trigger: CAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGAGGGGCAGCCATGCTGACACCCACGTCCAAAGGCTGTCACCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 90 bp TTTGGACGTGGGTGTCAGCATGGCTGCCCCTCTGACTGGAATCACTaGCACTTTTTCTGGGACAGAGGTCTTGCCTGGTCAGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: FGRGCQHGCPSDWNH*HFFWDRGLAWSAGS
Trigger: TGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGAGGGGCAGCCATGCTGACACCCACGTCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 90 bp AGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTaGCTCTTTGCTACAGGACTGGTGCCCCACTTGCCAGCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: RERECVCVCVCVCVV*LFATGLVPHLPAPS
Trigger: GCTAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACACACACACACACACACACACACTCTCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp TGTCAGCATGGCTGCCCCTCTGACTGGAATCACTGGCACTTTTTCTaGGACAGAGGTCTTGCCTGGTCAGCTGGGTCACGTCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: CQHGCPSDWNHWHFF*DRGLAWSAGSRLSH
Trigger: ATGGGAAAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGAGGGGCAGCCATGCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 90 bp GAGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTGCCTCTTTGCTACAGGACTGGTGCCCCACTTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ERERESVCVCVCVCV*CASLLQDWCPTCQL
Trigger: GAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACACACACACACACACACACACACTCTCTCTCTCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCTCCCGGCTGCGTCAGTaGATTCTGAACTACTCCACC +
Preference number: 5 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIASRLRQ*ILNYST
Trigger: GGTGGAGTAGTTCAGAATCAACTGACGCAGCCGGGA...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS GCA 90 bp GTGGGGGAGGGTTGGGCAGATGCTTCCCTTCCTTGCAAGTGGCTTTaGAAAGCTCAATTCCCGGCTGCGTCAGTTGATTCTGAACTACTC +
Preference number: 5 (lower is better)
Translates to: VGEGWADASLPCKWL*KAQFPAASVDSELL
Trigger: GAGTAGTTCAGAATCAACTGACGCAGCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGGAAGGGAAGCATCTGCCCAACCCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 90 bp TCTGAGGCAGAGGGACAGCCCTGTGGATGGCCTCCCACCCTGTATTaGAATTGCATCATTAGATGGAAGCAGTCTGATGCAGTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SEAEGQPCGWPPTLY*NCIIRWKQSDAVGA
Trigger: TGCTCCCACTGCATCAGACTGCTTCCATCTAATGATGCAATTGCAATACAGGGTGGGAGGCCATCCACAGGGCTGTCCCTCTGCCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCCCTCGCCATGGGACTaGGGCACTGCAGGCCGACCG +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTPSPWD*GTAGRP
Trigger: CGGTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGGG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 90 bp TTTTGCGACTCTCTGTCTGTAAGATCCCGGCCACGGTTAACACACTaGGGAACCAAACGCCGCTCAGCATCTTTAGGCACCTTCGGTGTC +
Preference number: 5 (lower is better)
Translates to: FCDSLSVRSRPRLTH*GTKRRSASLGTFGV
Trigger: GACACCGAAGGTGCCTAAAGATGCTGAGCGGCGTTTGGTTCCTCAGTGTGTTAACCGTGGCCGGGATCTTACAGACAGAGAGTCGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCATCCTTGCAAGTGGCTTaGCAAAGCTCAATTCCCGGC +
Preference number: 5 (lower is better)
Translates to: FKHKPLATSKLVAQAALASLQVA*QSSIPG
Trigger: GCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGGA...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCAGATGCTTCCCTTCCTaGCAAGTGGCTTTGCAAAGC +
Preference number: 5 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIARCFPS*QVALQS
Trigger: GCTTTGCAAAGCCACTTGCAAGGAAGGGAAGCATCT...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCGCGGTGGGGGAGGGTaGGGCAGATGCTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTRGGGG*GRCFPS
Trigger: GGAAGGGAAGCATCTGCCCAACCCTCCCCCACCGCG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 90 bp CTGGGACAGAGGTCTTGCCTGGTCAGCTGGGTCACGTCTTTCCCATaGAACCTAAAGGGAGTCTCACAGACAATCTCTCCCACAAAAACA +
Preference number: 5 (lower is better)
Translates to: LGQRSCLVSWVTSFP*NLKGVSQTISPTKT
Trigger: TGTTTTTGTGGGAGAGATTGTCTGTGAGACTCCCTTTAGGTTGCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 90 bp GCAGAGGGACAGCCCTGTGGATGGCCTCCCACCCTGTATTGCAATTaGATCATTAGATGGAAGCAGTCTGATGCAGTGGGAGCACAATTA +
Preference number: 5 (lower is better)
Translates to: AEGQPCGWPPTLYCN*IIRWKQSDAVGAQL
Trigger: TAATTGTGCTCCCACTGCATCAGACTGCTTCCATCTAATGATGCAATTGCAATACAGGGTGGGAGGCCATCCACAGGGCTGTCCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp GAATCACTGGCACTTTTTCTGGGACAGAGGTCTTGCCTGGTCAGCTaGGTCACGTCTTTCCCATGCAACCTAAAGGGAGTCTCACAGACA +
Preference number: 5 (lower is better)
Translates to: ESLALFLGQRSCLVS*VTSFPCNLKGVSQT
Trigger: TGTCTGTGAGACTCCCTTTAGGTTGCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCAAACTTTGCCTGTCCTTaGACACAGTCACTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: FKHKPLATSKLVAQAALANFACP*TQSLEE
Trigger: CTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTT...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS TCA 90 bp GCTGCGTCAGTTGATTCTGAACTACTCCACCTCCAACCTGGGTTCTaGTCTGGCTCTGTTGCTAGATGTGCCACTAGCTTCTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: AASVDSELLHLQPGF*SGSVARCATSFWIF
Trigger: GAAGATCCAGAAGCTAGTGGCACATCTAGCAACAGAGCCAGATCAGAACCCAGGTTGGAGGTGGAGTAGTTCAGAATCAACTGACGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS GCA 90 bp GGCACAGGAGACTTGGTCTGGTACACCATGATGGGTCCAAAACTTTaGCTGTCCTTTGACACAGTCACTCGAGGAGTTGGACGATTTCTC +
Preference number: 5 (lower is better)
Translates to: GTGDLVWYTMMGPKL*LSFDTVTRGVGRFL
Trigger: GAGAAATCGTCCAACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTTTTGGACCCATCATGGTGTACCAGACCAAGTCTCCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 90 bp CCCTGTGGATGGCCTCCCACCCTGTATTGCAATTGCATCATTAGATaGAAGCAGTCTGATGCAGTGGGAGCACAATTAAGCTCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: PCGWPPTLYCNCIIR*KQSDAVGAQLSSLS
Trigger: GGAAAGGGAGCTTAATTGTGCTCCCACTGCATCAGACTGCTTCCATCTAATGATGCAATTGCAATACAGGGTGGGAGGCCATCCACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCAATGATGACAGGGGAATaGGCATGTTCTGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: FKHKPLATSKLVAQAALAMMTGE*ACSVQS
Trigger: AGACTGGACAGAACATGCCAATTCCCCTGTCATCAT...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS TCA 90 bp CTTGGTCTGGTACACCATGATGGGTCCAAAACTTTGCCTGTCCTTTaGCACAGTCACTCGAGGAGTTGGACGATTTCTCATTTTGGGCGG +
Preference number: 5 (lower is better)
Translates to: LGLVHHDGSKTLPVL*HSHSRSWTISHFGR
Trigger: CCGCCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTTTTGGACCCATCATGGTGTACCAGACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 90 bp AAGCGACACTCGGACCCTAAGGAGGTCTTCGTTCCTGCCTGTCCTTaGGAGTCCACAGCTGCTTTCCAAAACGTAGTTACTAGGAACAAA +
Preference number: 5 (lower is better)
Translates to: KRHSDPKEVFVPACP*ESTAAFQNVVTRNK
Trigger: TTTGTTCCTAGTAACTACGTTTTGGAAAGCAGCTGTGGACTCTCAAGGACAGGCAGGAACGAAGACCTCCTTAGGGTCCGAGTGTCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp AGAGTCTTCCATTGTGGAATCAATTCGCAAGGGGTAAATAATGTCTaGTGTTGCCTGGAAAGGCCTTGGTTGCCTCTGGTAGGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: RVFHCGINSQGVNNV*CCLERPWLPLVGRG
Trigger: CCCCCTTCCTACCAGAGGCAACCAAGGCCTTTCCAGGCAACAGCAGACATTATTTACCCCTTGCGAATTGATTCCACAATGGAAGACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGGCAGCTCGCCCGTCTaGAGCTCCCAGCAGAAATCG +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNGSSPV*SSQQKS
Trigger: CGATTTCTGCTGGGAGCTCAAGACGGGCGAGCTGCC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCATCTTGCAAATGTCTTaGGCAGTTTTGCGACTCTCT +
Preference number: 5 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIAILQMS*AVLRLS
Trigger: AGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGAT...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTCTGGGACAGAGGTCTaGCCTGGTCAGCTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTSGTEV*PGQLGH
Trigger: GTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp GGGTGTTGTGAGGAGGGTAGAGACCCTGTCCACTGTATGTCTCAGGACATAGCCAGTGAACTTCCTTTCTaGGCAGTTTACATTCAGACC +
Preference number: 5 (lower is better)
Translates to: GCCEEGRDPVHCMSQDIASELPF*AVYIQT
Trigger: GGTCTGAATGTAAACTGCCAAGAAAGGAAGTTCACT...GGCTATGTCCTGAGACATACAGTGGACAGGGTCTCTACCCTCCTCACAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCAGTAGCACAAGCAGCCTaGGCAAAACACAGTTACTAT +
