RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLIT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000184347

Ensembl transcript IDs: ENST00000332966.8, ENST00000404867.7, ENST00000518092.1, ENST00000518140.5, ENST00000519486.5, ENST00000519560.6, ENST00000521130.1, ENST00000521150.1

Found 1289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGCCCTTTTGCTGTCTTGGTTGATGGGGGCTGGATTCAGGATTaGGCCCAGGGTGATGAGCAGAGGGAGGTCTCAGGTTCCTTGGGG +
Preference number: 1 (lower is better)
Translates to: PGPFAVLVDGGWIQD*AQGDEQREVSGSLG
Trigger: CCCCAAGGAACCTGAGACCTCCCTCTGCTCATCACCCTGGGCCCAATCCTGAATCCAGCCCCCATCAACCAAGACAGCAAAAGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 90 bp GGAAGGAGGAGAGAGGGCCAGTGCATGGGTCCTGAGGAGACACCATaGTATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: GRRREGQCMGPEETP*YSLPSPPLGRPLSW
Trigger: CCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGTGTCTCCTCAGGACCCATGCACTGGCCCTCTCTCCTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATaGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: LQLHFLHAESPGGPT*LSQLHQAGVREVAG
Trigger: GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp ATAAGGGACAGACCTGGCCCTTTTGCTGTCTTGGTTGATGGGGGCTaGATTCAGGATTGGGCCCAGGGTGATGAGCAGAGGGAGGTCTCA +
Preference number: 1 (lower is better)
Translates to: IRDRPGPFAVLVDGG*IQDWAQGDEQREVS
Trigger: TGAGACCTCCCTCTGCTCATCACCCTGGGCCCAATCCTGAATCCAGCCCCCATCAACCAAGACAGCAAAAGGGCCAGGTCTGTCCCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp GAACCTTCCAGAGTTGGACATCTAGCGCTGTGGGCAGACTTGACTTaGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGACTACCTTCTCT +
Preference number: 1 (lower is better)
Translates to: EPSRVGHLALWADLT*LPAFRFQEGLTTFS
Trigger: AGAGAAGGTAGTCAGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp AACAAGAGCCTCCAAGAACCTTCCAGAGTTGGACATCTAGCGCTGTaGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGG +
Preference number: 1 (lower is better)
Translates to: NKSLQEPSRVGHLAL*ADLTWLPAFRFQEG
Trigger: CCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTCTTGGAGGCTCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp GGGCAAGGAGTCTCTATCGTCATGCTGGTGACCTGGAGGATCAGGTaGCAGAGGCCTGTCTTACAACAAGAGCCTCCAAGAACCTTCCAG +
Preference number: 1 (lower is better)
Translates to: GQGVSIVMLVTWRIR*QRPVLQQEPPRTFQ
Trigger: CTGGAAGGTTCTTGGAGGCTCTTGTTGTAAGACAGGCCTCTGCCACCTGATCCTCCAGGTCACCAGCATGACGATAGAGACTCCTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp GAGAGACATGGAAAGAAACAGGGGCAGGGAAGTCCCCTTCAGGAATaGAGGCAGAGGCTGGATAGGCTGCCCTTGGTCACTTTCCCTAGA +
Preference number: 1 (lower is better)
Translates to: ERHGKKQGQGSPLQE*RQRLDRLPLVTFPR
Trigger: TCTAGGGAAAGTGACCAAGGGCAGCCTATCCAGCCTCTGCCTCCATTCCTGAAGGGGACTTCCCTGCCCCTGTTTCTTTCCATGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR GCA 90 bp CCCTTCCTCAAACAACCCTGCTGGCACCTGTGGCCCAGTTTAGCATaGACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCCCA +
Preference number: 1 (lower is better)
Translates to: PFLKQPCWHLWPSLA*TALCGQNPTFLPTP
Trigger: TGGGGTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCACAGGTGCCAGCAGGGTTGTTTGAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp CAGAGGCCTGTCTTACAACAAGAGCCTCCAAGAACCTTCCAGAGTTaGACATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTT +
Preference number: 1 (lower is better)
Translates to: QRPVLQQEPPRTFQS*TSSAVGRLDLAPSL
Trigger: AAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTCTTGGAGGCTCTTGTTGTAAGACAGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp AGTGTCACAGATGGGCAAGGAGTCTCTATCGTCATGCTGGTGACCTaGAGGATCAGGTGGCAGAGGCCTGTCTTACAACAAGAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: SVTDGQGVSIVMLVT*RIRWQRPVLQQEPP
Trigger: TGGAGGCTCTTGTTGTAAGACAGGCCTCTGCCACCTGATCCTCCAGGTCACCAGCATGACGATAGAGACTCCTTGCCCATCTGTGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp ACCCTGCTGGCACCTGTGGCCCAGTTTAGCATGCACAGCTCTTTGTaGTCAAAACCCTACCTTCCTACCTACCCCATTTCTCTCTGCTCC +
Preference number: 1 (lower is better)
Translates to: TLLAPVAQFSMHSSL*SKPYLPTYPISLCS
Trigger: GGAGCAGAGAGAAATGGGGTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCACAGGTGCCAGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 90 bp TGGAAAGTGTCACAGATGGGCAAGGAGTCTCTATCGTCATGCTGGTaGCCTGGAGGATCAGGTGGCAGAGGCCTGTCTTACAACAAGAGC +
Preference number: 1 (lower is better)
Translates to: WKVSQMGKESLSSCW*PGGSGGRGLSYNKS
Trigger: GCTCTTGTTGTAAGACAGGCCTCTGCCACCTGATCCTCCAGGTCACCAGCATGACGATAGAGACTCCTTGCCCATCTGTGACACTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR GCA 90 bp TCCGGCAGGGCTGCTCTGATGGATTTAAGCCGCCTGAATCACCTGTaGTCACCCATTCTAGAGGAAGAATCTCAAGCTTTGGGTCTGGAC +
Preference number: 1 (lower is better)
Translates to: SGRAALMDLSRLNHL*SPILEEESQALGLD
Trigger: GTCCAGACCCAAAGCTTGAGATTCTTCCTCTAGAATGGGTGAGCACAGGTGATTCAGGCGGCTTAAATCCATCAGAGCAGCCCTGCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp GCTTGTCTTGCTCTTCCCTTCCTCAAACAACCCTGCTGGCACCTGTaGCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACC +
Preference number: 1 (lower is better)
Translates to: ACLALPFLKQPCWHL*PSLACTALCGQNPT
Trigger: GGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCACAGGTGCCAGCAGGGTTGTTTGAGGAAGGGAAGAGCAAGACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp CTGGCAATAGCTTTGTTTCTGGTGAAGGGAAAGGTTAGATCATCCTaGTCCTGGCCTTTCCTGAAGGTCACCCTGGGGCTCTTTTCCCCC +
Preference number: 1 (lower is better)
Translates to: LAIALFLVKGKVRSS*SWPFLKVTLGLFSP
Trigger: GGGGGAAAAGAGCCCCAGGGTGACCTTCAGGAAAGGCCAGGACCAGGATGATCTAACCTTTCCCTTCACCAGAAACAAAGCTATTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp TCCTGCCTACCAGTAATGCCCTATGACTCCTCCAGCTCTGGTATCTaGGATCTTGAGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTT +
Preference number: 1 (lower is better)
Translates to: SCLPVMPYDSSSSGI*DLESEGQVTCCYGL
Trigger: AAGCCCATAGCAACAAGTGACCTGCCCCTCAGACTCAAGATCCCAGATACCAGAGCTGGAGGAGTCATAGGGCATTACTGGTAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 90 bp GATGTGTTTCTTTCCCATGAGAAGCAGGATGGTTTAGTGGTTGAGTaGGCAAGTTCTGGAGTCAGACAGCCTGGGCCCAGATCCTGGCTC +
Preference number: 1 (lower is better)
Translates to: DVFLSHEKQDGLVVE*ASSGVRQPGPRSWL
Trigger: GAGCCAGGATCTGGGCCCAGGCTGTCTGACTCCAGAACTTGCTCACTCAACCACTAAACCATCCTGCTTCTCATGGGAAAGAAACACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 90 bp CTCTGCTCCTCAGTGTGCTTCCCATACTCTTGCCACCCTAGATTTTaGCTCTTCCCCAAACAAGCCAGGCCTGGCCATATCTCATTGCTT +
Preference number: 1 (lower is better)
Translates to: LCSSVCFPYSCHPRF*LFPKQARPGHISLL
Trigger: AAGCAATGAGATATGGCCAGGCCTGGCTTGTTTGGGGAAGAGTCAAAATCTAGGGTGGCAAGAGTATGGGAAGCACACTGAGGAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 90 bp CTTCCAAGAAGGGCTGACTACCTTCTCTACTGGGATACATTCCAATaGAAAATTACCTGGAAGGAGGAGAGAGGGCCAGTGCATGGGTCC +
Preference number: 1 (lower is better)
Translates to: LPRRADYLLYWDTFQ*KITWKEERGPVHGS
Trigger: GGACCCATGCACTGGCCCTCTCTCCTCCTTCCAGGTAATTTTTCATTGGAATGTATCCCAGTAGAGAAGGTAGTCAGCCCTTCTTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 90 bp GGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTGGGTaGCTGCTTGACTTTAGGGTTCAGTCTGGCAATAGCTTTGTTTCT +
Preference number: 1 (lower is better)
Translates to: GHLLLWASAPSKGSG*LLDFRVQSGNSFVS
Trigger: AGAAACAAAGCTATTGCCAGACTGAACCCTAAAGTCAAGCAGTCACCCACTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 90 bp GGATCCTCTTCAAGAGCAGAGCTTCTAAGCTACCATAGACATTTGTaGTCCATCTGGCCGGCAGTGTTTTCTAGCCACAGAGTAAACCAC +
Preference number: 1 (lower is better)
Translates to: GSSSRAELLSYHRHL*SIWPAVFSSHRVNH
Trigger: GTGGTTTACTCTGTGGCTAGAAAACACTGCCGGCCAGATGGATCACAAATGTCTATGGTAGCTTAGAAGCTCTGCTCTTGAAGAGGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp GAGGAGCCTCATTTCGGGGAGAATTTTCTTAATGGTCCTTGCATTTaGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAGGCT +
Preference number: 1 (lower is better)
Translates to: EEPHFGENFLNGPCI*HFLKSGLPNLREKA
Trigger: AGCCTTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCCGAAATGAGGCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR GCA 90 bp TTGTTAGAGGAGCCTCATTTCGGGGAGAATTTTCTTAATGGTCCTTaGATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAG +
Preference number: 1 (lower is better)
Translates to: LLEEPHFGENFLNGP*IWHFLKSGLPNLRE
Trigger: CTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCCGAAATGAGGCTCCTCTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 90 bp TCTCTCTTCCTCTTATTCCTTTTTCTGATCTCAATGAGCAGCTCTTaGTCTACTGCCGACATAATACCGTTTCATAAACATGAAAACATC +
Preference number: 1 (lower is better)
Translates to: SLFLLFLFLISMSSS*STADIIPFHKHENI
Trigger: GATGTTTTCATGTTTATGAAACGGTATTATGTCGGCAGTAGACCAAGAGCTGCTCATTGAGATCAGAAAAAGGAATAAGAGGAAGAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp CTCCAAGAACCTTCCAGAGTTGGACATCTAGCGCTGTGGGCAGACTaGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGACTACC +
Preference number: 2 (lower is better)
Translates to: LQEPSRVGHLALWAD*TWLPAFRFQEGLTT
Trigger: GGTAGTCAGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTTGGTTGATGGGGGCTaGATTCAGGATTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQLVDGG*IQDWAQ
Trigger: CTGGGCCCAATCCTGAATCCAGCCCCCATCAACCAA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp AGAACCTTCCAGAGTTGGACATCTAGCGCTGTGGGCAGACTTGACTaGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGACTACCTTCTC +
Preference number: 2 (lower is better)
Translates to: RTFQSWTSSAVGRLD*APSLPLPRRADYLL
Trigger: GAGAAGGTAGTCAGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAACTCCATCAAGCTaGAGTCCGAGAGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCPTPSS*SPRGGR
Trigger: CCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTGGGGAAATGGAGGTTaGGAAGGGTGTTGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQWGNGG*EGCWAD
Trigger: ATCTGCCCAACACCCTTCCCAACCTCCATTTCCCCA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp GGAAGTCCCCTTCAGGAATGGAGGCAGAGGCTGGATAGGCTGCCCTaGGTCACTTTCCCTAGATGCATAAGCCCTGGTCTCCAGAATCTT +
Preference number: 2 (lower is better)
Translates to: GSPLQEWRQRLDRLP*VTFPRCISPGLQNL
Trigger: AAGATTCTGGAGACCAGGGCTTATGCATCTAGGGAAAGTGACCAAGGGCAGCCTATCCAGCCTCTGCCTCCATTCCTGAAGGGGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR GCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCGCCTGAATCACCTGTaGTCACCCATTCTAGAGGAA +
Preference number: 2 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQRLNHL*SPILEE
Trigger: TTCCTCTAGAATGGGTGAGCACAGGTGATTCAGGCG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp ACAACCCTGCTGGCACCTGTGGCCCAGTTTAGCATGCACAGCTCTTaGTGGTCAAAACCCTACCTTCCTACCTACCCCATTTCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: TTLLAPVAQFSMHSS*WSKPYLPTYPISLC
Trigger: GCAGAGAGAAATGGGGTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCACAGGTGCCAGCAGGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTGGGCAGACTTGACTTaGCTCCCAGCCTTCCGCTTC +
Preference number: 2 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYWADLT*LPAFRF
Trigger: GAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGCTAACCTGATGGGGTaGAAGGGGGCAAATGGGAGT +
Preference number: 2 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEANLMG*KGANGS
Trigger: ACTCCCATTTGCCCCCTTCCACCCCATCAGGTTAGC...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCTCTCAAGTCCATTTTaGGTGACAGCTCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQLSSPF*VTALSP
Trigger: AGGAGACAGAGCTGTCACCCAAAATGGACTTGAGAG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTATAAGGGACAGACCTaGCCCTTTTGCTGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQYKGQT*PFCCLG
Trigger: ACCAAGACAGCAAAAGGGCCAGGTCTGTCCCTTATA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCCTATCGTCATGCTGGTaGCCTGGAGGATCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: IPSFFPSFLLPVASFSSILSSCW*PGGSGG
Trigger: GCCACCTGATCCTCCAGGTCACCAGCATGACGATAG...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTTGCCACACAAACACTaGACCACACTTTTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQLPHKH*TTLFQE
Trigger: CTCCTGAAAAAGTGTGGTTCAGTGTTTGTGTGGCAA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR GCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCTTTTCCGGCAGGGCTaGTCTGATGGATTTAAGCCG +
Preference number: 2 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYLFRQG*SDGFKP
Trigger: CGGCTTAAATCCATCAGAGCAGCCCTGCCGGAAAAG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR GCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCTCTGCTCCTCAGTGTaGTTCCCATACTCTTGCCAC +
Preference number: 2 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYLCSSV*FPYSCH
Trigger: GTGGCAAGAGTATGGGAAGCACACTGAGGAGCAGAG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp CTGAATCACCTGTGCTCACCCATTCTAGAGGAAGAATCTCAAGCTTaGGGTCTGGACTTCTGGTCTGGCTCCTCCACTTATCTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: LNHLCSPILEEESQA*GLDFWSGSSTYLVC
Trigger: ACACACCAGATAAGTGGAGGAGCCAGACCAGAAGTCCAGACCCAAAGCTTGAGATTCTTCCTCTAGAATGGGTGAGCACAGGTGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp TCTTTTCTTTCTCCCTTCATTATTCCCTGCGTCTTTGGCCCACCATaGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGGC +
Preference number: 2 (lower is better)
Translates to: SFLSPFIIPCVFGPP*VLTDQLGSSREPEG
Trigger: GCCCTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAAGACGCAGGGAATAATGAAGGGAGAAAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp GCAGTGGGTGACTGCTTGACTTTAGGGTTCAGTCTGGCAATAGCTTaGTTTCTGGTGAAGGGAAAGGTTAGATCATCCTGGTCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: AVGDCLTLGFSLAIA*FLVKGKVRSSWSWP
Trigger: AGGCCAGGACCAGGATGATCTAACCTTTCCCTTCACCAGAAACAAAGCTATTGCCAGACTGAACCCTAAAGTCAAGCAGTCACCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp TGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTGGGTGACTGCTaGACTTTAGGGTTCAGTCTGGCAATAGCTTTGTTTCTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: CCYGLLLPAKAVGDC*TLGFSLAIALFLVK
Trigger: CTTCACCAGAAACAAAGCTATTGCCAGACTGAACCCTAAAGTCAAGCAGTCACCCACTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCTCATTTCCTTCATGCTaGATCACCAGGGGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: IPSFFPSFLLPVASFSSISFPSC*ITRGSH
Trigger: GTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGA...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCCCAGTGCATGGGTCCTaGGGAGACACCATGATATTC +
Preference number: 2 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIPVHGS*GDTMIF
Trigger: GAATATCATGGTGTCTCCTCAGGACCCATGCACTGG...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTGCCACCCTAGATTTTaGCTCTTCCCCAAACAAGCC +
Preference number: 2 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYCHPRF*LFPKQA
Trigger: GGCTTGTTTGGGGAAGAGTCAAAATCTAGGGTGGCA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR GCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCAGAGGCTGGATAGGCTaGCCTTGGTCACTTTCCCTA +
Preference number: 2 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIRGWIG*PWSLSL
Trigger: TAGGGAAAGTGACCAAGGGCAGCCTATCCAGCCTCT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTGGATAGGCTGCCCTTaGTCACTTTCCCTAGATGCA +
Preference number: 2 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYWIGCP*SLSLDA
Trigger: TGCATCTAGGGAAAGTGACCAAGGGCAGCCTATCCA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCCTGAAACTCCTACAGTaGAAGCTCCTGGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: IPSFFPSFLLPVASFSSILKLLQ*KLLGEG
Trigger: TCCTTCCCCCAGGAGCTTCCACTGTAGGAGTTTCAG...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATGATATGTGGCTAACCTaGTGGGGTGGAAGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNDMWLT*WGGRGQ
Trigger: TTGCCCCCTTCCACCCCATCAGGTTAGCCACATATC...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCTGGATAGGCTGCCCTTaGTCACTTTCCCTAGATGCA +
Preference number: 2 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIWIGCP*SLSLDA
Trigger: TGCATCTAGGGAAAGTGACCAAGGGCAGCCTATCCA...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTACAGTGGAAGCTCCTaGGGGAAGGAGGGATGGATG +
Preference number: 2 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNYSGSS*GKEGWM
Trigger: CATCCATCCCTCCTTCCCCCAGGAGCTTCCACTGTA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATGGGCATTTTGGGCACTaGCATCCAGGACTCCGAAAA +
Preference number: 2 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNGHFGH*HPGLRK
Trigger: TTTTCGGAGTCCTGGATGTCAGTGCCCAAAATGCCC...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACTCAAACAACCCTGCTaGCACCTGTGGCCCAGTTTA +
Preference number: 2 (lower is better)
Translates to: WSLHLAFLKVRASKLEGELKQPC*HLWPSL
Trigger: TAAACTGGGCCACAGGTGCCAGCAGGGTTGTTTGAG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp GCCTGGGCCCAGATCCTGGCTCTACGGTTTATTAGACATTTACTCTaGGGCAAGTTCTTTAACTTCTCTGTGTCTCAGTCTACTCAACTG +
Preference number: 2 (lower is better)
Translates to: AWAQILALRFIRHLL*GKFFNFSVSQSTQL
Trigger: CAGTTGAGTAGACTGAGACACAGAGAAGTTAAAGAACTTGCCCAAGAGTAAATGTCTAATAAACCGTAGAGCCAGGATCTGGGCCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATACCATAGACATTTGTaGTCCATCTGGCCGGCAGTG +
Preference number: 2 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEYHRHL*SIWPAV
Trigger: CACTGCCGGCCAGATGGATCACAAATGTCTATGGTA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR GCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACGCCTGAATCACCTGTaGTCACCCATTCTAGAGGAA +
Preference number: 2 (lower is better)
Translates to: WSLHLAFLKVRASKLEGERLNHL*SPILEE
Trigger: TTCCTCTAGAATGGGTGAGCACAGGTGATTCAGGCG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTATTCCCTGCGTCTTTaGCCCACCATTGGTACTCAC +
Preference number: 2 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNYSLRL*PTIGTH
Trigger: GTGAGTACCAATGGTGGGCCAAAGACGCAGGGAATA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp AACTTTGGCCTGGGTGGACACATGGGGTTAATTATCTGTGTGTCTTaGGTCTATGATCACCGCATTCTTCCATTTGTTCGACCCTCAGTT +
Preference number: 2 (lower is better)
Translates to: NFGLGGHMGLIICVS*VYDHRILPFVRPSV
Trigger: AACTGAGGGTCGAACAAATGGAAGAATGCGGTGATCATAGACCAAAGACACACAGATAATTAACCCCATGTGTCCACCCAGGCCAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR GCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATCTTTCAGGCCTTTATaGTGCCACAGCTCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: WSLHLAFLKVRASKLEGESFRPL*CHSSLP
Trigger: AGGAAGAGAGCTGTGGCAGCATAAAGGCCTGAAAGA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCTCAATGAGCAGCTCTTaGTCTACTGCCGACATAATA +
Preference number: 2 (lower is better)
Translates to: IPSFFPSFLLPVASFSSISMSSS*STADII
Trigger: TATTATGTCGGCAGTAGACCAAGAGCTGCTCATTGA...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTACCTGGAGGATCAGGTaGCAGAGGCCTGTCTTACAA +
Preference number: 2 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLTWRIR*QRPVLQ
Trigger: TTGTAAGACAGGCCTCTGCCACCTGATCCTCCAGGT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACTCTCAAGTCCATTTTaGGTGACAGCTCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: WSLHLAFLKVRASKLEGELSSPF*VTALSP
Trigger: AGGAGACAGAGCTGTCACCCAAAATGGACTTGAGAG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp AATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTaGAGGGAGAAGGCTCAAAATTATAAGGGACAGACCTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: NGPCIWHFLKSGLPN*REKAQNYKGQTWPF
Trigger: AAAGGGCCAGGTCTGTCCCTTATAATTTTGAGCCTTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR GCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACAGCTCTTGGTCTACTaGCGACATAATACCGTTTCA +
Preference number: 2 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEQLLVY*RHNTVS
Trigger: TGAAACGGTATTATGTCGGCAGTAGACCAAGAGCTG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAAGAATCTCAAGCTTTaGGTCTGGACTTCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNKNLKL*VWTSGL
Trigger: CAGACCAGAAGTCCAGACCCAAAGCTTGAGATTCTT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 90 bp TCTGGACAGCCACTTCCATTGCTTGTATTGCCACTTAAGAGCTCCTaGTGTAATAAGGCAATTGTCCATTTTTATGACTGTTTTTGTCAC +
Preference number: 2 (lower is better)
Translates to: SGQPLPLLVLPLKSS*CNKAIVHFYDCFCH
Trigger: GTGACAAAAACAGTCATAAAAATGGACAATTGCCTTATTACACAAGGAGCTCTTAAGTGGCAATACAAGCAATGGAAGTGGCTGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR TCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTGGGATACATTCCAATaGAAAATTACCTGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLWDTFQ*KITWKE
Trigger: CTCCTTCCAGGTAATTTTTCATTGGAATGTATCCCA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp AGACCTGGCCCTTTTGCTGTCTTGGTTGATGGGGGCTaGATTCAGGATTGGGCCCAGGGTGATGAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: RPGPFAVLVDGG*IQDWAQGDEQR
Trigger: CCTCTGCTCATCACCCTGGGCCCAATCCTGAATCCAGCCCCCATCAACCAAGACAGCAAAAGGGCCAGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp AGAGTTGGACATCTAGCGCTGTGGGCAGACTTGACTTaGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGACT +
Preference number: 3 (lower is better)
Translates to: RVGHLALWADLT*LPAFRFQEGLT
Trigger: AGTCAGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp CTCCAAGAACCTTCCAGAGTTGGACATCTAGCGCTGTaGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTC +
Preference number: 3 (lower is better)
Translates to: LQEPSRVGHLAL*ADLTWLPAFRF
Trigger: GAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp TTTGCTGTCTTGGTTGATGGGGGCTGGATTCAGGATTaGGCCCAGGGTGATGAGCAGAGGGAGGTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: FAVLVDGGWIQD*AQGDEQREVSG
Trigger: ACCTGAGACCTCCCTCTGCTCATCACCCTGGGCCCAATCCTGAATCCAGCCCCCATCAACCAAGACAGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGGAAGAACTGGGCATTTaGGGCACTGACATCCAGGAC +
Preference number: 3 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQEELGI*GTDIQD
Trigger: GTCCTGGATGTCAGTGCCCAAAATGCCCAGTTCTTC...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 72 bp TCACAGATGGGCAAGGAGTCTCTATCGTCATGCTGGTaGCCTGGAGGATCAGGTGGCAGAGGCCTGTCTTAC +
Preference number: 3 (lower is better)
Translates to: SQMGKESLSSCW*PGGSGGRGLSY
Trigger: GTAAGACAGGCCTCTGCCACCTGATCCTCCAGGTCACCAGCATGACGATAGAGACTCCTTGCCCATCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp CATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATaGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAG +
Preference number: 3 (lower is better)
Translates to: HFLHAESPGGPT*LSQLHQAGVRE
Trigger: CTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp GGACTTCTGGTCTGGCTCCTCCACTTATCTGGTGTGTaGCTTAAGGCAAGTTCCAGAGCCTGTGAGGGCCTA +
Preference number: 3 (lower is better)
Translates to: GLLVWLLHLSGV*LKASSRACEGL
Trigger: TAGGCCCTCACAGGCTCTGGAACTTGCCTTAAGCCACACACCAGATAAGTGGAGGAGCCAGACCAGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTTATTCCCTGCGTCTTaGGCCCACCATTGGTACTCA +
Preference number: 3 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQLFPAS*AHHWYS
Trigger: TGAGTACCAATGGTGGGCCAAAGACGCAGGGAATAA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGGTCTTTGGCCCACCATaGGTACTCACAGATCAACTA +
Preference number: 3 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQVFGPP*VLTDQL
Trigger: TAGTTGATCTGTGAGTACCAATGGTGGGCCAAAGAC...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 72 bp CTTTCCCATGAGAAGCAGGATGGTTTAGTGGTTGAGTaGGCAAGTTCTGGAGTCAGACAGCCTGGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: LSHEKQDGLVVE*ASSGVRQPGPR
Trigger: TCTGGGCCCAGGCTGTCTGACTCCAGAACTTGCTCACTCAACCACTAAACCATCCTGCTTCTCATGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCATAGTCAGTCCTCGATaGGAAGCCAGGGCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIIVSPR*EARASQ
Trigger: CTGGCTGGCCCTGGCTTCCAATCGAGGACTGACTAT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR GCA 72 bp AAACAACCCTGCTGGCACCTGTGGCCCAGTTTAGCATaGACAGCTCTTTGTGGTCAAAACCCTACCTTCCTA +
Preference number: 3 (lower is better)
Translates to: KQPCWHLWPSLA*TALCGQNPTFL
Trigger: TAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCACAGGTGCCAGCAGGGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp GTCTTACAACAAGAGCCTCCAAGAACCTTCCAGAGTTaGACATCTAGCGCTGTGGGCAGACTTGACTTGGCT +
Preference number: 3 (lower is better)
Translates to: VLQQEPPRTFQS*TSSAVGRLDLA
Trigger: AGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTCTTGGAGGCTCTTGTTGTAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp GGAAGAATCTCAAGCTTTGGGTCTGGACTTCTGGTCTaGCTCCTCCACTTATCTGGTGTGTGGCTTAAGGCA +
Preference number: 3 (lower is better)
Translates to: GRISSFGSGLLV*LLHLSGVWLKA
Trigger: TGCCTTAAGCCACACACCAGATAAGTGGAGGAGCCAGACCAGAAGTCCAGACCCAAAGCTTGAGATTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp GCAAGTTCTGGAGTCAGACAGCCTGGGCCCAGATCCTaGCTCTACGGTTTATTAGACATTTACTCTTGGGCA +
Preference number: 3 (lower is better)
Translates to: ASSGVRQPGPRS*LYGLLDIYSWA
Trigger: TGCCCAAGAGTAAATGTCTAATAAACCGTAGAGCCAGGATCTGGGCCCAGGCTGTCTGACTCCAGAACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp GCACCTGTGGCCCAGTTTAGCATGCACAGCTCTTTGTaGTCAAAACCCTACCTTCCTACCTACCCCATTTCT +
Preference number: 3 (lower is better)
Translates to: APVAQFSMHSSL*SKPYLPTYPIS
Trigger: AGAAATGGGGTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCACAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAAGGTTGGGAAGGGTGTaGGGCAGATCCCAGGATCCT +
Preference number: 3 (lower is better)
Translates to: WSLHLAFLKVRASKLEGERLGRV*GRSQDP
Trigger: AGGATCCTGGGATCTGCCCAACACCCTTCCCAACCT...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTTCCTTGCTATGAGATaGAAAAGGCAAAACTGTCTT +
Preference number: 3 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQFLAMR*KRQNCL
Trigger: AAGACAGTTTTGCCTTTTCAATCTCATAGCAAGGAA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR GCA 72 bp GCTGCTCTGATGGATTTAAGCCGCCTGAATCACCTGTaGTCACCCATTCTAGAGGAAGAATCTCAAGCTTTG +
Preference number: 3 (lower is better)
Translates to: AALMDLSRLNHL*SPILEEESQAL
Trigger: CAAAGCTTGAGATTCTTCCTCTAGAATGGGTGAGCACAGGTGATTCAGGCGGCTTAAATCCATCAGAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp ATGAATTCCAAACTCTTCTCCCTGAAACTCCTACAGTaGAAGCTCCTGGGGGAAGGAGGGATGGATGATAAG +
Preference number: 3 (lower is better)
Translates to: MNSKLFSLKLLQ*KLLGEGGMDDK
Trigger: CTTATCATCCATCCCTCCTTCCCCCAGGAGCTTCCACTGTAGGAGTTTCAGGGAGAAGAGTTTGGAATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCTGGATAGGCTGCCCTaGGTCACTTTCCCTAGATGC +
Preference number: 3 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLLDRLP*VTFPRC
Trigger: GCATCTAGGGAAAGTGACCAAGGGCAGCCTATCCAG...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 72 bp TCAAGAGCAGAGCTTCTAAGCTACCATAGACATTTGTaGTCCATCTGGCCGGCAGTGTTTTCTAGCCACAGA +
Preference number: 3 (lower is better)
Translates to: SRAELLSYHRHL*SIWPAVFSSHR
Trigger: TCTGTGGCTAGAAAACACTGCCGGCCAGATGGATCACAAATGTCTATGGTAGCTTAGAAGCTCTGCTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR TCA 72 bp TTTCCTTTGGCACTGTTGAGCCCACACTACAAAACATaGACAAGTCCCACAAAACCACACTATGCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: FPLALLSPHYKT*TSPTKPHYALC
Trigger: GCAGAGGGCATAGTGTGGTTTTGTGGGACTTGTTCATGTTTTGTAGTGTGGGCTCAACAGTGCCAAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTGCTCTCAAGTCCATTTaGGGTGACAGCTCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLALKSI*GDSSVS
Trigger: GGAGACAGAGCTGTCACCCAAAATGGACTTGAGAGC...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAGCCACTTCCATTGCTaGTATTGCCACTTAAGAGCT +
Preference number: 3 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNSHFHC*YCHLRA
Trigger: AGCTCTTAAGTGGCAATACAAGCAATGGAAGTGGCT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACCTGGCCATATCTCATaGCTTTTTAAAAGGCCACTC +
Preference number: 3 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEPGHIS*LFKRPL
Trigger: GAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR GCA 72 bp GAGCCTCATTTCGGGGAGAATTTTCTTAATGGTCCTTaGATTTGGCATTTCTTAAAGTCAGGGCTTCCAAAC +
Preference number: 3 (lower is better)
Translates to: EPHFGENFLNGP*IWHFLKSGLPN
Trigger: GTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCCGAAATGAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CCA 72 bp CTCTTATTCCTTTTTCTGATCTCAATGAGCAGCTCTTaGTCTACTGCCGACATAATACCGTTTCATAAACAT +
Preference number: 3 (lower is better)
Translates to: LLFLFLISMSSS*STADIIPFHKH
Trigger: ATGTTTATGAAACGGTATTATGTCGGCAGTAGACCAAGAGCTGCTCATTGAGATCAGAAAAAGGAATAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGGCCGGTCCGTGCCCTaGCGCAAGGCAGAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGGRSVP*RKAERP
Trigger: CGGCCTCTCTGCCTTGCGCCAGGGCACGGACCGGCC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACCGGGGGCCATGGTGTaGAGGGCCCCGCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAPGAMV*RAPLLE
Trigger: CTCCAGGAGCGGGGCCCTGCACACCATGGCCCCCGG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGCAGGGCCCCGCTCCTaGAGGAGGCTGCCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGAGPRS*RRLPLR
Trigger: CCGCAGAGGCAGCCTCCTCCAGGAGCGGGGCCCTGC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGGCCGGTCCGTGCCCTaGCGCAAGGCAGAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGGRSVP*RKAERP
Trigger: CGGCCTCTCTGCCTTGCGCCAGGGCACGGACCGGCC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTGGGCCGGTCCAGCCTaGGCGGCACTCGCACACCAC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGWAGPA*AALAHH
Trigger: GTGGTGTGCGAGTGCCGCCCAGGCTGGACCGGCCCA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACAGCGTTGCGGGGGATaGCCCGAGGAACCGCGCGGA +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAQRCGG*PEEPRG
Trigger: TCCGCGCGGTTCCTCGGGGCATCCCCCGCAACGCTG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACGGAGGCCCAGCCCGTaGCAGTCCACGCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQARRPSP*QSTLAA
Trigger: CGCTGCCAGCGTGGACTGCCACGGGCTGGGCCTCCG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGCCGGCGAAGCCTGGTaGGCAGCGGCAGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAAGEAW*AAAGGL
Trigger: GAGCCCACCTGCCGCTGCCCACCAGGCTTCGCCGGC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCCGCTTGCTGCGGGTaGGCTGGCAGCACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGAACCG*AGSTGA
Trigger: GGCCCCAGTGCTGCCAGCCCACCCGCAGCAAGCGGC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGGGCAGGCGACGGCTaGAGGCCCACTCAGGACGCT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAGAGDG*RPTQDA
Trigger: AGCGTCCTGAGTGGGCCTCCAGCCGTCGCCTGCCCC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGATGGGGGCTCCGAGTaGGGGGCTGGGCACACGTAC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRDGGSE*GAGHTY
Trigger: GTACGTGTGCCCAGCCCCCCACTCGGAGCCCCCATC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACGCACTGGGCCCCGTaGCGGCACTTGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGTHWAP*RHLWAT
Trigger: TGTGGCCCACAAGTGCCGCCACGGGGCCCAGTGCGT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCCTGGGGTCGGACCTTaGCGGAGGCCAGTTCCACGT +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGPGVGP*RRPVPR
Trigger: ACGTGGAACTGGCCTCCGCCAAGGTCCGACCCCAGG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAGCCGCACGTGGCCCTaGTACAGCTCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGSRTWP*YSSSAR
Trigger: CCTGGCACTGGAGCTGTACCAGGGCCACGTGCGGCT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGCTCCTGATCGCAGAGTaGGCCGGTCCAGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRLLIAE*AGPAWA
Trigger: CGCCCAGGCTGGACCGGCCCACTCTGCGATCAGGAG...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACACAGAAGGGTCCACTaGAGCCCTGGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAHRRVH*SPGGRC
Trigger: GCACCTGCCCCCAGGGCTTCAGTGGACCCTTCTGTG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGGTAGAGGGGGCTGTTaGTGCCCACTGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGGRGGC*CPLLAA
Trigger: AGCAGCCAGCAGTGGGCATCAACAGCCCCCTCTACC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGAGGAGGCTGCCTCTaGGGGGCAAGACGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAGGGCL*GARRVE
Trigger: CTCCACGCGTCTTGCCCCGCAGAGGCAGCCTCCTCC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR GCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGCGGAACACGCGCCCGTaGACGGTCTCCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRRNTRP*TVSSWF
Trigger: GAACCAGCTGGAGACCGTGCACGGGCGCGTGTTCCG...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAGGCGTGGACGGGGATaGACCTCAGCCGGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGRRGRG*TSAGCS
Trigger: GCTACAACCGGCTGAGGTGCATCCCCGTCCACGCCT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTACTGCAGCGGGCGATaGCAGGCTCCTTGTACCCCG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGYCSGR*QAPCTP
Trigger: CGGGGTACAAGGAGCCTGGCATCGCCCGCTGCAGTA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCGGCAGGTGGGCTCCTaGTGCACCACGATGCACTGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGRQVGS*CTTMHW
Trigger: CCAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACGGCAGGTGGGCTCCTaGTGCACCACGATGCACTGG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARQVGS*CTTMHW
Trigger: CCAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCGGTGGAGGTGGGGATaGCTCCAAGGTAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGRWRWG*LQGRGG
Trigger: GCCCCCTCTACCTTGGAGGCATCCCCACCTCCACCG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACGGTGGAGGTGGGGATaGCTCCAAGGTAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARWRWG*LQGRGG
Trigger: GCCCCCTCTACCTTGGAGGCATCCCCACCTCCACCG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAGCGGCACAGGCCGTaGTTGCACACGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRERHRP*LHTVQD
Trigger: GTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACGTATTTCCGCCGCTTaGTGCGGGTGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARISAA*CGWAGS
Trigger: GCTGCCAGCCCACCCGCAGCAAGCGGCGGAAATACG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCGGAGCAGGTACACTTaGTGGGGCAGGCGACGGCTG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVRSRYT*WGRRRL
Trigger: CAGCCGTCGCCTGCCCCACCAAGTGTACCTGCTCCG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACGGAGCAGGTACACTTaGTGGGGCAGGCGACGGCTG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARSRYT*WGRRRL
Trigger: CAGCCGTCGCCTGCCCCACCAAGTGTACCTGCTCCG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGGGCGGACAGCTCTCTaGGCACGGCTGTTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGGRTAL*ARLLGG
Trigger: ACCACCTAACAGCCGTGCCCAGAGAGCTGTCCGCCC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTACGCACTGGGCCCCGTaGCGGCACTTGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGTHWAP*RHLWAT
Trigger: TGTGGCCCACAAGTGCCGCCACGGGGCCCAGTGCGT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGTGGGCAGCGGCAGGTaGGCTCCTGCTGCACCACGA +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAVGSGR*APAAPR
Trigger: TCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCAC...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCACCCCCAGGGACTGTaGTGGGAGGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGHPQGL*WEGLEV
Trigger: GACTTCAAGGCCCTCCCACCACAGTCCCTGGGGGTG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACACAGAAGGGTCCACTaGAGCCCTGGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAHRRVH*SPGGRC
Trigger: GCACCTGCCCCCAGGGCTTCAGTGGACCCTTCTGTG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGGGTCCCGGGCCTCCTaGTCGCAGAGTGGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKGSRAS*SQSGPV
Trigger: GACCGGCCCACTCTGCGATCAGGAGGCCCGGGACCC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGGGTCCCGGGCCTCCTaGTCGCAGAGTGGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPGSRAS*SQSGPV
Trigger: GACCGGCCCACTCTGCGATCAGGAGGCCCGGGACCC...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCCTCGGTGGGGCTCTTaGGATGGCAGGCTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGPRWGS*DGRLSR
Trigger: CCTACTCAGCCTGCCATCTCAAGAGCCCCACCGAGG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAAGCTGGCAGCCTGGTaGCTCCTCCCAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAKLAAW*LLPGSQ
Trigger: CTGGCTTCCTGGGAGGAGTCACCAGGCTGCCAGCTT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAGTGTCTGGATGGACTaGAGAGGGGCGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGSVWMD*RGAKSP
Trigger: GGGGCTCTTCGCCCCTCTGCAGTCCATCCAGACACT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTTCCATACAGGTGCACTaGTCCGGGCAGCGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRASIQVH*SGQRGL
Trigger: GAGCCCGCGCTGCCCGGAGCAGTGCACCTGTATGGA...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATGGGCTCAGGGCTACTaGAGCGGGCGATGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAWAQGY*SGRCQA
Trigger: AGCCTGGCATCGCCCGCTGCAGTAGCCCTGAGCCCA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACCTGCTGCACCACGATaGACTGGGCCCCGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAPAAPR*TGPRSG