Preference number: 5 (lower is better)
Translates to: FKHKPLATSKLVAQAALAVAQAA*AKHSYY
Trigger: ATAGTAACTGTGTTTTGCCAAGGCTGCTTGTGCTAC...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCCAAAGGAAGGGTGGTaGAGCCCTCCAGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYPKEGW*SPPGCR
Trigger: CCTGCAGCCTGGAGGGCTCAACCACCCTTCCTTTGG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTGGCCTGGCACCTCCTaGGGCCCCTCTGTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNWPGTS*GPSVCS
Trigger: AGAACACACAGAGGGGCCCAAGGAGGTGCCAGGCCA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 90 bp ATTAGTGAACTTCCTTTCTTGGCAGTTTACATTCAGACCATTGTCTaGGCTCTGAGAGGTGCAGACACAGCTGCTGGGACAGGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: ISELPFLAVYIQTIV*ALRGADTAAGTGER
Trigger: CCTCTCACCTGTCCCAGCAGCTGTGTCTGCACCTCTCAGAGCTCAGACAATGGTCTGAATGTAAACTGCCAAGAAAGGAAGTTCACTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 90 bp GTTGTCATTCAGGATGAGCACTTTGAGCTTGTTAAGTTTGCTGAATaGCCCAGCCTCGATGGCACTGATGTAATTGTAGTCGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: VVIQDEHFELVKFAE*PSLDGTDVIVVGLE
Trigger: CTCCAGGCCGACTACAATTACATCAGTGCCATCGAGGCTGGGGCATTCAGCAAACTTAACAAGCTCAAAGTGCTCATCCTGAATGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 90 bp CAGGTTGCTATAGCTGAACTCTTGCAGGTTTCGGTAATAGGCTACTaGGTCTCCTTCCTTCTGCATGTAGATGGGGTTTTGGCACATCTG +
Preference number: 5 (lower is better)
Translates to: QVAIAELLQVSVIGY*VSFLLHVDGVLAHL
Trigger: CAGATGTGCCAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTAGCCTATTACCGAAACCTGCAAGAGTTCAGCTATAGCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTCTGGGACAGAGGTCTaGCCTGGTCAGCTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYSGTEV*PGQLGH
Trigger: GTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGGACGATTTCTCATTTaGGGCGGCCGGCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTGRFLI*GGRLAF
Trigger: GAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTCC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGATGCAGTAAAGGGTGGTaGGGTTTTGACTGCCCCACA +
Preference number: 5 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRCSKGW*GFDCPT
Trigger: TGTGGGGCAGTCAAAACCCAACCACCCTTTACTGCA...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACTGGAAAGGCCTTGGTaGCCTCTGGTAGGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLLERPW*PLVGRG
Trigger: CCCCCTTCCTACCAGAGGCAACCAAGGCCTTTCCAG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 90 bp AGGTACAAAAGTTATAGTGGACTAGGCCTGCGCTGGGAAGTTCCTTaGCTCGCTCAGCAATATTTTGATACAGCAGCTCAGGCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RYKSYSGLGLRWEVP*LAQQYFDTAAQALL
Trigger: CAAGAGAGCCTGAGCTGCTGTATCAAAATATTGCTGAGCGAGTCAAGGAACTTCCCAGCGCAGGCCTAGTCCACTATAACTTTTGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGGCAGCTCGCCCGTCTaGAGCTCCCAGCAGAAATCG +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLGSSPV*SSQQKS
Trigger: CGATTTCTGCTGGGAGCTCAAGACGGGCGAGCTGCC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TGGGTTGGCTGCTCAGACTGTTCAGGACTGCTACTGTGCTATGATAGCATTGCTGATTCTGTCTTGGTTTaGGCGTCGAGATTCATAGGA +
Preference number: 5 (lower is better)
Translates to: WVGCSDCSGLLLCYDSIADSVLV*ASRFIG
Trigger: TCCTATGAATCTCGACGCCAAAACCAAGACAGAATC...AGCAATGCTATCATAGCACAGTAGCAGTCCTGAACAGTCTGAGCAGCCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAATCTCCAGTGGGGATaGAGGGTAGAGGGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLNLQWG*RVEGGR
Trigger: GCGGCCGCCCTCTACCCTCAATCCCCACTGGAGATT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGAGAGGGGGCACTGCTaGCCCGCAGCCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLERGHC*PAASSS
Trigger: AGAAGAAGAGGCTGCGGGCAAGCAGTGCCCCCTCTC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCGGGAACACACATGCTaGCACCTGATTTCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHREHTC*HLISRG
Trigger: CCCCCGGGAAATCAGGTGCAAGCATGTGTGTTCCCG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 90 bp CATACTGTAATTGAAAGGAGCTTACGTCTAAGTTGTTGGTATTCCTaGGAACGCTCGGCACTCCCTTTCGGCGTTTCAAGACAAAGACGA +
Preference number: 5 (lower is better)
Translates to: HTVIERSLRLSCWYS*ERSALPFGVSRQRR
Trigger: TCGTCTTTGTCTTGAAACGCCGAAAGGGAGTGCCGAGCGTTCCCAGGAATACCAACAACTTAGACGTAAGCTCCTTTCAATTACAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 90 bp TGTAAGACCCATACTGTAATTGAAAGGAGCTTACGTCTAAGTTGTTaGTATTCCTGGGAACGCTCGGCACTCCCTTTCGGCGTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: CKTHTVIERSLRLSC*YSWERSALPFGVSR
Trigger: TCTTGAAACGCCGAAAGGGAGTGCCGAGCGTTCCCAGGAATACCAACAACTTAGACGTAAGCTCCTTTCAATTACAGTATGGGTCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTCCCGGCTGCGTCAGTaGATTCTGAACTACTCCACC +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNSRLRQ*ILNYST
Trigger: GGTGGAGTAGTTCAGAATCAACTGACGCAGCCGGGA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGAAGTGCGTCTAGCAGTTaGAATCTGAGAGGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRSASSS*NLRGFA
Trigger: TGCAAAGCCTCTCAGATTCAAACTGCTAGACGCACT...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGCGGAAGAGAAGAGTaGGAGCTGAGGGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHSGREE*ELREAE
Trigger: CTCGGCTTCCCTCAGCTCCAACTCTTCTCTTCCGCT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTAGAGGCACAGGAGACTaGGTCTGGTACACCATGATG +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTRGTGD*VWYTMM
Trigger: CATCATGGTGTACCAGACCAAGTCTCCTGTGCCTCT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGATTAGGTAGAGTTTCTTaGGACTGGTCGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRLGRVS*DWSVWA
Trigger: AGCCCAAACCGACCAGTCCAAAGAAACTCTACCTAA...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGCTCAGTGGCACTTATaGTGTAAGCAGGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTAQWHL*CKQVWL
Trigger: CAGCCACACCTGCTTACACAATAAGTGCCACTGAGC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TTCAAGCACAAGCCGTTAGCCACCAGCAAACTGGTAGCACAAGCAGCCTTGGCAGTAAAGAAGGGCTGTTaGTTTAAATCACACAATCAC +
Preference number: 5 (lower is better)
Translates to: FKHKPLATSKLVAQAALAVKKGC*FKSHNH
Trigger: GTGATTGTGTGATTTAAACAAACAGCCCTTCTTTAC...TGCCAAGGCTGCTTGTGCTACCAGTTTGCTGGTGGCTAACGGCTTGTGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCAACAAGGCACACAGGTaGACCATAGTCCAGAACCAA +
Preference number: 5 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASNKAHR*TIVQNQ
Trigger: TTGGTTCTGGACTATGGTCAACCTGTGTGCCTTGTT...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGAAAGGTGGAGGTGGTaGGGGGCTCATGAGATTCTT +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTERWRW*GAHEIL
Trigger: AAGAATCTCATGAGCCCCCAACCACCTCCACCTTTC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGTGTGGTGTGCCTCTTaGCTACAGGACTGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLVWCAS*LQDWCP
Trigger: GGGGCACCAGTCCTGTAGCAAAGAGGCACACCACAC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 90 bp ATACAGAGCCCTGATTCAGTGCTAAGAGAATTCCTTTCTGGGTGGTaGCCCACCAAACATATTTGCCTGGACTCTGAAAGTCAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: IQSPDSVLREFLSGW*PTKHICLDSESQLN
Trigger: ATTGAGCTGACTTTCAGAGTCCAGGCAAATATGTTTGGTGGGTCACCACCCAGAAAGGAATTCTCTTAGCACTGAATCAGGGCTCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 90 bp AGAGCCTTGGACCAGGCATCAGAAGCCCCCTTACCCTCTAATTCTTaGTTGGCGTTTAGCAAAATACTTTCCTTCTGGAGACTCAAATTT +
Preference number: 5 (lower is better)
Translates to: RALDQASEAPLPSNS*LAFSKILSFWRLKF
Trigger: AAATTTGAGTCTCCAGAAGGAAAGTATTTTGCTAAACGCCAAGCAAGAATTAGAGGGTAAGGGGGCTTCTGATGCCTGGTCCAAGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTCCTTGCAAGTGGCTTaGCAAAGCTCAATTCCCGGC +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYSLQVA*QSSIPG
Trigger: GCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGGA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAAGCGGAAGAGAAGAGTaGGAGCTGAGGGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQASGREE*ELREAE
Trigger: CTCGGCTTCCCTCAGCTCCAACTCTTCTCTTCCGCT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGGAGCCCTGGTTGGGTaGAGAGCAGGATTCATTGTA +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYGALVG*RAGFIV
Trigger: TACAATGAATCCTGCTCTCAACCCAACCAGGGCTCC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGGACGATTTCTCATTTaGGGCGGCCGGCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLGRFLI*GGRLAF
Trigger: GAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTCC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTAACTTTGCCTGTCCTTaGACACAGTCACTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTNFACP*TQSLEE
Trigger: CTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTTTGGACTGGTCGGTTaGGGCTGCAGGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYFGLVG*GCRSEI
Trigger: TATCTCTGACCTGCAGCCCAAACCGACCAGTCCAAA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGCTCAGTGGCACTTATaGTGTAAGCAGGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNAQWHL*CKQVWL
Trigger: CAGCCACACCTGCTTACACAATAAGTGCCACTGAGC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGCGCTGGGAAGTTCCTaGACTCGCTCAGCAATATTT +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTALGSS*TRSAIF
Trigger: AAATATTGCTGAGCGAGTCAAGGAACTTCCCAGCGC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATGCAGTAAAGGGTGGTaGGGTTTTGACTGCCCCACA +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLCSKGW*GFDCPT
Trigger: TGTGGGGCAGTCAAAACCCAACCACCCTTTACTGCA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCGAAGGGAATTACCATTaGTCATTTGTAGGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASEGNYH*SFVGPD
Trigger: GTCTGGCCCTACAAATGACAAATGGTAATTCCCTTC...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACTTCTTCTAAGAGCCTaGGACCAGGCATCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLLLLRA*DQASEA
Trigger: GGCTTCTGATGCCTGGTCCAAGGCTCTTAGAAGAAG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAAGCCTTTCCAGAGCATaGCTAATGGCCAGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLSLSRA*LMARCW
Trigger: CCAACACCTGGCCATTAGCAATGCTCTGGAAAGGCT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 90 bp AGACAATCTCTCCCACAAAAACAGTTATGGTGTCTAGCCAGGCCTTaGGAGGAAGTAAGTCACAAGTGCAATTCCATGGATTTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: RQSLPQKQLWCLARP*EEVSHKCNSMDFPP
Trigger: TGGAGGAAAATCCATGGAATTGCACTTGTGACTTACTTCCTCTCAAGGCCTGGCTAGACACCATAACTGTTTTTGTGGGAGAGATTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 90 bp CAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCTCTaGTGCCTTAGGGTTGTAAATGATTTCCCTTCACAGCTGACTGAT +
Preference number: 5 (lower is better)
Translates to: QKLMSLFPTVRSSIL*CLRVVNDFPSQLTD
Trigger: ATCAGTCAGCTGTGAAGGGAAATCATTTACAACCCTAAGGCATCAGAGGATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 90 bp TTTATACTTAGCCAGATAATGAGGTTTAAACGTGCACTTCTTGCCTaGAGGAAGGAGAAAAGAAGTGGGTGTCAGAAAAGCACTGCCAGG +
Preference number: 5 (lower is better)
Translates to: FILSQIMRFKRALLA*RKEKRSGCQKSTAR
Trigger: CCTGGCAGTGCTTTTCTGACACCCACTTCTTTTCTCCTTCCTCCAGGCAAGAAGTGCACGTTTAAACCTCATTATCTGGCTAAGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTTGAGCTTGTTAAGTTaGCTGAATGCCCCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNLSLLS*LNAPAS
Trigger: CGAGGCTGGGGCATTCAGCAAACTTAACAAGCTCAA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATTGAGCTTGTTAAGTTaGCTGAATGCCCCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLLSLLS*LNAPAS
Trigger: CGAGGCTGGGGCATTCAGCAAACTTAACAAGCTCAA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TACCATTTGTCATTTGTAGGGCCAGACATACAGATATGTTCTTGGCAGGGCCCTATGAGCACTTTGAGCTaGTTAAGTTTGCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: YHLSFVGPDIQICSWQGPMSTLS*LSLLNA
Trigger: GGCATTCAGCAAACTTAACAAGCTCAAAGTGCTCAT...AGGGCCCTGCCAAGAACATATCTGTATGTCTGGCCCTACAAATGACAAATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGTGTCTAGCCAGGCCTaGAGAGGAAGTAAGTCACAA +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNVSSQA*RGSKSQ
Trigger: TTGTGACTTACTTCCTCTCAAGGCCTGGCTAGACAC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGAGGCACAGGAGACTaGGTCTGGTACACCATGATG +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHRGTGD*VWYTMM
Trigger: CATCATGGTGTACCAGACCAAGTCTCCTGTGCCTCT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGCTATAGCTGAACTCTaGCAGGTTTCGGTAATAGGC +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTAIAEL*QVSVIG
Trigger: GCCTATTACCGAAACCTGCAAGAGTTCAGCTATAGC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGCGCTGGGAAGTTCCTaGACTCGCTCAGCAATATTT +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYALGSS*TRSAIF
Trigger: AAATATTGCTGAGCGAGTCAAGGAACTTCCCAGCGC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTCCCCTTCTCCTTCCTaGTTAAGCCTAGGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNSPSPS*LSLGSR
Trigger: CCTAGAACCTAGGCTTAACAAGGAAGGAGAAGGGGA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATACAAAACACTTCAGCTaGCTTTCCCGGAGTCCCACT +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYTKHFS*LSRSPT
Trigger: AGTGGGACTCCGGGAAAGCAAGCTGAAGTGTTTTGT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATTGCCTGGAAAGGCCTaGGTTGCCTCTGGTAGGAAG +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQALPGKA*VASGRK
Trigger: CTTCCTACCAGAGGCAACCAAGGCCTTTCCAGGCAA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 90 bp TCCACAGCTGCTTTCCAAAACGTAGTTACTAGGAACAAATCAGCCTaGAACGCGATAACCACTTTAAGTAAGTTTCATTTGGCCCCGTGT +
Preference number: 5 (lower is better)
Translates to: STAAFQNVVTRNKSA*NAITTLSKFHLAPC
Trigger: ACACGGGGCCAAATGAAACTTACTTAAAGTGGTTATCGCGTTTCAGGCTGATTTGTTCCTAGTAACTACGTTTTGGAAAGCAGCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp AGAAATGAATGGACTGGGAGAATTGTCTGGACGGCTTTCTTCACTCTAGCATCCCCTTTGTTCTCACAGTaGATATTCAGTACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RNEWTGRIVWTAFFTLASPLFSQ*IFSTFS
Trigger: GGAAAACGTACTGAATATCAACTGTGAGAACAAAGG...GGATGCTAGAGTGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp ACCTCTAATCAAAGAATGAGCATGTTAGCTTGCCACTGTAGATATTCAGAGATTGGAGCCCTGGTTGGGTaGAGAGCAGGATTCATTGTA +
Preference number: 5 (lower is better)
Translates to: TSNQRMSMLACHCRYSEIGALVG*RAGFIV
Trigger: TACAATGAATCCTGCTCTCAACCCAACCAGGGCTCC...AATCTCTGAATATCTACAGTGGCAAGCTAACATGCTCATTCTTTGATTAGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACAGTCACTCGAGGAGTaGGACGATTTCTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLQSLEE*DDFSFW
Trigger: CCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATTTGGACTGGTCGGTTaGGGCTGCAGGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLFGLVG*GCRSEI
Trigger: TATCTCTGACCTGCAGCCCAAACCGACCAGTCCAAA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTGACCGAAGAAGGTTGTaGTTCAGAAACAGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTDRRRL*FRNSSC
Trigger: ACAGCTACTGTTTCTGAACAACAACCTTCTTCGGTC...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAATGATGACAGGGGAATaGGCATGTTCTGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLMMTGE*ACSVQS
Trigger: AGACTGGACAGAACATGCCAATTCCCCTGTCATCAT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATGAGCTTACGTCTAAGTaGTTGGTATTCCTGGGAACG +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNELTSK*LVFLGT
Trigger: CGTTCCCAGGAATACCAACAACTTAGACGTAAGCTC...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAGAGCTTACGTCTAAGTaGTTGGTATTCCTGGGAACG +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLELTSK*LVFLGT
Trigger: CGTTCCCAGGAATACCAACAACTTAGACGTAAGCTC...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATTCGCTCAGCAATATTTaGATACAGCAGCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYSLSNI*IQQLRL
Trigger: GAGCCTGAGCTGCTGTATCAAAATATTGCTGAGCGA...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp GCTGAGCAGAAGAGTCCTGTGTTCAATTTTGTTGAAATGGGTTGGCTGCTCAGAACCAAAATGAAAGTCTaGCTCAAGCTGACAAGGAAA +
Preference number: 5 (lower is better)
Translates to: AEQKSPVFNFVEMGWLLRTKMKV*LKLTRK
Trigger: TTTCCTTGTCAGCTTGAGCAAGACTTTCATTTTGGT...TCTGAGCAGCCAACCCATTTCAACAAAATTGAACACAGGACTCTTCTGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACATACAGATATGTTCTaGGCAGGGCCCTGGGAGACT +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQAHTDMF*AGPWET
Trigger: AGTCTCCCAGGGCCCTGCCAAGAACATATCTGTATG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATCCCAAGAGTCTTCCATaGTGGAATCAATTCGCAAGG +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNPKSLP*WNQFAR