Trigger: GCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTCGGTGGAGGTGGGGATaGCTCCAAGGTAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRARWRWG*LQGRGG
Trigger: GCCCCCTCTACCTTGGAGGCATCCCCACCTCCACCG...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGCACAGGCCGTGCTTaGACACGGTGCAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRGTGRA*TRCRTC
Trigger: GCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGGCACAGGCCGTGCTTaGACACGGTGCAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVGTGRA*TRCRTC
Trigger: GCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCC...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAATTTCCGCCGCTTGCTaGGGGTGGGCTGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAISAAC*GWAGST
Trigger: AGTGCTGCCAGCCCACCCGCAGCAAGCGGCGGAAAT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGCGCATCGCTGGGAGTaGCCAGGTGCGGAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSAHRWE*PGAERP
Trigger: GGGGCGCTCCGCACCTGGGCACTCCCAGCGATGCGC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGCAGGGCCCCGCTCCTaGAGGAGGCTGCCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLAGPRS*RRLPLR
Trigger: CCGCAGAGGCAGCCTCCTCCAGGAGCGGGGCCCTGC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGGGGGCAGGCGACGGCTaGAGGCCCACTCAGGACGCT +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQGAGDG*RPTQDA
Trigger: AGCGTCCTGAGTGGGCCTCCAGCCGTCGCCTGCCCC...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACAGCGCGGGCTCAGCTaGCAGCTACTCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAQRGLS*QLLSSL
Trigger: CAACGAGGAGAGTAGCTGCCAGCTGAGCCCGCGCTG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCTCGGTCACATCCTTaGGCATGCCTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRARSHP*ACLWGG
Trigger: CCCTCCCCAGAGGCATGCCCAAGGATGTGACCGAGC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGGGCGGACAGCTCTCTaGGCACGGCTGTTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGGRTAL*ARLLGG
Trigger: ACCACCTAACAGCCGTGCCCAGAGAGCTGTCCGCCC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCACAGTGGAGTGGGTTaGTTCCCAGCGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGHSGVG*FPAPDG
Trigger: CCCATCTGGCGCTGGGAACCAACCCACTCCACTGTG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGCAGTCACAGTGGAGTaGGTTGGTTCCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGAVTVE*VGSQRQ
Trigger: CTGGCGCTGGGAACCAACCCACTCCACTGTGACTGC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTGCACCACGATGCACTaGGCCCCGTTCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRCTTMH*APFWHS
Trigger: CGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGCCGGCGAAGCCTGGTaGGCAGCGGCAGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLAGEAW*AAAGGL
Trigger: GAGCCCACCTGCCGCTGCCCACCAGGCTTCGCCGGC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACCTGGGGTCGGACCTTaGCGGAGGCCAGTTCCACGT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAPGVGP*RRPVPR
Trigger: ACGTGGAACTGGCCTCCGCCAAGGTCCGACCCCAGG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCCTGCAGGGAGATGTTaGCCTGGGGTCGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVPAGRC*PGVGPW
Trigger: CCAAGGTCCGACCCCAGGCCAACATCTCCCTGCAGG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCCTGCAGGGAGATGTTaGCCTGGGGTCGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGPAGRC*PGVGPW
Trigger: CCAAGGTCCGACCCCAGGCCAACATCTCCCTGCAGG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGAGGCAGAGAGGCCGGTaGAGGTGGGGATGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRRQRGR*RWGCLQ
Trigger: TTGGAGGCATCCCCACCTCCACCGGCCTCTCTGCCT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGGCCGGTCCGTGCCCTaGCGCAAGGCAGAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKGRSVP*RKAERP
Trigger: CGGCCTCTCTGCCTTGCGCCAGGGCACGGACCGGCC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTCATGGATGCATCCGTaGAAGCCGCCTAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGSWMHP*KPPRGR
Trigger: CCGGCCTCTAGGCGGCTTCCACGGATGCATCCATGA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGCCGCTTGCTGCGGGTaGGCTGGCAGCACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSAACCG*AGSTGA
Trigger: GGCCCCAGTGCTGCCAGCCCACCCGCAGCAAGCGGC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGGGACCGCAGCCCGTTaGAGGCGTGGACGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKGTAAR*RRGRGC
Trigger: GCATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGGGTCCCGGGCCTCCTaGTCGCAGAGTGGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQGSRAS*SQSGPV
Trigger: GACCGGCCCACTCTGCGATCAGGAGGCCCGGGACCC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACCCCACGACATTCCATaGTGGGCACCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAPHDIP*WAPWRL
Trigger: CAGCCTCCAAGGTGCCCATCATGGAATGTCGTGGGG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCCAGGGAGTTGGTGTaGACAGCTGAGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVARELV*TAEPWK
Trigger: CTTCCAGGGCTCAGCTGTTCACACCAACTCCCTGGC...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTAAGCTGGCAGCCTGGTaGCTCCTCCCAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAKLAAW*LLPGSQ
Trigger: CTGGCTTCCTGGGAGGAGTCACCAGGCTGCCAGCTT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGGGAGGAGGCTGCCTCTaGGGGGCAAGACGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRGGGCL*GARRVE
Trigger: CTCCACGCGTCTTGCCCCGCAGAGGCAGCCTCCTCC...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCCGGGGGCCATGGTGTaGAGGGCCCCGCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSPGAMV*RAPLLE
Trigger: CTCCAGGAGCGGGGCCCTGCACACCATGGCCCCCGG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCCACGATGTTATTGCTaGACGTGCAGGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGPRCYC*TCRAKG
Trigger: GCCCTTCGCCCTGCACGTGCAGCAATAACATCGTGG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGTGTCTGGATGGACTaGAGAGGGGCGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGSVWMD*RGAKSP
Trigger: GGGGCTCTTCGCCCCTCTGCAGTCCATCCAGACACT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGGAGGTGGCTTGGGATaGGGACCAGCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVGGGLG*GPASGW
Trigger: CCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCC...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGGAGGTGGCTTGGGATaGGGACCAGCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGGGGLG*GPASGW
Trigger: CCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCTCCTGCACGCTGGCTaGTCCATCGAAAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVLLHAG*SIESSL
Trigger: GAGGGAGCTTTCGATGGAGCAGCCAGCGTGCAGGAG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGTCAGCATCAGCTCCTaGACGCTGGCTGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVVSISS*TLAAPS
Trigger: CGATGGAGCAGCCAGCGTGCAGGAGCTGATGCTGAC...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCACTCAGGTGGCAGGTaGCTCCATGCTGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGHSGGR*LHADRG
Trigger: ACCCCTGTCAGCATGGAGGCACCTGCCACCTGAGTG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATCGCATGGGCTGGTCTaGAGTAGGACCATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVASHGLV*SRTMGG
Trigger: CCCACCCATGGTCCTACTGCAGACCAGCCCATGCGA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCTGGTACAGCTCCAGTaGCAGGGGGTCATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGLVQLQ*QGVIVS
Trigger: GGAGACAATGACCCCCTGGCACTGGAGCTGTACCAG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCGTGCTTGCACACGGTaGAGGACTTGCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVRACTR*RTCSLV
Trigger: CACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCACAGTGGAGTGGGTTaGTTCCCAGCGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGHSGVG*FPAPDG
Trigger: CCCATCTGGCGCTGGGAACCAACCCACTCCACTGTG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCCGTGGCGGCACTTGTaGGCCACACAGTCATCATTG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGPWRHL*ATQSSL
Trigger: CAATGATGACTGTGTGGCCCACAAGTGCCGCCACGG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAATTGTGTCCACGCACTaGGCCCCGTGGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAIVSTH*APWRHL
Trigger: CAAGTGCCGCCACGGGGCCCAGTGCGTGGACACAAT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACACTGGGCCCCGTTCTaGCACTCGTACTGGTCGCAT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAHWAPF*HSYWSH
Trigger: ATGCGACCAGTACGAGTGCCAGAACGGGGCCCAGTG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTTGCACCACGATGCACTaGGCCCCGTTCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRACTTMH*APFWHS
Trigger: CGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCA...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGTGGGCAGCGGCAGGTaGGCTCCTGCTGCACCACGA +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEVGSGR*APAAPR
Trigger: TCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCAC...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAGAGGCCGGTGGAGGTaGGGATGCCTCCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARGRWR*GCLQGR
Trigger: TCTACCTTGGAGGCATCCCCACCTCCACCGGCCTCT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTAGGCAGAGAGGCCGGTaGAGGTGGGGATGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRARQRGR*RWGCLQ
Trigger: TTGGAGGCATCCCCACCTCCACCGGCCTCTCTGCCT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCTCATGGATGCATCCGTaGAAGCCGCCTAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGSWMHP*KPPRGR
Trigger: CCGGCCTCTAGGCGGCTTCCACGGATGCATCCATGA...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCCATGGTGGCATCTGTaGCCGAGGCAGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRPWWHL*PRQGSR
Trigger: CCGGGACCCCTGCCTCGGCCACAGATGCCACCATGG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGAGCCATGCAGAGTGTaGACTGGCCAACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAEPCRV*TGQLSV
Trigger: GACGGACAGTTGGCCAGTTCACACTCTGCATGGCTC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAGCCATGCAGAGTGTaGACTGGCCAACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRREPCRV*TGQLSV
Trigger: GACGGACAGTTGGCCAGTTCACACTCTGCATGGCTC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGAGGTTCTGCAGGTCCTaGAACGTGTTCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVRFCRS*NVFTRR
Trigger: CCTGCGGGTGAACACGTTTCAGGACCTGCAGAACCT...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTCAGTCGCAGGTCGGTaGCATATTCAGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRSVAGR*HIQGGG
Trigger: GCCACCTCCCTGAATATGTCACCGACCTGCGACTGA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTCAGTCGCAGGTCGGTaGCATATTCAGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVSVAGR*HIQGGG
Trigger: GCCACCTCCCTGAATATGTCACCGACCTGCGACTGA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGGGACCGCAGCCCGTTaGAGGCGTGGACGGGGATGC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQGTAAR*RRGRGC
Trigger: GCATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTGGGACCGCAGCCCGTTaGAGGCGTGGACGGGGATGC +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCGTAAR*RRGRGC
Trigger: GCATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCC...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCACAGTCATCTGGGTTaGTCTCACACCGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVHSHLG*SHTAAP
Trigger: AGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCCTGCAGCTCGTTGTTaGTGCGCACCTCATGGATGC +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVPAARC*CAPHGC
Trigger: GCATCCATGAGGTGCGCATCAACAACGAGCTGCAGG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGCCCATGGTGACACTTaGAGGCTGAGCAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAAHGDT*RLSRHW
Trigger: CCAATGCCTGCTCAGCCTTCAAGTGTCACCATGGGC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCCACGATGTTATTGCTaGACGTGCAGGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGPRCYC*TCRAKG
Trigger: GCCCTTCGCCCTGCACGTGCAGCAATAACATCGTGG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGTATTTCGACGATaGCCTCCGGCAAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAGVFRR*PPASWQ
Trigger: CTGCCAACTTGCCGGAGGGCATCGTCGAAATACGCC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCTGGGTGAAGGCTCCTaGAGGGATGGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGLGEGS*RDGFDG
Trigger: TCCATCAAAGCCATCCCTGCAGGAGCCTTCACCCAG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTAGTGTCTGGATGGACTaGAGAGGGGCGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRASVWMD*RGAKSP
Trigger: GGGGCTCTTCGCCCCTCTGCAGTCCATCCAGACACT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACGCGGAGCCCCTTGTTaGTGCATCGCACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQARGAPC*CIAPLS
Trigger: AGACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGACAGCCACCGAAGACTaGAGTCACAGTGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGTATED*SHSGVG
Trigger: ACCCACTCCACTGTGACTGCAGTCTTCGGTGGCTGT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTGGGCTCAGGGCTACTaGAGCGGGCGATGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQWAQGY*SGRCQA
Trigger: AGCCTGGCATCGCCCGCTGCAGTAGCCCTGAGCCCA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGTGGGCTCAGGGCTACTaGAGCGGGCGATGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRWAQGY*SGRCQA
Trigger: AGCCTGGCATCGCCCGCTGCAGTAGCCCTGAGCCCA...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACACTCAGGTGGCAGGTaGCTCCATGCTGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAHSGGR*LHADRG
Trigger: ACCCCTGTCAGCATGGAGGCACCTGCCACCTGAGTG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCCTGCTGCACCACGATaGACTGGGCCCCGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQPAAPR*TGPRSG
Trigger: GCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCTTGTCAGTGGCCACCTaGAGGGAGATGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGLSVAT*REMLAW
Trigger: CCAGGCCAACATCTCCCTGCAGGTGGCCACTGACAA...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTGCGCACCTCATGGATaGATCCGTGGAAGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVCAPHG*IRGSRL
Trigger: TAGGCGGCTTCCACGGATGCATCCATGAGGTGCGCA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTTCTCTTGTTGGCAGTaGTCGCCGCTAAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVFSCWQ*SPLKPG
Trigger: GCCCGGCTTTAGCGGCGAGCACTGCCAACAAGAGAA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGAGGAGAGAGGGCCAGTaGATGGGTCCTGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVRREGQ*MGPEET
Trigger: TGTCTCCTCAGGACCCATGCACTGGCCCTCTCTCCT...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTTGAGCGGCCTCTTCTaGCCACGTACATTGCCACAC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGLSGLF*PRTLPH
Trigger: GTGTGGCAATGTACGTGGGCAGAAGAGGCCGCTCAA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGCGGAGGCCCAGCCCGTaGCAGTCCACGCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPERRPSP*QSTLAA
Trigger: CGCTGCCAGCGTGGACTGCCACGGGCTGGGCCTCCG...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACGCAGTACAGGTGGTTaGAGTGGAGGCGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARSTGG*SGGAEF
Trigger: GAACTCTGCGCCTCCACTCCAACCACCTGTACTGCG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACAGTCGCAGTACAGGTaGTTGGAGTGGAGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAQSQYR*LEWRRR
Trigger: TCTGCGCCTCCACTCCAACCACCTGTACTGCGACTG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGATGGGGGCTCCGAGTaGGGGGCTGGGCACACGTAC +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLDGGSE*GAGHTY
Trigger: GTACGTGTGCCCAGCCCCCCACTCGGAGCCCCCATC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGATGGGGGCTCCGAGTaGGGGGCTGGGCACACGTAC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLDGGSE*GAGHTY
Trigger: GTACGTGTGCCCAGCCCCCCACTCGGAGCCCCCATC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGGCAGGAGATGGAGTTaGCATTGCAGGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGGRRWS*HCRMGA
Trigger: AGCCCCCATCCTGCAATGCCAACTCCATCTCCTGCC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTGCCCTCCGGCAAGTTaGCAGGAATCTCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGCPPAS*QESPSS
Trigger: GCTTGATGGAGATTCCTGCCAACTTGCCGGAGGGCA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAGTGGAGTGTCTGGATaGACTGCAGAGGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGSGVSG*TAEGRR
Trigger: TCTTCGCCCCTCTGCAGTCCATCCAGACACTCCACT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCTAAGTGGAGTGTCTaGATGGACTGCAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVAKWSV*MDCRGA
Trigger: CGCCCCTCTGCAGTCCATCCAGACACTCCACTTAGC...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCTAAGTGGAGTGTCTaGATGGACTGCAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRAKWSV*MDCRGA
Trigger: CGCCCCTCTGCAGTCCATCCAGACACTCCACTTAGC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACCCCGCTTGTCTCGATaGGGTTGTCCTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAPRLSR*GCPGGS
Trigger: ACTACCTCCAGGACAACCCCATCGAGACAAGCGGGG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATTCAGGGAGGTGGCTTaGGATGCGGACCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAFREVA*DADQLL
Trigger: CAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATCAGCTCCTGCACGCTaGCTGCTCCATCGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVASAPAR*LLHRKL
Trigger: GAGCTTTCGATGGAGCAGCCAGCGTGCAGGAGCTGA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGGCACGGCTGTTAGGTaGTTTCCTTCCAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGGTAVR*FPSRYS
Trigger: GCTGTACCTGGAAGGAAACCACCTAACAGCCGTGCC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAGACTGCAGTCACAGTaGAGTGGGTTGGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGRLQSQ*SGLVPS
Trigger: GCTGGGAACCAACCCACTCCACTGTGACTGCAGTCT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGATGTCCACTGGCCCTaGGCAGCAAAACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGDVHWP*AAKPEY
Trigger: GTACTCTGGTTTTGCTGCCCAGGGCCAGTGGACATC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCCAGGGGGATGCACTTaGCCTCATGCTGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGPGGCT*PHADRG
Trigger: ACCTCTGTCAGCATGAGGCCAAGTGCATCCCCCTGG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGCCAGGGGGATGCACTTaGCCTCATGCTGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRPGGCT*PHADRG
Trigger: ACCTCTGTCAGCATGAGGCCAAGTGCATCCCCCTGG...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACCGTGGCGGCACTTGTaGGCCACACAGTCATCATTG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAPWRHL*ATQSSL
Trigger: CAATGATGACTGTGTGGCCCACAAGTGCCGCCACGG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCACGCACTGGGCCCCGTaGCGGCACTTGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSTHWAP*RHLWAT
Trigger: TGTGGCCCACAAGTGCCGCCACGGGGCCCAGTGCGT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATTCTGGCACTCGTACTaGTCGCATGGGCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAFWHSY*SHGLVC
Trigger: GCAGACCAGCCCATGCGACCAGTACGAGTGCCAGAA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTTCTGGCACTCGTACTaGTCGCATGGGCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVFWHSY*SHGLVC
Trigger: GCAGACCAGCCCATGCGACCAGTACGAGTGCCAGAA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGTGGGCAGCGGCAGGTaGGCTCCTGCTGCACCACGA +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKVGSGR*APAAPR
Trigger: TCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCAC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGCCGGCGAAGCCTGGTaGGCAGCGGCAGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEAGEAW*AAAGGL
Trigger: GAGCCCACCTGCCGCTGCCCACCAGGCTTCGCCGGC...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTGGGCCGGTCCAGCCTaGGCGGCACTCGCACACCAC +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSWAGPA*AALAHH
Trigger: GTGGTGTGCGAGTGCCGCCCAGGCTGGACCGGCCCA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGCCACACATTTTCCATaGTGGCATCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGATHFP*WHLWPR
Trigger: CCTCGGCCACAGATGCCACCATGGAAAATGTGTGGC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCCAACTCCATCAAGCTaGAGTCCGAGAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGPTPSS*SPRGGR
Trigger: CCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCTGGGCAGACTTGACTTaGCTCCCAGCCTTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGWADLT*LPAFRF
Trigger: GAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCA...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTGGGCAGACTTGACTTaGCTCCCAGCCTTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVWADLT*LPAFRF
Trigger: GAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTGGAGTCAGACAGCCTaGGCCCAGATCCTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRWSQTA*AQILAL
Trigger: TAGAGCCAGGATCTGGGCCCAGGCTGTCTGACTCCA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGGCTGGATTCAGGATTaGGCCCAGGGTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGGWIQD*AQGDEQ
Trigger: CTGCTCATCACCCTGGGCCCAATCCTGAATCCAGCC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACCCGCTGCGCATCGCTaGGAGTGCCCAGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQPAAHR*ECPGAE
Trigger: CTCCGCACCTGGGCACTCCCAGCGATGCGCAGCGGG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGCACATCCGCCACGTTaGAGCCCCTCAAATGCACAG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAAHPPR*SPSNAQ
Trigger: CTGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCTGCAGGGATGGCTTTaGTGGAGTTCTGTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGLQGWL*WSSVLG
Trigger: GCCTAGAACAGAACTCCATCAAAGCCATCCCTGCAG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTTTCTTGTACTGGGTaGAGGCTCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRVSCTG*RLLQGW
Trigger: CCATCCCTGCAGGAGCCTTCACCCAGTACAAGAAAC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGGTTGGGCAACTTCTTaGAGATGCCAGTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGGWATS*RCQWPP
Trigger: TGGAGGCCACTGGCATCTTCAAGAAGTTGCCCAACC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCGTTGCCATCACAGGTaGAGTCCTGGATGGCCACAT +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGRCHHR*SPGWPH
Trigger: ATGTGGCCATCCAGGACTTCACCTGTGATGGCAACG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCGTTGCCATCACAGGTaGAGTCCTGGATGGCCACAT +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVRCHHR*SPGWPH
Trigger: ATGTGGCCATCCAGGACTTCACCTGTGATGGCAACG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATCTGGATGCAGGTGTTaGTGGGCACAGTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVASGCRC*WAQCSP
Trigger: AGGACTGCACTGTGCCCATCAACACCTGCATCCAGA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCACAGTCATCTGGGTTaGTCTCACACCGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGHSHLG*SHTAAP
Trigger: AGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTCACTTGGCCTCATGCTaGCAGAGGTTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAHLASC*QRFSSG
Trigger: GCCTGAGCTGAACCTCTGTCAGCATGAGGCCAAGTG...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGGACTTGCAGCCTGGTaGCACCCCCAGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPGLAAW*HPQGLW
Trigger: CCACAGTCCCTGGGGGTGTCACCAGGCTGCAAGTCC...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTGACACTTGAAGGCTaGGCAGGCATTGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRVTLEG*AGIGRV
Trigger: GACTCTGCCAATGCCTGCTCAGCCTTCAAGTGTCAC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCCCATGGTGACACTTaGAGGCTGAGCAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGAHGDT*RLSRHW
Trigger: CCAATGCCTGCTCAGCCTTCAAGTGTCACCATGGGC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCGCTGTGGGCAGACTTaGCTTGGCTCCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQRCGQT*LGSQPS
Trigger: GGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGTTGGTGTGAACAGCTaGGCCCTGGAAGATATGTGG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGVGVNS*ALEDMW
Trigger: CCACATATCTTCCAGGGCTCAGCTGTTCACACCAAC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAGATGGAGTTGGCATTaGAGGATGGGGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARWSWH*RMGAPS
Trigger: ACTCGGAGCCCCCATCCTGCAATGCCAACTCCATCT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCTGTTATTGCTGCACGTaGAGGGCGAAGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGCYCCT*RAKGRR
Trigger: TCTCCTGCCCTTCGCCCTGCACGTGCAGCAATAACA...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATGTTATTGCTGCACGTaGAGGGCGAAGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVACYCCT*RAKGRR
Trigger: TCTCCTGCCCTTCGCCCTGCACGTGCAGCAATAACA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTACTGCAGCGGGCGATaGCAGGCTCCTTGTACCCCG +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQYCSGR*QAPCTP
Trigger: CGGGGTACAAGGAGCCTGGCATCGCCCGCTGCAGTA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGATGTCCCGTTATTCTTaGACGGGCTGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVMSRYS*TGWRGR
Trigger: CCTGCCTCTCCAGCCCGTGCAAGAATAACGGGACAT...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCCACAGGGTCCTGGGTaGATGTCCCGTTATTCTTGC +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGPQGPG*MSRYSC
Trigger: GCAAGAATAACGGGACATGCACCCAGGACCCTGTGG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGCTGTTGATGCCCACTaGTGGCTGCTTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAAVDAH*WLLLEL
Trigger: AAGCTCCAGAAGCAGCCAGCAGTGGGCATCAACAGC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGCTAGAGGCCGGTCCGTaGCCTGGCGCAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLLEAGP*PGARQR
Trigger: TCTCTGCCTTGCGCCAGGGCACGGACCGGCCTCTAG...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATGCGCACCTCATGGATaGATCCGTGGAAGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQACAPHG*IRGSRL
Trigger: TAGGCGGCTTCCACGGATGCATCCATGAGGTGCGCA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCGTATTTCCGCCGCTTaGTGCGGGTGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLRISAA*CGWAGS
Trigger: GCTGCCAGCCCACCCGCAGCAAGCGGCGGAAATACG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCGTATTTCCGCCGCTTaGTGCGGGTGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPRISAA*CGWAGS
Trigger: GCTGCCAGCCCACCCGCAGCAAGCGGCGGAAATACG...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGCCACACTATGCCCTCTaGTTCCCCATCATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRPHYAL*FPIMWG
Trigger: TCCCCACATGATGGGGAAGCAGAGGGCATAGTGTGG...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTACAGGTGGTTGGAGTaGAGGCGCAGAGTTCGGATC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRYRWLE*RRRVRI
Trigger: GATCCGAACTCTGCGCCTCCACTCCAACCACCTGTA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACGCAGTACAGGTGGTTaGAGTGGAGGCGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQARSTGG*SGGAEF
Trigger: GAACTCTGCGCCTCCACTCCAACCACCTGTACTGCG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCAGTCGCAGTACAGGTaGTTGGAGTGGAGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGQSQYR*LEWRRR
Trigger: TCTGCGCCTCCACTCCAACCACCTGTACTGCGACTG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGAGATGGAGTTaGCATTGCAGGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGGRRWS*HCRMGA
Trigger: AGCCCCCATCCTGCAATGCCAACTCCATCTCCTGCC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGGCAGGAGATGGAGTTaGCATTGCAGGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAGRRWS*HCRMGA
Trigger: AGCCCCCATCCTGCAATGCCAACTCCATCTCCTGCC...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGTGGAGTGTCTGGATaGACTGCAGAGGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGSGVSG*TAEGRR
Trigger: TCTTCGCCCCTCTGCAGTCCATCCAGACACTCCACT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACGGCTGTTAGGTaGTTTCCTTCCAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAGTAVR*FPSRYS
Trigger: GCTGTACCTGGAAGGAAACCACCTAACAGCCGTGCC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAACTGGAAGCGGTGGGTTaGGGTGGTGAGCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQELEAVG*GGEQEP
Trigger: AGGCTCCTGCTCACCACCCCAACCCACCGCTTCCAG...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGATGTCCACTGGCCCTaGGCAGCAAAACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRDVHWP*AAKPEY
Trigger: GTACTCTGGTTTTGCTGCCCAGGGCCAGTGGACATC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGTCCTCACAGTCATCTaGGTTGATCTCACACCGCTG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGVLTVI*VDLTPL
Trigger: CAGCGGTGTGAGATCAACCCAGATGACTGTGAGGAC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCCGTGGCGGCACTTGTaGGCCACACAGTCATCATTG +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGPWRHL*ATQSSL
Trigger: CAATGATGACTGTGTGGCCCACAAGTGCCGCCACGG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGATTGTGTCCACGCACTaGGCCCCGTGGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQIVSTH*APWRHL
Trigger: CAAGTGCCGCCACGGGGCCCAGTGCGTGGACACAAT...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAACCTGCAGGGAGATGTTaGCCTGGGGTCGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEPAGRC*PGVGPW
Trigger: CCAAGGTCCGACCCCAGGCCAACATCTCCCTGCAGG...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACGTTGTCCTTGTCAGTaGCCACCTGCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARCPCQ*PPAGRC
Trigger: ACATCTCCCTGCAGGTGGCCACTGACAAGGACAACG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAGCCGCACGTGGCCCTaGTACAGCTCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLSRTWP*YSSSAR
Trigger: CCTGGCACTGGAGCTGTACCAGGGCCACGTGCGGCT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGAGGCAGAGAGGCCGGTaGAGGTGGGGATGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRRQRGR*RWGCLQ
Trigger: TTGGAGGCATCCCCACCTCCACCGGCCTCTCTGCCT...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATTGATGCGCACCTCATaGATGCATCCGTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVALMRTS*MHPWKP
Trigger: CGGCTTCCACGGATGCATCCATGAGGTGCGCATCAA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCTCCTGATCGCAGAGTaGGCCGGTCCAGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSLLIAE*AGPAWA
Trigger: CGCCCAGGCTGGACCGGCCCACTCTGCGATCAGGAG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACCATGGTGGCATCTGTaGCCGAGGCAGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQPWWHL*PRQGSR
Trigger: CCGGGACCCCTGCCTCGGCCACAGATGCCACCATGG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCACGGATTCTCTTGTTaGCAGTGCTCGCCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGHGFSC*QCSPLK
Trigger: CTTTAGCGGCGAGCACTGCCAACAAGAGAATCCGTG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACCAGGGGGTCCCACATaGCTGTCCCAACTCCATCAA +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAPGGPT*LSQLHQ
Trigger: TTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCCTGGGCCCAGATCCTaGCTCTACGGTTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGPGPRS*LYGLLD
Trigger: GTCTAATAAACCGTAGAGCCAGGATCTGGGCCCAGG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAATGGGGCAATGGAGGTaGGGATGGGGAAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAMGQWR*GWGNGG
Trigger: ACCTCCATTTCCCCATCCCCACCTCCATTGCCCCAT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCTGGATTCAGGATTaGGCCCAGGGTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAGWIQD*AQGDEQ
Trigger: CTGCTCATCACCCTGGGCCCAATCCTGAATCCAGCC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATTGGTTGATGGGGGCTaGATTCAGGATTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVALVDGG*IQDWAQ
Trigger: CTGGGCCCAATCCTGAATCCAGCCCCCATCAACCAA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACGCCGGGTTGGGGACCTaGGGCGAGCGCAATGGGGCG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYAGLGT*GERNGA
Trigger: CGCCCCATTGCGCTCGCCCCAGGTCCCCAACCCGGC...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAACAGGACCAGCGATGTaGGTGATTTCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQATGPAM*VISGPG
Trigger: TCCAGGGCCTGAAATCACTCACATCGCTGGTCCTGT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGGTTGGGCAACTTCTTaGAGATGCCAGTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAGWATS*RCQWPP
Trigger: TGGAGGCCACTGGCATCTTCAAGAAGTTGCCCAACC...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGGATGGGAATCTCCTTaGGGAAAAATGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGGWESP*GKMASG
Trigger: GCCAGAAGCCATTTTTCCTCAAGGAGATTCCCATCC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACGTTGCCATCACAGGTaGAGTCCTGGATGGCCACAT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQARCHHR*SPGWPH
Trigger: ATGTGGCCATCCAGGACTTCACCTGTGATGGCAACG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTGCATGTGTAGCCATTaGTTGTGTCCACGCACTGGG +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRCMCSH*LCPRTG
Trigger: CCCAGTGCGTGGACACAATCAATGGCTACACATGCA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCTGCATGTGTAGCCATTaGTTGTGTCCACGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGCMCSH*LCPRTG
Trigger: CCCAGTGCGTGGACACAATCAATGGCTACACATGCA...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCACAGAAGGGTCCACTaGAGCCCTGGGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCHRRVH*SPGGRC
Trigger: GCACCTGCCCCCAGGGCTTCAGTGGACCCTTCTGTG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGGACTTGCAGCCTGGTaGCACCCCCAGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSGLAAW*HPQGLW
Trigger: CCACAGTCCCTGGGGGTGTCACCAGGCTGCAAGTCC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCCTGAGGAGACACCATaGTATTCTCTTCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGPEETP*YSLPSP
Trigger: AGGCGAGGGAAGAGAATATCATGGTGTCTCCTCAGG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGATATGTGGCTAACCTaGTGGGGTGGAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRADMWLT*WGGRGQ
Trigger: TTGCCCCCTTCCACCCCATCAGGTTAGCCACATATC...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCCTCGGTGGGGCTCTTaGGATGGCAGGCTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKPRWGS*DGRLSR
Trigger: CCTACTCAGCCTGCCATCTCAAGAGCCCCACCGAGG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCGCAGTCGCTCTAGCTaGTTCAGGTCCTGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRRSRSS*FRSWKA
Trigger: CGCCTTCCAGGACCTGAAGCAGCTAGAGCGACTGCG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAAGATGGAGTTGGCATTaGAGGATGGGGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQARWSWH*RMGAPS
Trigger: ACTCGGAGCCCCCATCCTGCAATGCCAACTCCATCT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAGTCCACGATGTTATTaGTGCACGTGCAGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVASPRCY*CTCRAK
Trigger: CTTCGCCCTGCACGTGCAGCAATAACATCGTGGACT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGAGCAGTCCACAATCGTaGCCTCACAGCGACACTTCT +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVSSPQS*PHSDTS
Trigger: AGAAGTGTCGCTGTGAGGGCACGATTGTGGACTGCT...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGAGGTGGCTTGGGATaGGGACCAGCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEGGGLG*GPASGW
Trigger: CCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCC...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCTCCTGCACGCTGGCTaGTCCATCGAAAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLLHAG*SIESSL
Trigger: GAGGGAGCTTTCGATGGAGCAGCCAGCGTGCAGGAG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATCCATACAGGTGCACTaGTCCGGGCAGCGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQSIQVH*SGQRGL
Trigger: GAGCCCGCGCTGCCCGGAGCAGTGCACCTGTATGGA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGCTGTCTCCATACAGGTaGACTGCTCCGGGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLLSPYR*TAPGSA
Trigger: CGCGCTGCCCGGAGCAGTGCACCTGTATGGAGACAG...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTGTCTCCATACAGGTaGACTGCTCCGGGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLSPYR*TAPGSA
Trigger: CGCGCTGCCCGGAGCAGTGCACCTGTATGGAGACAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCTGTCTCCATACAGGTaGACTGCTCCGGGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLLSPYR*TAPGSA
Trigger: CGCGCTGCCCGGAGCAGTGCACCTGTATGGAGACAG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGAGGCGTGGACGGGGATaGACCTCAGCCGGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKRRGRG*TSAGCS
Trigger: GCTACAACCGGCTGAGGTGCATCCCCGTCCACGCCT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGAGGCGTGGACGGGGATaGACCTCAGCCGGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLRRGRG*TSAGCS
Trigger: GCTACAACCGGCTGAGGTGCATCCCCGTCCACGCCT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCGCTGGAAATGTCATTaGCATGGAGGGTTAGCACTC +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGRWKCH*HGGLAL
Trigger: GAGTGCTAACCCTCCATGGCAATGACATTTCCAGCG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCTAGAGGCCGGTCCGTaGCCTGGCGCAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCLEAGP*PGARQR