Trigger: CCTTGCGAATTGATTCCACAATGGAAGACTCTTGGG...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATAGTGCGTCTAGCAGTTaGAATCTGAGAGGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHSASSS*NLRGFA
Trigger: TGCAAAGCCTCTCAGATTCAAACTGCTAGACGCACT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTATCTTGCAAATGTCTTaGGCAGTTTTGCGACTCTCT +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTILQMS*AVLRLS
Trigger: AGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGAT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGTGTCTAGCCAGGCCTaGAGAGGAAGTAAGTCACAA +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQAVSSQA*RGSKSQ
Trigger: TTGTGACTTACTTCCTCTCAAGGCCTGGCTAGACAC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGACCGAAGAAGGTTGTaGTTCAGAAACAGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYDRRRL*FRNSSC
Trigger: ACAGCTACTGTTTCTGAACAACAACCTTCTTCGGTC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAAAGGACCGAAGAAGGTaGTTGTTCAGAAACAGTAGC +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLKDRRR*LFRNSS
Trigger: GCTACTGTTTCTGAACAACAACCTTCTTCGGTCCTT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATAAGGACCGAAGAAGGTaGTTGTTCAGAAACAGTAGC +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYKDRRR*LFRNSS
Trigger: GCTACTGTTTCTGAACAACAACCTTCTTCGGTCCTT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTCTGTATTGTGATTCATaGACAAGACGGTTCCATCTG +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTLYCDS*TRRFHL
Trigger: CAGATGGAACCGTCTTGTCAATGAATCACAATACAG...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCTTACGTCTAAGTTGTaGGTATTCCTGGGAACGCTC +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHLTSKL*VFLGTL
Trigger: GAGCGTTCCCAGGAATACCAACAACTTAGACGTAAG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTCGCTCAGCAATATTTaGATACAGCAGCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHSLSNI*IQQLRL
Trigger: GAGCCTGAGCTGCTGTATCAAAATATTGCTGAGCGA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGATTCTGTCTTGGTTTaGGCGTCGAGATTCATAGGA +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYDSVLV*ASRFIG
Trigger: TCCTATGAATCTCGACGCCAAAACCAAGACAGAATC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAAGGGTGGTTGGGTTTaGACTGCCCCACAAAGCATT +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLKGGWV*TAPQSI
Trigger: AATGCTTTGTGGGGCAGTCAAAACCCAACCACCCTT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTACAAAAGCTAATGTCCTaGTTTCCAACAGTTCGGAGC +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLQKLMS*FPTVRS
Trigger: GCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTG...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATATGTCTTTGGCAGTTTaGCGACTCTCTGTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHMSLAV*RLSVCK
Trigger: CTTACAGACAGAGAGTCGCAAAACTGCCAAAGACAT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACAGTCACTCGAGGAGTaGGACGATTTCTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQAQSLEE*DDFSFW
Trigger: CCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATAGTGAACTTCCTTTCTaGGCAGTTTACATTCAGACC +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNSELPF*AVYIQT
Trigger: GGTCTGAATGTAAACTGCCAAGAAAGGAAGTTCACT...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTATTAGGTAGAGTTTCTTaGGACTGGTCGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLLGRVS*DWSVWA
Trigger: AGCCCAAACCGACCAGTCCAAAGAAACTCTACCTAA...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATATGACTGCAATCCTGTaGTTTCCTAAGTGCAGTAAG +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYMTAIL*FPKCSK
Trigger: CTTACTGCACTTAGGAAACAACAGGATTGCAGTCAT...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACTTACGTCTAAGTTGTaGGTATTCCTGGGAACGCTC +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQALTSKL*VFLGTL
Trigger: GAGCGTTCCCAGGAATACCAACAACTTAGACGTAAG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGCTATAGCTGAACTCTaGCAGGTTTCGGTAATAGGC +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQAAIAEL*QVSVIG
Trigger: GCCTATTACCGAAACCTGCAAGAGTTCAGCTATAGC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAAATGGACTGGGAGAATaGTCTGGACGGCTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQANGLGE*SGRLSS
Trigger: TGAAGAAAGCCGTCCAGACAATTCTCCCAGTCCATT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTATTAAGTAAGTTTCATTaGGCCCCGTGTCTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLLSKFH*APCLLK
Trigger: CTTCAGAAGACACGGGGCCAAATGAAACTTACTTAA...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGGGCTCATGAGATTCTaGAGACCTACAGAATCAAGG +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLGLMRF*RPTESR
Trigger: CCTTGATTCTGTAGGTCTCAAGAATCTCATGAGCCC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAATGTCTTTGGCAGTTTaGCGACTCTCTGTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLMSLAV*RLSVCK
Trigger: CTTACAGACAGAGAGTCGCAAAACTGCCAAAGACAT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ATGTACTTAAAGTGCGAAGGCACTTTAACACAAAGTAGTGATACCCAGTGGCTAATCTCAAGCTTGTTGTaGTTGAGATGCAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: MYLKCEGTLTQSSDTQWLISSLL*LRCSLL
Trigger: CAAAAGACTGCATCTCAACAACAACAAGCTTGAGAT...TAGCCACTGGGTATCACTACTTTGTGTTAAAGTGCCTTCGCACTTTAAGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTAATATCTCAAGCTTGTaGTTGTTGAGATGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTNISSL*LLRCSL
Trigger: AAGACTGCATCTCAACAACAACAAGCTTGAGATATT...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCTCAATATCTCAAGCTaGTTGTTGTTGAGATGCAGT +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYLNISS*LLLRCS
Trigger: ACTGCATCTCAACAACAACAAGCTTGAGATATTGAG...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATATGAGCACTTTGAGCTaGTTAAGTTTGCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHMSTLS*LSLLNA
Trigger: GGCATTCAGCAAACTTAACAAGCTCAAAGTGCTCAT...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAAGTGAAAGCAGAAGGTaGTCATTCAGGATGAGCACT +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQASESRR*SFRMST
Trigger: AGTGCTCATCCTGAATGACAACCTTCTGCTTTCACT...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAGTGAAAGCAGAAGGTaGTCATTCAGGATGAGCACT +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLSESRR*SFRMST
Trigger: AGTGCTCATCCTGAATGACAACCTTCTGCTTTCACT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACAAAAGCTAATGTCCTaGTTTCCAACAGTTCGGAGC +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLQKLMS*FPTVRS
Trigger: GCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTTTGCCTATTCTTTCTTCAGTCACTATAATCTCCTCTTCCCACTCCCACACTTGTACATTAACTTTCTaGAAGATCATTTCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: SLPILSSVTIISSSHSHTCTLTF*KIISAH
Trigger: GTGGGCTGAAATGATCTTCAAGAAAGTTAATGTACA...AGTGTGGGAGTGGGAAGAGGAGATTATAGTGACTGAAGAAAGAATAGGCAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp TTAACACAAAGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATTGTGCTATGATAGCATaGCTTGATAGCTCAATTCAC +
Preference number: 5 (lower is better)
Translates to: LTQSSDTQWLYSVTDDGNCAMIA*LDSSIH
Trigger: GTGAATTGAGCTATCAAGCAATGCTATCATAGCACA...ATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACTTTGTGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGTCCTGTGTTCAATTTaGTTGAAATGGGTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQAVLCSI*LKWVGC
Trigger: GCAGCCAACCCATTTCAACAAAATTGAACACAGGAC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATTAAACGTGCACTTCTaGCCTGGAGGAAGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQALNVHF*PGGRRK
Trigger: TTTTCTCCTTCCTCCAGGCAAGAAGTGCACGTTTAA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp AGTAGTGATACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATGGCAGAATGAAATCATaGCATTTTCCAAAGCGGTTT +
Preference number: 5 (lower is better)
Translates to: SSDTQWLYSVTDDGNTIYGRMKS*HFPKRF
Trigger: AAACCGCTTTGGAAAATGCAATGATTTCATTCTGCC...ATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGTATCACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 90 bp TCAAGACAAAGACGAATAAACCAGCCCCAAAACAGACAGATAAGATaGAAACAACAAGCAATCCCAGAATTAAGACAGACAGTGGAACTT +
Preference number: 5 (lower is better)
Translates to: SRQRRINQPQNRQIR*KQQAIPELRQTVEL
Trigger: AAGTTCCACTGTCTGTCTTAATTCTGGGATTGCTTGTTGTTTTCATCTTATCTGTCTGTTTTGGGGCTGGTTTATTCGTCTTTGTCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATTCAAGCTTGTTGTTGTaGAGATGCAGTCTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHSSLLL*RCSLLR
Trigger: TCTCAAAAGACTGCATCTCAACAACAACAAGCTTGA...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAATGACTGCAATCCTGTaGTTTCCTAAGTGCAGTAAG +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLMTAIL*FPKCSK
Trigger: CTTACTGCACTTAGGAAACAACAGGATTGCAGTCAT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACTGTATTGTGATTCATaGACAAGACGGTTCCATCTG +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQALYCDS*TRRFHL
Trigger: CAGATGGAACCGTCTTGTCAATGAATCACAATACAG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACAAAAACAAACACAAAAGCTAATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCAGGTGTTGGATTTTaGCCTTCATTATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: TKTNTKANVLVSNSSEQHPGVGF*PSLSVF
Trigger: GAAAACAGATAATGAAGGCAAAAATCCAACACCTGG...ATGCTGCTCCGAACTGTTGGAAACAAGGACATTAGCTTTTGTGTTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCAGCTAATGGCCAGGTGTaGGATTTTTGCCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQAANGQV*DFCLHY
Trigger: ATAATGAAGGCAAAAATCCAACACCTGGCCATTAGC...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTACCTTTGTTCTCACAGTaGATATTCAGTACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLPLFSQ*IFSTFS
Trigger: GGAAAACGTACTGAATATCAACTGTGAGAACAAAGG...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCATCAAGCTTGTTGTTGTaGAGATGCAGTCTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQASSLLL*RCSLLR
Trigger: TCTCAAAAGACTGCATCTCAACAACAACAAGCTTGA...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp AAAGTCCTAGAACTAGAATCATTTGATGACAGGCTGGTTTCTATAACTCAAGCACTCAATATCTCAAGCTaGTTGTTGTTGAGATGCAGT +
Preference number: 5 (lower is better)
Translates to: KVLELESFDDRLVSITQALNISS*LLLRCS
Trigger: ACTGCATCTCAACAACAACAAGCTTGAGATATTGAG...TGCTTGAGTTATAGAAACCAGCCTGTCATCAAATGATTCTAGTTCTAGGACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAAATATCTCAAGCTTGTaGTTGTTGAGATGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLNISSL*LLRCSL
Trigger: AAGACTGCATCTCAACAACAACAAGCTTGAGATATT...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS-3UTR CAA 90 bp ACCCAGTGGCTATACTCGGTAACTGACGATGGAAATACCATATATCATTATTTAGAGGACAGATTATTTTaGCGAAGAATTTCAGAGACA +
Preference number: 5 (lower is better)
Translates to: TQWLYSVTDDGNTIYHYLEDRLF*RRISET
Trigger: TGTCTCTGAAATTCTTCGCAAAAATAATCTGTCCTC...TAAATAATGATATATGGTATTTCCATCGTCAGTTACCGAGTATAGCCACTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp CCCCTACCTGCTAGACGCCTGGTGCGGTGCCCGGCATaGGGACCTACAGCCGCGACGGCCACTCGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: PLPARRLVRCPA*GPTAATATRAA
Trigger: GGCAGCCCGAGTGGCCGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp ACTGGGCACCGGCCGCCAGCGCAGCCCTACCTTCCCTaGCCCTACCTGCTAGACGCCTGGTGCGGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: TGHRPPAQPYLP*PYLLDAWCGAR
Trigger: CCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGGCAGGGAAGGTAGGGCTGCGCTGGCGGCCGGTGCCCAGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp CTGGCCCGGTCGGCGGGCGAAGGCGACGACGGAGCCTaGGCGCGCGTTTCCAATTCGGTGGCGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: LARSAGEGDDGA*ARVSNSVAVAA
Trigger: TGCTGCCACCGCCACCGAATTGGAAACGCGCGCCCAGGCTCCGTCGTCGCCTTCGCCCGCCGACCGGGCCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp GACCTACAGCCGCGACGGCCACTCGGGCTGCCCTCGCCATGGGACTaGGGCACTGCAGGCCGACCGGAGGCTTCTAGCTCGCGCCGGGTG +
Preference number: 6 (lower is better)
Translates to: DLQPRRPLGLPSPWD*GTAGRPEASSSRRV
Trigger: CACCCGGCGCGAGCTAGAAGCCTCCGGTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGGGCAGCCCGAGTGGCCGTCGCGGCTGTAGGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp GGCATGCGGACCTACAGCCGCGACGGCCACTCGGGCTaGCCTCGCCATGGGACTTGGGCACTGCAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: GMRTYSRDGHSG*PRHGTWALQAD
Trigger: GTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGGGCAGCCCGAGTGGCCGTCGCGGCTGTAGGTCCGCATGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp CGCGACGGCCACTCGGGCTGCCCTCGCCATGGGACTTaGGCACTGCAGGCCGACCGGAGGCTTCTAGCTCGC +
Preference number: 6 (lower is better)
Translates to: RDGHSGCPRHGT*ALQADRRLLAR
Trigger: GCGAGCTAGAAGCCTCCGGTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGGGCAGCCCGAGTGGCCGTCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp CCGCGACGGCCACTCGGGCTGCCCTCGCCATGGGACTaGGGCACTGCAGGCCGACCGGAGGCTTCTAGCTCG +
Preference number: 6 (lower is better)
Translates to: PRRPLGLPSPWD*GTAGRPEASSS
Trigger: CGAGCTAGAAGCCTCCGGTCGGCCTGCAGTGCCCAAGTCCCATGGCGAGGGCAGCCCGAGTGGCCGTCGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp CCGCCCAGATCTTTTCCCGGAGGCGCCCGCAGCATCTaGGACTCGGGGAGGCAAAGGAGCCGGCACCGCCTC +
Preference number: 6 (lower is better)
Translates to: PPRSFPGGARSI*DSGRQRSRHRL
Trigger: GAGGCGGTGCCGGCTCCTTTGCCTCCCCGAGTCGCAGATGCTGCGGGCGCCTCCGGGAAAAGATCTGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS GCA 72 bp CCTTCCCTGCCCCTACCTGCTAGACGCCTGGTGCGGTaGCCGGCATGCGGACCTACAGCCGCGACGGCCACT +
Preference number: 6 (lower is better)
Translates to: PSLPLPARRLVR*PACGPTAATAT
Trigger: AGTGGCCGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGGCAGGGAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp CCCTACCTTCCCTGCCCCTACCTGCTAGACGCCTGGTaGGGTGCCCGGCATGCGGACCTACAGCCGCGACGG +
Preference number: 6 (lower is better)
Translates to: PYLPCPYLLDAW*GARHADLQPRR
Trigger: CCGTCGCGGCTGTAGGTCCGCATGCCGGGCACCGCACCAGGCGTCTAGCAGGTAGGGGCAGGGAAGGTAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp GCTCAGGTCTCCAAGCCTTCCACAGGACACGGTGGGTaGCGGCGGGCTTACAGCCCACCTCCGTCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: AQVSKPSTGHGG*RRAYSPPPSRP
Trigger: CGGCCGGGACGGAGGTGGGCTGTAAGCCCGCCGGCACCCACCGTGTCCTGTGGAAGGCTTGGAGACCTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp ACCAGGTGTCTCCGAGCGTCCCCGATCGCCGGTAACTaGGCACCGGCCGCCAGCGCAGCCCTACCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: TRCLRASPIAGN*APAASAALPSL
Trigger: CAGGGAAGGTAGGGCTGCGCTGGCGGCCGGTGCCCAGTTACCGGCGATCGGGGACGCTCGGAGACACCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp GCTGAGGGAAGCCGAGCTGCCAGGGAGGGACTGGGGTaGGATTCTGTAGGGAGGTCGGAGAGCCGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: AEGSRAAREGLG*DSVGRSESRLA
Trigger: GGCCAGCCGGCTCTCCGACCTCCCTACAGAATCGCACCCCAGTCCCTCCCTGGCAGCTCGGCTTCCCTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp CCTGGCTCAGGTCTCCAAGCCTTCCACAGGACACGGTaGGTGCCGGCGGGCTTACAGCCCACCTCCGTCCCG +
Preference number: 6 (lower is better)
Translates to: PGSGLQAFHRTR*VPAGLQPTSVP
Trigger: CGGGACGGAGGTGGGCTGTAAGCCCGCCGGCACCCACCGTGTCCTGTGGAAGGCTTGGAGACCTGAGCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 72 bp CGACAGGAGGCAGGAGCGGAAGAGAAGAGTTGGAGCTaGGGGAAGCCGAGCTGCCAGGGAGGGACTGGGGTG +
Preference number: 6 (lower is better)
Translates to: RQEAGAEEKSWS*GKPSCQGGTGV
Trigger: CACCCCAGTCCCTCCCTGGCAGCTCGGCTTCCCTCAGCTCCAACTCTTCTCTTCCGCTCCTGCCTCCTGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 72 bp AAGAGGAGTCCGGGGAACCAGAGAGGGGGCACTGCTTaGCCGCAGCCTCTTCTTCTAAACACCCGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: KRSPGNQRGGTA*PQPLLLNTRRP
Trigger: CGGGCGGCGGGTGTTTAGAAGAAGAGGCTGCGGGCAAGCAGTGCCCCCTCTCTGGTTCCCCGGACTCCTCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp CAGGCAGAGGATCCAGGGCGCGCGGTGGGGGAGGGTTaGGCAGATGCTTCCCTTCCTTGCAAGTGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: QAEDPGRAVGEG*ADASLPCKWLC
Trigger: GCAAAGCCACTTGCAAGGAAGGGAAGCATCTGCCCAACCCTCCCCCACCGCGCGCCCTGGATCCTCTGCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp CAGAAAAGCACTGCCAGGCTGAGCCTCAGCTGGGAGTaGGAGCCAAAGGAAGGGTGGTTGAGCCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: QKSTARLSLSWE*EPKEGWLSPPG