Trigger: TCTCTGCCTTGCGCCAGGGCACGGACCGGCCTCTAG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTAGGGCCTTGAAGTCCTaGAGCTCGTTGTTGATGCGC +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGRALKS*SSLLMR
Trigger: GCGCATCAACAACGAGCTGCAGGACTTCAAGGCCCT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCGTGCTTGCACACGGTaGAGGACTTGCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQRACTR*RTCSLV
Trigger: CACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGAGCGGCACAGGCCGTaGTTGCACACGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSERHRP*LHTVQD
Trigger: GTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTAGCCCTCGGCACACTTaGACATGTATGAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGSPRHT*TCMRSQ
Trigger: CTGGGACCTCATACATGTGCAAGTGTGCCGAGGGCT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACTTTTCCGGCAGGGCTaGTCTGATGGATTTAAGCCG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVALFRQG*SDGFKP
Trigger: CGGCTTAAATCCATCAGAGCAGCCCTGCCGGAAAAG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCTCTGCTCCTCAGTGTaGTTCCCATACTCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVLCSSV*FPYSCH
Trigger: GTGGCAAGAGTATGGGAAGCACACTGAGGAGCAGAG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCTCTGCTCCTCAGTGTaGTTCCCATACTCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGLCSSV*FPYSCH
Trigger: GTGGCAAGAGTATGGGAAGCACACTGAGGAGCAGAG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTTTGAGCGGCCTCTTCTaGCCACGTACATTGCCACAC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRALSGLF*PRTLPH
Trigger: GTGTGGCAATGTACGTGGGCAGAAGAGGCCGCTCAA...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCCACACTATGCCCTCTaGTTCCCCATCATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGPHYAL*FPIMWG
Trigger: TCCCCACATGATGGGGAAGCAGAGGGCATAGTGTGG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAGCAGGTACACTTGGTaGGGCAGGCGACGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPSRYTW*GRRRLE
Trigger: CTCCAGCCGTCGCCTGCCCCACCAAGTGTACCTGCT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCGTGGCAGTCCACGCTaGCAGCGGAGCAGGTACACT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLRGSPR*QRSRYT
Trigger: AGTGTACCTGCTCCGCTGCCAGCGTGGACTGCCACG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAATGCAGAGTGTGAACTaGCCAACTGTCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAMQSVN*PTVRRC
Trigger: ACAGCGACGGACAGTTGGCCAGTTCACACTCTGCAT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTTGCCCTCCGGCAAGTTaGCAGGAATCTCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGCPPAS*QESPSS
Trigger: GCTTGATGGAGATTCCTGCCAACTTGCCGGAGGGCA...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATGCCCTCCGGCAAGTTaGCAGGAATCTCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQACPPAS*QESPSS
Trigger: GCTTGATGGAGATTCCTGCCAACTTGCCGGAGGGCA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGCCAGCCACTTCAAGTaGCAGTCGCACACAAATGGG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAASHFK*QSHTNG
Trigger: CCCATTTGTGTGCGACTGCCACTTGAAGTGGCTGGC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGCCAGCCACTTCAAGTaGCAGTCGCACACAAATGGG +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAASHFK*QSHTNG
Trigger: CCCATTTGTGTGCGACTGCCACTTGAAGTGGCTGGC...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGATGCGGACCAGCTTCTaGTTGGAGCAGTCCACAATC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRMRTSF*LEQSTI
Trigger: GATTGTGGACTGCTCCAACCAGAAGCTGGTCCGCAT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAACATATTCAGGGAGGTaGCTTGGGATGCGGACCAGC +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQATYSGR*LGMRTS
Trigger: GCTGGTCCGCATCCCAAGCCACCTCCCTGAATATGT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAGGAAAAATGGCTTCTaGCACCTAGGGTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGRKNGF*HLGFPL
Trigger: CAGTGGGAACCCTAGGTGCCAGAAGCCATTTTTCCT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCAGCGCGGGCTCAGCTaGCAGCTACTCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPQRGLS*QLLSSL
Trigger: CAACGAGGAGAGTAGCTGCCAGCTGAGCCCGCGCTG...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGCTCGGTCACATCCTTaGGCATGCCTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPARSHP*ACLWGG
Trigger: CCCTCCCCAGAGGCATGCCCAAGGATGTGACCGAGC...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAGCCCGTTGAAGGCGTaGACGGGGATGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPSPLKA*TGMHLS
Trigger: GCTGAGGTGCATCCCCGTCCACGCCTTCAACGGGCT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGAGCCCGTTGAAGGCGTaGACGGGGATGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKSPLKA*TGMHLS
Trigger: GCTGAGGTGCATCCCCGTCCACGCCTTCAACGGGCT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTTCCCAGCGCCAGATaGGAAAGAGATGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGVPSAR*ERDVRS
Trigger: CGACCTCACATCTCTTTCCCATCTGGCGCTGGGAAC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGGCAGTCACAGTGGAGTaGGTTGGTTCCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRAVTVE*VGSQRQ
Trigger: CTGGCGCTGGGAACCAACCCACTCCACTGTGACTGC...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTTCCCGTCCACGCAGGTaGCATTGTTTTCGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGSRPRR*HCFRSR
Trigger: ACGACTGCGAAAACAATGCCACCTGCGTGGACGGGA...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAGCTCAGGCACACAGTaGTCAATCACCTCGTCGCAT +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVASSGTQ*SITSSH
Trigger: ATGCGACGAGGTGATTGACCACTGTGTGCCTGAGCT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCATTGTGTCCACGCACTaGGCCCCGTGGCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSIVSTH*APWRHL
Trigger: CAAGTGCCGCCACGGGGCCCAGTGCGTGGACACAAT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAGGGAGATGTTGGCCTaGGGTCGGACCTTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSREMLA*GRTLAE
Trigger: CTCCGCCAAGGTCCGACCCCAGGCCAACATCTCCCT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCGTTGTCCTTGTCAGTaGCCACCTGCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGRCPCQ*PPAGRC
Trigger: ACATCTCCCTGCAGGTGGCCACTGACAAGGACAACG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGACTGTACACTGTGGTTaGAGGGGAACTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRTVHCG*RGTQAV
Trigger: GACAGCCTGAGTTCCCCTCCAACCACAGTGTACAGT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGACTAGGTTCAGGGTCTaGTTTAGCGTCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRTRFRV*FSVTSS
Trigger: GGAGCTGGTGACGCTAAACCAGACCCTGAACCTAGT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTGGGCCGGTCCAGCCTaGGCGGCACTCGCACACCAC +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYWAGPA*AALAHH
Trigger: GTGGTGTGCGAGTGCCGCCCAGGCTGGACCGGCCCA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCCACACATTTTCCATaGTGGCATCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGATHFP*WHLWPR
Trigger: CCTCGGCCACAGATGCCACCATGGAAAATGTGTGGC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTAGTCCCCTTCAGGAATaGAGGCAGAGGCTGGATAGG +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRASPLQE*RQRLDR
Trigger: CCTATCCAGCCTCTGCCTCCATTCCTGAAGGGGACT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATACAGTGGAAGCTCCTaGGGGAAGGAGGGATGGATG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAYSGSS*GKEGWM
Trigger: CATCCATCCCTCCTTCCCCCAGGAGCTTCCACTGTA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTATGGGGCAATGGAGGTaGGGATGGGGAAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGMGQWR*GWGNGG
Trigger: ACCTCCATTTCCCCATCCCCACCTCCATTGCCCCAT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGGTTCTTCACATCGGTaGTGCCGCGGAACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSGSSHR*CRGTPS
Trigger: GGAAGGCGTTCCGCGGCATCACCGATGTGAAGAACC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAAGGTTCTGCAGGTCCTaGAACGTGTTCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQERFCRS*NVFTRR
Trigger: CCTGCGGGTGAACACGTTTCAGGACCTGCAGAACCT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACCAGCTCCACACTGTaGAACTGCCCATCATTCACT +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGTSSTL*NCPSFT
Trigger: AGTGAATGATGGGCAGTTTCACAGTGTGGAGCTGGT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGGTAGAGGGGGCTGTTaGTGCCCACTGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQGRGGC*CPLLAA
Trigger: AGCAGCCAGCAGTGGGCATCAACAGCCCCCTCTACC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAACCTGCAGCTCGTTGTTaGTGCGCACCTCATGGATGC +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEPAARC*CAPHGC
Trigger: GCATCCATGAGGTGCGCATCAACAACGAGCTGCAGG...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCCCACGACATTCCATaGTGGGCACCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSPHDIP*WAPWRL
Trigger: CAGCCTCCAAGGTGCCCATCATGGAATGTCGTGGGG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCCTGAGGAGACACCATaGTATTCTCTTCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGPEETP*YSLPSP
Trigger: AGGCGAGGGAAGAGAATATCATGGTGTCTCCTCAGG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCGCAGTCGCTCTAGCTaGTTCAGGTCCTGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKRSRSS*FRSWKA
Trigger: CGCCTTCCAGGACCTGAAGCAGCTAGAGCGACTGCG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAAGCAGTCCACAATCGTaGCCTCACAGCGACACTTCT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQASSPQS*PHSDTS
Trigger: AGAAGTGTCGCTGTGAGGGCACGATTGTGGACTGCT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCTCCTGCACGCTGGCTaGTCCATCGAAAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLLLHAG*SIESSL
Trigger: GAGGGAGCTTTCGATGGAGCAGCCAGCGTGCAGGAG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGTCAGCATCAGCTCCTaGACGCTGGCTGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLVSISS*TLAAPS
Trigger: CGATGGAGCAGCCAGCGTGCAGGAGCTGATGCTGAC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACGCTGGAAATGTCATTaGCATGGAGGGTTAGCACTC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARWKCH*HGGLAL
Trigger: GAGTGCTAACCCTCCATGGCAATGACATTTCCAGCG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCACTCAGGTGGCAGGTaGCTCCATGCTGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPHSGGR*LHADRG
Trigger: ACCCCTGTCAGCATGGAGGCACCTGCCACCTGAGTG...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGTTGATCTCACACCGCTaGCCCTCAAAGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLISHR*PSKPRG
Trigger: CCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAA...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGTGCGCACCTCATGGATaGATCCGTGGAAGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRCAPHG*IRGSRL
Trigger: TAGGCGGCTTCCACGGATGCATCCATGAGGTGCGCA...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCGTGCTTGCACACGGTaGAGGACTTGCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKRACTR*RTCSLV
Trigger: CACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTATTTCCGCCGCTTGCTaGGGGTGGGCTGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCISAAC*GWAGST
Trigger: AGTGCTGCCAGCCCACCCGCAGCAAGCGGCGGAAAT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTAGAGGCTGGATAGGCTaGCCTTGGTCACTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRARGWIG*PWSLSL
Trigger: TAGGGAAAGTGACCAAGGGCAGCCTATCCAGCCTCT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCATGTGGGGACCATCTaGCTGGACATCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQHVGTI*LDIHCG
Trigger: CCCACAGTGGATGTCCAGGCAGATGGTCCCCACATG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCGTGGCAGTCCACGCTaGCAGCGGAGCAGGTACACT +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSRGSPR*QRSRYT
Trigger: AGTGTACCTGCTCCGCTGCCAGCGTGGACTGCCACG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTCGATGACGCTGACCTaGTTGTCTTCCAGATGCAAG +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRSMTLT*LSSRCK
Trigger: CTTGCATCTGGAAGACAACCAGGTCAGCGTCATCGA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGCCCTGGAAGGCATCTaGAGCAATATCCGATATCTG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAALEGI*SNIRYL
Trigger: CAGATATCGGATATTGCTCCAGATGCCTTCCAGGGC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCTCCTTGAGGAAAAATaGCTTCTGGCACCTAGGGTT +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGLLEEK*LLAPRV
Trigger: AACCCTAGGTGCCAGAAGCCATTTTTCCTCAAGGAG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCAGCCCGTTGAAGGCGTaGACGGGGATGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSSPLKA*TGMHLS
Trigger: GCTGAGGTGCATCCCCGTCCACGCCTTCAACGGGCT...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGAAATGTCATTGCCATaGAGGGTTAGCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAEMSLP*RVSTRR
Trigger: CCTGCGAGTGCTAACCCTCCATGGCAATGACATTTC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGCAGTCACAGTGGAGTaGGTTGGTTCCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSAVTVE*VGSQRQ
Trigger: CTGGCGCTGGGAACCAACCCACTCCACTGTGACTGC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCTGGAAGCGGTGGGTTaGGGTGGTGAGCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCLEAVG*GGEQEP
Trigger: AGGCTCCTGCTCACCACCCCAACCCACCGCTTCCAG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGTTGCACTGGAAGCGGTaGGTTGGGGTGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKLHWKR*VGVVSR
Trigger: CCTGCTCACCACCCCAACCCACCGCTTCCAGTGCAA...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTTGCACTGGAAGCGGTaGGTTGGGGTGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPLHWKR*VGVVSR
Trigger: CCTGCTCACCACCCCAACCCACCGCTTCCAGTGCAA...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTGCACTGGAAGCGGTaGGTTGGGGTGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLLHWKR*VGVVSR
Trigger: CCTGCTCACCACCCCAACCCACCGCTTCCAGTGCAA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTATTCTTGCACGGGCTaGAGAGGCAGGCATTGCATT +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVYSCTG*RGRHCI
Trigger: AATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTAGCTCAGGCACACAGTaGTCAATCACCTCGTCGCAT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGSSGTQ*SITSSH
Trigger: ATGCGACGAGGTGATTGACCACTGTGTGCCTGAGCT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCACTGGGCCCCGTTCTaGCACTCGTACTGGTCGCAT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSHWAPF*HSYWSH
Trigger: ATGCGACCAGTACGAGTGCCAGAACGGGGCCCAGTG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATGCACCACGATGCACTaGGCCCCGTTCTGGCACTCG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQCTTMH*APFWHS
Trigger: CGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGAGCCGCACGTGGCCCTaGTACAGCTCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPESRTWP*YSSSAR
Trigger: CCTGGCACTGGAGCTGTACCAGGGCCACGTGCGGCT...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTACTAGGTTCAGGGTCTaGTTTAGCGTCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRATRFRV*FSVTSS
Trigger: GGAGCTGGTGACGCTAAACCAGACCCTGAACCTAGT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAGAGGCCGGTGGAGGTaGGGATGCCTCCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLRGRWR*GCLQGR
Trigger: TCTACCTTGGAGGCATCCCCACCTCCACCGGCCTCT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGAGAGGCCGGTGGAGGTaGGGATGCCTCCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLRGRWR*GCLQGR
Trigger: TCTACCTTGGAGGCATCCCCACCTCCACCGGCCTCT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACACCCCCAGGGACTGTaGTGGGAGGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQHPQGL*WEGLEV
Trigger: GACTTCAAGGCCCTCCCACCACAGTCCCTGGGGGTG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCCATGGTGGCATCTGTaGCCGAGGCAGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYPWWHL*PRQGSR
Trigger: CCGGGACCCCTGCCTCGGCCACAGATGCCACCATGG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTACACATTTTCCATGGTaGCATCTGTGGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGTHFPW*HLWPRQ
Trigger: CTGCCTCGGCCACAGATGCCACCATGGAAAATGTGT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAAGAACCTTCCAGAGTTaGACATCTAGCGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQARTFQS*TSSAVG
Trigger: GCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTCT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTCTGGACTTCTGGTCTaGCTCCTCCACTTATCTGGT +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRSGLLV*LLHLSG
Trigger: ACCAGATAAGTGGAGGAGCCAGACCAGAAGTCCAGA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTTGGGTCTGGACTTCTaGTCTGGCTCCTCCACTTAT +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRLGLDF*SGSSTY
Trigger: ATAAGTGGAGGAGCCAGACCAGAAGTCCAGACCCAA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATATTCCCTGCGTCTTTaGCCCACCATTGGTACTCAC +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAYSLRL*PTIGTH
Trigger: GTGAGTACCAATGGTGGGCCAAAGACGCAGGGAATA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCCTGGGCCCAGATCCTaGCTCTACGGTTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGPGPRS*LYGLLD
Trigger: GTCTAATAAACCGTAGAGCCAGGATCTGGGCCCAGG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCCCTGCTGGCACCTGTaGCCCAGTTTAGCATGCACA +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQPCWHL*PSLACT
Trigger: TGTGCATGCTAAACTGGGCCACAGGTGCCAGCAGGG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCCCTGCTGGCACCTGTaGCCCAGTTTAGCATGCACA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRPCWHL*PSLACT
Trigger: TGTGCATGCTAAACTGGGCCACAGGTGCCAGCAGGG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCTCAAACAACCCTGCTaGCACCTGTGGCCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGLKQPC*HLWPSL
Trigger: TAAACTGGGCCACAGGTGCCAGCAGGGTTGTTTGAG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTTGGGGAAATGGAGGTTaGGAAGGGTGTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGWGNGG*EGCWAD
Trigger: ATCTGCCCAACACCCTTCCCAACCTCCATTTCCCCA...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATGGGGAAATGGAGGTTaGGAAGGGTGTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAWGNGG*EGCWAD
Trigger: ATCTGCCCAACACCCTTCCCAACCTCCATTTCCCCA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGACTGGCCCTTTGCACTaGAAGCGGTGGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKTGPLH*KRWVGV
Trigger: CACCCCAACCCACCGCTTCCAGTGCAAAGGGCCAGT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519560.6
3UTR CAA 72 bp CCTTCCAGAGTTGGACATCTAGCGCTGTGGGCAGACTaGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PSRVGHLALWAD*TWLPAFRFQEG
Trigger: CCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCCAACTCTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGCCATGCAGAGTGTaGACTGGCCAACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLEPCRV*TGQLSV
Trigger: GACGGACAGTTGGCCAGTTCACACTCTGCATGGCTC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGCACATCCGCCACGTTaGAGCCCCTCAAATGCACAG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKAHPPR*SPSNAQ
Trigger: CTGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGCACATCCGCCACGTTaGAGCCCCTCAAATGCACAG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLAHPPR*SPSNAQ
Trigger: CTGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAGGTTCTGCAGGTCCTaGAACGTGTTCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSRFCRS*NVFTRR
Trigger: CCTGCGGGTGAACACGTTTCAGGACCTGCAGAACCT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTCAGTCGCAGGTCGGTaGCATATTCAGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLSVAGR*HIQGGG
Trigger: GCCACCTCCCTGAATATGTCACCGACCTGCGACTGA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGGTGAGACATGTTACTaGAGGTGTAATTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGGETCY*RCNWSA
Trigger: TGCTGACCAATTACACCTTCAGTAACATGTCTCACC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAATACACACGTAGTTGTTaGTCCCGTCCACGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEYTRSC*SRPRRW
Trigger: CCACCTGCGTGGACGGGATCAACAACTACGTGTGTA...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCACTTGGCCTCATGCTaGCAGAGGTTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSHLASC*QRFSSG
Trigger: GCCTGAGCTGAACCTCTGTCAGCATGAGGCCAAGTG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGGTAGAGGGGGCTGTTaGTGCCCACTGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEGRGGC*CPLLAA
Trigger: AGCAGCCAGCAGTGGGCATCAACAGCCCCCTCTACC...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTACACTTGCACATGTATaGGGTCCCAGTTGCCACACA +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRATLAHV*GPSCHT
Trigger: TGTGTGGCAACTGGGACCTCATACATGTGCAAGTGT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCCCCACGACATTCCATaGTGGGCACCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSPHDIP*WAPWRL
Trigger: CAGCCTCCAAGGTGCCCATCATGGAATGTCGTGGGG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCTATCGTCATGCTGGTaGCCTGGAGGATCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLLSSCW*PGGSGG
Trigger: GCCACCTGATCCTCCAGGTCACCAGCATGACGATAG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTATCGTCATGCTGGTaGCCTGGAGGATCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLSSCW*PGGSGG
Trigger: GCCACCTGATCCTCCAGGTCACCAGCATGACGATAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGCCAGGGAGTTGGTGTaGACAGCTGAGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSARELV*TAEPWK
Trigger: CTTCCAGGGCTCAGCTGTTCACACCAACTCCCTGGC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACCAAACTCTTCTCCCTaGAACTCCTACAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAPNSSP*NSYSGS
Trigger: GCTTCCACTGTAGGAGTTTCAGGGAGAAGAGTTTGG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCTTGAGATGGCAGGCTaGGTAGGCTCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCLEMAG*VGSGLG
Trigger: ACCCAGCCCAGAGCCTACTCAGCCTGCCATCTCAAG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAAGCAAAGGCAGTGGGTaGCTGCTTGACTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQASKGSG*LLDFRV
Trigger: AACCCTAAAGTCAAGCAGTCACCCACTGCCTTTGCT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAACCAGTAATGCCCTATaGCTCCTCCAGCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQATSNAL*LLQLWY
Trigger: ATACCAGAGCTGGAGGAGTCATAGGGCATTACTGGT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTTTGAAGCCCCTCAAATaGACAGGAGCCATGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGLKPLK*TGAMQS
Trigger: ACTCTGCATGGCTCCTGTGCATTTGAGGGGCTTCAA...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAACGTACTCCTTCTTCTaGACATCCGCCACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQATYSFF*TSATLK
Trigger: CTTCAACGTGGCGGATGTGCAGAAGAAGGAGTACGT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGGCGTATTTCGACGATaGCCTCCGGCAAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLGVFRR*PPASWQ
Trigger: CTGCCAACTTGCCGGAGGGCATCGTCGAAATACGCC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGGCGTATTTCGACGATaGCCTCCGGCAAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPGVFRR*PPASWQ
Trigger: CTGCCAACTTGCCGGAGGGCATCGTCGAAATACGCC...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTGTCAGCATCAGCTCCTaGACGCTGGCTGCTCCATCG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCVSISS*TLAAPS
Trigger: CGATGGAGCAGCCAGCGTGCAGGAGCTGATGCTGAC...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCGGAACACGCGCCCGTaGACGGTCTCCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYRNTRP*TVSSWF
Trigger: GAACCAGCTGGAGACCGTGCACGGGCGCGTGTTCCG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCGCGGAGCCCCTTGTTaGTGCATCGCACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCRGAPC*CIAPLS
Trigger: AGACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCTTTGTCCAGGGGGATaGACTTGGCCTCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLCPGG*TWPHAD
Trigger: GTCAGCATGAGGCCAAGTGCATCCCCCTGGACAAAG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTCGCATGGGCTGGTCTaGAGTAGGACCATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSHGLV*SRTMGG
Trigger: CCCACCCATGGTCCTACTGCAGACCAGCCCATGCGA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTTGTCAGTGGCCACCTaGAGGGAGATGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLSVAT*REMLAW
Trigger: CCAGGCCAACATCTCCCTGCAGGTGGCCACTGACAA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCTTTGTAGAGAAGGATaGCGTTGTCCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGLCREG*RCPCQW
Trigger: CCACTGACAAGGACAACGGCATCCTTCTCTACAAAG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACGCCTGAATCACCTGTaGTCACCCATTCTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQARLNHL*SPILEE
Trigger: TTCCTCTAGAATGGGTGAGCACAGGTGATTCAGGCG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGTCACTTTCCCTAGATaGATAAGCCCTGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAVTFPR*ISPGLQ
Trigger: CTGGAGACCAGGGCTTATGCATCTAGGGAAAGTGAC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCCCTTCATTATTCCCTaGGTCTTTGGCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGPFIIP*VFGPPL
Trigger: CAATGGTGGGCCAAAGACGCAGGGAATAATGAAGGG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCACAAAACCACACTATaGCCTCTGCTTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVHKTTL*PLLPHH
Trigger: ATGATGGGGAAGCAGAGGGCATAGTGTGGTTTTGTG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGAGCTGCTTCAGGTCCTaGAAGGCGCCTCTCTCGATG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKSCFRS*KAPLSM
Trigger: CATCGAGAGAGGCGCCTTCCAGGACCTGAAGCAGCT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATTCCTCGGGATCCCCTaGATCTGGTTTTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAFLGIP*IWFSLK
Trigger: TTTGAGTGAAAACCAGATCCAGGGGATCCCGAGGAA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGCAGTACAGGTGGTTaGAGTGGAGGCGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSRSTGG*SGGAEF
Trigger: GAACTCTGCGCCTCCACTCCAACCACCTGTACTGCG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCAGTCGCAGTACAGGTaGTTGGAGTGGAGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKQSQYR*LEWRRR
Trigger: TCTGCGCCTCCACTCCAACCACCTGTACTGCGACTG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGCGAAGGGCAGGAGATaGAGTTGGCATTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEAKGRR*SWHCRM
Trigger: CATCCTGCAATGCCAACTCCATCTCCTGCCCTTCGC...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGCCCTGGAAGGCATCTaGAGCAATATCCGATATCTG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAALEGI*SNIRYL
Trigger: CAGATATCGGATATTGCTCCAGATGCCTTCCAGGGC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACACACAAATGGGTTTTaGGCTAAGTGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAHTNGF*AKWSVW
Trigger: CCAGACACTCCACTTAGCCCAAAACCCATTTGTGTG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCCCCGCTTGTCTCGATaGGGTTGTCCTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLPRLSR*GCPGGS
Trigger: ACTACCTCCAGGACAACCCCATCGAGACAAGCGGGG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTTCAGGGAGGTGGCTTaGGATGCGGACCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLFREVA*DADQLL
Trigger: CAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTCAGCTCCTGCACGCTaGCTGCTCCATCGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSSAPAR*LLHRKL
Trigger: GAGCTTTCGATGGAGCAGCCAGCGTGCAGGAGCTGA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTAGGAAAAATGGCTTCTaGCACCTAGGGTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRARKNGF*HLGFPL
Trigger: CAGTGGGAACCCTAGGTGCCAGAAGCCATTTTTCCT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGCTCAGGATCAGAGTaGAGAGGTGAGACATGTTAC +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGSSGSE*RGETCY
Trigger: GTAACATGTCTCACCTCTCCACTCTGATCCTGAGCT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCACAGTGGAGTGGGTTaGTTCCCAGCGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCHSGVG*FPAPDG
Trigger: CCCATCTGGCGCTGGGAACCAACCCACTCCACTGTG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGTCCCGTCCACGCAGGTaGCATTGTTTTCGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRSRPRR*HCFRSR
Trigger: ACGACTGCGAAAACAATGCCACCTGCGTGGACGGGA...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCCAGGGGGATGCACTTaGCCTCATGCTGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKPGGCT*PHADRG
Trigger: ACCTCTGTCAGCATGAGGCCAAGTGCATCCCCCTGG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGACTGGTCGCATGGGCTaGTCTGCAGTAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKTGRMG*SAVGPW
Trigger: CCATGGTCCTACTGCAGACCAGCCCATGCGACCAGT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTTCTGGCACTCGTACTaGTCGCATGGGCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLFWHSY*SHGLVC
Trigger: GCAGACCAGCCCATGCGACCAGTACGAGTGCCAGAA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGTTGATGCCCACTGCTaGCTGCTTCTGGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSVDAHC*LLLELP
Trigger: GGGAAGCTCCAGAAGCAGCCAGCAGTGGGCATCAAC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTCATGGATGCATCCGTaGAAGCCGCCTAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSWMHP*KPPRGR
Trigger: CCGGCCTCTAGGCGGCTTCCACGGATGCATCCATGA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGAGGCTGAGCAGGCATTaGCAGAGTCATTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRRLSRH*QSHSCC
Trigger: ACAACAAGAATGACTCTGCCAATGCCTGCTCAGCCT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGCACCTTGGAGGCTGTaGCACATGATGCATAACCTT +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAAPWRL*HMMHNL
Trigger: AAGGTTATGCATCATGTGCCACAGCCTCCAAGGTGC...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCAACTCCATCAAGCTaGAGTCCGAGAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSPTPSS*SPRGGR
Trigger: CCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCCAACTCCATCAAGCTaGAGTCCGAGAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKPTPSS*SPRGGR
Trigger: CCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCCAGGGGGTCCCACATaGCTGTCCCAACTCCATCAA +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPPGGPT*LSQLHQ
Trigger: TTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCCAGGGGGTCCCACATaGCTGTCCCAACTCCATCAA +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLPGGPT*LSQLHQ
Trigger: TTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGGAAAGTGTCACAGATaGGCAAGGAGTCTCTATCGT +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVGKCHR*ARSLYR
Trigger: ACGATAGAGACTCCTTGCCCATCTGTGACACTTTCC...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAAGAATCTCAAGCTTTaGGTCTGGACTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGKNLKL*VWTSGL
Trigger: CAGACCAGAAGTCCAGACCCAAAGCTTGAGATTCTT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGAATGGAGGCAGAGGCTaGATAGGCTGCCCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRNGGRG*IGCPWS
Trigger: TGACCAAGGGCAGCCTATCCAGCCTCTGCCTCCATT...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTTATTCCCTGCGTCTTTaGCCCACCATTGGTACTCAC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAYSLRL*PTIGTH
Trigger: GTGAGTACCAATGGTGGGCCAAAGACGCAGGGAATA...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTGGAGTCAGACAGCCTaGGCCCAGATCCTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLWSQTA*AQILAL
Trigger: TAGAGCCAGGATCTGGGCCCAGGCTGTCTGACTCCA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCAGGGGCATTGGTGGTaGGATAAGGCTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRQGHWW*DKAQIH
Trigger: GTGGATCTGAGCCTTATCCCACCACCAATGCCCCTG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACCTGGACATCCACTGTaGGGTAGCAGGAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAPGHPL*GSRKNF
Trigger: AAAGTTCTTCCTGCTACCCCACAGTGGATGTCCAGG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAGACTCGGAGGTTCTTaGGCCCAGCGAAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSRLGGS*AQRSPS
Trigger: AGATGGACTTCGCTGGGCTCAAGAACCTCCGAGTCT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR TCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGCCTCTCGCACCTCCTTaGTCTTATTGTTACTCAGAT +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRPLAPP*SYCYSD
Trigger: ATCTGAGTAACAATAAGATCAAGGAGGTGCGAGAGG...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTCTGGATGCAGGTGTTaGTGGGCACAGTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLSGCRC*WAQCSP
Trigger: AGGACTGCACTGTGCCCATCAACACCTGCATCCAGA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGTACACACGTAGTTGTTaGTCCCGTCCACGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKYTRSC*SRPRRW
Trigger: CCACCTGCGTGGACGGGATCAACAACTACGTGTGTA...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCACTTGGCCTCATGCTaGCAGAGGTTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSHLASC*QRFSSG
Trigger: GCCTGAGCTGAACCTCTGTCAGCATGAGGCCAAGTG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGTGACACTTGAAGGCTaGGCAGGCATTGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLVTLEG*AGIGRV
Trigger: GACTCTGCCAATGCCTGCTCAGCCTTCAAGTGTCAC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGGAGGCTGTGGCACATaGTGCATAACCTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSGGCGT*CITFLA
Trigger: CGCCAGAAAGGTTATGCATCATGTGCCACAGCCTCC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGGAGGCTGTGGCACATaGTGCATAACCTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLGGCGT*CITFLA
Trigger: CGCCAGAAAGGTTATGCATCATGTGCCACAGCCTCC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGCTTCCAAGAAGGGCTaGCTACCTTCTCTACTGGGA +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEASKKG*LPSLLG
Trigger: TCCCAGTAGAGAAGGTAGTCAGCCCTTCTTGGAAGC...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCGCTGTGGGCAGACTTaGCTTGGCTCCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYRCGQT*LGSQPS
Trigger: GGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGGTTGGTGTGAACAGCTaGGCCCTGGAAGATATGTGG +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQVGVNS*ALEDMW
Trigger: CCACATATCTTCCAGGGCTCAGCTGTTCACACCAAC...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACAGGAGCAAATTAACTaGACTCTTCCTGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAQEQIN*TLPASW
Trigger: CCATGAGGCAGGAAGAGTTCAGTTAATTTGCTCCTG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCTTTGCCAAATGCCTaGTTATGCCTTTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGALPNA*LCLYWS
Trigger: GGACCAGTAAAGGCATAATCAGGCATTTGGCAAAGC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATGGTTGTTGTCCAGTTaGAGGTTCTTCACATCGGTG +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAWLLSS*RFFTSV
Trigger: CACCGATGTGAAGAACCTGCAACTGGACAACAACCA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTGGGTGAAGGCTCCTaGAGGGATGGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLGEGS*RDGFDG
Trigger: TCCATCAAAGCCATCCCTGCAGGAGCCTTCACCCAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCCGGAACACGCGCCCGTaGACGGTCTCCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIRNTRP*TVSSWF
Trigger: GAACCAGCTGGAGACCGTGCACGGGCGCGTGTTCCG...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGACAGCCACCGAAGACTaGAGTCACAGTGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLTATED*SHSGVG
Trigger: ACCCACTCCACTGTGACTGCAGTCTTCGGTGGCTGT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCACAGCCACCGAAGACTaGAGTCACAGTGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPTATED*SHSGVG
Trigger: ACCCACTCCACTGTGACTGCAGTCTTCGGTGGCTGT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTACTGCAGCGGGCGATaGCAGGCTCCTTGTACCCCG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYYCSGR*QAPCTP
Trigger: CGGGGTACAAGGAGCCTGGCATCGCCCGCTGCAGTA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCACAGGGTCCTGGGTaGATGTCCCGTTATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSPQGPG*MSRYSC
Trigger: GCAAGAATAACGGGACATGCACCCAGGACCCTGTGG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTTGATCTCACACCGCTaGCCCTCAAAGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSLISHR*PSKPRG
Trigger: CCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGCTTTGTCCAGGGGGATaGACTTGGCCTCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLLCPGG*TWPHAD
Trigger: GTCAGCATGAGGCCAAGTGCATCCCCCTGGACAAAG...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTTGTCAGTGGCCACCTaGAGGGAGATGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSLSVAT*REMLAW
Trigger: CCAGGCCAACATCTCCCTGCAGGTGGCCACTGACAA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCTGGTACAGCTCCAGTaGCAGGGGGTCATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSLVQLQ*QGVIVS
Trigger: GGAGACAATGACCCCCTGGCACTGGAGCTGTACCAG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGCTGTTGATGCCCACTaGTGGCTGCTTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLAVDAH*WLLLEL
Trigger: AAGCTCCAGAAGCAGCCAGCAGTGGGCATCAACAGC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGCTGTTGATGCCCACTaGTGGCTGCTTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSAVDAH*WLLLEL
Trigger: AAGCTCCAGAAGCAGCCAGCAGTGGGCATCAACAGC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCACGAGGAGCCGTCCGTaGACTGGAAGACGTATTTCC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSTRSRP*TGRRIS