Trigger: GCCTGGAGGGCTCAACCACCCTTCCTTTGGCTCCCACTCCCAGCTGAGGCTCAGCCTGGCAGTGCTTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp CAATTCGGTGGCGGTGGCAGCAGTGCGTCTAGCAGTTaGAATCTGAGAGGCTTTGCAGGCTCCCCGGGACAG +
Preference number: 6 (lower is better)
Translates to: QFGGGGSSASSS*NLRGFAGSPGQ
Trigger: CTGTCCCGGGGAGCCTGCAAAGCCTCTCAGATTCAAACTGCTAGACGCACTGCTGCCACCGCCACCGAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp GACACAGTCACTCGAGGAGTTGGACGATTTCTCATTTaGGGCGGCCGGCTGGCTTTCGGAGCCCTGGTTGGG +
Preference number: 6 (lower is better)
Translates to: DTVTRGVGRFLI*GGRLAFGALVG
Trigger: CCCAACCAGGGCTCCGAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp TGTGTGTGTGTGGTGTGCCTCTTTGCTACAGGACTGGTGCCCCACTaGCCAGCTCCTAGCTCAGATGCTCTCTGTGCAGAGAGTGGGGTG +
Preference number: 6 (lower is better)
Translates to: CVCVVCLFATGLVPH*PAPSSDALCAESGV
Trigger: CACCCCACTCTCTGCACAGAGAGCATCTGAGCTAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp ACACAGTCACTCGAGGAGTTGGACGATTTCTCATTTTaGGCGGCCGGCTGGCTTTCGGAGCCCTGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: TQSLEELDDFSF*AAGWLSEPWLG
Trigger: ACCCAACCAGGGCTCCGAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp TTTCTCATTTTGGGCGGCCGGCTGGCTTTCGGAGCCCTGGTTGGGTaGAGAGCAGGATTCATTGTAGGTGACAGCCTTTGGACGTGGGTG +
Preference number: 6 (lower is better)
Translates to: FLILGGRLAFGALVG*RAGFIVGDSLWTWV
Trigger: CACCCACGTCCAAAGGCTGTCACCTACAATGAATCCTGCTCTCAACCCAACCAGGGCTCCGAAAGCCAGCCGGCCGCCCAAAATGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp CTGTCCTTTGACACAGTCACTCGAGGAGTTGGACGATTTCTCATTTaGGGCGGCCGGCTGGCTTTCGGAGCCCTGGTTGGGTTGAGAGCA +
Preference number: 6 (lower is better)
Translates to: LSFDTVTRGVGRFLI*GGRLAFGALVGLRA
Trigger: TGCTCTCAACCCAACCAGGGCTCCGAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTGTGTCAAAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp GGTATCTCGAAGAGATCTCGGGCAGCTCGCCCGTCTTaGGCTCCCAGCAGAAATCGCAATCGACATCAGGAG +
Preference number: 6 (lower is better)
Translates to: GISKRSRAARPS*APSRNRNRHQE
Trigger: CTCCTGATGTCGATTGCGATTTCTGCTGGGAGCTCAAGACGGGCGAGCTGCCCGAGATCTCTTCGAGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS TCA 72 bp AGCCTTTGGACGTGGGTGTCAGCATGGCTGCCCCTCTaGCTGGAATCACTGGCACTTTTTCTGGGACAGAGG +
Preference number: 6 (lower is better)
Translates to: SLWTWVSAWLPL*LESLALFLGQR
Trigger: CCTCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGAGGGGCAGCCATGCTGACACCCACGTCCAAAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp AGCCCTGGTTGGGTTGAGAGCAGGATTCATTGTAGGTaGCAGCCTTTGGACGTGGGTGTCAGCATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SPGWVESRIHCR*QPLDVGVSMAA
Trigger: GGCAGCCATGCTGACACCCACGTCCAAAGGCTGTCACCTACAATGAATCCTGCTCTCAACCCAACCAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 72 bp TGGTGTGCCTCTTTGCTACAGGACTGGTGCCCCACTTaGCAGCTCCTAGCTCAGATGCTCTCTGTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: WCASLLQDWCPT*QLLAQMLSVQR
Trigger: TCTCTGCACAGAGAGCATCTGAGCTAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp GTGTGTGTGTGGTGTGCCTCTTTGCTACAGGACTGGTaGCCCACTTGCCAGCTCCTAGCTCAGATGCTCTCT +
Preference number: 6 (lower is better)
Translates to: VCVWCASLLQDW*PTCQLLAQMLS
Trigger: AGAGAGCATCTGAGCTAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp GGGGAGGGTTGGGCAGATGCTTCCCTTCCTTGCAAGTaGCTTTGCAAAGCTCAATTCCCGGCTGCGTCAGTT +
Preference number: 6 (lower is better)
Translates to: GEGWADASLPCK*LCKAQFPAASV
Trigger: AACTGACGCAGCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGGAAGGGAAGCATCTGCCCAACCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp GGGTGTCAGCATGGCTGCCCCTCTGACTGGAATCACTaGCACTTTTTCTGGGACAGAGGTCTTGCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: GCQHGCPSDWNH*HFFWDRGLAWS
Trigger: TGACCAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGAGGGGCAGCCATGCTGACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp TGTGTGTGTGTGTGGTGTGCCTCTTTGCTACAGGACTaGTGCCCCACTTGCCAGCTCCTAGCTCAGATGCTC +
Preference number: 6 (lower is better)
Translates to: CVCVWCASLLQD*CPTCQLLAQML
Trigger: GAGCATCTGAGCTAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp GGGTATCTCGAAGAGATCTCGGGCAGCTCGCCCGTCTaGAGCTCCCAGCAGAAATCGCAATCGACATCAGGA +
Preference number: 6 (lower is better)
Translates to: GYLEEISGSSPV*SSQQKSQSTSG
Trigger: TCCTGATGTCGATTGCGATTTCTGCTGGGAGCTCAAGACGGGCGAGCTGCCCGAGATCTCTTCGAGATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS CAA 90 bp GCCCCTCTGACTGGAATCACTGGCACTTTTTCTGGGACAGAGGTCTaGCCTGGTCAGCTGGGTCACGTCTTTCCCATGCAACCTAAAGGG +
Preference number: 6 (lower is better)
Translates to: APLTGITGTFSGTEV*PGQLGHVFPMQPKG
Trigger: CCCTTTAGGTTGCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp TGGGTCCAAAACTTTGCCTGTCCTTTGACACAGTCACTCGAGGAGTaGGACGATTTCTCATTTTGGGCGGCCGGCTGGCTTTCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: WVQNFACPLTQSLEE*DDFSFWAAGWLSEP
Trigger: GGGCTCCGAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTTTTGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp GAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGCCTCTTaGCTACAGGACTGGTGCCCCACTTGCCAGCTCCTAGCTCAGATG +
Preference number: 6 (lower is better)
Translates to: ESVCVCVCVCVWCAS*LQDWCPTCQLLAQM
Trigger: CATCTGAGCTAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACACACACACACACACACACACACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp GAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTaGCTCTTTGCTACAGGACTGGTGCCCCACTTGCCA +
Preference number: 6 (lower is better)
Translates to: ECVCVCVCVCVV*LFATGLVPHLP
Trigger: TGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACACACACACACACACACACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp CTGCTGGGACAGGTGAGAGGCACAGGAGACTTGGTCTaGTACACCATGATGGGTCCAAAACTTTGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: LLGQVRGTGDLV*YTMMGPKLCLS
Trigger: GGACAGGCAAAGTTTTGGACCCATCATGGTGTACCAGACCAAGTCTCCTGTGCCTCTCACCTGTCCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp GGGGTAAATAATGTCTGCTGTTGCCTGGAAAGGCCTTaGTTGCCTCTGGTAGGAAGGGGGAGATGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GVNNVCCCLERP*LPLVGRGRWVR
Trigger: CCTGACCCATCTCCCCCTTCCTACCAGAGGCAACCAAGGCCTTTCCAGGCAACAGCAGACATTATTTACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGCCTCTTaGCTACAGGACTGGTGCCCCACTTGCCAGCTCCTA +
Preference number: 6 (lower is better)
Translates to: CVCVCVCVWCAS*LQDWCPTCQLL
Trigger: TAGGAGCTGGCAAGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 90 bp TTCCTTGCAAGTGGCTTTGCAAAGCTCAATTCCCGGCTGCGTCAGTaGATTCTGAACTACTCCACCTCCAACCTGGCTGGCGGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: FLASGFAKLNSRLRQ*ILNYSTSNLAGGRR
Trigger: TCTCCTGCCGCCAGCCAGGTTGGAGGTGGAGTAGTTCAGAATCAACTGACGCAGCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 72 bp TCTCTGTCTGTAAGATCCCGGCCACGGTTAACACACTaGGGAACCAAACGCCGCTCAGCATCTTTAGGCACC +
Preference number: 6 (lower is better)
Translates to: SLSVRSRPRLTH*GTKRRSASLGT
Trigger: GGTGCCTAAAGATGCTGAGCGGCGTTTGGTTCCTCAGTGTGTTAACCGTGGCCGGGATCTTACAGACAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp GGTATCTCGAAGAGATCTCGGGCAGCTCGCCCGTCTTaGGCTCCCAGCAGAAATCGCAATCGCTTTAGGAAA +
Preference number: 6 (lower is better)
Translates to: GISKRSRAARPS*APSRNRNRFRK
Trigger: TTTCCTAAAGCGATTGCGATTTCTGCTGGGAGCTCAAGACGGGCGAGCTGCCCGAGATCTCTTCGAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp AGGTCTTGCCTGGTCAGCTGGGTCACGTCTTTCCCATaGAACCTAAAGGGAGTCTCACAGACAATCTCTCCC +
Preference number: 6 (lower is better)
Translates to: RSCLVSWVTSFP*NLKGVSQTISP
Trigger: GGGAGAGATTGTCTGTGAGACTCCCTTTAGGTTGCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 72 bp CTGGAATCACTGGCACTTTTTCTGGGACAGAGGTCTTaGCTGGTCAGCTGGGTCACGTCTTTCCCATGCAAC +
Preference number: 6 (lower is better)
Translates to: LESLALFLGQRS*LVSWVTSFPCN
Trigger: GTTGCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTGATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 72 bp CCAAATGATGTGCCTGTCCCACAAAACACTTCAGCTTaGTTTCCCGGAGTCCCACTGCCTGGCCAAATGTGG +
Preference number: 6 (lower is better)
Translates to: PNDVPVPQNTSA*FPGVPLPGQMW
Trigger: CCACATTTGGCCAGGCAGTGGGACTCCGGGAAAGCAAGCTGAAGTGTTTTGTGGGACAGGCACATCATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp GCACTTTTTCTGGGACAGAGGTCTTGCCTGGTCAGCTaGGTCACGTCTTTCCCATGCAACCTAAAGGGAGTC +