Trigger: GGAAATACGTCTTCCAGTGCACGGACGGCTCCTCGT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGACGAGGAGCCGTCCGTaGACTGGAAGACGTATTTCC +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLTRSRP*TGRRIS
Trigger: GGAAATACGTCTTCCAGTGCACGGACGGCTCCTCGT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCAGCTCTTGGTCTACTaGCGACATAATACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVQLLVY*RHNTVS
Trigger: TGAAACGGTATTATGTCGGCAGTAGACCAAGAGCTG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGAGAGGCTGGATAGGCTaGCCTTGGTCACTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRRGWIG*PWSLSL
Trigger: TAGGGAAAGTGACCAAGGGCAGCCTATCCAGCCTCT...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGAACCAGAGCTTGTCTTaGTCTTCCCTTCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVNQSLS*SSLPQT
Trigger: TGTTTGAGGAAGGGAAGAGCAAGACAAGCTCTGGTT...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGGGCAGGTCACTTGTTaGTATGGGCTTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKGQVTC*YGLLLP
Trigger: TGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGACCCTCAGTTTTCCTaGCTACCAGTAATGCCCTAT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQADPQFS*LPVMPY
Trigger: ATAGGGCATTACTGGTAGGCAGGAAAACTGAGGGTC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTAGCTGCTTCAGGTCCTaGAAGGCGCCTCTCTCGATG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSCFRS*KAPLSM
Trigger: CATCGAGAGAGGCGCCTTCCAGGACCTGAAGCAGCT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATTCCTCGGGATCCCCTaGATCTGGTTTTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAFLGIP*IWFSLK
Trigger: TTTGAGTGAAAACCAGATCCAGGGGATCCCGAGGAA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGGATCTTCGGCATGTaGTTGAAGCTGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSRIFGM*LKLVTR
Trigger: CCTGGTCACCAGCTTCAACCACATGCCGAAGATCCG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGCGGATCTTCGGCATGTaGTTGAAGCTGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLRIFGM*LKLVTR
Trigger: CCTGGTCACCAGCTTCAACCACATGCCGAAGATCCG...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTACAGGTGGTTGGAGTaGAGGCGCAGAGTTCGGATC +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPYRWLE*RRRVRI
Trigger: GATCCGAACTCTGCGCCTCCACTCCAACCACCTGTA...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAATGCAGAGTGTGAACTaGCCAACTGTCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEMQSVN*PTVRRC
Trigger: ACAGCGACGGACAGTTGGCCAGTTCACACTCTGCAT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGCGAAGGGCAGGAGATaGAGTTGGCATTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKAKGRR*SWHCRM
Trigger: CATCCTGCAATGCCAACTCCATCTCCTGCCCTTCGC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACCCCGCTTGTCTCGATaGGGTTGTCCTGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQPRLSR*GCPGGS
Trigger: ACTACCTCCAGGACAACCCCATCGAGACAAGCGGGG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAACAGGAGGTTTATGGTaGACAGGGAGACAAGCGTGG +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQETGGLW*TGRQAW
Trigger: CCACGCTTGTCTCCCTGTCCACCATAAACCTCCTGT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGAGACTGCAGTCACAGTaGAGTGGGTTGGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLRLQSQ*SGLVPS
Trigger: GCTGGGAACCAACCCACTCCACTGTGACTGCAGTCT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCTGGAAGCGGTGGGTTaGGGTGGTGAGCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYLEAVG*GGEQEP
Trigger: AGGCTCCTGCTCACCACCCCAACCCACCGCTTCCAG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAGAGTACTTTGCACTaGAAGCGGTGGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSQSTLH*KRWVGV
Trigger: CACCCCAACCCACCGCTTCCAGTGCAAAGTACTCTG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAACTGTACACTGTGGTTaGAGGGGAACTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQETVHCG*RGTQAV
Trigger: GACAGCCTGAGTTCCCCTCCAACCACAGTGTACAGT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGCCACACTGTACACTGTaGTTGGAGGGGAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLPHCTL*LEGNSG
Trigger: GCCTGAGTTCCCCTCCAACCACAGTGTACAGTGTGG...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCACACTGTACACTGTaGTTGGAGGGGAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSPHCTL*LEGNSG
Trigger: GCCTGAGTTCCCCTCCAACCACAGTGTACAGTGTGG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTTGATGCGCACCTCATaGATGCATCCGTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLLMRTS*MHPWKP
Trigger: CGGCTTCCACGGATGCATCCATGAGGTGCGCATCAA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGCCACACATTTTCCATaGTGGCATCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLATHFP*WHLWPR
Trigger: CCTCGGCCACAGATGCCACCATGGAAAATGTGTGGC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTCAATGAGCAGCTCTTaGTCTACTGCCGACATAATA +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGSMSSS*STADII
Trigger: TATTATGTCGGCAGTAGACCAAGAGCTGCTCATTGA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGGGAAGACCCCTCTCCTaGGGAGGAGCAGGAAAAATA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRGRPLS*GGAGKI
Trigger: TATTTTTCCTGCTCCTCCCCAGGAGAGGGGTCTTCC...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGGACATCTAGCGCTGTaGGCAGACTTGACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLGHLAL*ADLTWL
Trigger: GAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAACCTGGAGGATCAGGTaGCAGAGGCCTGTCTTACAA +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQETWRIR*QRPVLQ
Trigger: TTGTAAGACAGGCCTCTGCCACCTGATCCTCCAGGT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAAGAATCTCAAGCTTTaGGTCTGGACTTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAKNLKL*VWTSGL
Trigger: CAGACCAGAAGTCCAGACCCAAAGCTTGAGATTCTT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGAATGGAGGCAGAGGCTaGATAGGCTGCCCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLNGGRG*IGCPWS
Trigger: TGACCAAGGGCAGCCTATCCAGCCTCTGCCTCCATT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCTGAAACTCCTACAGTaGAAGCTCCTGGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLKLLQ*KLLGEG
Trigger: TCCTTCCCCCAGGAGCTTCCACTGTAGGAGTTTCAG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGTGGGGATGGGGAAATaGAGGTTGGGAAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLVGMGK*RLGRVL
Trigger: CAACACCCTTCCCAACCTCCATTTCCCCATCCCCAC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCAGGGGCATTGGTGGTaGGATAAGGCTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKQGHWW*DKAQIH
Trigger: GTGGATCTGAGCCTTATCCCACCACCAATGCCCCTG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACAGGCTGAGTAGGCTCTaGGCTGGGTGGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYRLSRL*AGWGEA
Trigger: AGCCTCTCCCCACCCAGCCCAGAGCCTACTCAGCCT...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTTGGTTGATGGGGGCTaGATTCAGGATTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLLVDGG*IQDWAQ
Trigger: CTGGGCCCAATCCTGAATCCAGCCCCCATCAACCAA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATATAAGGGACAGACCTaGCCCTTTTGCTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAYKGQT*PFCCLG
Trigger: ACCAAGACAGCAAAAGGGCCAGGTCTGTCCCTTATA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTCAAATCTAGTCTGGTaGGCTTCGGCGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSSNLVW*ASACSG
Trigger: TCCAGAGCACGCCGAAGCTCACCAGACTAGATTTGA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTGCAGGGATGGCTTTaGTGGAGTTCTGTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLQGWL*WSSVLG
Trigger: GCCTAGAACAGAACTCCATCAAAGCCATCCCTGCAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTGTTTCTTGTACTGGGTaGAGGCTCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCVSCTG*RLLQGW
Trigger: CCATCCCTGCAGGAGCCTTCACCCAGTACAAGAAAC...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTACAGGACCAGCGATGTaGGTGATTTCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCTGPAM*VISGPG
Trigger: TCCAGGGCCTGAAATCACTCACATCGCTGGTCCTGT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACCTCTCGCACCTCCTTaGTCTTATTGTTACTCAGAT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAPLAPP*SYCYSD
Trigger: ATCTGAGTAACAATAAGATCAAGGAGGTGCGAGAGG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTACACACGTAGTTGTTaGTCCCGTCCACGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCYTRSC*SRPRRW
Trigger: CCACCTGCGTGGACGGGATCAACAACTACGTGTGTA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTGCATGTGTAGCCATTaGTTGTGTCCACGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLCMCSH*LCPRTG
Trigger: CCCAGTGCGTGGACACAATCAATGGCTACACATGCA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCATTTCCTTCATGCTaGATCACCAGGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLSFPSC*ITRGSH
Trigger: GTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGACAGCAATATTTTTaGGTGGCAGTGAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAGQQYF*VAVRLR
Trigger: TCTCAGTCTCACTGCCACTCAAAAATATTGCTGTCC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCAGTGCATGGGTCCTaGGGAGACACCATGATATTC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSPVHGS*GDTMIF
Trigger: GAATATCATGGTGTCTCCTCAGGACCCATGCACTGG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTTTCCTTTGGCACTGTTaGGCCCACACTACAAAACAT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGFLWHC*AHTTKH
Trigger: ATGTTTTGTAGTGTGGGCTCAACAGTGCCAAAGGAA...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTGGGTGAAGGCTCCTaGAGGGATGGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLGEGS*RDGFDG
Trigger: TCCATCAAAGCCATCCCTGCAGGAGCCTTCACCCAG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATGTCCCGTTATTCTTaGACGGGCTGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSMSRYS*TGWRGR
Trigger: CCTGCCTCTCCAGCCCGTGCAAGAATAACGGGACAT...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTTTGTCCAGGGGGATaGACTTGGCCTCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLCPGG*TWPHAD
Trigger: GTCAGCATGAGGCCAAGTGCATCCCCCTGGACAAAG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTACGAGGAGCCGTCCGTaGACTGGAAGACGTATTTCC +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCTRSRP*TGRRIS
Trigger: GGAAATACGTCTTCCAGTGCACGGACGGCTCCTCGT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCAGCTCTTGGTCTACTaGCGACATAATACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGQLLVY*RHNTVS
Trigger: TGAAACGGTATTATGTCGGCAGTAGACCAAGAGCTG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCTTTTCCGGCAGGGCTaGTCTGATGGATTTAAGCCG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLLFRQG*SDGFKP
Trigger: CGGCTTAAATCCATCAGAGCAGCCCTGCCGGAAAAG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGCAAGCTTTGCCAAATaGCTGATTATGCCTTTACTG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGASFAK*LIMPLL
Trigger: CAGTAAAGGCATAATCAGGCATTTGGCAAAGCTTGC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACGGATCTTCGGCATGTaGTTGAAGCTGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQRIFGM*LKLVTR
Trigger: CCTGGTCACCAGCTTCAACCACATGCCGAAGATCCG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCATGCAGAGTGTGAACTaGCCAACTGTCCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSMQSVN*PTVRRC
Trigger: ACAGCGACGGACAGTTGGCCAGTTCACACTCTGCAT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGCCAGCCACTTCAAGTaGCAGTCGCACACAAATGGG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQASHFK*QSHTNG
Trigger: CCCATTTGTGTGCGACTGCCACTTGAAGTGGCTGGC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGATGCGGACCAGCTTCTaGTTGGAGCAGTCCACAATC +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLMRTSF*LEQSTI
Trigger: GATTGTGGACTGCTCCAACCAGAAGCTGGTCCGCAT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTACATATTCAGGGAGGTaGCTTGGGATGCGGACCAGC +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCTYSGR*LGMRTS
Trigger: GCTGGTCCGCATCCCAAGCCACCTCCCTGAATATGT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGACAGGAGGTTTATGGTaGACAGGGAGACAAGCGTGG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLTGGLW*TGRQAW
Trigger: CCACGCTTGTCTCCCTGTCCACCATAAACCTCCTGT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCGCTCGGTCACATCCTTaGGCATGCCTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIARSHP*ACLWGG
Trigger: CCCTCCCCAGAGGCATGCCCAAGGATGTGACCGAGC...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGTTCCCAGCGCCAGATaGGAAAGAGATGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQVPSAR*ERDVRS
Trigger: CGACCTCACATCTCTTTCCCATCTGGCGCTGGGAAC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACAGAGTACTTTGCACTaGAAGCGGTGGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQQSTLH*KRWVGV
Trigger: CACCCCAACCCACCGCTTCCAGTGCAAAGTACTCTG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGTCCTCACAGTCATCTaGGTTGATCTCACACCGCTG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLVLTVI*VDLTPL
Trigger: CAGCGGTGTGAGATCAACCCAGATGACTGTGAGGAC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATCCCGTCCACGCAGGTaGCATTGTTTTCGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQSRPRR*HCFRSR
Trigger: ACGACTGCGAAAACAATGCCACCTGCGTGGACGGGA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCACTGGGCCCCGTTCTaGCACTCGTACTGGTCGCAT +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYHWAPF*HSYWSH
Trigger: ATGCGACCAGTACGAGTGCCAGAACGGGGCCCAGTG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCAGGGAGATGTTGGCCTaGGGTCGGACCTTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIREMLA*GRTLAE
Trigger: CTCCGCCAAGGTCCGACCCCAGGCCAACATCTCCCT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATTGATGCGCACCTCATaGATGCATCCGTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLMRTS*MHPWKP
Trigger: CGGCTTCCACGGATGCATCCATGAGGTGCGCATCAA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCCACCCCCAGGGACTGTaGTGGGAGGGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIHPQGL*WEGLEV
Trigger: GACTTCAAGGCCCTCCCACCACAGTCCCTGGGGGTG...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACTCCTGATCGCAGAGTaGGCCGGTCCAGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGELLIAE*AGPAWA
Trigger: CGCCCAGGCTGGACCGGCCCACTCTGCGATCAGGAG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGACACATTTTCCATGGTaGCATCTGTGGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKTHFPW*HLWPRQ
Trigger: CTGCCTCGGCCACAGATGCCACCATGGAAAATGTGT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCACGGATTCTCTTGTTaGCAGTGCTCGCCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSHGFSC*QCSPLK
Trigger: CTTTAGCGGCGAGCACTGCCAACAAGAGAATCCGTG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTGCCGCTTGCTGCGGGTaGGCTGGCAGCACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLAACCG*AGSTGA
Trigger: GGCCCCAGTGCTGCCAGCCCACCCGCAGCAAGCGGC...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATTTTCCTGGAAGAACTaGGCATTTTGGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAFSWKN*AFWALT
Trigger: TGTCAGTGCCCAAAATGCCCAGTTCTTCCAGGAAAA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCACCTGGAGGATCAGGTaGCAGAGGCCTGTCTTACAA +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSTWRIR*QRPVLQ
Trigger: TTGTAAGACAGGCCTCTGCCACCTGATCCTCCAGGT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAATGGATAGGCTGCCCTTaGTCACTTTCCCTAGATGCA +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEWIGCP*SLSLDA
Trigger: TGCATCTAGGGAAAGTGACCAAGGGCAGCCTATCCA...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGTGGATAGGCTGCCCTTaGTCACTTTCCCTAGATGCA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRWIGCP*SLSLDA
Trigger: TGCATCTAGGGAAAGTGACCAAGGGCAGCCTATCCA...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGCTAACCTGATGGGGTaGAAGGGGGCAAATGGGAGT +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSANLMG*KGANGS
Trigger: ACTCCCATTTGCCCCCTTCCACCCCATCAGGTTAGC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTGCTAACCTGATGGGGTaGAAGGGGGCAAATGGGAGT +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCANLMG*KGANGS
Trigger: ACTCCCATTTGCCCCCTTCCACCCCATCAGGTTAGC...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTATGCACAGCTCTTTGTaGTCAAAACCCTACCTTCCT +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGMHSSL*SKPYLP
Trigger: AGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCAT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTCAAACAACCCTGCTaGCACCTGTGGCCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLKQPC*HLWPSL
Trigger: TAAACTGGGCCACAGGTGCCAGCAGGGTTGTTTGAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTCTAACAAGGGCCTTTTaGCATGTCCATAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRALTRAF*HVHNSN
Trigger: GTTGCTGTTATGGACATGCCAAAAGGCCCTTGTTAG...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAGATCATCCTGGTCCTaGCCTTTCCTGAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPRSSWS*PFLKVT
Trigger: GGTGACCTTCAGGAAAGGCCAGGACCAGGATGATCT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTGCTTCCCCATCATGTaGGGACCATCTGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCCFPIM*GPSAWT
Trigger: TGTCCAGGCAGATGGTCCCCACATGATGGGGAAGCA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTCAAATCTAGTCTGGTaGGCTTCGGCGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSNLVW*ASACSG
Trigger: TCCAGAGCACGCCGAAGCTCACCAGACTAGATTTGA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCTGCAGGGATGGCTTTaGTGGAGTTCTGTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSLQGWL*WSSVLG
Trigger: GCCTAGAACAGAACTCCATCAAAGCCATCCCTGCAG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGCAATATCCGATATCTaGTTCTTGCTGATGTCTATT +
Preference number: 4 (lower is better)
Translates to: HGCPNSIKLESERWQAGGAISDI*FLLMSI
Trigger: AATAGACATCAGCAAGAATCAGATATCGGATATTGC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGGATGGGAATCTCCTTaGGGAAAAATGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKGWESP*GKMASG
Trigger: GCCAGAAGCCATTTTTCCTCAAGGAGATTCCCATCC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGACCAGCTCCACACTGTaGAACTGCCCATCATTCACT +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKTSSTL*NCPSFT
Trigger: AGTGAATGATGGGCAGTTTCACAGTGTGGAGCTGGT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATGGACTTGCAGCCTGGTaGCACCCCCAGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNGLAAW*HPQGLW
Trigger: CCACAGTCCCTGGGGGTGTCACCAGGCTGCAAGTCC...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATCATTTCCTTCATGCTaGATCACCAGGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQSFPSC*ITRGSH
Trigger: GTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGATATGTGGCTAACCTaGTGGGGTGGAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEDMWLT*WGGRGQ
Trigger: TTGCCCCCTTCCACCCCATCAGGTTAGCCACATATC...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGGGTTTAGTGGTTGAGTaGGCAAGTTCTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRGLVVE*ASSGVR
Trigger: TCTGACTCCAGAACTTGCTCACTCAACCACTAAACC...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGGGTTTAGTGGTTGAGTaGGCAAGTTCTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQGLVVE*ASSGVR
Trigger: TCTGACTCCAGAACTTGCTCACTCAACCACTAAACC...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTGCCACCCTAGATTTTaGCTCTTCCCCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLCHPRF*LFPKQA
Trigger: GGCTTGTTTGGGGAAGAGTCAAAATCTAGGGTGGCA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCAAGTCCATTTTGGGTaGCAGCTCTGTCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQQVHFG*QLCLLF
Trigger: AAAGAGGAGACAGAGCTGTCACCCAAAATGGACTTG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTACCATAGACATTTGTaGTCCATCTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLYHRHL*SIWPAV
Trigger: CACTGCCGGCCAGATGGATCACAAATGTCTATGGTA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCACCAGTAATGCCCTATaGCTCCTCCAGCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPTSNAL*LLQLWY
Trigger: ATACCAGAGCTGGAGGAGTCATAGGGCATTACTGGT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAATTCTGGAAGGACTTaGAGCTTATTCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGNSGRT*SLFLFR
Trigger: CCTGAACAAGAATAAGCTGCAAGTCCTTCCAGAATT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTTGAAGCCCCTCAAATaGACAGGAGCCATGCAGAGT +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLLKPLK*TGAMQS
Trigger: ACTCTGCATGGCTCCTGTGCATTTGAGGGGCTTCAA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGACGTACTCCTTCTTCTaGACATCCGCCACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKTYSFF*TSATLK
Trigger: CTTCAACGTGGCGGATGTGCAGAAGAAGGAGTACGT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAAGTCCACGATGTTATTaGTGCACGTGCAGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQSPRCY*CTCRAK
Trigger: CTTCGCCCTGCACGTGCAGCAATAACATCGTGGACT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTAGTCCACGATGTTATTaGTGCACGTGCAGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSPRCY*CTCRAK
Trigger: CTTCGCCCTGCACGTGCAGCAATAACATCGTGGACT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTAGCAGTCCACAATCGTaGCCTCACAGCGACACTTCT +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSSPQS*PHSDTS
Trigger: AGAAGTGTCGCTGTGAGGGCACGATTGTGGACTGCT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCGCTGGAAATGTCATTaGCATGGAGGGTTAGCACTC +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPRWKCH*HGGLAL
Trigger: GAGTGCTAACCCTCCATGGCAATGACATTTCCAGCG...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTTCTCTTGTTGGCAGTaGTCGCCGCTAAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYFSCWQ*SPLKPG
Trigger: GCCCGGCTTTAGCGGCGAGCACTGCCAACAAGAGAA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGTCACTTTCCCTAGATaGATAAGCCCTGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLVTFPR*ISPGLQ
Trigger: CTGGAGACCAGGGCTTATGCATCTAGGGAAAGTGAC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGCCCTTCATTATTCCCTaGGTCTTTGGCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLPFIIP*VFGPPL
Trigger: CAATGGTGGGCCAAAGACGCAGGGAATAATGAAGGG...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTCTGGCCATATCTCATTaGTTTTTAAAAGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRALAISH*FLKGHS
Trigger: GGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAG...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGTGGCCCAGTTTAGCATaGACAGCTCTTTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRWPSLA*TALCGQ
Trigger: TTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCA...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTTTCTAGAATGTGACTaGTCAAGGAGAGAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRFLECD*SRRERF
Trigger: AAAACGCTCTCTCCTTGAGCAGTCACATTCTAGAAA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGAAGGCAGTGGGTGACTaGTTGACTTTAGGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQKAVGD*LTLGFS
Trigger: ACTGAACCCTAAAGTCAAGCAGTCACCCACTGCCTT...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGGGCAGGTCACTTGTTaGTATGGGCTTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEGQVTC*YGLLLP
Trigger: TGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCC...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTGTCCACTGGCCCTTTaGACTGGAAGCGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYCPLAL*TGSGGL
Trigger: CAACCCACCGCTTCCAGTGCAAAGGGCCAGTGGACA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCGATGACGCTGACCTaGTTGTCTTCCAGATGCAAG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLSMTLT*LSSRCK
Trigger: CTTGCATCTGGAAGACAACCAGGTCAGCGTCATCGA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGCGAAGGGCAGGAGATaGAGTTGGCATTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEAKGRR*SWHCRM
Trigger: CATCCTGCAATGCCAACTCCATCTCCTGCCCTTCGC...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGCCCTGGAAGGCATCTaGAGCAATATCCGATATCTG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLALEGI*SNIRYL
Trigger: CAGATATCGGATATTGCTCCAGATGCCTTCCAGGGC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTACAGGAGGTTTATGGTaGACAGGGAGACAAGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCTGGLW*TGRQAW
Trigger: CCACGCTTGTCTCCCTGTCCACCATAAACCTCCTGT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTGGACAGGAGGTTTATaGTGGACAGGGAGACAAGCG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSWTGGL*WTGRQA
Trigger: CGCTTGTCTCCCTGTCCACCATAAACCTCCTGTCCA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAGGAAAAATGGCTTCTaGCACCTAGGGTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLRKNGF*HLGFPL
Trigger: CAGTGGGAACCCTAGGTGCCAGAAGCCATTTTTCCT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGAAATGTCATTGCCATaGAGGGTTAGCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKEMSLP*RVSTRR
Trigger: CCTGCGAGTGCTAACCCTCCATGGCAATGACATTTC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAATGTTGATGTCCACTaGCCCTGGGCAGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSNVDVH*PWAAKP
Trigger: TGGTTTTGCTGCCCAGGGCCAGTGGACATCAACATT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGTCCTCACAGTCATCTaGGTTGATCTCACACCGCTG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSVLTVI*VDLTPL
Trigger: CAGCGGTGTGAGATCAACCCAGATGACTGTGAGGAC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTACTGTACACTGTGGTTaGAGGGGAACTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCTVHCG*RGTQAV
Trigger: GACAGCCTGAGTTCCCCTCCAACCACAGTGTACAGT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTACTAGGTTCAGGGTCTaGTTTAGCGTCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCTRFRV*FSVTSS
Trigger: GGAGCTGGTGACGCTAAACCAGACCCTGAACCTAGT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTTCCCCAGGCTCTTTaGAGTTCCTTTGTCCACTAC +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKLPQAL*SSFVHY
Trigger: GTAGTGGACAAAGGAACTCCAAAGAGCCTGGGGAAG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTTCCCCAGGCTCTTTaGAGTTCCTTTGTCCACTAC +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLPQAL*SSFVHY
Trigger: GTAGTGGACAAAGGAACTCCAAAGAGCCTGGGGAAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACGTTGATGCCCACTGCTaGCTGCTTCTGGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYVDAHC*LLLELP
Trigger: GGGAAGCTCCAGAAGCAGCCAGCAGTGGGCATCAAC...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAACACATTTTCCATGGTaGCATCTGTGGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQTHFPW*HLWPRQ
Trigger: CTGCCTCGGCCACAGATGCCACCATGGAAAATGTGT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGAGGCTGAGCAGGCATTaGCAGAGTCATTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQRLSRH*QSHSCC
Trigger: ACAACAAGAATGACTCTGCCAATGCCTGCTCAGCCT...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACACGGATTCTCTTGTTaGCAGTGCTCGCCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQHGFSC*QCSPLK
Trigger: CTTTAGCGGCGAGCACTGCCAACAAGAGAATCCGTG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGCACCTTGGAGGCTGTaGCACATGATGCATAACCTT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLAPWRL*HMMHNL
Trigger: AAGGTTATGCATCATGTGCCACAGCCTCCAAGGTGC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGAAGAACTGGGCATTTTaGGCACTGACATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQKNWAF*ALTSRT
Trigger: AGTCCTGGATGTCAGTGCCCAAAATGCCCAGTTCTT...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGGAAGACCCCTCTCCTaGGGAGGAGCAGGAAAAATA +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSGRPLS*GGAGKI
Trigger: TATTTTTCCTGCTCCTCCCCAGGAGAGGGGTCTTCC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGTACAGTGGAAGCTCCTaGGGGAAGGAGGGATGGATG +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEYSGSS*GKEGWM
Trigger: CATCCATCCCTCCTTCCCCCAGGAGCTTCCACTGTA...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAGAAGTTCCCTCCTCTaGACAGCCACTTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLRSSLL*TATSIA
Trigger: AGCAATGGAAGTGGCTGTCCAGAGGAGGGAACTTCT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAAGATCATCCTGGTCCTaGCCTTTCCTGAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQRSSWS*PFLKVT
Trigger: GGTGACCTTCAGGAAAGGCCAGGACCAGGATGATCT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAATGTTGATGTCCACTaGCCCTTTGCACTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLNVDVH*PFALEA
Trigger: CGCTTCCAGTGCAAAGGGCCAGTGGACATCAACATT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519560.6
3UTR CAA 72 bp CTGGCACCTGTGGCCCAGTTTAGCATGCACAGCTCTTaGTGGTCAAAACCCTACCTTCCTACCTACCCCATT +
Preference number: 4 (lower is better)
Translates to: LAPVAQFSMHSS*WSKPYLPTYPI
Trigger: AATGGGGTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCACAGGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACGTTTCTTGTACTGGGTaGAGGCTCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYVSCTG*RLLQGW
Trigger: CCATCCCTGCAGGAGCCTTCACCCAGTACAAGAAAC...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAACCTCTCGCACCTCCTTaGTCTTATTGTTACTCAGAT +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQEPLAPP*SYCYSD
Trigger: ATCTGAGTAACAATAAGATCAAGGAGGTGCGAGAGG...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGGATGGGAATCTCCTTaGGGAAAAATGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQGWESP*GKMASG
Trigger: GCCAGAAGCCATTTTTCCTCAAGGAGATTCCCATCC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAATTGGTCAGCATGCTaGTGCTGTTGTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLNWSAC*CCCCSG
Trigger: ACCTGAGCAACAACAGCATCAGCATGCTGACCAATT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGAATTGGTCAGCATGCTaGTGCTGTTGTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKNWSAC*CCCCSG
Trigger: ACCTGAGCAACAACAGCATCAGCATGCTGACCAATT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAACACTTGCACATGTATaGGGTCCCAGTTGCCACACA +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQTLAHV*GPSCHT
Trigger: TGTGTGGCAACTGGGACCTCATACATGTGCAAGTGT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTTGGGATACATTCCAATaGAAAATTACCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGWDTFQ*KITWKE
Trigger: CTCCTTCCAGGTAATTTTTCATTGGAATGTATCCCA...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCAAGTCCATTTTGGGTaGCAGCTCTGTCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLQVHFG*QLCLLF
Trigger: AAAGAGGAGACAGAGCTGTCACCCAAAATGGACTTG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTTTTGCTGTCTTGGTTaGTGGGGGCTGGATTCAGGA +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCFCCLG*WGLDSG
Trigger: TCCTGAATCCAGCCCCCATCAACCAAGACAGCAAAA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCAGGGCTTCCAAACTTaGGGGAGAAGGCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKQGFQT*GRRLKI
Trigger: AATTTTGAGCCTTCTCCCTCAAGTTTGGAAGCCCTG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGCTTTGCCAAATGCCTaGTTATGCCTTTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLALPNA*LCLYWS
Trigger: GGACCAGTAAAGGCATAATCAGGCATTTGGCAAAGC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTATTTGGCCACAATGTTaGTGTCCACTGGCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCIWPQC*CPLALC
Trigger: GCAAAGGGCCAGTGGACATCAACATTGTGGCCAAAT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGTGGTTGTTGTCCAGTTaGAGGTTCTTCACATCGGTG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKWLLSS*RFFTSV
Trigger: CACCGATGTGAAGAACCTGCAACTGGACAACAACCA...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAAAACCAGAGTACTTTaGACTGGAAGCGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSKTRVL*TGSGGL
Trigger: CAACCCACCGCTTCCAGTGCAAAGTACTCTGGTTTT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR GCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACATGTCCCGTTATTCTTaGACGGGCTGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYMSRYS*TGWRGR
Trigger: CCTGCCTCTCCAGCCCGTGCAAGAATAACGGGACAT...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCTTGATCTCACACCGCTaGCCCTCAAAGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSILISHR*PSKPRG
Trigger: CCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAA...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCTTTGTAGAGAAGGATaGCGTTGTCCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLLCREG*RCPCQW
Trigger: CCACTGACAAGGACAACGGCATCCTTCTCTACAAAG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCCTGGTACAGCTCCAGTaGCAGGGGGTCATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSILVQLQ*QGVIVS
Trigger: GGAGACAATGACCCCCTGGCACTGGAGCTGTACCAG...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACAGCCCTCGGCACACTTaGACATGTATGAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYSPRHT*TCMRSQ
Trigger: CTGGGACCTCATACATGTGCAAGTGTGCCGAGGGCT...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGTTATCCCTCTTCTTaGCCTTCTTCTCATCTTTTT +
Preference number: 4 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGSYPSS*PSSHLF
Trigger: AAAAAGATGAGAAGAAGGGCAAGAAGAGGGATAACT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGACCCTCAGTTTTCCTaGCTACCAGTAATGCCCTAT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSDPQFS*LPVMPY
Trigger: ATAGGGCATTACTGGTAGGCAGGAAAACTGAGGGTC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTAGCTTCGGCGTGCTCTaGAAAAGCAATTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSFGVL*KSNSGR
Trigger: CCTTCCAGAATTGCTTTTCCAGAGCACGCCGAAGCT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGTGGACAGGAGGTTTATaGTGGACAGGGAGACAAGCG +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEWTGGL*WTGRQA
Trigger: CGCTTGTCTCCCTGTCCACCATAAACCTCCTGTCCA...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTCCTTGAGGAAAAATaGCTTCTGGCACCTAGGGTT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLLEEK*LLAPRV
Trigger: AACCCTAGGTGCCAGAAGCCATTTTTCCTCAAGGAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTCCTTGAGGAAAAATaGCTTCTGGCACCTAGGGTT +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKLLEEK*LLAPRV
Trigger: AACCCTAGGTGCCAGAAGCCATTTTTCCTCAAGGAG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAAATGTTGATGTCCACTaGCCCTGGGCAGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQNVDVH*PWAAKP
Trigger: TGGTTTTGCTGCCCAGGGCCAGTGGACATCAACATT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCACTGGTCGCATGGGCTaGTCTGCAGTAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSITGRMG*SAVGPW
Trigger: CCATGGTCCTACTGCAGACCAGCCCATGCGACCAGT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGAGGCTGAGCAGGCATTaGCAGAGTCATTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLRLSRH*QSHSCC
Trigger: ACAACAAGAATGACTCTGCCAATGCCTGCTCAGCCT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGCACCTTGGAGGCTGTaGCACATGATGCATAACCTT +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQAPWRL*HMMHNL
Trigger: AAGGTTATGCATCATGTGCCACAGCCTCCAAGGTGC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGAAGAACTGGGCATTTTaGGCACTGACATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLKNWAF*ALTSRT
Trigger: AGTCCTGGATGTCAGTGCCCAAAATGCCCAGTTCTT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTCAGCAGCTTTTCCTaGAAGAACTGGGCATTTTGG +
Preference number: 4 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKLSSFS*KNWAFW
Trigger: CCAAAATGCCCAGTTCTTCCAGGAAAAGCTGCTGAG...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGAGAACCTTCCAGAGTTaGACATCTAGCGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPERTFQS*TSSAVG
Trigger: GCCCACAGCGCTAGATGTCCAACTCTGGAAGGTTCT...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGATGCACAGCTCTTTGTaGTCAAAACCCTACCTTCCT +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRMHSSL*SKPYLP
Trigger: AGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCAT...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCTCTCAAGTCCATTTTaGGTGACAGCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLLSSPF*VTALSP
Trigger: AGGAGACAGAGCTGTCACCCAAAATGGACTTGAGAG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAGGCTGAGTAGGCTCTaGGCTGGGTGGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNRLSRL*AGWGEA
Trigger: AGCCTCTCCCCACCCAGCCCAGAGCCTACTCAGCCT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCTAACAAGGGCCTTTTaGCATGTCCATAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLTRAF*HVHNSN
Trigger: GTTGCTGTTATGGACATGCCAAAAGGCCCTTGTTAG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAAGGTTAGATCATCCTaGTCCTGGCCTTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLKVRSS*SWPFLK
Trigger: CTTCAGGAAAGGCCAGGACCAGGATGATCTAACCTT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAACTGGTCCTGCTAGCTaGCATGTTTCACCAACTTTT +
Preference number: 4 (lower is better)
Translates to: HLALWADLTWLPAFRFQETGPAS*HVSPTF
Trigger: AAAAGTTGGTGAAACATGCCAGCTAGCAGGACCAGT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGCAATATCCGATATCTaGTTCTTGCTGATGTCTATT +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQAAISDI*FLLMSI
Trigger: AATAGACATCAGCAAGAATCAGATATCGGATATTGC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCGGTTGGGCAACTTCTTaGAGATGCCAGTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIGWATS*RCQWPP
Trigger: TGGAGGCCACTGGCATCTTCAAGAAGTTGCCCAACC...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGGTGAGACATGTTACTaGAGGTGTAATTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPGETCY*RCNWSA
Trigger: TGCTGACCAATTACACCTTCAGTAACATGTCTCACC...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGACCAGCTCCACACTGTaGAACTGCCCATCATTCACT +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPETSSTL*NCPSFT
Trigger: AGTGAATGATGGGCAGTTTCACAGTGTGGAGCTGGT...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGTGTGTTTCTTTCCCATaGGAAGCAGGATGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRCVSFP*EAGWFS
Trigger: ACTAAACCATCCTGCTTCTCATGGGAAAGAAACACA...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCTTGAGATGGCAGGCTaGGTAGGCTCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNLEMAG*VGSGLG
Trigger: ACCCAGCCCAGAGCCTACTCAGCCTGCCATCTCAAG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCAGGGCTTCCAAACTTaGGGGAGAAGGCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCQGFQT*GRRLKI
Trigger: AATTTTGAGCCTTCTCCCTCAAGTTTGGAAGCCCTG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCAGGAGCAAATTAACTaGACTCTTCCTGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCQEQIN*TLPASW
Trigger: CCATGAGGCAGGAAGAGTTCAGTTAATTTGCTCCTG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGAGCAAAGGCAGTGGGTaGCTGCTTGACTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPESKGSG*LLDFRV
Trigger: AACCCTAAAGTCAAGCAGTCACCCACTGCCTTTGCT...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTTCCTTTGGCACTGTTaGGCCCACACTACAAAACAT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSFLWHC*AHTTKH
Trigger: ATGTTTTGTAGTGTGGGCTCAACAGTGCCAAAGGAA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATGGTTGTTGTCCAGTTaGAGGTTCTTCACATCGGTG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQWLLSS*RFFTSV
Trigger: CACCGATGTGAAGAACCTGCAACTGGACAACAACCA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCTGTTATTGCTGCACGTaGAGGGCGAAGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSICYCCT*RAKGRR
Trigger: TCTCCTGCCCTTCGCCCTGCACGTGCAGCAATAACA...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTCCATACAGGTGCACTaGTCCGGGCAGCGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLSIQVH*SGQRGL
Trigger: GAGCCCGCGCTGCCCGGAGCAGTGCACCTGTATGGA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAAAAACCAGAGTACTTTaGACTGGAAGCGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQKTRVL*TGSGGL
Trigger: CAACCCACCGCTTCCAGTGCAAAGTACTCTGGTTTT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR GCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATCGCATGGGCTGGTCTaGAGTAGGACCATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGESHGLV*SRTMGG
Trigger: CCCACCCATGGTCCTACTGCAGACCAGCCCATGCGA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGCGCCTGAATCACCTGTaGTCACCCATTCTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPERLNHL*SPILEE
Trigger: TTCCTCTAGAATGGGTGAGCACAGGTGATTCAGGCG...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCTGGCCATATCTCATTaGTTTTTAAAAGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLAISH*FLKGHS
Trigger: GGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTTCCATACTGGGGAAGTaGCACTATAACATTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRASILGK*HYNIVL
Trigger: TAAAACAATGTTATAGTGGCACTTCCCCAGTATGGA...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATCCATACTGGGGAAGTaGCACTATAACATTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VPHGCPNSIKLESERWQASILGK*HYNIVL
Trigger: TAAAACAATGTTATAGTGGCACTTCCCCAGTATGGA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTTCCTCGGGATCCCCTaGATCTGGTTTTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCFLGIP*IWFSLK
Trigger: TTTGAGTGAAAACCAGATCCAGGGGATCCCGAGGAA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCACACAAATGGGTTTTaGGCTAAGTGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSHTNGF*AKWSVW
Trigger: CCAGACACTCCACTTAGCCCAAAACCCATTTGTGTG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCGGCACGGCTGTTAGGTaGTTTCCTTCCAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIGTAVR*FPSRYS
Trigger: GCTGTACCTGGAAGGAAACCACCTAACAGCCGTGCC...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGTATTCTTGCACGGGCTaGAGAGGCAGGCATTGCATT +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEYSCTG*RGRHCI
Trigger: AATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATA...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACAGCTCAGGCACACAGTaGTCAATCACCTCGTCGCAT +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYSSGTQ*SITSSH
Trigger: ATGCGACGAGGTGATTGACCACTGTGTGCCTGAGCT...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCTGGGGTCGGACCTTaGCGGAGGCCAGTTCCACGT +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLPGVGP*RRPVPR
Trigger: ACGTGGAACTGGCCTCCGCCAAGGTCCGACCCCAGG...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCTCAGCAGCTTTTCCTaGAAGAACTGGGCATTTTGG +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCLSSFS*KNWAFW
Trigger: CCAAAATGCCCAGTTCTTCCAGGAAAAGCTGCTGAG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGTCTGGACTTCTGGTCTaGCTCCTCCACTTATCTGGT +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPESGLLV*LLHLSG
Trigger: ACCAGATAAGTGGAGGAGCCAGACCAGAAGTCCAGA...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCGTGGGGATGGGGAAATaGAGGTTGGGAAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIVGMGK*RLGRVL
Trigger: CAACACCCTTCCCAACCTCCATTTCCCCATCCCCAC...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTCCAGCTCTGGTATCTaGGATCTTGAGTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYSSSGI*DLESEG
Trigger: CCCCTCAGACTCAAGATCCCAGATACCAGAGCTGGA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGAACTTTGGCCTGGGTaGACACATGGGGTTAATTAT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSELWPG*THGVNY
Trigger: ATAATTAACCCCATGTGTCCACCCAGGCCAAAGTTC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGACTGGTCCTGCTAGCTaGCATGTTTCACCAACTTTT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLTGPAS*HVSPTF
Trigger: AAAAGTTGGTGAAACATGCCAGCTAGCAGGACCAGT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 72 bp GGGCTTCTGCTCCCAGCAAAGGCAGTGGGTGACTGCTaGACTTTAGGGTTCAGTCTGGCAATAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GLLLPAKAVGDC*TLGFSLAIALF
Trigger: AAACAAAGCTATTGCCAGACTGAACCCTAAAGTCAAGCAGTCACCCACTGCCTTTGCTGGGAGCAGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGGTGAGACATGTTACTaGAGGTGTAATTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSGETCY*RCNWSA
Trigger: TGCTGACCAATTACACCTTCAGTAACATGTCTCACC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACACAGTCATCTGGGTTaGTCTCACACCGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEHSHLG*SHTAAP
Trigger: AGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACCTGCAGCTCGTTGTTaGTGCGCACCTCATGGATGC +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEPAARC*CAPHGC
Trigger: GCATCCATGAGGTGCGCATCAACAACGAGCTGCAGG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCGGGCATTTTGGGCACTaGCATCCAGGACTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIGHFGH*HPGLRK
Trigger: TTTTCGGAGTCCTGGATGTCAGTGCCCAAAATGCCC...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTGTGTTTCTTTCCCATaGGAAGCAGGATGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSCVSFP*EAGWFS
Trigger: ACTAAACCATCCTGCTTCTCATGGGAAAGAAACACA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATTGCCACACAAACACTaGACCACACTTTTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLPHKH*TTLFQE
Trigger: CTCCTGAAAAAGTGTGGTTCAGTGTTTGTGTGGCAA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCCACGATGTTATTGCTaGACGTGCAGGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNPRCYC*TCRAKG
Trigger: GCCCTTCGCCCTGCACGTGCAGCAATAACATCGTGG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTGGCACAGGCCGTGCTTaGACACGGTGCAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLGTGRA*TRCRTC
Trigger: GCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCC...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTAACCAGAGCTTGTCTTaGTCTTCCCTTCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCNQSLS*SSLPQT
Trigger: TGTTTGAGGAAGGGAAGAGCAAGACAAGCTCTGGTT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGTCTTTCAGGCCTTTATaGTGCCACAGCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPESFRPL*CHSSLP
Trigger: AGGAAGAGAGCTGTGGCAGCATAAAGGCCTGAAAGA...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGCACAAAACCACACTATaGCCTCTGCTTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEHKTTL*PLLPHH
Trigger: ATGATGGGGAAGCAGAGGGCATAGTGTGGTTTTGTG...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCTGGAAAAGCAATTCTaGAAGGACTTGCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLEKQF*KDLQLI
Trigger: AATAAGCTGCAAGTCCTTCCAGAATTGCTTTTCCAG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATGCTAAGTGGAGTGTCTaGATGGACTGCAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNAKWSV*MDCRGA
Trigger: CGCCCCTCTGCAGTCCATCCAGACACTCCACTTAGC...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGCACACAAATGGGTTTTaGGCTAAGTGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEHTNGF*AKWSVW
Trigger: CCAGACACTCCACTTAGCCCAAAACCCATTTGTGTG...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCAGCGCGGGCTCAGCTaGCAGCTACTCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLQRGLS*QLLSSL
Trigger: CAACGAGGAGAGTAGCTGCCAGCTGAGCCCGCGCTG...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAACTGGTCGCATGGGCTaGTCTGCAGTAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGETGRMG*SAVGPW
Trigger: CCATGGTCCTACTGCAGACCAGCCCATGCGACCAGT...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTAGGGAGATGTTGGCCTaGGGTCGGACCTTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLREMLA*GRTLAE
Trigger: CTCCGCCAAGGTCCGACCCCAGGCCAACATCTCCCT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCTTCCCCAGGCTCTTTaGAGTTCCTTTGTCCACTAC +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYLPQAL*SSFVHY
Trigger: GTAGTGGACAAAGGAACTCCAAAGAGCCTGGGGAAG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAGTTTGGATATGCATTaGAAAGTGTCACAGATGGGC +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLSLDMH*KVSQMG
Trigger: GCCCATCTGTGACACTTTCCAATGCATATCCAAACT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTTTATTTATTCCATACTaGGGAAGTGCCACTATAACA +
Preference number: 4 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRALFIPY*GSATIT
Trigger: TGTTATAGTGGCACTTCCCCAGTATGGAATAAATAA...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 72 bp TCTCCCTTCATTATTCCCTGCGTCTTTGGCCCACCATaGGTACTCACAGATCAACTAGGCTCCTCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: SPFIIPCVFGPP*VLTDQLGSSRE
Trigger: TTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAAGACGCAGGGAATAATGAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAGACTCGGAGGTTCTTaGGCCCAGCGAAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNRLGGS*AQRSPS
Trigger: AGATGGACTTCGCTGGGCTCAAGAACCTCCGAGTCT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATCTGGATGCAGGTGTTaGTGGGCACAGTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGESGCRC*WAQCSP
Trigger: AGGACTGCACTGTGCCCATCAACACCTGCATCCAGA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCACACTTGCACATGTATaGGGTCCCAGTTGCCACACA +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSITLAHV*GPSCHT
Trigger: TGTGTGGCAACTGGGACCTCATACATGTGCAAGTGT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAGTGACACTTGAAGGCTaGGCAGGCATTGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEVTLEG*AGIGRV
Trigger: GACTCTGCCAATGCCTGCTCAGCCTTCAAGTGTCAC...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTGGGATACATTCCAATaGAAAATTACCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLWDTFQ*KITWKE
Trigger: CTCCTTCCAGGTAATTTTTCATTGGAATGTATCCCA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCTGCCACCCTAGATTTTaGCTCTTCCCCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSICHPRF*LFPKQA
Trigger: GGCTTGTTTGGGGAAGAGTCAAAATCTAGGGTGGCA...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGAATTCTGGAAGGACTTaGAGCTTATTCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLNSGRT*SLFLFR
Trigger: CCTGAACAAGAATAAGCTGCAAGTCCTTCCAGAATT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCGCGGAGCCCCTTGTTaGTGCATCGCACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLRGAPC*CIAPLS
Trigger: AGACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCG...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAGGGCCTTGAAGTCCTaGAGCTCGTTGTTGATGCGC +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNRALKS*SSLLMR
Trigger: GCGCATCAACAACGAGCTGCAGGACTTCAAGGCCCT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAAGCCCTCGGCACACTTaGACATGTATGAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGESPRHT*TCMRSQ
Trigger: CTGGGACCTCATACATGTGCAAGTGTGCCGAGGGCT...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCTACCCCATTTCTCTCTaGTCCTCAGTGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIYPISL*SSVCFP
Trigger: TGGGAAGCACACTGAGGAGCAGAGAGAAATGGGGTA...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTTTCTAGAATGTGACTaGTCAAGGAGAGAGCGTTTT +
Preference number: 4 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPFLECD*SRRERF
Trigger: AAAACGCTCTCTCCTTGAGCAGTCACATTCTAGAAA...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAACATATTCAGGGAGGTaGCTTGGGATGCGGACCAGC +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGETYSGR*LGMRTS
Trigger: GCTGGTCCGCATCCCAAGCCACCTCCCTGAATATGT...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAGTTCCCAGCGCCAGATaGGAAAGAGATGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEVPSAR*ERDVRS
Trigger: CGACCTCACATCTCTTTCCCATCTGGCGCTGGGAAC...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCGTTGTCCTTGTCAGTaGCCACCTGCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNRCPCQ*PPAGRC
Trigger: ACATCTCCCTGCAGGTGGCCACTGACAAGGACAACG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACCACACTGTACACTGTaGTTGGAGGGGAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEPHCTL*LEGNSG
Trigger: GCCTGAGTTCCCCTCCAACCACAGTGTACAGTGTGG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATGGACATCTAGCGCTGTaGGCAGACTTGACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNGHLAL*ADLTWL
Trigger: GAGCCAAGTCAAGTCTGCCCACAGCGCTAGATGTCC...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACGGAAAGTGTCACAGATaGGCAAGGAGTCTCTATCGT +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYGKCHR*ARSLYR
Trigger: ACGATAGAGACTCCTTGCCCATCTGTGACACTTTCC...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAAGTTTGGATATGCATTaGAAAGTGTCACAGATGGGC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQSLDMH*KVSQMG
Trigger: GCCCATCTGTGACACTTTCCAATGCATATCCAAACT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAAGTCCCCTTCAGGAATaGAGGCAGAGGCTGGATAGG +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGESPLQE*RQRLDR
Trigger: CCTATCCAGCCTCTGCCTCCATTCCTGAAGGGGACT...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCAGAAGTTCCCTCCTCTaGACAGCCACTTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIRSSLL*TATSIA
Trigger: AGCAATGGAAGTGGCTGTCCAGAGGAGGGAACTTCT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACAAGGTTAGATCATCCTaGTCCTGGCCTTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYKVRSS*SWPFLK
Trigger: CTTCAGGAAAGGCCAGGACCAGGATGATCTAACCTT...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTGCTTCCCCATCATGTaGGGACCATCTGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNCFPIM*GPSAWT
Trigger: TGTCCAGGCAGATGGTCCCCACATGATGGGGAAGCA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAGGGCATTTTGGGCACTaGCATCCAGGACTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEGHFGH*HPGLRK
Trigger: TTTTCGGAGTCCTGGATGTCAGTGCCCAAAATGCCC...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATGCTTCCAAGAAGGGCTaGCTACCTTCTCTACTGGGA +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNASKKG*LPSLLG
Trigger: TCCCAGTAGAGAAGGTAGTCAGCCCTTCTTGGAAGC...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTTGAAGCATCAGACTTaGGTTCCTTGCTATGAGATT +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCLKHQT*VPCYEI
Trigger: AATCTCATAGCAAGGAACTCAAGTCTGATGCTTCAA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTAGGAGAGAGGGCCAGTaGATGGGTCCTGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLRREGQ*MGPEET
Trigger: TGTCTCCTCAGGACCCATGCACTGGCCCTCTCTCCT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGGTAAAGTTTGGATATaGATTGGAAAGTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLGKVWI*IGKCHR
Trigger: TCTGTGACACTTTCCAATGCATATCCAAACTTTACC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAGTTATCCCTCTTCTTaGCCTTCTTCTCATCTTTTT +
Preference number: 4 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLSYPSS*PSSHLF
Trigger: AAAAAGATGAGAAGAAGGGCAAGAAGAGGGATAACT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCATGTGGGGACCATCTaGCTGGACATCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLHVGTI*LDIHCG
Trigger: CCCACAGTGGATGTCCAGGCAGATGGTCCCCACATG...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTGGAAAAGCAATTCTaGAAGGACTTGCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLEKQF*KDLQLI
Trigger: AATAAGCTGCAAGTCCTTCCAGAATTGCTTTTCCAG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTTCAGGGAGGTGGCTTaGGATGCGGACCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLFREVA*DADQLL
Trigger: CAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTGGACAGGAGGTTTATaGTGGACAGGGAGACAAGCG +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNWTGGL*WTGRQA
Trigger: CGCTTGTCTCCCTGTCCACCATAAACCTCCTGTCCA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCAGCTCAGGATCAGAGTaGAGAGGTGAGACATGTTAC +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSISSGSE*RGETCY
Trigger: GTAACATGTCTCACCTCTCCACTCTGATCCTGAGCT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCTGAAACTCCTACAGTaGAAGCTCCTGGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNLKLLQ*KLLGEG
Trigger: TCCTTCCCCCAGGAGCTTCCACTGTAGGAGTTTCAG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTCCAGCTCTGGTATCTaGGATCTTGAGTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNSSSGI*DLESEG
Trigger: CCCCTCAGACTCAAGATCCCAGATACCAGAGCTGGA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATTATCTGTGTGTCTTTaGTCTATGATCACCGCATTC +
Preference number: 4 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLSVCL*SMITAF
Trigger: GAATGCGGTGATCATAGACCAAAGACACACAGATAA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTGGAGGCTGTGGCACATaGTGCATAACCTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLGGCGT*CITFLA
Trigger: CGCCAGAAAGGTTATGCATCATGTGCCACAGCCTCC...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACCAAACTCTTCTCCCTaGAACTCCTACAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEPNSSP*NSYSGS
Trigger: GCTTCCACTGTAGGAGTTTCAGGGAGAAGAGTTTGG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATTTTGCTGTCTTGGTTaGTGGGGGCTGGATTCAGGA +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEFCCLG*WGLDSG
Trigger: TCCTGAATCCAGCCCCCATCAACCAAGACAGCAAAA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAGTACGGCCCCTTGGCTaGGTTGAAGAGAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEVRPLG*VEENFF
Trigger: AAAGAAGTTCTCTTCAACTCAGCCAAGGGGCCGTAC...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGTTGAAGCATCAGACTTaGGTTCCTTGCTATGAGATT +
Preference number: 4 (lower is better)
Translates to: FGPPLVLTDQLGSSREPELKHQT*VPCYEI
Trigger: AATCTCATAGCAAGGAACTCAAGTCTGATGCTTCAA...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTAGATGGAGTTGGCATTaGAGGATGGGGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLRWSWH*RMGAPS
Trigger: ACTCGGAGCCCCCATCCTGCAATGCCAACTCCATCT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATACCCCATTTCTCTCTaGTCCTCAGTGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEYPISL*SSVCFP
Trigger: TGGGAAGCACACTGAGGAGCAGAGAGAAATGGGGTA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAGCTTCGGCGTGCTCTaGAAAAGCAATTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNSFGVL*KSNSGR
Trigger: CCTTCCAGAATTGCTTTTCCAGAGCACGCCGAAGCT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTACAGGTGGTTGGAGTaGAGGCGCAGAGTTCGGATC +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLYRWLE*RRRVRI
Trigger: GATCCGAACTCTGCGCCTCCACTCCAACCACCTGTA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAGAAATGTCATTGCCATaGAGGGTTAGCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEEMSLP*RVSTRR
Trigger: CCTGCGAGTGCTAACCCTCCATGGCAATGACATTTC...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTATTCTTGCACGGGCTaGAGAGGCAGGCATTGCATT +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNYSCTG*RGRHCI
Trigger: AATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATTGGGTCTGGACTTCTaGTCTGGCTCCTCCACTTAT +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGELGLDF*SGSSTY
Trigger: ATAAGTGGAGGAGCCAGACCAGAAGTCCAGACCCAA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACCTGGACATCCACTGTaGGGTAGCAGGAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEPGHPL*GSRKNF
Trigger: AAAGTTCTTCCTGCTACCCCACAGTGGATGTCCAGG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTCATTTCCTTCATGCTaGATCACCAGGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLSFPSC*ITRGSH
Trigger: GTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCGACAGCCACTTCCATTaGTTGTATTGCCACTTAAGA +
Preference number: 4 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIDSHFH*LYCHLR
Trigger: TCTTAAGTGGCAATACAAGCAATGGAAGTGGCTGTC...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTCTTTCAGGCCTTTATaGTGCCACAGCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNSFRPL*CHSSLP
Trigger: AGGAAGAGAGCTGTGGCAGCATAAAGGCCTGAAAGA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAGCTCAGGATCAGAGTaGAGAGGTGAGACATGTTAC +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNSSGSE*RGETCY
Trigger: GTAACATGTCTCACCTCTCCACTCTGATCCTGAGCT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTATAAGGGACAGACCTaGCCCTTTTGCTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNYKGQT*PFCCLG
Trigger: ACCAAGACAGCAAAAGGGCCAGGTCTGTCCCTTATA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTTATTTATTCCATACTaGGGAAGTGCCACTATAACA +
Preference number: 4 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCLFIPY*GSATIT
Trigger: TGTTATAGTGGCACTTCCCCAGTATGGAATAAATAA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 72 bp GACTGCTTGACTTTAGGGTTCAGTCTGGCAATAGCTTaGTTTCTGGTGAAGGGAAAGGTTAGATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: DCLTLGFSLAIA*FLVKGKVRSSW
Trigger: CCAGGATGATCTAACCTTTCCCTTCACCAGAAACAAAGCTATTGCCAGACTGAACCCTAAAGTCAAGCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 72 bp GTGTGTCTTTGGTCTATGATCACCGCATTCTTCCATTaGTTCGACCCTCAGTTTTCCTGCCTACCAGTAATG +
Preference number: 4 (lower is better)
Translates to: VCLWSMITAFFH*FDPQFSCLPVM
Trigger: CATTACTGGTAGGCAGGAAAACTGAGGGTCGAACAAATGGAAGAATGCGGTGATCATAGACCAAAGACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAGGACAGCAATATTTTTaGGTGGCAGTGAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEGQQYF*VAVRLR
Trigger: TCTCAGTCTCACTGCCACTCAAAAATATTGCTGTCC...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTACCATAGACATTTGTaGTCCATCTGGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLYHRHL*SIWPAV
Trigger: CACTGCCGGCCAGATGGATCACAAATGTCTATGGTA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTACGTACTCCTTCTTCTaGACATCCGCCACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLTYSFF*TSATLK
Trigger: CTTCAACGTGGCGGATGTGCAGAAGAAGGAGTACGT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAGAACTTTGGCCTGGGTaGACACATGGGGTTAATTAT +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEELWPG*THGVNY
Trigger: ATAATTAACCCCATGTGTCCACCCAGGCCAAAGTTC...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 72 bp CTGGGTGGACACATGGGGTTAATTATCTGTGTGTCTTaGGTCTATGATCACCGCATTCTTCCATTTGTTCGA +
Preference number: 4 (lower is better)
Translates to: LGGHMGLIICVS*VYDHRILPFVR
Trigger: TCGAACAAATGGAAGAATGCGGTGATCATAGACCAAAGACACACAGATAATTAACCCCATGTGTCCACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTAATTGGTCAGCATGCTaGTGCTGTTGTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLNWSAC*CCCCSG
Trigger: ACCTGAGCAACAACAGCATCAGCATGCTGACCAATT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCTTTGTAGAGAAGGATaGCGTTGTCCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLLCREG*RCPCQW
Trigger: CCACTGACAAGGACAACGGCATCCTTCTCTACAAAG...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTGGCCCAGTTTAGCATaGACAGCTCTTTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLWPSLA*TALCGQ
Trigger: TTGACCACAAAGAGCTGTGCATGCTAAACTGGGCCA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTAAGGCAGTGGGTGACTaGTTGACTTTAGGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLKAVGD*LTLGFS
Trigger: ACTGAACCCTAAAGTCAAGCAGTCACCCACTGCCTT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATGCAAGCTTTGCCAAATaGCTGATTATGCCTTTACTG +
Preference number: 4 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNASFAK*LIMPLL
Trigger: CAGTAAAGGCATAATCAGGCATTTGGCAAAGCTTGC...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 72 bp TGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTaGAGGGAGAAGGCTCAAAATTATAAGGGACAGACC +
Preference number: 4 (lower is better)
Translates to: CIWHFLKSGLPN*REKAQNYKGQT
Trigger: GGTCTGTCCCTTATAATTTTGAGCCTTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATTATCTGTGTGTCTTTaGTCTATGATCACCGCATTC +
Preference number: 4 (lower is better)
Translates to: WSLHLAFLKVRASKLEGELSVCL*SMITAF
Trigger: GAATGCGGTGATCATAGACCAAAGACACACAGATAA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR GCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTGACAGCCACTTCCATTaGTTGTATTGCCACTTAAGA +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLDSHFH*LYCHLR
Trigger: TCTTAAGTGGCAATACAAGCAATGGAAGTGGCTGTC...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTCAATGAGCAGCTCTTaGTCTACTGCCGACATAATA +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLSMSSS*STADII
Trigger: TATTATGTCGGCAGTAGACCAAGAGCTGCTCATTGA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR TCA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTGCAATATCCGATATCTaGTTCTTGCTGATGTCTATT +
Preference number: 4 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLAISDI*FLLMSI
Trigger: AATAGACATCAGCAAGAATCAGATATCGGATATTGC...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
3UTR CAA 72 bp CCACTTCCATTGCTTGTATTGCCACTTAAGAGCTCCTaGTGTAATAAGGCAATTGTCCATTTTTATGACTGT +
Preference number: 4 (lower is better)
Translates to: PLPLLVLPLKSS*CNKAIVHFYDC
Trigger: ACAGTCATAAAAATGGACAATTGCCTTATTACACAAGGAGCTCTTAAGTGGCAATACAAGCAATGGAAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp AAGACGCGTGGAGCCCGAGGAGGCGCGCGGGGAGCGCGGGCGGCCTaGGGAGCGGGCGGCGGAGTTAGCGCGGAGGAGGGGCGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: KTRGARGGARGARAA*GAGGGVSAEEGRAR
Trigger: CCGAGCTCGCCCCTCCTCCGCGCTAACTCCGCCGCCCGCTCCCCAGGCCGCCCGCGCTCCCCGCGCGCCTCCTCGGGCTCCACGCGTCTT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS GCA 90 bp GGGCCGGCGGCCCAGGCCACCCGAGCGCCTGTCCCTCCACCCCCTTaGAGGCGCTGCTGGTCCCCGCCAGGAGCTCGTGCAGAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GPAAQATRAPVPPPP*RRCWSPPGARAEPA
Trigger: GGCTGGCTCTGCACGAGCTCCTGGCGGGGACCAGCAGCGCCTGCAAGGGGGTGGAGGGACAGGCGCTCGGGTGGCCTGGGCCGCCGGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521150.1
CDS CCA 90 bp GCAGGGGTCCCGGGCCTCCTGATCGCAGAGTGGGCCGGTCCAGCCTaGGCGGCACTCGCACACCACGCTGTCCTTCTCCACGGAGCGGCA +
Preference number: 5 (lower is better)
Translates to: AGVPGLLIAEWAGPA*AALAHHAVLLHGAA
Trigger: TGCCGCTCCGTGGAGAAGGACAGCGTGGTGTGCGAGTGCCGCCCAGGCTGGACCGGCCCACTCTGCGATCAGGAGGCCCGGGACCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp GCATCTGTGGCCGAGGCAGGGGTCCCGGGCCTCCTGATCGCAGAGTaGGCCGGTCCAGCCTGGGCGGCACTCGCACACCACGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: ASVAEAGVPGLLIAE*AGPAWAALAHHAVL
Trigger: AAGGACAGCGTGGTGTGCGAGTGCCGCCCAGGCTGGACCGGCCCACTCTGCGATCAGGAGGCCCGGGACCCCTGCCTCGGCCACAGATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp TTTCCATGGTGGCATCTGTGGCCGAGGCAGGGGTCCCGGGCCTCCTaGTCGCAGAGTGGGCCGGTCCAGCCTGGGCGGCACTCGCACACC +
Preference number: 5 (lower is better)
Translates to: FPWWHLWPRQGSRAS*SQSGPVQPGRHSHT
Trigger: GGTGTGCGAGTGCCGCCCAGGCTGGACCGGCCCACTCTGCGATCAGGAGGCCCGGGACCCCTGCCTCGGCCACAGATGCCACCATGGAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp CATCTGGGGCCGGCGAAGCCTGGTGGGCAGCGGCAGGTGGGCTCCTaGTGCACCACGATGCACTGGGCCCCGTTCTGGCACTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: HLGPAKPGGQRQVGS*CTTMHWAPFWHSYW
Trigger: CCAGTACGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCACCAGGCTTCGCCGGCCCCAGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS GCA 90 bp CCCTCCACCCCCTTGCAGGCGCTGCTGGTCCCCGCCAGGAGCTCGTaGAGAGCCAGCCTGTCTGCCACGCTGCTCCGTCTCTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: PSTPLQALLVPARSS*RASLSATLLRLSSL
Trigger: CAGAGAGGAGAGACGGAGCAGCGTGGCAGACAGGCTGGCTCTGCACGAGCTCCTGGCGGGGACCAGCAGCGCCTGCAAGGGGGTGGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521150.1
CDS GCA 90 bp CGAAGCCTGGTGGGCAGCGGCAGGTGGGCTCCTGCTGCACCACGATaGACTGGGCCCCGTTCTGGCACTCGTACTGGTCGCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RSLVGSGRWAPAAPR*TGPRSGTRTGRMGW
Trigger: CCAGCCCATGCGACCAGTACGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCACCAGGCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS CCA 90 bp CCTGGTGGGCAGCGGCAGGTGGGCTCCTGCTGCACCACGATGCACTaGGCCCCGTTCTGGCACTCGTACTGGTCGCATGGGCTGGTCTGC +
Preference number: 5 (lower is better)
Translates to: PGGQRQVGSCCTTMH*APFWHSYWSHGLVC
Trigger: GCAGACCAGCCCATGCGACCAGTACGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS GCA 90 bp GCAGGAGCCTGTCAGCCATGGGCTCAGGGCTACTGCAGCGGGCGATaGCAGGCTCCTTGTACCCCGCCTTCACCCACTCCGACAGCCACC +
Preference number: 5 (lower is better)
Translates to: AGACQPWAQGYCSGR*QAPCTPPSPTPTAT
Trigger: GGTGGCTGTCGGAGTGGGTGAAGGCGGGGTACAAGGAGCCTGGCATCGCCCGCTGCAGTAGCCCTGAGCCCATGGCTGACAGGCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp TCATGGATGCATCCGTGGAAGCCGCCTAGAGGCCGGTCCGTGCCCTaGCGCAAGGCAGAGAGGCCGGTGGAGGTGGGGATGCCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: SWMHPWKPPRGRSVP*RKAERPVEVGMPPR
Trigger: CCTTGGAGGCATCCCCACCTCCACCGGCCTCTCTGCCTTGCGCCAGGGCACGGACCGGCCTCTAGGCGGCTTCCACGGATGCATCCATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp CGCTGTCCTTCTCCACGGAGCGGCACAGGCCGTGCTTGCACACGGTaGAGGACTTGCAGCCTGGTGACACCCCCAGGGACTGTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RCPSPRSGTGRACTR*RTCSLVTPPGTVVG
Trigger: TCCCACCACAGTCCCTGGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTCCGTGGAGAAGGACAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp CGCACACCACGCTGTCCTTCTCCACGGAGCGGCACAGGCCGTGCTTaGACACGGTGCAGGACTTGCAGCCTGGTGACACCCCCAGGGACT +
Preference number: 5 (lower is better)
Translates to: RTPRCPSPRSGTGRA*TRCRTCSLVTPPGT
Trigger: AGTCCCTGGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTCCGTGGAGAAGGACAGCGTGGTGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp CACTCGCACACCACGCTGTCCTTCTCCACGGAGCGGCACAGGCCGTaGTTGCACACGGTGCAGGACTTGCAGCCTGGTGACACCCCCAGG +
Preference number: 5 (lower is better)
Translates to: HSHTTLSFSTERHRP*LHTVQDLQPGDTPR
Trigger: CCTGGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTCCGTGGAGAAGGACAGCGTGGTGTGCGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTaGCAGGCAGGCGGGCAGGGGCTTAGGAACACGCGAGGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESER*QAGGQGLRNTRGSR
Trigger: GCGGCTGCCTCGCGTGTTCCTAAGCCCCTGCCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGCGGAGCAGGTACACTaGGTGGGGCAGGCGACGGCT +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGAEQVH*VGQATA
Trigger: AGCCGTCGCCTGCCCCACCAAGTGTACCTGCTCCGC...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGCCTGGGGTCGGACCTaGGCGGAGGCCAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAAWGRT*AEASST
Trigger: CGTGGAACTGGCCTCCGCCAAGGTCCGACCCCAGGC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp CGGCAGGTGGGCTCCTGCTGCACCACGATGCACTGGGCCCCGTTCTaGCACTCGTACTGGTCGCATGGGCTGGTCTGCAGTAGGACCATG +
Preference number: 5 (lower is better)
Translates to: RQVGSCCTTMHWAPF*HSYWSHGLVCSRTM
Trigger: CATGGTCCTACTGCAGACCAGCCCATGCGACCAGTACGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS CCA 90 bp TCCGTGCACTGGAAGACGTATTTCCGCCGCTTGCTGCGGGTGGGCTaGCAGCACTGGGGCCCACAGCCCCCACGACATTCCATGATGGGC +
Preference number: 5 (lower is better)
Translates to: SVHWKTYFRRLLRVG*QHWGPQPPRHSMMG
Trigger: GCCCATCATGGAATGTCGTGGGGGCTGTGGGCCCCAGTGCTGCCAGCCCACCCGCAGCAAGCGGCGGAAATACGTCTTCCAGTGCACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCTGGCTGATGCGCTTGTaGGCGAGTCGGCGCGGGCTG +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGWLMRL*ASRRGL
Trigger: CAGCCCGCGCCGACTCGCCAACAAGCGCATCAGCCA...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGAGGGACCGCAGCCCGTaGAAGGCGTGGACGGGGATG +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVRDRSP*KAWTGM
Trigger: CATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCCT...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGCCTGGGGTCGGACCTaGGCGGAGGCCAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQAAWGRT*AEASST
Trigger: CGTGGAACTGGCCTCCGCCAAGGTCCGACCCCAGGC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp TCACATCCTTGGGCATGCCTCTGGGGAGGGCGCGGAGCCCCTTGTTaGTGCATCGCACCACTGTCTCCATACAGGTGCACTGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: SHPWACLWGGRGAPC*CIAPLSPYRCTAPG
Trigger: GCCCGGAGCAGTGCACCTGTATGGAGACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCGCCCTCCCCAGAGGCATGCCCAAGGATGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp GAAGTTGACAGTGATGAGCTTCTCGCATCTGGGGCCGGCGAAGCCTaGTGGGCAGCGGCAGGTGGGCTCCTGCTGCACCACGATGCACTG +
Preference number: 5 (lower is better)
Translates to: EVDSDELLASGAGEA*WAAAGGLLLHHDAL
Trigger: CAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCACCAGGCTTCGCCGGCCCCAGATGCGAGAAGCTCATCACTGTCAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATCAAGGCGCTCAGCGTaGCGGGGGATGCCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQASRRSA*RGMPRG
Trigger: TCCTCGGGGCATCCCCCGCAACGCTGAGCGCCTTGA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAATCTGGCTGATGCGCTaGTTGGCGAGTCGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAIWLMR*LASRRG
Trigger: CCCGCGCCGACTCGCCAACAAGCGCATCAGCCAGAT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCGCGGAGCCCCTTGTaGCTGCATCGCACCACTGTC +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVARSPL*LHRTTV
Trigger: GACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCGC...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGCGCGGAGCCCCTTGTaGCTGCATCGCACCACTGTC +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGARSPL*LHRTTV
Trigger: GACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCGC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAGGGCGCGGAGCCCCTaGTTGCTGCATCGCACCACT +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARARSP*LLHRTT
Trigger: AGTGGTGCGATGCAGCAACAAGGGGCTCCGCGCCCT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCCCCGTGGCGGCACTaGTGGGCCACACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRAPWRH*WATQSS
Trigger: TGATGACTGTGTGGCCCACAAGTGCCGCCACGGGGC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGCCCCGTGGCGGCACTaGTGGGCCACACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGAPWRH*WATQSS
Trigger: TGATGACTGTGTGGCCCACAAGTGCCGCCACGGGGC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGACCTGCAGGGAGATGTaGGCCTGGGGTCGGACCTTG +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGTCREM*AWGRTL
Trigger: CAAGGTCCGACCCCAGGCCAACATCTCCCTGCAGGT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTATCTGGCTGATGCGCTaGTTGGCGAGTCGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAIWLMR*LASRRG
Trigger: CCCGCGCCGACTCGCCAACAAGCGCATCAGCCAGAT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTAGGGCGCGGAGCCCCTaGTTGCTGCATCGCACCACT +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGRARSP*LLHRTT
Trigger: AGTGGTGCGATGCAGCAACAAGGGGCTCCGCGCCCT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTAGGGCGCGGAGCCCCTaGTTGCTGCATCGCACCACT +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRARARSP*LLHRTT
Trigger: AGTGGTGCGATGCAGCAACAAGGGGCTCCGCGCCCT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCGATGCCAGGCTCCTaGTACCCCGCCTTCACCCAC +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGAMPGS*YPAFTH