Preference number: 6 (lower is better)
Translates to: ALFLGQRSCLVS*VTSFPCNLKGV
Trigger: GACTCCCTTTAGGTTGCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGAAAAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp AGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTGCCTCTTTGCTACAGGACTGGTGCCCCACT +
Preference number: 6 (lower is better)
Translates to: RESVCVCVCVCV*CASLLQDWCPT
Trigger: AGTGGGGCACCAGTCCTGTAGCAAAGAGGCACACCACACACACACACACACACACACACACACACTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp AGTGGCTTTGCAAAGCTCAATTCCCGGCTGCGTCAGTaGATTCTGAACTACTCCACCTCCAACCTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: SGFAKLNSRLRQ*ILNYSTSNLAG
Trigger: GCCAGCCAGGTTGGAGGTGGAGTAGTTCAGAATCAACTGACGCAGCCGGGAATTGAGCTTTGCAAAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp CAGCCCTGTGGATGGCCTCCCACCCTGTATTGCAATTaGATCATTAGATGGAAGCAGTCTGATGCAGTGGGA +
Preference number: 6 (lower is better)
Translates to: QPCGWPPTLYCN*IIRWKQSDAVG
Trigger: TCCCACTGCATCAGACTGCTTCCATCTAATGATGCAATTGCAATACAGGGTGGGAGGCCATCCACAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp GAGGGACAGCCCTGTGGATGGCCTCCCACCCTGTATTaGAATTGCATCATTAGATGGAAGCAGTCTGATGCA +
Preference number: 6 (lower is better)
Translates to: EGQPCGWPPTLY*NCIIRWKQSDA
Trigger: TGCATCAGACTGCTTCCATCTAATGATGCAATTGCAATACAGGGTGGGAGGCCATCCACAGGGCTGTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp GCTCTCTTGGTGTGGCCTGCTTTTCTAGCAGCTCAGTaGCACTTATTGTGTAAGCAGGTGTGGCTGGCTCTT +
Preference number: 6 (lower is better)
Translates to: ALLVWPAFLAAQ*HLLCKQVWLAL
Trigger: AAGAGCCAGCCACACCTGCTTACACAATAAGTGCCACTGAGCTGCTAGAAAAGCAGGCCACACCAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp AACTTTGCCTGTCCTTTGACACAGTCACTCGAGGAGTaGGACGATTTCTCATTTTGGGCGGCCGGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: NFACPLTQSLEE*DDFSFWAAGWL
Trigger: AAGCCAGCCGGCCGCCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp TGCGCTGGGAAGTTCCTTGACTCGCTCAGCAATATTTaGATACAGCAGCTCAGGCTCTCTTGGTGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: CAGKFLDSLSNI*IQQLRLSWCGL
Trigger: CAGGCCACACCAAGAGAGCCTGAGCTGCTGTATCAAAATATTGCTGAGCGAGTCAAGGAACTTCCCAGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp TTCCCCCTGAGGTCTAAGTGGGTCAGCAGGACAAAGCGGAACACATaGCTGGGCAGTGAAAGCAGAAGGTTGTCATTCAGGATGAGCACT +
Preference number: 6 (lower is better)
Translates to: FPLRSKWVSRTKRNT*LGSESRRLSFRMST
Trigger: AGTGCTCATCCTGAATGACAACCTTCTGCTTTCACTGCCCAGCAATGTGTTCCGCTTTGTCCTGCTGACCCACTTAGACCTCAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp TTCCTTGCAAGTGGCTTTGCAAAGCTCAATTCCCGGCTGCGTCAGTaGATTCTGAACTACTCCACCTCCAACCTGGGTTCTGATCTGGCT +
Preference number: 6 (lower is better)
Translates to: FLASGFAKLNSRLRQ*ILNYSTSNLGSDLA
Trigger: AGCCAGATCAGAACCCAGGTTGGAGGTGGAGTAGTTCAGAATCAACTGACGCAGCCGGGAATTGAGCTTTGCAAAGCCACTTGCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS TCA 72 bp TCTTGGCAGTTTACATTCAGACCATTGTCTGAGCTCTaGGAGGTGCAGACACAGCTGCTGGGACAGGTGAGA +
Preference number: 6 (lower is better)
Translates to: SWQFTFRPLSEL*EVQTQLLGQVR
Trigger: TCTCACCTGTCCCAGCAGCTGTGTCTGCACCTCTCAGAGCTCAGACAATGGTCTGAATGTAAACTGCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp TCCGGTTCTGATTGCGGCTTAGCTTGCAGTAAAGGGTaGTTGGGTTTTGACTGCCCCACAAAGCATTTCCTG +
Preference number: 6 (lower is better)
Translates to: SGSDCGLACSKG*LGFDCPTKHFL
Trigger: CAGGAAATGCTTTGTGGGGCAGTCAAAACCCAACCACCCTTTACTGCAAGCTAAGCCGCAATCAGAACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp TACTCCACCTCCAACCTGGGTTCTGATCTGGCTCTGTaGCTAGATGTGCCACTAGCTTCTGGATCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: YSTSNLGSDLAL*LDVPLASGSSC
Trigger: ACAGGAAGATCCAGAAGCTAGTGGCACATCTAGCAACAGAGCCAGATCAGAACCCAGGTTGGAGGTGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS CAA 72 bp AGTGGCTTTGCAAAGCTCAATTCCCGGCTGCGTCAGTaGATTCTGAACTACTCCACCTCCAACCTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: SGFAKLNSRLRQ*ILNYSTSNLGS
Trigger: AGAACCCAGGTTGGAGGTGGAGTAGTTCAGAATCAACTGACGCAGCCGGGAATTGAGCTTTGCAAAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS CAA 72 bp AGGTCTAAGTGGGTCAGCAGGACAAAGCGGAACACATaGCTGGGCAGTGAAAGCAGAAGGTTGTCATTCAGG +
Preference number: 6 (lower is better)
Translates to: RSKWVSRTKRNT*LGSESRRLSFR
Trigger: CCTGAATGACAACCTTCTGCTTTCACTGCCCAGCAATGTGTTCCGCTTTGTCCTGCTGACCCACTTAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp GGTTCTGATTGCGGCTTAGCTTGCAGTAAAGGGTGGTaGGGTTTTGACTGCCCCACAAAGCATTTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: GSDCGLACSKGW*GFDCPTKHFLG
Trigger: TCCCAGGAAATGCTTTGTGGGGCAGTCAAAACCCAACCACCCTTTACTGCAAGCTAAGCCGCAATCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp ATTCTGAACTACTCCACCTCCAACCTGGGTTCTGATCTGGCTCTGTaGCTAGATGTGCCACTAGCTTCTGGATCTTCCTGTGTCCATCGA +
Preference number: 6 (lower is better)
Translates to: ILNYSTSNLGSDLAL*LDVPLASGSSCVHR
Trigger: TCGATGGACACAGGAAGATCCAGAAGCTAGTGGCACATCTAGCAACAGAGCCAGATCAGAACCCAGGTTGGAGGTGGAGTAGTTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS TCA 72 bp GTTGATTCTGAACTACTCCACCTCCAACCTGGGTTCTaGTCTGGCTCTGTTGCTAGATGTGCCACTAGCTTC +
Preference number: 6 (lower is better)
Translates to: VDSELLHLQPGF*SGSVARCATSF
Trigger: GAAGCTAGTGGCACATCTAGCAACAGAGCCAGATCAGAACCCAGGTTGGAGGTGGAGTAGTTCAGAATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335565.6
CDS TCA 72 bp GGTCAGCAGGACAAAGCGGAACACATTGCTGGGCAGTaGAAGCAGAAGGTTGTCATTCAGGATGAGCACTTT +
Preference number: 6 (lower is better)
Translates to: GQQDKAEHIAGQ*KQKVVIQDEHF
Trigger: AAAGTGCTCATCCTGAATGACAACCTTCTGCTTTCACTGCCCAGCAATGTGTTCCGCTTTGTCCTGCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 72 bp GACTTGGTCTGGTACACCATGATGGGTCCAAAACTTTaGCTGTCCTTTGACACAGTCACTCGAGGAGTTGGA +
Preference number: 6 (lower is better)
Translates to: DLVWYTMMGPKL*LSFDTVTRGVG
Trigger: TCCAACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTTTTGGACCCATCATGGTGTACCAGACCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp TTTTCTTCGCACAGACAGCGGATCTTGCAAATGTCTTTGGCAGTTTaGCGACTCTCTGTCTGTAAGATCCCGGCCACGGTTAACACACTG +
Preference number: 6 (lower is better)
Translates to: FSSHRQRILQMSLAV*RLSVCKIPATVNTL
Trigger: CAGTGTGTTAACCGTGGCCGGGATCTTACAGACAGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTGTCTGTGCGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp ATTGAAAGGAGCTTACGTCTAAGTTGTTGGTATTCCTaGGAACGCTCGGCACTCCCTTTCGGCGTTTCAAGA +
Preference number: 6 (lower is better)
Translates to: IERSLRLSCWYS*ERSALPFGVSR
Trigger: TCTTGAAACGCCGAAAGGGAGTGCCGAGCGTTCCCAGGAATACCAACAACTTAGACGTAAGCTCCTTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp CATACTGTAATTGAAAGGAGCTTACGTCTAAGTTGTTaGTATTCCTGGGAACGCTCGGCACTCCCTTTCGGC +
Preference number: 6 (lower is better)
Translates to: HTVIERSLRLSC*YSWERSALPFG
Trigger: GCCGAAAGGGAGTGCCGAGCGTTCCCAGGAATACCAACAACTTAGACGTAAGCTCCTTTCAATTACAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CCA 72 bp TGGCCTCCCACCCTGTATTGCAATTGCATCATTAGATaGAAGCAGTCTGATGCAGTGGGAGCACAATTAAGC +
Preference number: 6 (lower is better)
Translates to: WPPTLYCNCIIR*KQSDAVGAQLS
Trigger: GCTTAATTGTGCTCCCACTGCATCAGACTGCTTCCATCTAATGATGCAATTGCAATACAGGGTGGGAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 90 bp TTAGCAGGAGATTCGCAAGTCACCTCATTAATGATGACAGGGGAATaGGCATGTTCTGTCCAGTCTTTCAGCCCCATGATGTCACAGGTA +
Preference number: 6 (lower is better)
Translates to: LAGDSQVTSLMMTGE*ACSVQSFSPMMSQV
Trigger: TACCTGTGACATCATGGGGCTGAAAGACTGGACAGAACATGCCAATTCCCCTGTCATCATTAATGAGGTGACTTGCGAATCTCCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp GTACACCATGATGGGTCCAAAACTTTGCCTGTCCTTTaGCACAGTCACTCGAGGAGTTGGACGATTTCTCAT +
Preference number: 6 (lower is better)
Translates to: VHHDGSKTLPVL*HSHSRSWTISH
Trigger: ATGAGAAATCGTCCAACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTTTTGGACCCATCATGGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp AGGAGGGAATCAACCAGGGAAAAGGAGTTGACCAAATaGTGTGCCTGTCCCACAAAACACTTCAGCTTGCTT +
Preference number: 6 (lower is better)
Translates to: RRESTREKELTK*CACPTKHFSLL