Trigger: GTGGGTGAAGGCGGGGTACAAGGAGCCTGGCATCGC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTCGGCACAGGCCGTGCTaGCACACGGTGCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRARHRPC*HTVQDL
Trigger: CAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCG...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp TGTCATTGCCATGGAGGGTTAGCACTCGCAGGGACCGCAGCCCGTTaGAGGCGTGGACGGGGATGCACCTCAGCCGGTTGTAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CHCHGGLALAGTAAR*RRGRGCTSAGCSSG
Trigger: TCCTGAGCTACAACCGGCTGAGGTGCATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCCTGCGAGTGCTAACCCTCCATGGCAATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTCGCAGTACAGGTGGTaGGAGTGGAGGCGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGSQYRW*EWRRRV
Trigger: AACTCTGCGCCTCCACTCCAACCACCTGTACTGCGA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGAGATGGAGTTGGCATaGCAGGATGGGGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGEMELA*QDGGSE
Trigger: CTCGGAGCCCCCATCCTGCAATGCCAACTCCATCTC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGGCAGGAGATGGAGTaGGCATTGCAGGATGGGGGC +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGGQEME*ALQDGG
Trigger: GCCCCCATCCTGCAATGCCAACTCCATCTCCTGCCC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTGGCTGATGCGCTTGTaGGCGAGTCGGCGCGGGCTG +
Preference number: 5 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQWLMRL*ASRRGL
Trigger: CAGCCCGCGCCGACTCGCCAACAAGCGCATCAGCCA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCGGACCAGCTTCTGGTaGGAGCAGTCCACAATCGTG +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGRTSFW*EQSTIV
Trigger: CACGATTGTGGACTGCTCCAACCAGAAGCTGGTCCG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGATTCAGGGAGGTGGCTaGGGATGCGGACCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGIQGGG*GCGPAS
Trigger: AGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAAT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTCACAGTCATCTGGGTaGATCTCACACCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGSQSSG*ISHRCP
Trigger: GGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGGCCTGGGGTCGGACCTaGGCGGAGGCCAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLAWGRT*AEASST
Trigger: CGTGGAACTGGCCTCCGCCAAGGTCCGACCCCAGGC...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGATGCCGTTGTCCTaGTCAGTGGCCACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGRMPLS*SVATCR
Trigger: CCTGCAGGTGGCCACTGACAAGGACAACGGCATCCT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTGTGGTGGGAGGGCCTaGAAGTCCTGCAGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVCGGRA*KSCSSL
Trigger: CAACGAGCTGCAGGACTTCAAGGCCCTCCCACCACA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCAGGCACGGATTCTCTaGTTGGCAGTGCTCGCCGCT +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGQARIL*LAVLAA
Trigger: AGCGGCGAGCACTGCCAACAAGAGAATCCGTGCCTG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTGCGCTGTGGGCAGACTaGACTTGGCTCCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAALWAD*TWLPAF
Trigger: GAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGC...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp AGCAAAACCAGAGTACTTTGCACTGGAAGCGGTGGGTTGGGGTGGTaGGCAGGAGCCTGTCAGCCATGGGCTCAGGGCTACTGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: SKTRVLCTGSGGLGW*AGACQPWAQGYCSG
Trigger: CCCGCTGCAGTAGCCCTGAGCCCATGGCTGACAGGCTCCTGCTCACCACCCCAACCCACCGCTTCCAGTGCAAAGTACTCTGGTTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS GCA 90 bp GCTCCTTGTACCCCGCCTTCACCCACTCCGACAGCCACCGAAGACTaGAGTCACAGTGGAGTGGGTTGGTTCCCAGCGCCAGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: APCTPPSPTPTATED*SHSGVGWFPAPDGK
Trigger: TTTCCCATCTGGCGCTGGGAACCAACCCACTCCACTGTGACTGCAGTCTTCGGTGGCTGTCGGAGTGGGTGAAGGCGGGGTACAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp CTCAGCTCACTGCAGCCTCCGCCTCCCGGGTTCCAGCAACTGTCCTaGCTCAGTCTCCCAGGTAGCTGGGATTACGGATACTCACCACCA +
Preference number: 5 (lower is better)
Translates to: LSSLQPPPPGFQQLS*LSLPGSWDYGYSPP
Trigger: TGGTGGTGAGTATCCGTAATCCCAGCTACCTGGGAGACTGAGGCAGGACAGTTGCTGGAACCCGGGAGGCGGAGGCTGCAGTGAGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 90 bp GGAGGAGAGAGCGCTGCAGAGTGGGATCCCAGAGTCCGTGGGCAGTaGACCCAGGAGAACTTACATGGTGGACAGGGAGACAAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: GGESAAEWDPRVRGQ*TQENLHGGQGDKRG
Trigger: ACCACGCTTGTCTCCCTGTCCACCATGTAAGTTCTCCTGGGTCCACTGCCCACGGACTCTGGGATCCCACTCTGCAGCGCTCTCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 90 bp GGAGCTGGGAGGAGAGAGCGCTGCAGAGTGGGATCCCAGAGTCCGTaGGCAGTGGACCCAGGAGAACTTACATGGTGGACAGGGAGACAA +
Preference number: 5 (lower is better)
Translates to: GAGRRERCRVGSQSP*AVDPGELTWWTGRQ
Trigger: TTGTCTCCCTGTCCACCATGTAAGTTCTCCTGGGTCCACTGCCCACGGACTCTGGGATCCCACTCTGCAGCGCTCTCTCCTCCCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGTCAAGGCGCTCAGCGTaGCGGGGGATGCCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKSRRSA*RGMPRG
Trigger: TCCTCGGGGCATCCCCCGCAACGCTGAGCGCCTTGA...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGAAGACTCGGAGGTTCTaGAGCCCAGCGAAGTCCATC +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGKTRRF*SPAKSI
Trigger: GATGGACTTCGCTGGGCTCAAGAACCTCCGAGTCTT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTGCACATCCGCCACGTaGAAGCCCCTCAAATGCACA +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGCTSAT*KPLKCT
Trigger: TGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGCA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCGGACCAGCTTCTGGTaGGAGCAGTCCACAATCGTG +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGRTSFW*EQSTIV
Trigger: CACGATTGTGGACTGCTCCAACCAGAAGCTGGTCCG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATTCAGGGAGGTGGCTaGGGATGCGGACCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGIQGGG*GCGPAS
Trigger: AGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAAT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAGGGACCGCAGCCCGTaGAAGGCGTGGACGGGGATG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSRDRSP*KAWTGM
Trigger: CATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCCT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCATGTCCCGTTATTCTaGCACGGGCTGGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVHVPLF*HGLERQ
Trigger: CTGCCTCTCCAGCCCGTGCAAGAATAACGGGACATG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTCCTGCAGCTCGTTGTaGATGCGCACCTCATGGATG +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGSCSSL*MRTSWM
Trigger: CATCCATGAGGTGCGCATCAACAACGAGCTGCAGGA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCAGGCACGGATTCTCTaGTTGGCAGTGCTCGCCGCT +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGQARIL*LAVLAA
Trigger: AGCGGCGAGCACTGCCAACAAGAGAATCCGTGCCTG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGCACCTCTCGGACTACTaGTCCCAGGCACGGATTCTC +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRHLSDY*SQARIL
Trigger: GAGAATCCGTGCCTGGGACAAGTAGTCCGAGAGGTG...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATGTCCACTGGCCCTTaGCACTGGAAGCGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGMSTGP*HWKRWV
Trigger: AACCCACCGCTTCCAGTGCAAAGGGCCAGTGGACAT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS CCA 90 bp ACGTTGAAGCCCCTCAAATGCACAGGAGCCATGCAGAGTGTGAACTaGCCAACTGTCCGTCGCTGTCGCAGCCAATCCGAGAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: TLKPLKCTGAMQSVN*PTVRRCRSQSESQA
Trigger: GGCCTGGCTCTCGGATTGGCTGCGACAGCGACGGACAGTTGGCCAGTTCACACTCTGCATGGCTCCTGTGCATTTGAGGGGCTTCAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTGCGGAGCAGGTACACTaGGTGGGGCAGGCGACGGCT +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCAEQVH*VGQATA
Trigger: AGCCGTCGCCTGCCCCACCAAGTGTACCTGCTCCGC...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAATGCCCTCCGGCAAGTaGGCAGGAATCTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAMPSGK*AGISIK
Trigger: CTTGATGGAGATTCCTGCCAACTTGCCGGAGGGCAT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAATTCAGGGAGGTGGCTaGGGATGCGGACCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQAIQGGG*GCGPAS
Trigger: AGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAAT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCAGGGACCGCAGCCCGTaGAAGGCGTGGACGGGGATG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSRDRSP*KAWTGM
Trigger: CATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCCT...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGCGATGCCAGGCTCCTaGTACCCCGCCTTCACCCAC +
Preference number: 5 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLAMPGS*YPAFTH
Trigger: GTGGGTGAAGGCGGGGTACAAGGAGCCTGGCATCGC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGCGATGCCAGGCTCCTaGTACCCCGCCTTCACCCAC +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPAMPGS*YPAFTH
Trigger: GTGGGTGAAGGCGGGGTACAAGGAGCCTGGCATCGC...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCTGGAGAGGCAGGCATaGCATTTGGCCACAATGTTG +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGLERQA*HLATML
Trigger: CAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTTCTGGATGCAGGTGTaGATGGGCACAGTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRFWMQV*MGTVQS
Trigger: GGACTGCACTGTGCCCATCAACACCTGCATCCAGAA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGTCCACGCAGGTGGCATaGTTTTCGCAGTCGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRSTQVA*FSQSLS
Trigger: GGACAACGACTGCGAAAACAATGCCACCTGCGTGGA...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATCCACGCAGGTGGCATaGTTTTCGCAGTCGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVASTQVA*FSQSLS
Trigger: GGACAACGACTGCGAAAACAATGCCACCTGCGTGGA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATCCTGCAGCTCGTTGTaGATGCGCACCTCATGGATG +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVASCSSL*MRTSWM
Trigger: CATCCATGAGGTGCGCATCAACAACGAGCTGCAGGA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGAAGTCCTGCAGCTCGTaGTTGATGCGCACCTCATGG +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRKSCSS*LMRTSW
Trigger: CCATGAGGTGCGCATCAACAACGAGCTGCAGGACTT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCGGCACAGGCCGTGCTaGCACACGGTGCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSRHRPC*HTVQDL
Trigger: CAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGCACGGATTCTCTTGTaGGCAGTGCTCGCCGCTAAA +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGARILL*AVLAAK
Trigger: TTTAGCGGCGAGCACTGCCAACAAGAGAATCCGTGC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCACACCTCTCGGACTACTaGTCCCAGGCACGGATTCTC +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQAHLSDY*SQARIL
Trigger: GAGAATCCGTGCCTGGGACAAGTAGTCCGAGAGGTG...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTATAGTCAGTCCTCGATaGGAAGCCAGGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAIVSPR*EARASQ
Trigger: CTGGCTGGCCCTGGCTTCCAATCGAGGACTGACTAT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGGCCCTTTTGCTGTCTaGGTTGATGGGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGGPFAV*VDGGWI
Trigger: AATCCAGCCCCCATCAACCAAGACAGCAAAAGGGCC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGCCCTTTTGCTGTCTaGGTTGATGGGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRGPFAV*VDGGWI
Trigger: AATCCAGCCCCCATCAACCAAGACAGCAAAAGGGCC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCCATCGTACGGCCCCTaGGCTGAGTTGAAGAGAACT +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVPSYGP*AELKRT
Trigger: AGTTCTCTTCAACTCAGCCAAGGGGCCGTACGATGG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp TCGCAGTCGTTGTCCTCACAGTCATCTGGGTTGATCTCACACCGCTaGCCCTCAAAGCCCAGAGGGCAGGAGCAGCTGAACCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: SQSLSSQSSGLISHR*PSKPRGQEQLNPSL
Trigger: CAAGGATGGGTTCAGCTGCTCCTGCCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGAGGACAACGACTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGACTTGCAGCTTATTCTaGTTCAGGCGCAGTCGCTCT +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGTCSLF*FRRSRS
Trigger: AGAGCGACTGCGCCTGAACAAGAATAAGCTGCAAGT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGGGCAGGAGATGGAGTaGGCATTGCAGGATGGGGGC +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKGQEME*ALQDGG
Trigger: GCCCCCATCCTGCAATGCCAACTCCATCTCCTGCCC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGGGCAGGAGATGGAGTaGGCATTGCAGGATGGGGGC +
Preference number: 5 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLGQEME*ALQDGG
Trigger: GCCCCCATCCTGCAATGCCAACTCCATCTCCTGCCC...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTATGCCCTCCGGCAAGTaGGCAGGAATCTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAMPSGK*AGISIK
Trigger: CTTGATGGAGATTCCTGCCAACTTGCCGGAGGGCAT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGACAATCTCGGTGATCTaGTTCCCATACAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGTISVI*FPYRTS
Trigger: GCTGGTCCTGTATGGGAACAAGATCACCGAGATTGT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAGCTCGGTCACATCCTaGGGCATGCCTCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSSSVTS*GMPLGR
Trigger: CCTCCCCAGAGGCATGCCCAAGGATGTGACCGAGCT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGAGAGATGTGAGGTCGTaGAAGGAGCCTTCAGGAACG +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRRDVRS*KEPSGT
Trigger: CGTTCCTGAAGGCTCCTTCAACGACCTCACATCTCT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAATCACAGTGGAGTGGGTaGGTTCCCAGCGCCAGATGG +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQESQWSG*VPSARW
Trigger: CCATCTGGCGCTGGGAACCAACCCACTCCACTGTGA...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATTCTGGATGCAGGTGTaGATGGGCACAGTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQAFWMQV*MGTVQS
Trigger: GGACTGCACTGTGCCCATCAACACCTGCATCCAGAA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGACCTGCAGGGAGATGTaGGCCTGGGGTCGGACCTTG +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLTCREM*AWGRTL
Trigger: CAAGGTCCGACCCCAGGCCAACATCTCCCTGCAGGT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCTTCCCCAGGCTCTTaGGAGTTCCTTTGTCCACTA +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRASPGS*EFLCPL
Trigger: TAGTGGACAAAGGAACTCCAAAGAGCCTGGGGAAGC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTAAGTCCTGCAGCTCGTaGTTGATGCGCACCTCATGG +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAKSCSS*LMRTSW
Trigger: CCATGAGGTGCGCATCAACAACGAGCTGCAGGACTT...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCACACGGTGCAGGACTaGCAGCCTGGTGACACCCCC +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSHTVQD*QPGDTP
Trigger: GGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCGGCACAGGCCGTGCTaGCACACGGTGCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCRHRPC*HTVQDL
Trigger: CAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGCGCTGTGGGCAGACTaGACTTGGCTCCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSALWAD*TWLPAF
Trigger: GAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTTATTCCCTGCGTCTTaGGCCCACCATTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGLFPAS*AHHWYS
Trigger: TGAGTACCAATGGTGGGCCAAAGACGCAGGGAATAA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAACAGACCTGGCCCTTTaGCTGTCTTGGTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQATDLAL*LSWLMG
Trigger: CCCCATCAACCAAGACAGCAAAAGGGCCAGGTCTGT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTCCATCGTACGGCCCCTaGGCTGAGTTGAAGAGAACT +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAPSYGP*AELKRT
Trigger: AGTTCTCTTCAACTCAGCCAAGGGGCCGTACGATGG...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGCAGTGGGTGACTGCTaGACTTTAGGGTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAAVGDC*TLGFSL
Trigger: CAGACTGAACCCTAAAGTCAAGCAGTCACCCACTGC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCAGTGGGTGACTGCTaGACTTTAGGGTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRAVGDC*TLGFSL
Trigger: CAGACTGAACCCTAAAGTCAAGCAGTCACCCACTGC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCTGGTATCTGGGATCTaGAGTCTGAGGGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGLVSGI*SLRGRS
Trigger: TGACCTGCCCCTCAGACTCAAGATCCCAGATACCAG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp AGGTGGCATTGTTTTCGCAGTCGTTGTCCTCACAGTCATCTGGGTTaGTCTCACACCGCTGCCCCTCAAAGCCCAGAGGGCAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RWHCFRSRCPHSHLG*SHTAAPQSPEGRSS
Trigger: GCTGCTCCTGCCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGAGGACAACGACTGCGAAAACAATGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp GCCCCCACGACATTCCATGATGGGCACCTTGGAGGCTGTGGCACATaGTGCATAACCTTTCTGGCGGCGGATCACCTCTCGGACTACTTG +
Preference number: 5 (lower is better)
Translates to: APTTFHDGHLGGCGT*CITFLAADHLSDYL
Trigger: CAAGTAGTCCGAGAGGTGATCCGCCGCCAGAAAGGTTATGCATCATGTGCCACAGCCTCCAAGGTGCCCATCATGGAATGTCGTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp ACAGCTCCAGTGCCAGGGGGTCATTGTCTCCTTTGTAGAGAAGGATaGCGTTGTCCTTGTCAGTGGCCACCTTGGCGGAGGCCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: TAPVPGGHCLLCREG*RCPCQWPPWRRPVP
Trigger: TGGAACTGGCCTCCGCCAAGGTGGCCACTGACAAGGACAACGGCATCCTTCTCTACAAAGGAGACAATGACCCCCTGGCACTGGAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518092.1
CDS CCA 90 bp TCGGTGACATATTCAGGGAGGTGGCTTGGGATGCGGACCAGCTTCTaGTTGGAGCAGTCCACAATCGTGCCCTCACAGCGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: SVTYSGRWLGMRTSF*LEQSTIVPSQRHFS
Trigger: CGAGAAGTGTCGCTGTGAGGGCACGATTGTGGACTGCTCCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAATATGTCACCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS CCA 90 bp CACGCAGGTGGCATTGTTTTCGCAGTCGTTGTCCTCACAGTCATCTaGGTTGATCTCACACCGCTGCCCCTCAAAGCCCAGAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: HAGGIVFAVVVLTVI*VDLTPLPLKAQRAG
Trigger: TCCTGCCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGAGGACAACGACTGCGAAAACAATGCCACCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACAGCTGATGTGGTTGTaGTCCAGTTGCAGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAQLMWL*SSCRFF
Trigger: GAAGAACCTGCAACTGGACAACAACCACATCAGCTG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGGGCTCCTGCAGGGATGGCTTaGATGGAGTTCTGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: SAVGRLDLAPSLPLPRRAPAGMA*MEFCSR
Trigger: CCTAGAACAGAACTCCATCAAAGCCATCCCTGCAGG...AGCCCTTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCTCAGCATCAAGGTTTaGAGGCCACTGAGGCCACGG +
Preference number: 5 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLSIKV*RPLRPR
Trigger: CCGTGGCCTCAGTGGCCTCAAAACCTTGATGCTGAG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCAGCTCGGTCACATCCTaGGGCATGCCTCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSSSVTS*GMPLGR
Trigger: CCTCCCCAGAGGCATGCCCAAGGATGTGACCGAGCT...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGTCACAGTGGAGTGGGTaGGTTCCCAGCGCCAGATGG +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKSQWSG*VPSARW
Trigger: CCATCTGGCGCTGGGAACCAACCCACTCCACTGTGA...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCAAAACCAGAGTACTTaGCACTGGAAGCGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGQNQST*HWKRWV
Trigger: AACCCACCGCTTCCAGTGCAAAGTACTCTGGTTTTG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCTGGAGAGGCAGGCATaGCATTTGGCCACAATGTTG +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGLERQA*HLATML
Trigger: CAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCTTCCCCAGGCTCTTaGGAGTTCCTTTGTCCACTA +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGASPGS*EFLCPL
Trigger: TAGTGGACAAAGGAACTCCAAAGAGCCTGGGGAAGC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTGTGGTGGGAGGGCCTaGAAGTCCTGCAGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSCGGRA*KSCSSL
Trigger: CAACGAGCTGCAGGACTTCAAGGCCCTCCCACCACA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGCAGAGTCATTCTTGTaGTCACACAAGTCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAAESFL*SHKSPP
Trigger: TGGAGGGGACTTGTGTGACAACAAGAATGACTCTGC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCGCAGAGTCATTCTTGTaGTCACACAAGTCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGAESFL*SHKSPP
Trigger: TGGAGGGGACTTGTGTGACAACAAGAATGACTCTGC...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGAGTCATTCTTGTaGTCACACAAGTCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVAESFL*SHKSPP
Trigger: TGGAGGGGACTTGTGTGACAACAAGAATGACTCTGC...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAAGGCTGAGCAGGCATaGGCAGAGTCATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAKAEQA*AESFLL
Trigger: CAACAAGAATGACTCTGCCAATGCCTGCTCAGCCTT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGAGGTTGGGAAGGGTGTaGGGCAGATCCCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRRLGRV*GRSQDP
Trigger: AGGATCCTGGGATCTGCCCAACACCCTTCCCAACCT...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCCCCTTGGCTGAGTaGAAGAGAACTTCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQAGPLAE*KRTSFP
Trigger: GGGAAAAGAAGTTCTCTTCAACTCAGCCAAGGGGCC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCCCCTTGGCTGAGTaGAAGAGAACTTCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGGPLAE*KRTSFP
Trigger: GGGAAAAGAAGTTCTCTTCAACTCAGCCAAGGGGCC...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp TCGCAGCTGAATCCTTTGTCCAGGGGGATGCACTTGGCCTCATGCTaGCAGAGGTTCAGCTCAGGCACACAGTGGTCAATCACCTCGTCG +
Preference number: 5 (lower is better)
Translates to: SQLNPLSRGMHLASC*QRFSSGTQWSITSS
Trigger: CGACGAGGTGATTGACCACTGTGTGCCTGAGCTGAACCTCTGTCAGCATGAGGCCAAGTGCATCCCCCTGGACAAAGGATTCAGCTGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS GCA 90 bp ACGTACTCCTTCTTCTGCACATCCGCCACGTTGAAGCCCCTCAAATaGACAGGAGCCATGCAGAGTGTGAACTGGCCAACTGTCCGTCGC +
Preference number: 5 (lower is better)
Translates to: TYSFFCTSATLKPLK*TGAMQSVNWPTVRR
Trigger: GCGACGGACAGTTGGCCAGTTCACACTCTGCATGGCTCCTGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGCAGAAGAAGGAGTACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS GCA 90 bp ACAGCTCCAGTGCCAGGGGGTCATTGTCTCCTTTGTAGAGAAGGATaGCGTTGTCCTTGTCAGTGGCCACCTGCAGGGAGATGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TAPVPGGHCLLCREG*RCPCQWPPAGRCWP
Trigger: AGGCCAACATCTCCCTGCAGGTGGCCACTGACAAGGACAACGGCATCCTTCTCTACAAAGGAGACAATGACCCCCTGGCACTGGAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCCCAGCGAAGTCCATCTaGGTGATCCTGGTGATATTA +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGPAKSI*VILVIL
Trigger: TAATATCACCAGGATCACCAAGATGGACTTCGCTGG...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTATGACGCTGACCTGGTaGTCTTCCAGATGCAAGACT +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGMTLTW*SSRCKT
Trigger: AGTCTTGCATCTGGAAGACAACCAGGTCAGCGTCAT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGTGGTTGTTGTCCAGTaGCAGGTTCTTCACATCGGT +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQAVVVVQ*QVLHIG
Trigger: ACCGATGTGAAGAACCTGCAACTGGACAACAACCAC...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCGACTGATGTTGTTGTaGTTGAGGGTAAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVRLMLL*LRVRIS
Trigger: GGAGATCCTTACCCTCAACAACAACAACATCAGTCG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGATGCGACTGATGTTGTaGTTGTTGAGGGTAAGGATC +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGMRLML*LLRVRI
Trigger: GATCCTTACCCTCAACAACAACAACATCAGTCGCAT...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGATGCGACTGATGTaGTTGTTGTTGAGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGRMRLM*LLLRVR
Trigger: CCTTACCCTCAACAACAACAACATCAGTCGCATCCT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTCGCAGTACAGGTGGTaGGAGTGGAGGCGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPSQYRW*EWRRRV
Trigger: AACTCTGCGCCTCCACTCCAACCACCTGTACTGCGA...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGTCGCAGTACAGGTGGTaGGAGTGGAGGCGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKSQYRW*EWRRRV
Trigger: AACTCTGCGCCTCCACTCCAACCACCTGTACTGCGA...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGAGATGGAGTTGGCATaGCAGGATGGGGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQEMELA*QDGGSE
Trigger: CTCGGAGCCCCCATCCTGCAATGCCAACTCCATCTC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAATGCCCTCCGGCAAGTaGGCAGGAATCTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQEMPSGK*AGISIK
Trigger: CTTGATGGAGATTCCTGCCAACTTGCCGGAGGGCAT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCCATCAAACAGTCCCTaGACAATCTCGGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVPSNSP*TISVIL
Trigger: CAAGATCACCGAGATTGTCAAGGGACTGTTTGATGG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTCAGCATCAAGGTTTaGAGGCCACTGAGGCCACGG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLSIKV*RPLRPR
Trigger: CCGTGGCCTCAGTGGCCTCAAAACCTTGATGCTGAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGAGCATGCTGATGCTGTaGTTGCTCAGGTCAATAAGC +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRSMLML*LLRSIS
Trigger: GCTTATTGACCTGAGCAACAACAGCATCAGCATGCT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTACGCTGGAAATGTCATaGCCATGGAGGGTTAGCACT +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGTLEMS*PWRVST
Trigger: AGTGCTAACCCTCCATGGCAATGACATTTCCAGCGT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAACGCTGGAAATGTCATaGCCATGGAGGGTTAGCACT +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQATLEMS*PWRVST
Trigger: AGTGCTAACCCTCCATGGCAATGACATTTCCAGCGT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTCACAGTGGAGTGGGTaGGTTCCCAGCGCCAGATGG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSSQWSG*VPSARW
Trigger: CCATCTGGCGCTGGGAACCAACCCACTCCACTGTGA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCATGTCCCGTTATTCTaGCACGGGCTGGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLHVPLF*HGLERQ
Trigger: CTGCCTCTCCAGCCCGTGCAAGAATAACGGGACATG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCACAGTCATCTGGGTaGATCTCACACCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLSQSSG*ISHRCP
Trigger: GGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATTGTTTTCGCAGTCGTaGTCCTCACAGTCATCTGGG +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQALFSQS*SSQSSG
Trigger: CCCAGATGACTGTGAGGACAACGACTGCGAAAACAA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGTCCACGCAGGTGGCATaGTTTTCGCAGTCGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRSTQVA*FSQSLS
Trigger: GGACAACGACTGCGAAAACAATGCCACCTGCGTGGA...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATCTTTGCCCACGAAGTaGACAGTGATGAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQASLPTK*TVMSFS
Trigger: CGAGAAGCTCATCACTGTCAACTTCGTGGGCAAAGA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCAGGATGCCGTTGTCCTaGTCAGTGGCCACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSRMPLS*SVATCR
Trigger: CCTGCAGGTGGCCACTGACAAGGACAACGGCATCCT...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTGTGGTGGGAGGGCCTaGAAGTCCTGCAGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSCGGRA*KSCSSL
Trigger: CAACGAGCTGCAGGACTTCAAGGCCCTCCCACCACA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCACACGGTGCAGGACTaGCAGCCTGGTGACACCCCC +
Preference number: 5 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYHTVQD*QPGDTP
Trigger: GGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCATGTATGAGGTCCCAGTaGCCACACATTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVACMRSQ*PHIFHG
Trigger: ACCATGGAAAATGTGTGGCAACTGGGACCTCATACA...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTGTATGAGGTCCCAGTaGCCACACATTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVCMRSQ*PHIFHG
Trigger: ACCATGGAAAATGTGTGGCAACTGGGACCTCATACA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCTTGGCAGAGTCATTCTaGTTGTCACACAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGLAESF*LSHKSP
Trigger: AGGGGACTTGTGTGACAACAAGAATGACTCTGCCAA...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTAAGGCTGAGCAGGCATaGGCAGAGTCATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGKAEQA*AESFLL
Trigger: CAACAAGAATGACTCTGCCAATGCCTGCTCAGCCTT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACTCAATGAGCAGCTCTaGGTCTACTGCCGACATAAT +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVALNEQL*VYCRHN
Trigger: ATTATGTCGGCAGTAGACCAAGAGCTGCTCATTGAG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGGGACAGCAATATTTTaGAGTGGCAGTGAGACTGAG +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRGTAIF*SGSETE
Trigger: CTCAGTCTCACTGCCACTCAAAAATATTGCTGTCCC...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGATAGTCAGTCCTCGATaGGAAGCCAGGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLIVSPR*EARASQ
Trigger: CTGGCTGGCCCTGGCTTCCAATCGAGGACTGACTAT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGTCTTTGGCCCACCATaGGTACTCACAGATCAACTA +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAVFGPP*VLTDQL
Trigger: TAGTTGATCTGTGAGTACCAATGGTGGGCCAAAGAC...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGAGCATGCACAGCTCTTaGTGGTCAAAACCCTACCTT +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRSMHSS*WSKPYL
Trigger: AAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCT...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGCATGCACAGCTCTTaGTGGTCAAAACCCTACCTT +
Preference number: 5 (lower is better)
Translates to: GPTWLSQLHQAGVREVAGSMHSS*WSKPYL
Trigger: AAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCT...GCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAAAACCAGAGCTTGTCTaGCTCTTCCCTTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVAKPELV*LFPSSN
Trigger: GTTTGAGGAAGGGAAGAGCAAGACAAGCTCTGGTTT...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp ATTGTCATTCAGTCGCAGGTCGGTGACATATTCAGGGAGGTGGCTTaGGATGCGGACCAGCTTCTGGTTGGAGCAGTCCACAATCGTGCC +
Preference number: 5 (lower is better)
Translates to: IVIQSQVGDIFREVA*DADQLLVGAVHNRA
Trigger: GGCACGATTGTGGACTGCTCCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAATATGTCACCGACCTGCGACTGAATGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS CCA 90 bp GCTGGAGAGGCAGGCATTGCATTTGGCCACAATGTTGATGTCCACTaGCCCTGGGCAGCAAAACCAGAGTACTTTGCACTGGAAGCGGTG +
Preference number: 5 (lower is better)
Translates to: AGEAGIAFGHNVDVH*PWAAKPEYFALEAV
Trigger: CACCGCTTCCAGTGCAAAGTACTCTGGTTTTGCTGCCCAGGGCCAGTGGACATCAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS CCA 90 bp TGGGATTCTCAGGGGACGCCTTGGAGATGTGGGCTTGTCACTGGCTaGCAGTGTGTTCCTCATCTGGGAGCAAGTCCAGGGCATAAGAAT +
Preference number: 5 (lower is better)
Translates to: WDSQGTPWRCGLVTG*QCVPHLGASPGHKN
Trigger: ATTCTTATGCCCTGGACTTGCTCCCAGATGAGGAACACACTGCCAGCCAGTGACAAGCCCACATCTCCAAGGCGTCCCCTGAGAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 90 bp AGGCTGTGTGATGTAAGCACATCCTGGGATTCTCAGGGGACGCCTTaGAGATGTGGGCTTGTCACTGGCTGGCAGTGTGTTCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: RLCDVSTSWDSQGTP*RCGLVTGWQCVPHL
Trigger: CAGATGAGGAACACACTGCCAGCCAGTGACAAGCCCACATCTCCAAGGCGTCCCCTGAGAATCCCAGGATGTGCTTACATCACACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 90 bp GTCTGGTCTGGTGCAAACTCTAGGCTGTGTGATGTAAGCACATCCTaGGATTCTCAGGGGACGCCTTGGAGATGTGGGCTTGTCACTGGC +
Preference number: 5 (lower is better)
Translates to: VWSGANSRLCDVSTS*DSQGTPWRCGLVTG
Trigger: GCCAGTGACAAGCCCACATCTCCAAGGCGTCCCCTGAGAATCCCAGGATGTGCTTACATCACACAGCCTAGAGTTTGCACCAGACCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGACTCGGAGGTTCTaGAGCCCAGCGAAGTCCATC +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPKTRRF*SPAKSI
Trigger: GATGGACTTCGCTGGGCTCAAGAACCTCCGAGTCTT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGCAATTCTGGAAGGACTaGCAGCTTATTCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGQFWKD*QLILVQ
Trigger: CTGAACAAGAATAAGCTGCAAGTCCTTCCAGAATTG...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGATGCGACTGATGTTGTaGTTGTTGAGGGTAAGGATC +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVMRLML*LLRVRI
Trigger: GATCCTTACCCTCAACAACAACAACATCAGTCGCAT...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTGCACATCCGCCACGTaGAAGCCCCTCAAATGCACA +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSCTSAT*KPLKCT
Trigger: TGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGCA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTGCACATCCGCCACGTaGAAGCCCCTCAAATGCACA +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPCTSAT*KPLKCT
Trigger: TGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGCA...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGCCTGCAGGGATGGCTTaGATGGAGTTCTGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQPAGMA*MEFCSR
Trigger: CCTAGAACAGAACTCCATCAAAGCCATCCCTGCAGG...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTCCATCAAACAGTCCCTaGACAATCTCGGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGPSNSP*TISVIL
Trigger: CAAGATCACCGAGATTGTCAAGGGACTGTTTGATGG...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCGGACCAGCTTCTGGTaGGAGCAGTCCACAATCGTG +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCRTSFW*EQSTIV
Trigger: CACGATTGTGGACTGCTCCAACCAGAAGCTGGTCCG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTAGAACAGATACCTCATaGTCATTCAGTCGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: TRGSHMAVPTPSSWSPRGRTDTS*SFSRRS
Trigger: CGACCTGCGACTGAATGACAATGAGGTATCTGTTCT...ACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGGTTTATTTTCCGCAGGTaGGGCAACTTCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: HGCPNSIKLESERWQAGGFIFRR*GNFLKM
Trigger: CATCTTCAAGAAGTTGCCCAACCTGCGGAAAATAAA...CCCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCAGCATCAAGGTTTaGAGGCCACTGAGGCCACGG +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLSIKV*RPLRPR
Trigger: CCGTGGCCTCAGTGGCCTCAAAACCTTGATGCTGAG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCAGCTGAACCCATCCTaGTGGCTGTCACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSQLNPS*WLSLRW
Trigger: CCACCTGAGTGACAGCCACAAGGATGGGTTCAGCTG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCAGCTGAACCCATCCTaGTGGCTGTCACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCQLNPS*WLSLRW
Trigger: CCACCTGAGTGACAGCCACAAGGATGGGTTCAGCTG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTCACAGTCATCTGGGTaGATCTCACACCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSQSSG*ISHRCP
Trigger: GGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTCGCAGCTGAATCCTTaGTCCAGGGGGATGCACTTG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSSQLNP*SRGMHL
Trigger: CAAGTGCATCCCCCTGGACAAAGGATTCAGCTGCGA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCGCCCCGTGGCGGCACTaGTGGGCCACACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIAPWRH*WATQSS
Trigger: TGATGACTGTGTGGCCCACAAGTGCCGCCACGGGGC...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGCACTGTACACTGTGGTaGGAGGGGAACTCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLHCTLW*EGNSGC
Trigger: ACAGCCTGAGTTCCCCTCCAACCACAGTGTACAGTG...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCACTGTACACTGTGGTaGGAGGGGAACTCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLHCTLW*EGNSGC
Trigger: ACAGCCTGAGTTCCCCTCCAACCACAGTGTACAGTG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGCTTCCCCAGGCTCTTaGGAGTTCCTTTGTCCACTA +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQEASPGS*EFLCPL
Trigger: TAGTGGACAAAGGAACTCCAAAGAGCCTGGGGAAGC...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGAAGTCCTGCAGCTCGTaGTTGATGCGCACCTCATGG +
Preference number: 5 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLKSCSS*LMRTSW
Trigger: CCATGAGGTGCGCATCAACAACGAGCTGCAGGACTT...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGCACGGATTCTCTTGTaGGCAGTGCTCGCCGCTAAA +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSARILL*AVLAAK
Trigger: TTTAGCGGCGAGCACTGCCAACAAGAGAATCCGTGC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCACCTCTCGGACTACTaGTCCCAGGCACGGATTCTC +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCHLSDY*SQARIL
Trigger: GAGAATCCGTGCCTGGGACAAGTAGTCCGAGAGGTG...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGTGGGCAGACTTGACTaGGCTCCCAGCCTTCCGCTT +
Preference number: 5 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEVGRLD*APSLPL
Trigger: AAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCAC...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAGGCGGCCTGGCCATATCTCATaGCTTTTTAAAAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: TWLSQLHQAGVREVAGRRPGHIS*LFKRPL
Trigger: GAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGG...CCGCCTGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAGCTCTCAAGTCCATTTaGGGTGACAGCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQEALKSI*GDSSVS
Trigger: GGAGACAGAGCTGTCACCCAAAATGGACTTGAGAGC...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGCTTTTGCTGTCTTGGTaGATGGGGGCTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRLLLSW*MGAGFR
Trigger: CCTGAATCCAGCCCCCATCAACCAAGACAGCAAAAG...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGACAGACCTGGCCCTTTaGCTGTCTTGGTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLTDLAL*LSWLMG
Trigger: CCCCATCAACCAAGACAGCAAAAGGGCCAGGTCTGT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCATCAGGGCTTCCAAACTaGAGGGAGAAGGCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQASGLPN*REKAQN
Trigger: ATTTTGAGCCTTCTCCCTCAAGTTTGGAAGCCCTGA...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTGGTATCTGGGATCTaGAGTCTGAGGGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLVSGI*SLRGRS
Trigger: TGACCTGCCCCTCAGACTCAAGATCCCAGATACCAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTCCCTAGTGTTTCCTTaGGCACTGTTGAGCCCACAC +
Preference number: 5 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQSLVFP*ALLSPH
Trigger: GTGTGGGCTCAACAGTGCCAAAGGAAACACTAGGGA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp CTCTGCTATTTTGTTGTGATGGAGGCACAATGCAGGGCATTGAGCTaGAAGGCAGATGGGAGATGGCTCCAGCTGCCCACTGACCTCCAT +
Preference number: 5 (lower is better)
Translates to: LCYFVVMEAQCRALS*KADGRWLQLPTDLH
Trigger: ATGGAGGTCAGTGGGCAGCTGGAGCCATCTCCCATCTGCCTTCCAGCTCAATGCCCTGCATTGTGCCTCCATCACAACAAAATAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAATGACGCTGACCTGGTaGTCTTCCAGATGCAAGACT +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQEMTLTW*SSRCKT
Trigger: AGTCTTGCATCTGGAAGACAACCAGGTCAGCGTCAT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCAATTCTGGAAGGACTaGCAGCTTATTCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVQFWKD*QLILVQ
Trigger: CTGAACAAGAATAAGCTGCAAGTCCTTCCAGAATTG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp ACCATGATATTCTCTTCCCTCGCCTCCTCTAGGAAGACCCCTCTCCTGGGGAGGGTGGTTGTTGTCCAGTaGCAGGTTCTTCACATCGGT +
Preference number: 5 (lower is better)
Translates to: TMIFSSLASSRKTPLLGRVVVVQ*QVLHIG
Trigger: ACCGATGTGAAGAACCTGCAACTGGACAACAACCAC...CCTCCCCAGGAGAGGGGTCTTCCTAGAGGAGGCGAGGGAAGAGAATATCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCTGATGTTGTTGTTGTaGAGGGTAAGGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVLMLLL*RVRISK
Trigger: TTTGGAGATCCTTACCCTCAACAACAACAACATCAG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCCTGCAGGGATGGCTTaGATGGAGTTCTGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLPAGMA*MEFCSR
Trigger: CCTAGAACAGAACTCCATCAAAGCCATCCCTGCAGG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCTGGAGAGGCAGGCATaGCATTTGGCCACAATGTTG +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLLERQA*HLATML
Trigger: CAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTTGTTTTCGCAGTCGTaGTCCTCACAGTCATCTGGG +
Preference number: 5 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQLFSQS*SSQSSG
Trigger: CCCAGATGACTGTGAGGACAACGACTGCGAAAACAA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTCGCAGCTGAATCCTTaGTCCAGGGGGATGCACTTG +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSQLNP*SRGMHL
Trigger: CAAGTGCATCCCCCTGGACAAAGGATTCAGCTGCGA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATCGCAGCTGAATCCTTaGTCCAGGGGGATGCACTTG +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQSQLNP*SRGMHL
Trigger: CAAGTGCATCCCCCTGGACAAAGGATTCAGCTGCGA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAATCTTTGCCCACGAAGTaGACAGTGATGAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQESLPTK*TVMSFS
Trigger: CGAGAAGCTCATCACTGTCAACTTCGTGGGCAAAGA...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTCCTGCAGCTCGTTGTaGATGCGCACCTCATGGATG +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCSCSSL*MRTSWM
Trigger: CATCCATGAGGTGCGCATCAACAACGAGCTGCAGGA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGCACGGATTCTCTTGTaGGCAGTGCTCGCCGCTAAA +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSARILL*AVLAAK
Trigger: TTTAGCGGCGAGCACTGCCAACAAGAGAATCCGTGC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTCCATGATGGGCACCTaGGAGGCTGTGGCACATGAT +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSSMMGT*EAVAHD
Trigger: ATCATGTGCCACAGCCTCCAAGGTGCCCATCATGGA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGAAGAACTGGGCATTTaGGGCACTGACATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKEELGI*GTDIQD
Trigger: GTCCTGGATGTCAGTGCCCAAAATGCCCAGTTCTTC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGCCACTTAAGAGCTCCTaGTGTAATAAGGCAATTGTC +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVPLKSS*CNKAIV
Trigger: GACAATTGCCTTATTACACAAGGAGCTCTTAAGTGG...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGGCTCTCAAGTCCATTTaGGGTGACAGCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKALKSI*GDSSVS
Trigger: GGAGACAGAGCTGTCACCCAAAATGGACTTGAGAGC...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGACTTGCAGCTTATTCTaGTTCAGGCGCAGTCGCTCT +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKTCSLF*FRRSRS
Trigger: AGAGCGACTGCGCCTGAACAAGAATAAGCTGCAAGT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCGTGGTTGTTGTCCAGTaGCAGGTTCTTCACATCGGT +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSVVVVQ*QVLHIG
Trigger: ACCGATGTGAAGAACCTGCAACTGGACAACAACCAC...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAGCTGATGTGGTTGTaGTCCAGTTGCAGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSQLMWL*SSCRFF
Trigger: GAAGAACCTGCAACTGGACAACAACCACATCAGCTG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAACGACTGATGTTGTTGTaGTTGAGGGTAAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQERLMLL*LRVRIS
Trigger: GGAGATCCTTACCCTCAACAACAACAACATCAGTCG...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAATTCGCTTCAGTTTCTaGTACTGGGTGAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQEIRFSF*YWVKAP
Trigger: AGGAGCCTTCACCCAGTACAAGAAACTGAAGCGAAT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCACAATCTCGGTGATCTaGTTCCCATACAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSTISVI*FPYRTS
Trigger: GCTGGTCCTGTATGGGAACAAGATCACCGAGATTGT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTTGATCTTGTTGGCATaGAGGAGGAGCAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLILLA*RRSSCR
Trigger: CCTACAGCTGCTCCTCCTCAATGCCAACAAGATCAA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAATCTGGCTGATGCGCTaGTTGGCGAGTCGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEIWLMR*LASRRG
Trigger: CCCGCGCCGACTCGCCAACAAGCGCATCAGCCAGAT...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGATGCTGATGCTGTTGTaGCTCAGGTCAATAAGCGTC +
Preference number: 5 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQMLMLL*LRSISV
Trigger: GACGCTTATTGACCTGAGCAACAACAGCATCAGCAT...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGACGCTGGAAATGTCATaGCCATGGAGGGTTAGCACT +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLTLEMS*PWRVST
Trigger: AGTGCTAACCCTCCATGGCAATGACATTTCCAGCGT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGCAAAACCAGAGTACTTaGCACTGGAAGCGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLQNQST*HWKRWV
Trigger: AACCCACCGCTTCCAGTGCAAAGTACTCTGGTTTTG...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAGGCAGGCATTGCATTaGGCCACAATGTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPRQALH*ATMLMS
Trigger: GGACATCAACATTGTGGCCAAATGCAATGCCTGCCT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCAGCTGAACCCATCCTaGTGGCTGTCACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYQLNPS*WLSLRW
Trigger: CCACCTGAGTGACAGCCACAAGGATGGGTTCAGCTG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCACACGGTGCAGGACTaGCAGCCTGGTGACACCCCC +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNHTVQD*QPGDTP
Trigger: GGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCGAAGAACTGGGCATTTaGGGCACTGACATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSEELGI*GTDIQD
Trigger: GTCCTGGATGTCAGTGCCCAAAATGCCCAGTTCTTC...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGGGGACAGCAATATTTTaGAGTGGCAGTGAGACTGAG +
Preference number: 5 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQGTAIF*SGSETE
Trigger: CTCAGTCTCACTGCCACTCAAAAATATTGCTGTCCC...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCTTCCTTCTTCCAGTaGCCTCGTTTTCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSPSFFQ*PRFPPS
Trigger: AGATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGGGACAGCCACTTCCATaGCTTGTATTGCCACTTAAG +
Preference number: 5 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQGQPLP*LVLPLK
Trigger: CTTAAGTGGCAATACAAGCAATGGAAGTGGCTGTCC...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAAACCGCATTCTTCCATTaGTTCGACCCTCAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQETAFFH*FDPQFS
Trigger: GGAAAACTGAGGGTCGAACAAATGGAAGAATGCGGT...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp TTTCAGTCCACAACTAGACTTCTGGACCCATCTCTCCCTACAGTATaGGGTGAGATGCCCCACGGTTTGGAGGTGCTGGAGAGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: FQSTTRLLDPSLPTV*GEMPHGLEVLESGN
Trigger: ATTCCCACTCTCCAGCACCTCCAAACCGTGGGGCATCTCACCTCATACTGTAGGGAGAGATGGGTCCAGAAGTCTAGTTGTGGACTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS TCA 90 bp TTCAAATCACTGTGGACATGCTTTCTGTGGCAATTCACTATGCTGTaGGTTCCAGGAAGGAGGGGCCGGGTGTGTGCAGCCTCAACACCT +
Preference number: 5 (lower is better)
Translates to: FKSLWTCFLWQFTML*VPGRRGRVCAASTP
Trigger: AGGTGTTGAGGCTGCACACACCCGGCCCCTCCTTCCTGGAACTCACAGCATAGTGAATTGCCACAGAAAGCATGTCCACAGTGATTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS TCA 90 bp GGGAGTGGGAGGTCCCCAAGATTACACACCGTCTGTAGCCTCGCCTaGGCTATATGTATTTCTCTACTTGCCCTTTGGGGAGCACACTTT +
Preference number: 5 (lower is better)
Translates to: GSGRSPRLHTVCSLA*AICISLLALWGAHF
Trigger: AAAGTGTGCTCCCCAAAGGGCAAGTAGAGAAATACATATAGCTCAGGCGAGGCTACAGACGGTGTGTAATCTTGGGGACCTCCCACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS GCA 90 bp CATTCTTGTTGTCACACAAGTCCCCTCCATAGCCCTCGGCACACTTaGACATGTATGAGGTCCCAGTTGCCACACATTTTCCATGGTGGC +
Preference number: 5 (lower is better)
Translates to: HSCCHTSPLHSPRHT*TCMRSQLPHIFHGG
Trigger: GCCACCATGGAAAATGTGTGGCAACTGGGACCTCATACATGTGCAAGTGTGCCGAGGGCTATGGAGGGGACTTGTGTGACAACAAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp CACAGAGCAAGCATCTCAAGTCTCCTATCAGCTCAAGGCCCCCTCTaGTATTTTGTTGTGATGGAGGCACAATGCAGGGCATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: HRASISSLLSAQGPL*YFVVMEAQCRALSW
Trigger: CCAGCTCAATGCCCTGCATTGTGCCTCCATCACAACAAAATAGCAGAGGGGGCCTTGAGCTGATAGGAGACTTGAGATGCTTGCTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 90 bp GAAACAGCAGCCCTGAGAGGTGAAGTACCTGGAGCCATAAGTGACTaGACACAGCCATTTGGGCACAGAGCAAGCATCTCAAGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: ETAALRGEVPGAISD*TQPFGHRASISSLL
Trigger: TAGGAGACTTGAGATGCTTGCTCTGTGCCCAAATGGCTGTGTCCAGTCACTTATGGCTCCAGGTACTTCACCTCTCAGGGCTGCTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 90 bp CTTGGAGATGTGGGCTTGTCACTGGCTGGCAGTGTGTTCCTCATCTaGGAGCAAGTCCAGGGCATAAGAATGTCCCAGGCTTTGGATAAT +
Preference number: 5 (lower is better)
Translates to: LGDVGLSLAGSVFLI*EQVQGIRMSQALDN
Trigger: ATTATCCAAAGCCTGGGACATTCTTATGCCCTGGACTTGCTCCCAGATGAGGAACACACTGCCAGCCAGTGACAAGCCCACATCTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCATTCGCTTCAGTTTCTaGTACTGGGTGAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSIRFSF*YWVKAP
Trigger: AGGAGCCTTCACCCAGTACAAGAAACTGAAGCGAAT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCATTCGCTTCAGTTTCTaGTACTGGGTGAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPIRFSF*YWVKAP
Trigger: AGGAGCCTTCACCCAGTACAAGAAACTGAAGCGAAT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTTGATCTTGTTGGCATaGAGGAGGAGCAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSLILLA*RRSSCR
Trigger: CCTACAGCTGCTCCTCCTCAATGCCAACAAGATCAA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTGGCTGATGCGCTTGTaGGCGAGTCGGCGCGGGCTG +
Preference number: 5 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLWLMRL*ASRRGL
Trigger: CAGCCCGCGCCGACTCGCCAACAAGCGCATCAGCCA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGAGAACAGATACCTCATaGTCATTCAGTCGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLRTDTS*SFSRRS
Trigger: CGACCTGCGACTGAATGACAATGAGGTATCTGTTCT...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAGCATGCTGATGCTGTaGTTGCTCAGGTCAATAAGC +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPSMLML*LLRSIS
Trigger: GCTTATTGACCTGAGCAACAACAGCATCAGCATGCT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCAGGCAGGCATTGCATTaGGCCACAATGTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSRQALH*ATMLMS
Trigger: GGACATCAACATTGTGGCCAAATGCAATGCCTGCCT...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATTGTTTTCGCAGTCGTaGTCCTCACAGTCATCTGGG +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLFSQS*SSQSSG
Trigger: CCCAGATGACTGTGAGGACAACGACTGCGAAAACAA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATACCTGCAGGGAGATGTaGGCCTGGGGTCGGACCTTG +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNTCREM*AWGRTL
Trigger: CAAGGTCCGACCCCAGGCCAACATCTCCCTGCAGGT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCTCTTTGGAGTTCCTTaGTCCACTACTAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLFGVP*STTRFR
Trigger: CCTGAACCTAGTAGTGGACAAAGGAACTCCAAAGAG...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCTTGGCAGAGTCATTCTaGTTGTCACACAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSLAESF*LSHKSP
Trigger: AGGGGACTTGTGTGACAACAAGAATGACTCTGCCAA...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGTTGGCAGAGTCATTCTaGTTGTCACACAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: FMLNHQGVPHGCPNSIKLLAESF*LSHKSP
Trigger: AGGGGACTTGTGTGACAACAAGAATGACTCTGCCAA...CAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACTCCATGATGGGCACCTaGGAGGCTGTGGCACATGAT +
Preference number: 5 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYSMMGT*EAVAHD
Trigger: ATCATGTGCCACAGCCTCCAAGGTGCCCATCATGGA...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCCTCAATGAGCAGCTCTaGGTCTACTGCCGACATAAT +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPLNEQL*VYCRHN
Trigger: ATTATGTCGGCAGTAGACCAAGAGCTGCTCATTGAG...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCAGGTTGGGAAGGGTGTaGGGCAGATCCCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIRLGRV*GRSQDP
Trigger: AGGATCCTGGGATCTGCCCAACACCCTTCCCAACCT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCAGGGCTTCCAAACTaGAGGGAGAAGGCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLSGLPN*REKAQN
Trigger: ATTTTGAGCCTTCTCCCTCAAGTTTGGAAGCCCTGA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCACGTTTTAATCATCATTaGTTAGAGGAGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: GGPTWLSQLHQAGVREVARFNHH*LEEPHF
Trigger: GAAATGAGGCTCCTCTAACAAATGATGATTAAAACG...TGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGTTCCTTGCTATGAGATaGAAAAGGCAAAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: PGGPTWLSQLHQAGVREVFLAMR*KRQNCL
Trigger: AAGACAGTTTTGCCTTTTCAATCTCATAGCAAGGAA...CACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GTCCCACATGGCTGTCCCAACTCCATCAAGCTGGAGTCCGAGAGGTGGCAGGCAATTATCTGTGTGTCTTaGGTCTATGATCACCGCATT +
Preference number: 5 (lower is better)
Translates to: VPHGCPNSIKLESERWQAIICVS*VYDHRI
Trigger: AATGCGGTGATCATAGACCAAAGACACACAGATAAT...TGCCTGCCACCTCTCGGACTCCAGCTTGATGGAGTTGGGACAGCCATGTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGTCTGAGGGGCAGGTCACTTGTTGCTATGGGCTTCTGCTCCCAGCAAAGGCAGTTTCCTTTGGCACTGTaGAGCCCACACTACAAAACA +
Preference number: 5 (lower is better)
Translates to: SLRGRSLVAMGFCSQQRQFPLAL*SPHYKT
Trigger: TGTTTTGTAGTGTGGGCTCAACAGTGCCAAAGGAAA...CTGCCTTTGCTGGGAGCAGAAGCCCATAGCAACAAGTGACCTGCCCCTCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp CCTGCACGCTGGCTGCTCCATCGAAAGCTCCCTCTCGCACCTCCTTaGTCTTATTGTTACTCAGATTTATTTTCCGCAGGTTGGGCAACT +
Preference number: 5 (lower is better)
Translates to: PARWLLHRKLPLAPP*SYCYSDLFSAGWAT
Trigger: AGTTGCCCAACCTGCGGAAAATAAATCTGAGTAACAATAAGATCAAGGAGGTGCGAGAGGGAGCTTTCGATGGAGCAGCCAGCGTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS GCA 90 bp TTTATCCCTTTAGCTGGCGAAATCACCTCCGACAAATCCGCAGATTaGACTCACAAACTCGTCAGCTTACACCGGGCTTTTCTTCCGCGC +
Preference number: 5 (lower is better)
Translates to: FIPLAGEITSDKSAD*THKLVSLHRAFLPR
Trigger: GCGCGGAAGAAAAGCCCGGTGTAAGCTGACGAGTTTGTGAGTGCAATCTGCGGATTTGTCGGAGGTGATTTCGCCAGCTAAAGGGATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 90 bp CCAACCACAAGCCAGGGTTCCTGTAGGCATCATCTTCTTGCCTCATaGCTCAGCAGCTGCTCATTTTTCTCCCAGAAAGTCCAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: PTTSQGSCRHHLLAS*LSSCSFFSQKVQSH
Trigger: ATGACTCTGGACTTTCTGGGAGAAAAATGAGCAGCTGCTGAGGCATGAGGCAAGAAGATGATGCCTACAGGAACCCTGGCTTGTGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 90 bp CTCTCCCTACAGTATGAGGTGAGATGCCCCACGGTTTGGAGGTGCTaGAGAGTGGGAATTGGAGAAGTGATAGACAGTTTAGCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: LSLQYEVRCPTVWRC*RVGIGEVIDSLAGN
Trigger: ATTCCCAGCTAAACTGTCTATCACTTCTCCAATTCCCACTCTCCAGCACCTCCAAACCGTGGGGCATCTCACCTCATACTGTAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 90 bp TGGACCCATCTCTCCCTACAGTATGAGGTGAGATGCCCCACGGTTTaGAGGTGCTGGAGAGTGGGAATTGGAGAAGTGATAGACAGTTTA +
Preference number: 5 (lower is better)
Translates to: WTHLSLQYEVRCPTV*RCWRVGIGEVIDSL
Trigger: TAAACTGTCTATCACTTCTCCAATTCCCACTCTCCAGCACCTCCAAACCGTGGGGCATCTCACCTCATACTGTAGGGAGAGATGGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACGACTGATGTTGTTGTaGTTGAGGGTAAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQRLMLL*LRVRIS
Trigger: GGAGATCCTTACCCTCAACAACAACAACATCAGTCG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAAGAACAGATACCTCATaGTCATTCAGTCGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQRTDTS*SFSRRS
Trigger: CGACCTGCGACTGAATGACAATGAGGTATCTGTTCT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAATGCTGATGCTGTTGTaGCTCAGGTCAATAAGCGTC +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQMLMLL*LRSISV
Trigger: GACGCTTATTGACCTGAGCAACAACAGCATCAGCAT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAGGATGCCGTTGTCCTaGTCAGTGGCCACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNRMPLS*SVATCR
Trigger: CCTGCAGGTGGCCACTGACAAGGACAACGGCATCCT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATGTATGAGGTCCCAGTaGCCACACATTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQCMRSQ*PHIFHG
Trigger: ACCATGGAAAATGTGTGGCAACTGGGACCTCATACA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCAGGCACGGATTCTCTaGTTGGCAGTGCTCGCCGCT +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNQARIL*LAVLAA
Trigger: AGCGGCGAGCACTGCCAACAAGAGAATCCGTGCCTG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATGTGGGCAGACTTGACTaGGCTCCCAGCCTTCCGCTT +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNVGRLD*APSLPL
Trigger: AAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCAC...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCCTGGATAGGCTGCCCTaGGTCACTTTCCCTAGATGC +
Preference number: 5 (lower is better)
Translates to: IPSFFPSFLLPVASFSSILDRLP*VTFPRC
Trigger: GCATCTAGGGAAAGTGACCAAGGGCAGCCTATCCAG...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CATCTAGCGCTGTGGGCAGACTTGACTTGGCTCCCAGCCTTCCGCTTCCAAGAACCACTTAAGAGCTCCTaGTGTAATAAGGCAATTGTC +
Preference number: 5 (lower is better)
Translates to: HLALWADLTWLPAFRFQEPLKSS*CNKAIV
Trigger: GACAATTGCCTTATTACACAAGGAGCTCTTAAGTGG...TTCTTGGAAGCGGAAGGCTGGGAGCCAAGTCAAGTCTGCCCACAGCGCTAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAGCCACTTCCATTGCTaGTATTGCCACTTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SSFISFMLNHQGVPHGCPSHFHC*YCHLRA
Trigger: AGCTCTTAAGTGGCAATACAAGCAATGGAAGTGGCT...GGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAGGACAGCCACTTCCATaGCTTGTATTGCCACTTAAG +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQGQPLP*LVLPLK
Trigger: CTTAAGTGGCAATACAAGCAATGGAAGTGGCTGTCC...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGCCTGGCCATATCTCATaGCTTTTTAAAAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLPGHIS*LFKRPL
Trigger: GAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGG...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCTTTTGCTGTCTTGGTaGATGGGGGCTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYLLLSW*MGAGFR
Trigger: CCTGAATCCAGCCCCCATCAACCAAGACAGCAAAAG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTACCGCATTCTTCCATTaGTTCGACCCTCAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCTAFFH*FDPQFS
Trigger: GGAAAACTGAGGGTCGAACAAATGGAAGAATGCGGT...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGTTTCCTTTGGCACTGTaGAGCCCACACTACAAAACA +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKFPLAL*SPHYKT
Trigger: TGTTTTGTAGTGTGGGCTCAACAGTGCCAAAGGAAA...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS GCA 90 bp TTAGCTCAGGGATGGCCTCTGGGATCCTGTCACTGGAAGGAGAGATaGTCCAATTTCCTGCGACATCAAACCTCTCCAGTTCCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: LAQGWPLGSCHWKER*SNFLRHQTSPVPFL
Trigger: AAGAAAAGGAACTGGAGAGGTTTGATGTCGCAGGAAATTGGAGCATCTCTCCTTCCAGTGACAGGATCCCAGAGGCCATCCCTGAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACCAGCTGATGTGGTTGTaGTCCAGTTGCAGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYQLMWL*SSCRFF
Trigger: GAAGAACCTGCAACTGGACAACAACCACATCAGCTG...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAAATGCGACTGATGTTGTaGTTGTTGAGGGTAAGGATC +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQMRLML*LLRVRI
Trigger: GATCCTTACCCTCAACAACAACAACATCAGTCGCAT...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGAGGATGCGACTGATGTaGTTGTTGTTGAGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: FGPPLVLTDQLGSSREPERMRLM*LLLRVR
Trigger: CCTTACCCTCAACAACAACAACATCAGTCGCATCCT...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTTATTTTCCGCAGGTaGGGCAACTTCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: PLQLHFLHAESPGGPTWLFIFRR*GNFLKM
Trigger: CATCTTCAAGAAGTTGCCCAACCTGCGGAAAATAAA...CAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTAGCTCGGTCACATCCTaGGGCATGCCTCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLSSVTS*GMPLGR
Trigger: CCTCCCCAGAGGCATGCCCAAGGATGTGACCGAGCT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCAGAGATGTGAGGTCGTaGAAGGAGCCTTCAGGAACG +
Preference number: 5 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIRDVRS*KEPSGT
Trigger: CGTTCCTGAAGGCTCCTTCAACGACCTCACATCTCT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCAAGTTTGGATATGCATaGGAAAGTGTCACAGATGGG +
Preference number: 5 (lower is better)
Translates to: LQLHFLHAESPGGPTWLSKFGYA*ESVTDG
Trigger: CCCATCTGTGACACTTTCCAATGCATATCCAAACTT...GGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTTGGCCCACCATTGGTACTCACAGATCAACTAGGCTCCTCTAGGGAACCTGAGGTCTTTGGCCCACCATaGGTACTCACAGATCAACTA +
Preference number: 5 (lower is better)
Translates to: FGPPLVLTDQLGSSREPEVFGPP*VLTDQL
Trigger: TAGTTGATCTGTGAGTACCAATGGTGGGCCAAAGAC...CTCAGGTTCCCTAGAGGAGCCTAGTTGATCTGTGAGTACCAATGGTGGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTTCCATTGCTTGTATaGCCACTTAAGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQLPLLV*PLKSSL
Trigger: CAAGGAGCTCTTAAGTGGCAATACAAGCAATGGAAG...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCTTCCATTGCTTGTATaGCCACTTAAGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSLPLLV*PLKSSL
Trigger: CAAGGAGCTCTTAAGTGGCAATACAAGCAATGGAAG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCAGCCACTTCCATTGCTaGTATTGCCACTTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSSHFHC*YCHLRA
Trigger: AGCTCTTAAGTGGCAATACAAGCAATGGAAGTGGCT...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CTCTCCAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTTTTTTCCCTCTGAGCTaGGGAGTTATCCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LSSFISFMLNHQGVPHGCFFPLS*GVIPLL
Trigger: AAGAAGAGGGATAACTCCCAAGCTCAGAGGGAAAAA...ACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTGGAGAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp CAGCTTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAATTTTTCCCTCTGAGCTaGGGAGTTATCCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: QLHFLHAESPGGPTWLSQFFPLS*GVIPLL
Trigger: AAGAAGAGGGATAACTCCCAAGCTCAGAGGGAAAAA...TTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCAGTCTGGCAATAGCTTaGTTTCTGGTGAAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSSLAIA*FLVKGK
Trigger: CTTTCCCTTCACCAGAAACAAAGCTATTGCCAGACT...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp TCAAAGAATACTCACCCGTGGCATCTTCATCGGGACACGAGGCTGTaGACACGTGAACCATCACTTTGTAGGTGGAAAATTGAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: SKNTHPWHLHRDTRL*TREPSLCRWKIEPS
Trigger: ACTGGGCTCAATTTTCCACCTACAAAGTGATGGTTCACGTGTTCACAGCCTCGTGTCCCGATGAAGATGCCACGGGTGAGTATTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS TCA 90 bp TTGCTCCAGGAACACGTGCTTTGTAGAAATCCTGTAGGAGGGATGTaGTTTCTGTCTAGTGCCATCCAACAGAGTTCCACACTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: LLQEHVLCRNPVGGM*FLSSAIQQSSTLGS
Trigger: ACTGCCCAGTGTGGAACTCTGTTGGATGGCACTAGACAGAAATCACATCCCTCCTACAGGATTTCTACAAAGCACGTGTTCCTGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521130.1
CDS GCA 90 bp GCAATTGACTCCAGCGAAGCCAGACACTCCAGCCTCTTAAGCACATaGAGTGGGAATCTCTCTGAGCCTGTTTCCTTCCTTCTTCTAATA +
Preference number: 5 (lower is better)
Translates to: AIDSSEARHSSLLST*SGNLSEPVSFLLLI
Trigger: TATTAGAAGAAGGAAGGAAACAGGCTCAGAGAGATTCCCACTGCATGTGCTTAAGAGGCTGGAGTGTCTGGCTTCGCTGGAGTCAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCCTGATGTTGTTGTTGTaGAGGGTAAGGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSLMLLL*RVRISK
Trigger: TTTGGAGATCCTTACCCTCAACAACAACAACATCAG...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GCCCAGTTTAGCATGCACAGCTCTTTGTGGTCAAAACCCTACCTTCCTACCTACAGCATGCTGATGCTGTaGTTGCTCAGGTCAATAAGC +
Preference number: 5 (lower is better)
Translates to: AQFSMHSSLWSKPYLPTYSMLML*LLRSIS
Trigger: GCTTATTGACCTGAGCAACAACAGCATCAGCATGCT...GTAGGTAGGAAGGTAGGGTTTTGACCACAAAGAGCTGTGCATGCTAAACTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCAGGCAGGCATTGCATTaGGCCACAATGTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: IPSFFPSFLLPVASFSSIRQALH*ATMLMS
Trigger: GGACATCAACATTGTGGCCAAATGCAATGCCTGCCT...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATTCTGGATGCAGGTGTaGATGGGCACAGTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEFWMQV*MGTVQS
Trigger: GGACTGCACTGTGCCCATCAACACCTGCATCCAGAA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTCCATGATGGGCACCTaGGAGGCTGTGGCACATGAT +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNSMMGT*EAVAHD
Trigger: ATCATGTGCCACAGCCTCCAAGGTGCCCATCATGGA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACTGGATAGGCTGCCCTaGGTCACTTTCCCTAGATGC +
Preference number: 5 (lower is better)
Translates to: WSLHLAFLKVRASKLEGELDRLP*VTFPRC
Trigger: GCATCTAGGGAAAGTGACCAAGGGCAGCCTATCCAG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCATCAAGATTATCTGTGTGTCTTaGGTCTATGATCACCGCATT +
Preference number: 5 (lower is better)
Translates to: SFMLNHQGVPHGCPNSIKIICVS*VYDHRI
Trigger: AATGCGGTGATCATAGACCAAAGACACACAGATAAT...CTTGATGGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp TTCACTGAGGGGAAATTCTTTCTCTTAGAGTCATTAGCTCAGGGATaGCCTCTGGGATCCTGTCACTGGAAGGAGAGATGCTCCAATTTC +
Preference number: 5 (lower is better)
Translates to: FTEGKFFLLESLAQG*PLGSCHWKERCSNF
Trigger: GAAATTGGAGCATCTCTCCTTCCAGTGACAGGATCCCAGAGGCCATCCCTGAGCTAATGACTCTAAGAGAAAGAATTTCCCCTCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp ATCCCTTCCTTCTTTCCTTCCTTCCTTCTTCCAGTTGCCTCGTTTTCCTCCATCCTCTTTGGAGTTCCTTaGTCCACTACTAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: IPSFFPSFLLPVASFSSILFGVP*STTRFR
Trigger: CCTGAACCTAGTAGTGGACAAAGGAACTCCAAAGAG...GATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGGAAGGAAAGAAGGAAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTCCCTAGTGTTTCCTTaGGCACTGTTGAGCCCACAC +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNSLVFP*ALLSPH
Trigger: GTGTGGGCTCAACAGTGCCAAAGGAAACACTAGGGA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp TCTCTTGAACTTACTTCTCCTGTCTACCTGAAATTTTGCACCCTTTaGCGAACATCTGTGTCATCTTCATCTCTACCCCACCCTCACCCC +
Preference number: 5 (lower is better)
Translates to: SLELTSPVYLKFCTL*RTSVSSSSLPHPHP
Trigger: GGGGTGAGGGTGGGGTAGAGATGAAGATGACACAGATGTTCGTCAAAGGGTGCAAAATTTCAGGTAGACAGGAGAAGTAAGTTCAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS TCA 90 bp AGCACAGTTGATCTTGATATTTGGTCAGAGTGCTCAGTTGCAGGGTaGTGGTGCAAGTCTCAAAGGCAACAGGGACCAAATTTTCTAGGC +
Preference number: 5 (lower is better)
Translates to: STVDLDIWSECSVAG*WCKSQRQQGPNFLG
Trigger: GCCTAGAAAATTTGGTCCCTGTTGCCTTTGAGACTTGCACCATCACCCTGCAACTGAGCACTCTGACCAAATATCAAGATCAACTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521130.1
CDS GCA 90 bp ACTCTGGATTATCCTAATCTCACTTGCCCTCAGCATGGCTGCCTATaGAAAGCATTCCAGACAAACACGAAGGATCTGTTTAGACTGGAC +
Preference number: 5 (lower is better)
Translates to: TLDYPNLTCPQHGCL*KAFQTNTKDLFRLD
Trigger: GTCCAGTCTAAACAGATCCTTCGTGTTTGTCTGGAATGCTTTGCATAGGCAGCCATGCTGAGGGCAAGTGAGATTAGGATAATCCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATACAATCTCGGTGATCTaGTTCCCATACAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNTISVI*FPYRTS
Trigger: GCTGGTCCTGTATGGGAACAAGATCACCGAGATTGT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAATCTTTGCCCACGAAGTaGACAGTGATGAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: WSLHLAFLKVRASKLEGESLPTK*TVMSFS
Trigger: CGAGAAGCTCATCACTGTCAACTTCGTGGGCAAAGA...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCACTGTACACTGTGGTaGGAGGGGAACTCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLHCTLW*EGNSGC
Trigger: ACAGCCTGAGTTCCCCTCCAACCACAGTGTACAGTG...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAAAGGCTGAGCAGGCATaGGCAGAGTCATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: WSLHLAFLKVRASKLEGEKAEQA*AESFLL
Trigger: CAACAAGAATGACTCTGCCAATGCCTGCTCAGCCTT...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTTATTCCCTGCGTCTTaGGCCCACCATTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNLFPAS*AHHWYS
Trigger: TGAGTACCAATGGTGGGCCAAAGACGCAGGGAATAA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCCTTCCTTCTTCCAGTaGCCTCGTTTTCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNPSFFQ*PRFPPS
Trigger: AGATGGAGGAAAACGAGGCAACTGGAAGAAGGAAGG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TTCATTTCCTTCATGCTGAATCACCAGGGGGTCCCACATGGCTGTCCCAACTCCTTCCTTGCTATGAGATaGAAAAGGCAAAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: FISFMLNHQGVPHGCPNSFLAMR*KRQNCL
Trigger: AAGACAGTTTTGCCTTTTCAATCTCATAGCAAGGAA...GGAGTTGGGACAGCCATGTGGGACCCCCTGGTGATTCAGCATGAAGGAAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS CCA 90 bp ATCTGGTTTTCACTCAAATCTAGTCTGGTGAGCTTCGGCGTGCTCTaGAAAAGCAATTCTGGAAGGACTTGCAGCTTATTCTTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: IWFSLKSSLVSFGVL*KSNSGRTCSLFLFR
Trigger: CCTGAACAAGAATAAGCTGCAAGTCCTTCCAGAATTGCTTTTCCAGAGCACGCCGAAGCTCACCAGACTAGATTTGAGTGAAAACCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
CDS-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAACTCTTTGGAGTTCCTTaGTCCACTACTAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: WSLHLAFLKVRASKLEGELFGVP*STTRFR
Trigger: CCTGAACCTAGTAGTGGACAAAGGAACTCCAAAGAG...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATAAACCAGAGCTTGTCTaGCTCTTCCCTTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNKPELV*LFPSSN
Trigger: GTTTGAGGAAGGGAAGAGCAAGACAAGCTCTGGTTT...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp AGCCAGACACTCCAGCCTCTTAAGCACATGCAGTGGGAATCTCTCTaGGCCTGTTTCCTTCCTTCTTCTAATAGATTTCAAAAGAACCAT +
Preference number: 5 (lower is better)
Translates to: SQTLQPLKHMQWESL*ACFLPSSNRFQKNH
Trigger: ATGGTTCTTTTGAAATCTATTAGAAGAAGGAAGGAAACAGGCTCAGAGAGATTCCCACTGCATGTGCTTAAGAGGCTGGAGTGTCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 90 bp GCAAATACTCTGGATTATCCTAATCTCACTTGCCCTCAGCATGGCTaGCTATGCAAAGCATTCCAGACAAACACGAAGGATCTGTTTAGA +
Preference number: 5 (lower is better)
Translates to: ANTLDYPNLTCPQHG*LCKAFQTNTKDLFR
Trigger: TCTAAACAGATCCTTCGTGTTTGTCTGGAATGCTTTGCATAGGCAGCCATGCTGAGGGCAAGTGAGATTAGGATAATCCAGAGTATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTTTGATCTTGTTGGCATaGAGGAGGAGCAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLLILLA*RRSSCR
Trigger: CCTACAGCTGCTCCTCCTCAATGCCAACAAGATCAA...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp TGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCAAACTTGAGGGAGAAAGTCTGGCAATAGCTTaGTTTCTGGTGAAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: WSLHLAFLKVRASKLEGESLAIA*FLVKGK
Trigger: CTTTCCCTTCACCAGAAACAAAGCTATTGCCAGACT...TTCTCCCTCAAGTTTGGAAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCTGATGTTGTTGTTGTaGAGGGTAAGGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNLMLLL*RVRISK
Trigger: TTTGGAGATCCTTACCCTCAACAACAACAACATCAG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTAGGATGCGACTGATGTaGTTGTTGTTGAGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLRMRLM*LLLRVR
Trigger: CCTTACCCTCAACAACAACAACATCAGTCGCATCCT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTCCATCAAACAGTCCCTaGACAATCTCGGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLPSNSP*TISVIL
Trigger: CAAGATCACCGAGATTGTCAAGGGACTGTTTGATGG...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATTTTATTTTCCGCAGGTaGGGCAACTTCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNFIFRR*GNFLKM
Trigger: CATCTTCAAGAAGTTGCCCAACCTGCGGAAAATAAA...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTATGCTGATGCTGTTGTaGCTCAGGTCAATAAGCGTC +
Preference number: 5 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLMLMLL*LRSISV
Trigger: GACGCTTATTGACCTGAGCAACAACAGCATCAGCAT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp GGGGAGAATTTTCTTAATGGTCCTTGCATTTGGCATTTCTTAAAGTCAGGGCTTAAGTTTGGATATGCATaGGAAAGTGTCACAGATGGG +
Preference number: 5 (lower is better)
Translates to: GENFLNGPCIWHFLKSGLKFGYA*ESVTDG
Trigger: CCCATCTGTGACACTTTCCAATGCATATCCAAACTT...AAGCCCTGACTTTAAGAAATGCCAAATGCAAGGACCATTAAGAAAATTCTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS-3UTR CAA 90 bp AGGCCTGGCCATATCTCATTGCTTTTTAAAAGGCCACTCCCAGGAAAGTTCAATCGTTTTAATCATCATTaGTTAGAGGAGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: RPGHISLLFKRPLPGKFNRFNHH*LEEPHF
Trigger: GAAATGAGGCTCCTCTAACAAATGATGATTAAAACG...ATTGAACTTTCCTGGGAGTGGCCTTTTAAAAAGCAATGAGATATGGCCAGGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404867.7
ENST00000519560.6
CDS TCA 90 bp TTGTATAACACAATGGATCTCTTGAACTTACTTCTCCTGTCTACCTaGAATTTTGCACCCTTTGACGAACATCTGTGTCATCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: LYNTMDLLNLLLLST*NFAPFDEHLCHLHL
Trigger: GAGATGAAGATGACACAGATGTTCGTCAAAGGGTGCAAAATTTCAGGTAGACAGGAGAAGTAAGTTCAAGAGATCCATTGTGTTATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 90 bp AGAAGGAGCTTAAAGAGCCTTCAGTTCAACTACCTCATGATAAAGTaGACCACATTTACATCACTCTTCTTGGTTTTCAAAGAATACTCA +
Preference number: 5 (lower is better)
Translates to: RRSLKSLQFNYLMIK*TTFTSLFLVFKEYS
Trigger: TGAGTATTCTTTGAAAACCAAGAAGAGTGATGTAAATGTGGTGCACTTTATCATGAGGTAGTTGAACTGAAGGCTCTTTAAGCTCCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 72 bp CGGCAGCAACAGCAGCTCCATCGGCGGGGCCGGCGCTaGCCCGCTGCGCATCGCTGGGAGTGCCCAGGTGCG +
Preference number: 6 (lower is better)
Translates to: RQQQQLHRRGRR*PAAHRWECPGA
Trigger: CGCACCTGGGCACTCCCAGCGATGCGCAGCGGGGCAGCGCCGGCCCCGCCGATGGAGCTGCTGTTGCTGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS GCA 72 bp ACCCGAGCGCCTGTCCCTCCACCCCCTTGCAGGCGCTaGTGGTCCCCGCCAGGAGCTCGTGCAGAGCCAGCC +
Preference number: 6 (lower is better)
Translates to: TRAPVPPPPCRR*WSPPGARAEPA
Trigger: GGCTGGCTCTGCACGAGCTCCTGGCGGGGACCAGCAGCGCCTGCAAGGGGGTGGAGGGACAGGCGCTCGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521150.1
CDS GCA 72 bp CCGGCGAAGCCTGGTGGGCAGCGGCAGGTGGGCTCCTaGTGCACCACGATGCACTGGGCCCCGTTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: PAKPGGQRQVGS*CTTMHWAPFWH
Trigger: GTGCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCACCAGGCTTCGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS CCA 72 bp GGGATGCCCCGAGGAACCGCGCGGAGGCCCAGCCCGTaGCAGTCCACGCTGGCAGCGGAGCAGGTACACTTG +
Preference number: 6 (lower is better)
Translates to: GMPRGTARRPSP*QSTLAAEQVHL
Trigger: CAAGTGTACCTGCTCCGCTGCCAGCGTGGACTGCCACGGGCTGGGCCTCCGCGCGGTTCCTCGGGGCATCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
ENST00000521130.1
CDS CCA 72 bp CGAGCGCCTGTCCCTCCACCCCCTTGCAGGCGCTGCTaGTCCCCGCCAGGAGCTCGTGCAGAGCCAGCCTGT +
Preference number: 6 (lower is better)
Translates to: RAPVPPPPCRRC*SPPGARAEPAC
Trigger: ACAGGCTGGCTCTGCACGAGCTCCTGGCGGGGACCAGCAGCGCCTGCAAGGGGGTGGAGGGACAGGCGCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521150.1