Trigger: AAGCAAGCTGAAGTGTTTTGTGGGACAGGCACATCATTTGGTCAACTCCTTTTCCCTGGTTGATTCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp CAGGATGAGCACTTTGAGCTTGTTAAGTTTGCTGAATaGCCCAGCCTCGATGGCACTGATGTAATTGTAGTC +
Preference number: 6 (lower is better)
Translates to: QDEHFELVKFAE*PSLDGTDVIVV
Trigger: GACTACAATTACATCAGTGCCATCGAGGCTGGGGCATTCAGCAAACTTAACAAGCTCAAAGTGCTCATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 72 bp GGCTTAGCTTGCAGTAAAGGGTGGTTGGGTTTTGACTaGCCCACAAAGCATTTCCTGGGAGTTCCATATAAA +
Preference number: 6 (lower is better)
Translates to: GLACSKGWLGFD*PTKHFLGVPYK
Trigger: TTTATATGGAACTCCCAGGAAATGCTTTGTGGGGCAGTCAAAACCCAACCACCCTTTACTGCAAGCTAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS GCA 72 bp GACCAGGCATCAGAAGCCCCCTTACCCTCTAATTCTTaGTTGGCGTTTAGCAAAATACTTTCCTTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: DQASEAPLPSNS*LAFSKILSFWR
Trigger: TCTCCAGAAGGAAAGTATTTTGCTAAACGCCAAGCAAGAATTAGAGGGTAAGGGGGCTTCTGATGCCTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp CACAAAACACTTCAGCTTGCTTTCCCGGAGTCCCACTaGCTGGCCAAATGTGGAATAGATAAACACACAGAT +
Preference number: 6 (lower is better)
Translates to: HKTLQLAFPESH*LAKCGIDKHTD
Trigger: ATCTGTGTGTTTATCTATTCCACATTTGGCCAGGCAGTGGGACTCCGGGAAAGCAAGCTGAAGTGTTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS GCA 72 bp CATTGTGGAATCAATTCGCAAGGGGTAAATAATGTCTaGTGTTGCCTGGAAAGGCCTTGGTTGCCTCTGGTA +
Preference number: 6 (lower is better)
Translates to: HCGINSQGVNNV*CCLERPWLPLV
Trigger: TACCAGAGGCAACCAAGGCCTTTCCAGGCAACAGCAGACATTATTTACCCCTTGCGAATTGATTCCACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp CAGGCATCAGAAGCCCCCTTACCCTCTAATTCTTGCTaGGCGTTTAGCAAAATACTTTCCTTCTGGAGACTC +
Preference number: 6 (lower is better)
Translates to: QASEAPLPSNSC*AFSKILSFWRL
Trigger: GAGTCTCCAGAAGGAAAGTATTTTGCTAAACGCCAAGCAAGAATTAGAGGGTAAGGGGGCTTCTGATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 90 bp AGCAGGACAAAGCGGAACACATTGCTGGGCAGTGAAAGCAGAAGGTaGTCATTCAGGATGAGCACTTTGAGCTTGTTAAGTTTGCTGAAT +
Preference number: 6 (lower is better)
Translates to: SRTKRNTLLGSESRR*SFRMSTLSLLSLLN
Trigger: ATTCAGCAAACTTAACAAGCTCAAAGTGCTCATCCTGAATGACAACCTTCTGCTTTCACTGCCCAGCAATGTGTTCCGCTTTGTCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp CAGACAATCTCTCCCACAAAAACAGTTATGGTGTCTAGCCAGGCCTaGAGAGGAAGTAAGTCACAAGTGCAATTCCATGGATTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: QTISPTKTVMVSSQA*RGSKSQVQFHGFSS
Trigger: GGAGGAAAATCCATGGAATTGCACTTGTGACTTACTTCCTCTCAAGGCCTGGCTAGACACCATAACTGTTTTTGTGGGAGAGATTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp CTGCGTAAACTGGTCAGGTTTGTAAAGGCACCTTCCTaGATGACTGCAATCCTGTTGTTTCCTAAGTGCAGT +
Preference number: 6 (lower is better)
Translates to: LRKLVRFVKAPS*MTAILLFPKCS
Trigger: ACTGCACTTAGGAAACAACAGGATTGCAGTCATTCAGGAAGGTGCCTTTACAAACCTGACCAGTTTACGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp GGAGACACACTAAGCGACCGAGGTGTGTCTGTATTGTaGTTCATTGACAAGACGGTTCCATCTGACAAGTTT +
Preference number: 6 (lower is better)
Translates to: GDTLSDRGVSVL*FIDKTVPSDKF
Trigger: AAACTTGTCAGATGGAACCGTCTTGTCAATGAATCACAATACAGACACACCTCGGTCGCTTAGTGTGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp ATGTCCTTGTTTCCAACAGTTCGGAGCAGCATCCTCTaGTGCCTTAGGGTTGTAAATGATTTCCCTTCACAG +
Preference number: 6 (lower is better)
Translates to: MSLFPTVRSSIL*CLRVVNDFPSQ
Trigger: CTGTGAAGGGAAATCATTTACAACCCTAAGGCATCAGAGGATGCTGCTCCGAACTGTTGGAAACAAGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp CCTGATTCAGTGCTAAGAGAATTCCTTTCTGGGTGGTaGCCCACCAAACATATTTGCCTGGACTCTGAAAGT +
Preference number: 6 (lower is better)
Translates to: PDSVLREFLSGW*PTKHICLDSES
Trigger: ACTTTCAGAGTCCAGGCAAATATGTTTGGTGGGTCACCACCCAGAAAGGAATTCTCTTAGCACTGAATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CCA 72 bp AGGCATCAGAAGCCCCCTTACCCTCTAATTCTTGCTTaGCGTTTAGCAAAATACTTTCCTTCTGGAGACTCA +
Preference number: 6 (lower is better)
Translates to: RHQKPPYPLILA*RLAKYFPSGDS
Trigger: TGAGTCTCCAGAAGGAAAGTATTTTGCTAAACGCCAAGCAAGAATTAGAGGGTAAGGGGGCTTCTGATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp AAGCGGAACACATTGCTGGGCAGTGAAAGCAGAAGGTaGTCATTCAGGATGAGCACTTTGAGCTTGTTAAGT +
Preference number: 6 (lower is better)
Translates to: KRNTLLGSESRR*SFRMSTLSLLS
Trigger: ACTTAACAAGCTCAAAGTGCTCATCCTGAATGACAACCTTCTGCTTTCACTGCCCAGCAATGTGTTCCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp TCTCCCACAAAAACAGTTATGGTGTCTAGCCAGGCCTaGAGAGGAAGTAAGTCACAAGTGCAATTCCATGGA +
Preference number: 6 (lower is better)
Translates to: SPTKTVMVSSQA*RGSKSQVQFHG
Trigger: TCCATGGAATTGCACTTGTGACTTACTTCCTCTCAAGGCCTGGCTAGACACCATAACTGTTTTTGTGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp GAGAAAGGTGGAGGTGGTTGGGGGCTCATGAGATTCTaGAGACCTACAGAATCAAGGAAATTCATGGGTAAT +
Preference number: 6 (lower is better)
Translates to: EKGGGGWGLMRF*RPTESRKFMGN
Trigger: ATTACCCATGAATTTCCTTGATTCTGTAGGTCTCAAGAATCTCATGAGCCCCCAACCACCTCCACCTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 90 bp AGATTCAGAGAGAAAGGTGGAGGTGGTTGGGGGCTCATGAGATTCTaGAGACCTACAGAATCAAGGAAATTCATGGGTAATCTAACTGTG +
Preference number: 6 (lower is better)
Translates to: RFREKGGGGWGLMRF*RPTESRKFMGNLTV
Trigger: CACAGTTAGATTACCCATGAATTTCCTTGATTCTGTAGGTCTCAAGAATCTCATGAGCCCCCAACCACCTCCACCTTTCTCTCTGAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp AAGGTGTCCTCCCTCAATATCTCAAGCTTGTTGTTGTaGAGATGCAGTCTTTTGAGAGTTTTCAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: KVSSLNISSLLL*RCSLLRVFRPL
Trigger: CAGTGGCCTGAAAACTCTCAAAAGACTGCATCTCAACAACAACAAGCTTGAGATATTGAGGGAGGACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp CCTAGGAAGGTGTCCTCCCTCAATATCTCAAGCTTGTaGTTGTTGAGATGCAGTCTTTTGAGAGTTTTCAGG +
Preference number: 6 (lower is better)
Translates to: PRKVSSLNISSL*LLRCSLLRVFR
Trigger: CCTGAAAACTCTCAAAAGACTGCATCTCAACAACAACAAGCTTGAGATATTGAGGGAGGACACCTTCCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 72 bp AGGCCTAGGAAGGTGTCCTCCCTCAATATCTCAAGCTaGTTGTTGTTGAGATGCAGTCTTTTGAGAGTTTTC +
Preference number: 6 (lower is better)
Translates to: RPRKVSSLNISS*LLLRCSLLRVF
Trigger: GAAAACTCTCAAAAGACTGCATCTCAACAACAACAAGCTTGAGATATTGAGGGAGGACACCTTCCTAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS TCA 72 bp TGTTACCTAGGTGAAGAGTCACCGCGTTGGAGTAATTaGCAAATTCGTTTGGATACAGTCTTGTCAAGAGGT +
Preference number: 6 (lower is better)
Translates to: CYLGEESPRWSN*QIRLDTVLSRG
Trigger: ACCTCTTGACAAGACTGTATCCAAACGAATTTGTCAATTACTCCAACGCGGTGACTCTTCACCTAGGTAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335565.6
ENST00000370490.1
CDS CAA 90 bp CCAGCTCTGATATCCAATGCGGGTTTAAATAGCCTTTCCAGAGCATaGCTAATGGCCAGGTGTTGGATTTTTGCCTTCATTATCTGTTTT +
Preference number: 6 (lower is better)
Translates to: PALISNAGLNSLSRA*LMARCWIFAFIICF
Trigger: AAAACAGATAATGAAGGCAAAAATCCAACACCTGGCCATTAGCAATGCTCTGGAAAGGCTATTTAAACCCGCATTGGATATCAGAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 72 bp TTTATAAACTTAGGCACTAGGGCCACCTGTAGCTGGTaGTCTGTGCATTATTTTCTTGAGCTTTCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: FINLGTRATCSW*SVHYFLELSPF
Trigger: AAAGGGAGAAAGCTCAAGAAAATAATGCACAGATCACCAGCTACAGGTGGCCCTAGTGCCTAAGTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp ATATCCAATGCGGGTTTAAATAGCCTTTCCAGAGCATaGCTAATGGCCAGGTGTTGGATTTTTGCCTTCATT +
Preference number: 6 (lower is better)
Translates to: ISNAGLNSLSRA*LMARCWIFAFI
Trigger: AATGAAGGCAAAAATCCAACACCTGGCCATTAGCAATGCTCTGGAAAGGCTATTTAAACCCGCATTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS TCA 72 bp GCTTTCCAAAACGTAGTTACTAGGAACAAATCAGCCTaGAACGCGATAACCACTTTAAGTAAGTTTCATTTG +
Preference number: 6 (lower is better)
Translates to: AFQNVVTRNKSA*NAITTLSKFHL
Trigger: CAAATGAAACTTACTTAAAGTGGTTATCGCGTTTCAGGCTGATTTGTTCCTAGTAACTACGTTTTGGAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370490.1
CDS CAA 72 bp TTTCGGTTCTCAGATACAGTAATTTCCTTCAAGACATaGATGACGCTTTCAATATTCCTTGAGGACAGATTA +
Preference number: 6 (lower is better)
Translates to: FRFSDTVISFKT*MTLSIFLEDRL
Trigger: TAATCTGTCCTCAAGGAATATTGAAAGCGTCATCAATGTCTTGAAGGAAATTACTGTATCTGAGAACCGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370490.1