CDS GCA 72 bp GGATGCATCCGTGGAAGCCGCCTAGAGGCCGGTCCGTaGCCTGGCGCAAGGCAGAGAGGCCGGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: GCIRGSRLEAGP*PGARQRGRWRW
Trigger: CCACCTCCACCGGCCTCTCTGCCTTGCGCCAGGGCACGGACCGGCCTCTAGGCGGCTTCCACGGATGCATCC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp CCGGGCCTCCTGATCGCAGAGTGGGCCGGTCCAGCCTaGGCGGCACTCGCACACCACGCTGTCCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: PGLLIAEWAGPA*AALAHHAVLLH
Trigger: GTGGAGAAGGACAGCGTGGTGTGCGAGTGCCGCCCAGGCTGGACCGGCCCACTCTGCGATCAGGAGGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp GTGGGCAGCGGCAGGTGGGCTCCTGCTGCACCACGATaGACTGGGCCCCGTTCTGGCACTCGTACTGGTCGC +
Preference number: 6 (lower is better)
Translates to: VGSGRWAPAAPR*TGPRSGTRTGR
Trigger: GCGACCAGTACGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS CCA 72 bp CGTGGCAGTCCACGCTGGCAGCGGAGCAGGTACACTTaGTGGGGCAGGCGACGGCTGGAGGCCCACTCAGGA +
Preference number: 6 (lower is better)
Translates to: RGSPRWQRSRYT*WGRRRLEAHSG
Trigger: TCCTGAGTGGGCCTCCAGCCGTCGCCTGCCCCACCAAGTGTACCTGCTCCGCTGCCAGCGTGGACTGCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
ENST00000521130.1
CDS CCA 72 bp AGTGATGAGCTTCTCGCATCTGGGGCCGGCGAAGCCTaGTGGGCAGCGGCAGGTGGGCTCCTGCTGCACCAC +
Preference number: 6 (lower is better)
Translates to: SDELLASGAGEA*WAAAGGLLLHH
Trigger: GTGGTGCAGCAGGAGCCCACCTGCCGCTGCCCACCAGGCTTCGCCGGCCCCAGATGCGAGAAGCTCATCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS CAA 72 bp GGCTCAGGGCTACTGCAGCGGGCGATGCCAGGCTCCTaGTACCCCGCCTTCACCCACTCCGACAGCCACCGA +
Preference number: 6 (lower is better)
Translates to: GSGLLQRAMPGS*YPAFTHSDSHR
Trigger: TCGGTGGCTGTCGGAGTGGGTGAAGGCGGGGTACAAGGAGCCTGGCATCGCCCGCTGCAGTAGCCCTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp GAGCGGCACAGGCCGTGCTTGCACACGGTGCAGGACTaGCAGCCTGGTGACACCCCCAGGGACTGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: ERHRPCLHTVQD*QPGDTPRDCGG
Trigger: CCCACCACAGTCCCTGGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 90 bp TCGCACACCACGCTGTCCTTCTCCACGGAGCGGCACAGGCCGTGCTaGCACACGGTGCAGGACTTGCAGCCTGGTGACACCCCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SHTTLSFSTERHRPC*HTVQDLQPGDTPRD
Trigger: GTCCCTGGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTCCGTGGAGAAGGACAGCGTGGTGTGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp TGTCAGCCATGGGCTCAGGGCTACTGCAGCGGGCGATaGCAGGCTCCTTGTACCCCGCCTTCACCCACTCCG +
Preference number: 6 (lower is better)
Translates to: CQPWAQGYCSGR*QAPCTPPSPTP
Trigger: CGGAGTGGGTGAAGGCGGGGTACAAGGAGCCTGGCATCGCCCGCTGCAGTAGCCCTGAGCCCATGGCTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp TCTCCACGGAGCGGCACAGGCCGTGCTTGCACACGGTaGAGGACTTGCAGCCTGGTGACACCCCCAGGGACT +
Preference number: 6 (lower is better)
Translates to: SPRSGTGRACTR*RTCSLVTPPGT
Trigger: AGTCCCTGGGGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTCCGTGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp CGCTGTCCTTCTCCACGGAGCGGCACAGGCCGTGCTTaGACACGGTGCAGGACTTGCAGCCTGGTGACACCC +
Preference number: 6 (lower is better)
Translates to: RCPSPRSGTGRA*TRCRTCSLVTP
Trigger: GGGTGTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTCCGTGGAGAAGGACAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp TGGAAGACGTATTTCCGCCGCTTGCTGCGGGTGGGCTaGCAGCACTGGGGCCCACAGCCCCCACGACATTCC +
Preference number: 6 (lower is better)
Translates to: WKTYFRRLLRVG*QHWGPQPPRHS
Trigger: GGAATGTCGTGGGGGCTGTGGGCCCCAGTGCTGCCAGCCCACCCGCAGCAAGCGGCGGAAATACGTCTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp GGTAGCAGGGAGCTGGGAGGAGAGAGCGCTGCAGAGTaGGATCCCAGAGTCCGTGGGCAGTGGACCCAGGAG +
Preference number: 6 (lower is better)
Translates to: GSRELGGESAAE*DPRVRGQWTQE
Trigger: CTCCTGGGTCCACTGCCCACGGACTCTGGGATCCCACTCTGCAGCGCTCTCTCCTCCCAGCTCCCTGCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp CCATGGAGGGTTAGCACTCGCAGGGACCGCAGCCCGTaGAAGGCGTGGACGGGGATGCACCTCAGCCGGTTG +
Preference number: 6 (lower is better)
Translates to: PWRVSTRRDRSP*KAWTGMHLSRL
Trigger: CAACCGGCTGAGGTGCATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCCTGCGAGTGCTAACCCTCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 90 bp TCAGCCATGGGCTCAGGGCTACTGCAGCGGGCGATGCCAGGCTCCTaGTACCCCGCCTTCACCCACTCCGACAGCCACCGAAGACTGCAG +
Preference number: 6 (lower is better)
Translates to: SAMGSGLLQRAMPGS*YPAFTHSDSHRRLQ
Trigger: CTGCAGTCTTCGGTGGCTGTCGGAGTGGGTGAAGGCGGGGTACAAGGAGCCTGGCATCGCCCGCTGCAGTAGCCCTGAGCCCATGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS TCA 72 bp CATGGAGGGTTAGCACTCGCAGGGACCGCAGCCCGTTaGAGGCGTGGACGGGGATGCACCTCAGCCGGTTGT +
Preference number: 6 (lower is better)
Translates to: HGGLALAGTAAR*RRGRGCTSAGC
Trigger: ACAACCGGCTGAGGTGCATCCCCGTCCACGCCTTCAACGGGCTGCGGTCCCTGCGAGTGCTAACCCTCCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp ACCACGCTGTCCTTCTCCACGGAGCGGCACAGGCCGTaGTTGCACACGGTGCAGGACTTGCAGCCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: TTLSFSTERHRP*LHTVQDLQPGD
Trigger: GTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTCCGTGGAGAAGGACAGCGTGGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp GGCTCCTGCTGCACCACGATGCACTGGGCCCCGTTCTaGCACTCGTACTGGTCGCATGGGCTGGTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: GSCCTTMHWAPF*HSYWSHGLVCS
Trigger: ACTGCAGACCAGCCCATGCGACCAGTACGAGTGCCAGAACGGGGCCCAGTGCATCGTGGTGCAGCAGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS CAA 72 bp ACGCTGTCCTTCTCCACGGAGCGGCACAGGCCGTGCTaGCACACGGTGCAGGACTTGCAGCCTGGTGACACC +
Preference number: 6 (lower is better)
Translates to: TLSFSTERHRPC*HTVQDLQPGDT
Trigger: GGTGTCACCAGGCTGCAAGTCCTGCACCGTGTGCAAGCACGGCCTGTGCCGCTCCGTGGAGAAGGACAGCGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 90 bp GTCACATCCTTGGGCATGCCTCTGGGGAGGGCGCGGAGCCCCTTGTaGCTGCATCGCACCACTGTCTCCATACAGGTGCACTGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: VTSLGMPLGRARSPL*LHRTTVSIQVHCSG
Trigger: CCCGGAGCAGTGCACCTGTATGGAGACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCGCCCTCCCCAGAGGCATGCCCAAGGATGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS TCA 72 bp GCCGGGCTGGCACAGGCAGTAGGGCTCCCCTTGGTCTaGGATGTGGCACTGCCCATGGTGACACTTGAAGGC +
Preference number: 6 (lower is better)
Translates to: AGLAQAVGLPLV*DVALPMVTLEG
Trigger: GCCTTCAAGTGTCACCATGGGCAGTGCCACATCTCAGACCAAGGGGAGCCCTACTGCCTGTGCCAGCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp TGGGCATGCCTCTGGGGAGGGCGCGGAGCCCCTTGTTaGTGCATCGCACCACTGTCTCCATACAGGTGCACT +
Preference number: 6 (lower is better)
Translates to: WACLWGGRGAPC*CIAPLSPYRCT
Trigger: AGTGCACCTGTATGGAGACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCGCCCTCCCCAGAGGCATGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp ACCCCGCCTTCACCCACTCCGACAGCCACCGAAGACTaGAGTCACAGTGGAGTGGGTTGGTTCCCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: TPPSPTPTATED*SHSGVGWFPAP
Trigger: TGGCGCTGGGAACCAACCCACTCCACTGTGACTGCAGTCTTCGGTGGCTGTCGGAGTGGGTGAAGGCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp TGCTGGGCCCGGGGTCTGGGGCAGCTAACCAGGCTTTaGAGGTGCAAAGGAATCTCCTCGACCCTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: CWARGLGQLTRL*RCKGISSTLAP
Trigger: AGGAGCCAGGGTCGAGGAGATTCCTTTGCACCTGCAAAGCCTGGTTAGCTGCCCCAGACCCCGGGCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp GGTGGTTTCCTTCCAGGTACAGCTCGGTCACATCCTTaGGCATGCCTCTGGGGAGGGCGCGGAGCCCCTTGT +
Preference number: 6 (lower is better)
Translates to: GGFLPGTARSHP*ACLWGGRGAPC
Trigger: ACAAGGGGCTCCGCGCCCTCCCCAGAGGCATGCCCAAGGATGTGACCGAGCTGTACCTGGAAGGAAACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp CCACCTGCAGGGAGATGTTGGCCTGGGGTCGGACCTTaGCGGAGGCCAGTTCCACGTAGGAGTCTTTGCCCA +
Preference number: 6 (lower is better)
Translates to: PPAGRCWPGVGP*RRPVPRRSLCP
Trigger: TGGGCAAAGACTCCTACGTGGAACTGGCCTCCGCCAAGGTCCGACCCCAGGCCAACATCTCCCTGCAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp GATGTCCACTGGCCCTTTGCACTGGAAGCGGTGGGTTaGGGTGGTGAGCAGGAGCCTGTCAGCCATGGGCTC +
Preference number: 6 (lower is better)
Translates to: DVHWPFALEAVG*GGEQEPVSHGL
Trigger: GAGCCCATGGCTGACAGGCTCCTGCTCACCACCCCAACCCACCGCTTCCAGTGCAAAGGGCCAGTGGACATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS CAA 72 bp TTGGGCATGCCTCTGGGGAGGGCGCGGAGCCCCTTGTaGCTGCATCGCACCACTGTCTCCATACAGGTGCAC +
Preference number: 6 (lower is better)
Translates to: LGMPLGRARSPL*LHRTTVSIQVH
Trigger: GTGCACCTGTATGGAGACAGTGGTGCGATGCAGCAACAAGGGGCTCCGCGCCCTCCCCAGAGGCATGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp AGGTGGTTTCCTTCCAGGTACAGCTCGGTCACATCCTaGGGCATGCCTCTGGGGAGGGCGCGGAGCCCCTTG +
Preference number: 6 (lower is better)
Translates to: RWFPSRYSSVTS*GMPLGRARSPL
Trigger: CAAGGGGCTCCGCGCCCTCCCCAGAGGCATGCCCAAGGATGTGACCGAGCTGTACCTGGAAGGAAACCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp ATGCTGGGCCCGGGGTCTGGGGCAGCTAACCAGGCTTaGCAGGTGCAAAGGAATCTCCTCGACCCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: MLGPGSGAANQA*QVQRNLLDPGS
Trigger: GGAGCCAGGGTCGAGGAGATTCCTTTGCACCTGCAAAGCCTGGTTAGCTGCCCCAGACCCCGGGCCCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp CCAGCTGGTTCCCTGTCAGCATCAGCTCCTGCACGCTaGCTGCTCCATCGAAAGCTCCCTCTCGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: PAGSLSASAPAR*LLHRKLPLAPP
Trigger: AGGAGGTGCGAGAGGGAGCTTTCGATGGAGCAGCCAGCGTGCAGGAGCTGATGCTGACAGGGAACCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS CCA 72 bp ATACAGGTGCACTGCTCCGGGCAGCGCGGGCTCAGCTaGCAGCTACTCTCCTCGTTGCCATCACAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: IQVHCSGQRGLS*QLLSSLPSQVK
Trigger: CTTCACCTGTGATGGCAACGAGGAGAGTAGCTGCCAGCTGAGCCCGCGCTGCCCGGAGCAGTGCACCTGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp CGGAGGGCGGACAGCTCTCTGGGCACGGCTGTTAGGTaGTTTCCTTCCAGGTACAGCTCGGTCACATCCTTG +
Preference number: 6 (lower is better)
Translates to: RRADSSLGTAVR*FPSRYSSVTSL
Trigger: CAAGGATGTGACCGAGCTGTACCTGGAAGGAAACCACCTAACAGCCGTGCCCAGAGAGCTGTCCGCCCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp CAGGGGACGCCTTGGAGATGTGGGCTTGTCACTGGCTaGCAGTGTGTTCCTCATCTGGGAGCAAGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: QGTPWRCGLVTG*QCVPHLGASPG
Trigger: CCCTGGACTTGCTCCCAGATGAGGAACACACTGCCAGCCAGTGACAAGCCCACATCTCCAAGGCGTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp AGCGCTGCAGAGTGGGATCCCAGAGTCCGTGGGCAGTaGACCCAGGAGAACTTACATGGTGGACAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: SAAEWDPRVRGQ*TQENLHGGQGD
Trigger: GTCTCCCTGTCCACCATGTAAGTTCTCCTGGGTCCACTGCCCACGGACTCTGGGATCCCACTCTGCAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp TCAGGGAGGTGGCTTGGGATGCGGACCAGCTTCTGGTaGGAGCAGTCCACAATCGTGCCCTCACAGCGACAC +
Preference number: 6 (lower is better)
Translates to: SGRWLGMRTSFW*EQSTIVPSQRH
Trigger: GTGTCGCTGTGAGGGCACGATTGTGGACTGCTCCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS GCA 72 bp CTGGTTCCCTGTCAGCATCAGCTCCTGCACGCTGGCTaGTCCATCGAAAGCTCCCTCTCGCACCTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: LVPCQHQLLHAG*SIESSLSHLLD
Trigger: ATCAAGGAGGTGCGAGAGGGAGCTTTCGATGGAGCAGCCAGCGTGCAGGAGCTGATGCTGACAGGGAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS GCA 72 bp ACCCCCAGGGACTGTGGTGGGAGGGCCTTGAAGTCCTaGAGCTCGTTGTTGATGCGCACCTCATGGATGCAT +
Preference number: 6 (lower is better)
Translates to: TPRDCGGRALKS*SSLLMRTSWMH
Trigger: ATGCATCCATGAGGTGCGCATCAACAACGAGCTGCAGGACTTCAAGGCCCTCCCACCACAGTCCCTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp CTGTCCTCCAGATTGGATTATTGGCCTCTCTGGGGCTaGTGCATTCTGAGTCAGAAAGCGGGGCCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: LSSRLDYWPLWG*CILSQKAGPSP
Trigger: GGGGCTGGGCCCCGCTTTCTGACTCAGAATGCAGCAGCCCCAGAGAGGCCAATAATCCAATCTGGAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS CCA 72 bp CCCCTCAAATGCACAGGAGCCATGCAGAGTGTGAACTaGCCAACTGTCCGTCGCTGTCGCAGCCAATCCGAG +
Preference number: 6 (lower is better)
Translates to: PLKCTGAMQSVN*PTVRRCRSQSE
Trigger: CTCGGATTGGCTGCGACAGCGACGGACAGTTGGCCAGTTCACACTCTGCATGGCTCCTGTGCATTTGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS CCA 72 bp CAGTCGCAGGTCGGTGACATATTCAGGGAGGTGGCTTaGGATGCGGACCAGCTTCTGGTTGGAGCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: QSQVGDIFREVA*DADQLLVGAVH
Trigger: GTGGACTGCTCCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAATATGTCACCGACCTGCGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS CCA 72 bp GCAAAACCAGAGTACTTTGCACTGGAAGCGGTGGGTTaGGGTGGTGAGCAGGAGCCTGTCAGCCATGGGCTC +
Preference number: 6 (lower is better)
Translates to: AKPEYFALEAVG*GGEQEPVSHGL
Trigger: GAGCCCATGGCTGACAGGCTCCTGCTCACCACCCCAACCCACCGCTTCCAGTGCAAAGTACTCTGGTTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS CCA 72 bp GGGCAGCAAAACCAGAGTACTTTGCACTGGAAGCGGTaGGTTGGGGTGGTGAGCAGGAGCCTGTCAGCCATG +
Preference number: 6 (lower is better)
Translates to: GQQNQSTLHWKR*VGVVSRSLSAM
Trigger: CATGGCTGACAGGCTCCTGCTCACCACCCCAACCCACCGCTTCCAGTGCAAAGTACTCTGGTTTTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS CCA 72 bp ATTGTGTCCACGCACTGGGCCCCGTGGCGGCACTTGTaGGCCACACAGTCATCATTGTCTGTCTCACAGAGC +
Preference number: 6 (lower is better)
Translates to: IVSTHWAPWRHL*ATQSSLSVSQS
Trigger: GCTCTGTGAGACAGACAATGATGACTGTGTGGCCCACAAGTGCCGCCACGGGGCCCAGTGCGTGGACACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS CCA 72 bp AGGAGAGAGCGCTGCAGAGTGGGATCCCAGAGTCCGTaGGCAGTGGACCCAGGAGAACTTACATGGTGGACA +
Preference number: 6 (lower is better)
Translates to: RRERCRVGSQSP*AVDPGELTWWT
Trigger: TGTCCACCATGTAAGTTCTCCTGGGTCCACTGCCCACGGACTCTGGGATCCCACTCTGCAGCGCTCTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp ATGTTGATGTCCACTGGCCCTTTGCACTGGAAGCGGTaGGTTGGGGTGGTGAGCAGGAGCCTGTCAGCCATG +
Preference number: 6 (lower is better)
Translates to: MLMSTGPLHWKR*VGVVSRSLSAM
Trigger: CATGGCTGACAGGCTCCTGCTCACCACCCCAACCCACCGCTTCCAGTGCAAAGGGCCAGTGGACATCAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS CAA 72 bp CCTGGGATTCTCAGGGGACGCCTTGGAGATGTGGGCTaGTCACTGGCTGGCAGTGTGTTCCTCATCTGGGAG +
Preference number: 6 (lower is better)
Translates to: PGILRGRLGDVG*SLAGSVFLIWE
Trigger: CTCCCAGATGAGGAACACACTGCCAGCCAGTGACAAGCCCACATCTCCAAGGCGTCCCCTGAGAATCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 90 bp CAGGTGGCATTGTTTTCGCAGTCGTTGTCCTCACAGTCATCTGGGTaGATCTCACACCGCTGCCCCTCAAAGCCCAGAGGGCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: QVALFSQSLSSQSSG*ISHRCPSKPRGQEQ
Trigger: CTGCTCCTGCCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGAGGACAACGACTGCGAAAACAATGCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 90 bp ATTCTATTAATGCTGGGCCCGGGGTCTGGGGCAGCTAACCAGGCTTaGCAGGTGCAAAGGAATCTCCTCGACCCTGGCTCCTTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: ILLMLGPGSGAANQA*QVQRNLLDPGSFPE
Trigger: CTCTGGGAAGGAGCCAGGGTCGAGGAGATTCCTTTGCACCTGCAAAGCCTGGTTAGCTGCCCCAGACCCCGGGCCCAGCATTAATAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS TCA 72 bp TGTGGTTGTTGTCCAGTTGCAGGTTCTTCACATCGGTaGTGCCGCGGAACGCCTTCCTCGGGATCCCCTGGA +
Preference number: 6 (lower is better)
Translates to: CGCCPVAGSSHR*CRGTPSSGSPG
Trigger: TCCAGGGGATCCCGAGGAAGGCGTTCCGCGGCATCACCGATGTGAAGAACCTGCAACTGGACAACAACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
CDS CCA 72 bp TATTCAGGGAGGTGGCTTGGGATGCGGACCAGCTTCTaGTTGGAGCAGTCCACAATCGTGCCCTCACAGCGA +
Preference number: 6 (lower is better)
Translates to: YSGRWLGMRTSF*LEQSTIVPSQR
Trigger: TCGCTGTGAGGGCACGATTGTGGACTGCTCCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS CCA 72 bp CTCCGACAGCCACCGAAGACTGCAGTCACAGTGGAGTaGGTTGGTTCCCAGCGCCAGATGGGAAAGAGATGT +
Preference number: 6 (lower is better)
Translates to: LRQPPKTAVTVE*VGSQRQMGKRC
Trigger: ACATCTCTTTCCCATCTGGCGCTGGGAACCAACCCACTCCACTGTGACTGCAGTCTTCGGTGGCTGTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp TTCTCAGGGGACGCCTTGGAGATGTGGGCTTGTCACTaGCTGGCAGTGTGTTCCTCATCTGGGAGCAAGTCC +
Preference number: 6 (lower is better)
Translates to: FSGDALEMWACH*LAVCSSSGSKS
Trigger: GGACTTGCTCCCAGATGAGGAACACACTGCCAGCCAGTGACAAGCCCACATCTCCAAGGCGTCCCCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp GACAGCCACCGAAGACTGCAGTCACAGTGGAGTGGGTaGGTTCCCAGCGCCAGATGGGAAAGAGATGTGAGG +
Preference number: 6 (lower is better)
Translates to: DSHRRLQSQWSG*VPSARWERDVR
Trigger: CCTCACATCTCTTTCCCATCTGGCGCTGGGAACCAACCCACTCCACTGTGACTGCAGTCTTCGGTGGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp TTGATTGTGTCCACGCACTGGGCCCCGTGGCGGCACTaGTGGGCCACACAGTCATCATTGTCTGTCTCACAG +
Preference number: 6 (lower is better)
Translates to: LIVSTHWAPWRH*WATQSSLSVSQ
Trigger: CTGTGAGACAGACAATGATGACTGTGTGGCCCACAAGTGCCGCCACGGGGCCCAGTGCGTGGACACAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518092.1
ENST00000519560.6
CDS CAA 90 bp TGGGTGCATGTCCCGTTATTCTTGCACGGGCTGGAGAGGCAGGCATaGCATTTGGCCACAATGTTGATGTCCACTGGCCCTGGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: WVHVPLFLHGLERQA*HLATMLMSTGPGQQ
Trigger: TTGCTGCCCAGGGCCAGTGGACATCAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATAACGGGACATGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS TCA 72 bp GGCACACGTACTCCTTCTTCTGCACATCCGCCACGTTaGAGCCCCTCAAATGCACAGGAGCCATGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: GTRTPSSAHPPR*SPSNAQEPCRV
Trigger: CACTCTGCATGGCTCCTGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGCAGAAGAAGGAGTACGTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS TCA 72 bp TGTTTTCGCAGTCGTTGTCCTCACAGTCATCTGGGTTaGTCTCACACCGCTGCCCCTCAAAGCCCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: CFRSRCPHSHLG*SHTAAPQSPEG
Trigger: GCCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGAGGACAACGACTGCGAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp GTGCCAGGGGGTCATTGTCTCCTTTGTAGAGAAGGATaGCGTTGTCCTTGTCAGTGGCCACCTGCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: VPGGHCLLCREG*RCPCQWPPAGR
Trigger: TCTCCCTGCAGGTGGCCACTGACAAGGACAACGGCATCCTTCTCTACAAAGGAGACAATGACCCCCTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp AGGTCCTGGAAGGCGCCTCTCTCGATGACGCTGACCTaGTTGTCTTCCAGATGCAAGACTCGGAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: RSWKAPLSMTLT*LSSRCKTRRFL
Trigger: CAAGAACCTCCGAGTCTTGCATCTGGAAGACAACCAGGTCAGCGTCATCGAGAGAGGCGCCTTCCAGGACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
ENST00000521130.1
CDS CCA 72 bp TCATTCAGTCGCAGGTCGGTGACATATTCAGGGAGGTaGCTTGGGATGCGGACCAGCTTCTGGTTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SFSRRSVTYSGR*LGMRTSFWLEQ
Trigger: CTGCTCCAACCAGAAGCTGGTCCGCATCCCAAGCCACCTCCCTGAATATGTCACCGACCTGCGACTGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS CCA 72 bp GTGGGCTTGTCACTGGCTGGCAGTGTGTTCCTCATCTaGGAGCAAGTCCAGGGCATAAGAATGTCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: VGLSLAGSVFLI*EQVQGIRMSQA
Trigger: AGCCTGGGACATTCTTATGCCCTGGACTTGCTCCCAGATGAGGAACACACTGCCAGCCAGTGACAAGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp TCCTGGAAGGCGCCTCTCTCGATGACGCTGACCTGGTaGTCTTCCAGATGCAAGACTCGGAGGTTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: SWKAPLSMTLTW*SSRCKTRRFLS
Trigger: GCTCAAGAACCTCCGAGTCTTGCATCTGGAAGACAACCAGGTCAGCGTCATCGAGAGAGGCGCCTTCCAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
ENST00000521130.1
CDS CAA 72 bp GGGCACACGTACTCCTTCTTCTGCACATCCGCCACGTaGAAGCCCCTCAAATGCACAGGAGCCATGCAGAGT +
Preference number: 6 (lower is better)
Translates to: GHTYSFFCTSAT*KPLKCTGAMQS
Trigger: ACTCTGCATGGCTCCTGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGCAGAAGAAGGAGTACGTGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS CAA 72 bp TCGTTGAAGGAGCCTTCAGGAACGCTGGAAATGTCATaGCCATGGAGGGTTAGCACTCGCAGGGACCGCAGC +
Preference number: 6 (lower is better)
Translates to: SLKEPSGTLEMS*PWRVSTRRDRS
Trigger: GCTGCGGTCCCTGCGAGTGCTAACCCTCCATGGCAATGACATTTCCAGCGTTCCTGAAGGCTCCTTCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp CCCCAGGAGCCATTACAGTGCTCGCTGTCCTCCAGATaGGATTATTGGCCTCTCTGGGGCTGCTGCATTCTG +
Preference number: 6 (lower is better)
Translates to: PQEPLQCSLSSR*DYWPLWGCCIL
Trigger: CAGAATGCAGCAGCCCCAGAGAGGCCAATAATCCAATCTGGAGGACAGCGAGCACTGTAATGGCTCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS CAA 90 bp CATGTCCCGTTATTCTTGCACGGGCTGGAGAGGCAGGCATTGCATTaGGCCACAATGTTGATGTCCACTGGCCCTGGGCAGCAAAACCAG +
Preference number: 6 (lower is better)
Translates to: HVPLFLHGLERQALH*ATMLMSTGPGQQNQ
Trigger: CTGGTTTTGCTGCCCAGGGCCAGTGGACATCAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATAACGGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS CAA 90 bp CATGTCCCGTTATTCTTGCACGGGCTGGAGAGGCAGGCATTGCATTaGGCCACAATGTTGATGTCCACTGGCCCTTTGCACTGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: HVPLFLHGLERQALH*ATMLMSTGPLHWKR
Trigger: CCGCTTCCAGTGCAAAGGGCCAGTGGACATCAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATAACGGGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS CAA 90 bp TGGGTGCATGTCCCGTTATTCTTGCACGGGCTGGAGAGGCAGGCATaGCATTTGGCCACAATGTTGATGTCCACTGGCCCTTTGCACTGG +
Preference number: 6 (lower is better)
Translates to: WVHVPLFLHGLERQA*HLATMLMSTGPLHW
Trigger: CCAGTGCAAAGGGCCAGTGGACATCAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATAACGGGACATGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS TCA 72 bp ACATTCCATGATGGGCACCTTGGAGGCTGTGGCACATaGTGCATAACCTTTCTGGCGGCGGATCACCTCTCG +
Preference number: 6 (lower is better)
Translates to: TFHDGHLGGCGT*CITFLAADHLS
Trigger: CGAGAGGTGATCCGCCGCCAGAAAGGTTATGCATCATGTGCCACAGCCTCCAAGGTGCCCATCATGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CCA 72 bp TTGGAGTGGAGGCGCAGAGTTCGGATCTTCGGCATGTaGTTGAAGCTGGTGACCAGGATGCGACTGATGTTG +
Preference number: 6 (lower is better)
Translates to: LEWRRRVRIFGM*LKLVTRMRLML
Trigger: CAACATCAGTCGCATCCTGGTCACCAGCTTCAACCACATGCCGAAGATCCGAACTCTGCGCCTCCACTCCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS CCA 72 bp GGCATTGTTTTCGCAGTCGTTGTCCTCACAGTCATCTaGGTTGATCTCACACCGCTGCCCCTCAAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: GIVFAVVVLTVI*VDLTPLPLKAQ
Trigger: CTGGGCTTTGAGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGAGGACAACGACTGCGAAAACAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp TTATTCTTGCACGGGCTGGAGAGGCAGGCATTGCATTaGGCCACAATGTTGATGTCCACTGGCCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: LFLHGLERQALH*ATMLMSTGPGQ
Trigger: CTGCCCAGGGCCAGTGGACATCAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332966.8
ENST00000404867.7
CDS CAA 72 bp TTGTTTTCGCAGTCGTTGTCCTCACAGTCATCTGGGTaGATCTCACACCGCTGCCCCTCAAAGCCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: LFSQSLSSQSSG*ISHRCPSKPRG
Trigger: CCCTCTGGGCTTTGAGGGGCAGCGGTGTGAGATCAACCCAGATGACTGTGAGGACAACGACTGCGAAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp ATCCCGTCCACGCAGGTGGCATTGTTTTCGCAGTCGTaGTCCTCACAGTCATCTGGGTTGATCTCACACCGC +
Preference number: 6 (lower is better)
Translates to: IPSTQVALFSQS*SSQSSGLISHR
Trigger: GCGGTGTGAGATCAACCCAGATGACTGTGAGGACAACGACTGCGAAAACAATGCCACCTGCGTGGACGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp AGCCCTCGGCACACTTGCACATGTATGAGGTCCCAGTaGCCACACATTTTCCATGGTGGCATCTGTGGCCGA +
Preference number: 6 (lower is better)
Translates to: SPRHTCTCMRSQ*PHIFHGGICGR
Trigger: TCGGCCACAGATGCCACCATGGAAAATGTGTGGCAACTGGGACCTCATACATGTGCAAGTGTGCCGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp ATAACCTTTCTGGCGGCGGATCACCTCTCGGACTACTaGTCCCAGGCACGGATTCTCTTGTTGGCAGTGCTC +
Preference number: 6 (lower is better)
Translates to: ITFLAADHLSDY*SQARILLLAVL
Trigger: GAGCACTGCCAACAAGAGAATCCGTGCCTGGGACAAGTAGTCCGAGAGGTGATCCGCCGCCAGAAAGGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 90 bp CGCTTCAGTTTCTTGTACTGGGTGAAGGCTCCTGCAGGGATGGCTTaGATGGAGTTCTGTTCTAGGCGTATTTCGACGATGCCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: RFSFLYWVKAPAGMA*MEFCSRRISTMPSG
Trigger: GCCGGAGGGCATCGTCGAAATACGCCTAGAACAGAACTCCATCAAAGCCATCCCTGCAGGAGCCTTCACCCAGTACAAGAAACTGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS CAA 90 bp AGTGGGTTGGTTCCCAGCGCCAGATGGGAAAGAGATGTGAGGTCGTaGAAGGAGCCTTCAGGAACGCTGGAAATGTCATTGCCATGGAGG +
Preference number: 6 (lower is better)
Translates to: SGLVPSARWERDVRS*KEPSGTLEMSLPWR
Trigger: CCTCCATGGCAATGACATTTCCAGCGTTCCTGAAGGCTCCTTCAACGACCTCACATCTCTTTCCCATCTGGCGCTGGGAACCAACCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS TCA 72 bp CTGAGGCTGCTCAATTACGGGCATCCCAGTGACTTCTaGGAACCTGGACACCAGCTCTTGCTAATGGCCCTT +
Preference number: 6 (lower is better)
Translates to: LRLLNYGHPSDF*EPGHQLLLMAL
Trigger: AAGGGCCATTAGCAAGAGCTGGTGTCCAGGTTCTCAGAAGTCACTGGGATGCCCGTAATTGAGCAGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 72 bp TTCTTCTGCACATCCGCCACGTTGAAGCCCCTCAAATaGACAGGAGCCATGCAGAGTGTGAACTGGCCAACT +
Preference number: 6 (lower is better)
Translates to: FFCTSATLKPLK*TGAMQSVNWPT
Trigger: AGTTGGCCAGTTCACACTCTGCATGGCTCCTGTGCATTTGAGGGGCTTCAACGTGGCGGATGTGCAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS CCA 72 bp GTTCTAGGCGTATTTCGACGATGCCCTCCGGCAAGTTaGCAGGAATCTCCATCAAGCCCTTTCCTCGACAGT +
Preference number: 6 (lower is better)
Translates to: VLGVFRRCPPAS*QESPSSPFLDS
Trigger: ACTGTCGAGGAAAGGGCTTGATGGAGATTCCTGCCAACTTGCCGGAGGGCATCGTCGAAATACGCCTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS CCA 72 bp AGCCACTTCAAGTGGCAGTCGCACACAAATGGGTTTTaGGCTAAGTGGAGTGTCTGGATGGACTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: SHFKWQSHTNGF*AKWSVWMDCRG
Trigger: CCCTCTGCAGTCCATCCAGACACTCCACTTAGCCCAAAACCCATTTGTGTGCGACTGCCACTTGAAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519486.5
ENST00000519560.6
CDS CCA 72 bp GCCCTGAGAGGTGAAGTACCTGGAGCCATAAGTGACTaGACACAGCCATTTGGGCACAGAGCAAGCATCTCA +
Preference number: 6 (lower is better)
Translates to: ALRGEVPGAISD*TQPFGHRASIS
Trigger: TGAGATGCTTGCTCTGTGCCCAAATGGCTGTGTCCAGTCACTTATGGCTCCAGGTACTTCACCTCTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp ACCTGGTTGTCTTCCAGATGCAAGACTCGGAGGTTCTaGAGCCCAGCGAAGTCCATCTTGGTGATCCTGGTG +
Preference number: 6 (lower is better)
Translates to: TWLSSRCKTRRF*SPAKSILVILV
Trigger: CACCAGGATCACCAAGATGGACTTCGCTGGGCTCAAGAACCTCCGAGTCTTGCATCTGGAAGACAACCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
ENST00000521130.1
CDS CAA 72 bp TGTTCTAGGCGTATTTCGACGATGCCCTCCGGCAAGTaGGCAGGAATCTCCATCAAGCCCTTTCCTCGACAG +
Preference number: 6 (lower is better)
Translates to: CSRRISTMPSGK*AGISIKPFPRQ
Trigger: CTGTCGAGGAAAGGGCTTGATGGAGATTCCTGCCAACTTGCCGGAGGGCATCGTCGAAATACGCCTAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS CAA 72 bp TGGGAGCAAGTCCAGGGCATAAGAATGTCCCAGGCTTaGGATAATGAGAGCAAGAGGGATGCTGTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: WEQVQGIRMSQA*DNESKRDAVGQ
Trigger: CTGGCCCACAGCATCCCTCTTGCTCTCATTATCCAAAGCCTGGGACATTCTTATGCCCTGGACTTGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 72 bp TGTCACACAAGTCCCCTCCATAGCCCTCGGCACACTTaGACATGTATGAGGTCCCAGTTGCCACACATTTTC +
Preference number: 6 (lower is better)
Translates to: CHTSPLHSPRHT*TCMRSQLPHIF
Trigger: GAAAATGTGTGGCAACTGGGACCTCATACATGTGCAAGTGTGCCGAGGGCTATGGAGGGGACTTGTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS GCA 72 bp TCCAGCGAAGCCAGACACTCCAGCCTCTTAAGCACATaGAGTGGGAATCTCTCTGAGCCTGTTTCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: SSEARHSSLLST*SGNLSEPVSFL
Trigger: AAGGAAGGAAACAGGCTCAGAGAGATTCCCACTGCATGTGCTTAAGAGGCTGGAGTGTCTGGCTTCGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 72 bp GGATGGCCTCTGGGATCCTGTCACTGGAAGGAGAGATaGTCCAATTTCCTGCGACATCAAACCTCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: GWPLGSCHWKER*SNFLRHQTSPV
Trigger: AACTGGAGAGGTTTGATGTCGCAGGAAATTGGAGCATCTCTCCTTCCAGTGACAGGATCCCAGAGGCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp GAACCTATAACATACTGTGGTCAAAGGGCTGTACCATaGTCTGTCTCCGAAGGGAGTGGGAGGTCCCCAAGA +
Preference number: 6 (lower is better)
Translates to: EPITYCGQRAVP*SVSEGSGRSPR
Trigger: TCTTGGGGACCTCCCACTCCCTTCGGAGACAGACCATGGTACAGCCCTTTGACCACAGTATGTTATAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS CCA 72 bp TCCACACTGGGCAGTCTGGTGAGCTTCGGCGTGCTCTaGAAAAGCAATTCTGGAAGGACTTGCAGCTTATTC +
Preference number: 6 (lower is better)
Translates to: STLGSLVSFGVL*KSNSGRTCSLF
Trigger: GAATAAGCTGCAAGTCCTTCCAGAATTGCTTTTCCAGAGCACGCCGAAGCTCACCAGACTGCCCAGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521130.1
CDS CAA 72 bp GTTCCCAGCGCCAGATGGGAAAGAGATGTGAGGTCGTaGAAGGAGCCTTCAGGAACGCTGGAAATGTCATTG +
Preference number: 6 (lower is better)
Translates to: VPSARWERDVRS*KEPSGTLEMSL
Trigger: CAATGACATTTCCAGCGTTCCTGAAGGCTCCTTCAACGACCTCACATCTCTTTCCCATCTGGCGCTGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519560.6
CDS CAA 72 bp CAACCACAAGCCAGGGTTCCTGTAGGCATCATCTTCTaGCCTCATGCCTCAGCAGCTGCTCATTTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: QPQARVPVGIIF*PHASAAAHFSP
Trigger: GGGAGAAAAATGAGCAGCTGCTGAGGCATGAGGCAAGAAGATGATGCCTACAGGAACCCTGGCTTGTGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp TTATTCTTGCACGGGCTGGAGAGGCAGGCATTGCATTaGGCCACAATGTTGATGTCCACTGGCCCTTTGCAC +
Preference number: 6 (lower is better)
Translates to: LFLHGLERQALH*ATMLMSTGPLH
Trigger: GTGCAAAGGGCCAGTGGACATCAACATTGTGGCCAAATGCAATGCCTGCCTCTCCAGCCCGTGCAAGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519560.6
CDS CAA 72 bp GCCATTACAGTGCTCGCTGTCCTCCAGATTGGATTATaGGCCTCTCTGGGGCTGCTGCATTCTGAGTCAGAA +
Preference number: 6 (lower is better)
Translates to: AITVLAVLQIGL*ASLGLLHSESE
Trigger: TTCTGACTCAGAATGCAGCAGCCCCAGAGAGGCCAATAATCCAATCTGGAGGACAGCGAGCACTGTAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS CAA 90 bp TCACCCAACCAACCACAAGCCAGGGTTCCTGTAGGCATCATCTTCTaGCCTCATGCCTCAGCAGCTGCTCATTTTTCTCCCAGAAAGTCC +
Preference number: 6 (lower is better)
Translates to: SPNQPQARVPVGIIF*PHASAAAHFSPRKS
Trigger: GGACTTTCTGGGAGAAAAATGAGCAGCTGCTGAGGCATGAGGCAAGAAGATGATGCCTACAGGAACCCTGGCTTGTGGTTGGTTGGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 90 bp AAAGATGCTCCCCAGGAGCCATTACAGTGCTCGCTGTCCTCCAGATaGGATTATTGGCCTCTCTGGGGCTGCTGCATTCTGAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: KDAPQEPLQCSLSSR*DYWPLWGCCILSQK
Trigger: TTTCTGACTCAGAATGCAGCAGCCCCAGAGAGGCCAATAATCCAATCTGGAGGACAGCGAGCACTGTAATGGCTCCTGGGGAGCATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS CAA 90 bp TCCAGATGCAAGACTCGGAGGTTCTTGAGCCCAGCGAAGTCCATCTaGGTGATCCTGGTGATATTATTTCTGTCCAGGTCAAGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: SRCKTRRFLSPAKSI*VILVILFLSRSRRS
Trigger: TGAGCGCCTTGACCTGGACAGAAATAATATCACCAGGATCACCAAGATGGACTTCGCTGGGCTCAAGAACCTCCGAGTCTTGCATCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
ENST00000521130.1
CDS CAA 90 bp TCCTGCACGCTGGCTGCTCCATCGAAAGCTCCCTCTCGCACCTCCTaGATCTTATTGTTACTCAGATTTATTTTCCGCAGGTTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: SCTLAAPSKAPSRTS*ILLLLRFIFRRLGN
Trigger: GTTGCCCAACCTGCGGAAAATAAATCTGAGTAACAATAAGATCAAGGAGGTGCGAGAGGGAGCTTTCGATGGAGCAGCCAGCGTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS CAA 90 bp GTTTATCCCTTTAGCTGGCGAAATCACCTCCGACAAATCCGCAGATaGCACTCACAAACTCGTCAGCTTACACCGGGCTTTTCTTCCGCG +
Preference number: 6 (lower is better)
Translates to: VYPFSWRNHLRQIRR*HSQTRQLTPGFSSA
Trigger: CGCGGAAGAAAAGCCCGGTGTAAGCTGACGAGTTTGTGAGTGCAATCTGCGGATTTGTCGGAGGTGATTTCGCCAGCTAAAGGGATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS TCA 72 bp GCTCCTAGAACTGATTCTGGGCACTGGGATGACTCTTaGCCAGTGCTTCTCAAACCTCACGAGGGTGTAGAT +
Preference number: 6 (lower is better)
Translates to: APRTDSGHWDDS*PVLLKPHEGVD
Trigger: ATCTACACCCTCGTGAGGTTTGAGAAGCACTGGTCAAGAGTCATCCCAGTGCCCAGAATCAGTTCTAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 72 bp AGCATCTCAAGTCTCCTATCAGCTCAAGGCCCCCTCTaGTATTTTGTTGTGATGGAGGCACAATGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: SISSLLSAQGPL*YFVVMEAQCRA
Trigger: TGCCCTGCATTGTGCCTCCATCACAACAAAATAGCAGAGGGGGCCTTGAGCTGATAGGAGACTTGAGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp TCTGGTGAGCTTCGGCGTGCTCTGGAAAAGCAATTCTaGAAGGACTTGCAGCTTATTCTTGTTCAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: SGELRRALEKQF*KDLQLILVQAQ
Trigger: CTGCGCCTGAACAAGAATAAGCTGCAAGTCCTTCCAGAATTGCTTTTCCAGAGCACGCCGAAGCTCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
ENST00000521130.1
CDS CCA 72 bp CCATTACAGTGCTCGCTGTCCTCCAGATTGGATTATTaGCCTCTCTGGGGCTGCTGCATTCTGAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: PLQCSLSSRLDY*PLWGCCILSQK
Trigger: TTTCTGACTCAGAATGCAGCAGCCCCAGAGAGGCCAATAATCCAATCTGGAGGACAGCGAGCACTGTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS CAA 72 bp TTGAAGCTGGTGACCAGGATGCGACTGATGTTGTTGTaGTTGAGGGTAAGGATCTCCAAATCGCGCAGCGCT +
Preference number: 6 (lower is better)
Translates to: LKLVTRMRLMLL*LRVRISKSRSA
Trigger: AGCGCTGCGCGATTTGGAGATCCTTACCCTCAACAACAACAACATCAGTCGCATCCTGGTCACCAGCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS TCA 72 bp TACTTCCTCCCCTCCCTGCCTCCAAAGCCTGTACTTTaGACGATATTTCACAGGTTAAGGCTCTTCGGCACA +
Preference number: 6 (lower is better)
Translates to: YFLPSLPPKPVL*TIFHRLRLFGT
Trigger: TGTGCCGAAGAGCCTTAACCTGTGAAATATCGTTCAAAGTACAGGCTTTGGAGGCAGGGAGGGGAGGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS TCA 72 bp ACTCACCCGTGGCATCTTCATCGGGACACGAGGCTGTaGACACGTGAACCATCACTTTGTAGGTGGAAAATT +
Preference number: 6 (lower is better)
Translates to: THPWHLHRDTRL*TREPSLCRWKI
Trigger: AATTTTCCACCTACAAAGTGATGGTTCACGTGTTCACAGCCTCGTGTCCCGATGAAGATGCCACGGGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS TCA 72 bp AGGTCCCCAAGATTACACACCGTCTGTAGCCTCGCCTaGGCTATATGTATTTCTCTACTTGCCCTTTGGGGA +
Preference number: 6 (lower is better)
Translates to: RSPRLHTVCSLA*AICISLLALWG
Trigger: TCCCCAAAGGGCAAGTAGAGAAATACATATAGCTCAGGCGAGGCTACAGACGGTGTGTAATCTTGGGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS GCA 72 bp TTAGCTGGCGAAATCACCTCCGACAAATCCGCAGATTaGACTCACAAACTCGTCAGCTTACACCGGGCTTTT +
Preference number: 6 (lower is better)
Translates to: LAGEITSDKSAD*THKLVSLHRAF
Trigger: AAAAGCCCGGTGTAAGCTGACGAGTTTGTGAGTGCAATCTGCGGATTTGTCGGAGGTGATTTCGCCAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp CAGTATGAGGTGAGATGCCCCACGGTTTGGAGGTGCTaGAGAGTGGGAATTGGAGAAGTGATAGACAGTTTA +
Preference number: 6 (lower is better)
Translates to: QYEVRCPTVWRC*RVGIGEVIDSL
Trigger: TAAACTGTCTATCACTTCTCCAATTCCCACTCTCCAGCACCTCCAAACCGTGGGGCATCTCACCTCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp GAGGGCAAACTGGTTTTCAGTCCACAACTAGACTTCTaGACCCATCTCTCCCTACAGTATGAGGTGAGATGC +
Preference number: 6 (lower is better)
Translates to: EGKLVFSPQLDF*THLSLQYEVRC
Trigger: GCATCTCACCTCATACTGTAGGGAGAGATGGGTCCAGAAGTCTAGTTGTGGACTGAAAACCAGTTTGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp TTCTTGTACTGGGTGAAGGCTCCTGCAGGGATGGCTTaGATGGAGTTCTGTTCTAGGCGTATTTCGACGATG +
Preference number: 6 (lower is better)
Translates to: FLYWVKAPAGMA*MEFCSRRISTM
Trigger: CATCGTCGAAATACGCCTAGAACAGAACTCCATCAAAGCCATCCCTGCAGGAGCCTTCACCCAGTACAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519560.6
ENST00000521150.1
CDS CAA 72 bp TTTAGCTGGCGAAATCACCTCCGACAAATCCGCAGATaGCACTCACAAACTCGTCAGCTTACACCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: FSWRNHLRQIRR*HSQTRQLTPGF
Trigger: AAAGCCCGGTGTAAGCTGACGAGTTTGTGAGTGCAATCTGCGGATTTGTCGGAGGTGATTTCGCCAGCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS GCA 72 bp TTAATTTGCAAAGATGCTCCCCAGGAGCCATTACAGTaGTCGCTGTCCTCCAGATTGGATTATTGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: LICKDAPQEPLQ*SLSSRLDYWPL
Trigger: GAGAGGCCAATAATCCAATCTGGAGGACAGCGAGCACTGTAATGGCTCCTGGGGAGCATCTTTGCAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS GCA 72 bp GGGCTAACTGAATTTCCCCAATTTAATTTGCAAAGATaGTCCCCAGGAGCCATTACAGTGCTCGCTGTCCTC +
Preference number: 6 (lower is better)
Translates to: GLTEFPQFNLQR*SPGAITVLAVL
Trigger: GAGGACAGCGAGCACTGTAATGGCTCCTGGGGAGCATCTTTGCAAATTAAATTGGGGAAATTCAGTTAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS CAA 72 bp AAGACTCGGAGGTTCTTGAGCCCAGCGAAGTCCATCTaGGTGATCCTGGTGATATTATTTCTGTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: KTRRFLSPAKSI*VILVILFLSRS
Trigger: TGACCTGGACAGAAATAATATCACCAGGATCACCAAGATGGACTTCGCTGGGCTCAAGAACCTCCGAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
ENST00000521130.1
CDS CAA 72 bp AGCCCATCAAACAGTCCCTTGACAATCTCGGTGATCTaGTTCCCATACAGGACCAGCGATGTGAGTGATTTC +
Preference number: 6 (lower is better)
Translates to: SPSNSPLTISVI*FPYRTSDVSDF
Trigger: GAAATCACTCACATCGCTGGTCCTGTATGGGAACAAGATCACCGAGATTGTCAAGGGACTGTTTGATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000518140.5
ENST00000519486.5
ENST00000519560.6
ENST00000521150.1
CDS CAA 72 bp GCACAGTTGATCTTGATATTTGGTCAGAGTGCTCAGTaGCAGGGTGATGGTGCAAGTCTCAAAGGCAACAGG +
Preference number: 6 (lower is better)
Translates to: AQLILIFGQSAQ*QGDGASLKGNR
Trigger: CCTGTTGCCTTTGAGACTTGCACCATCACCCTGCAACTGAGCACTCTGACCAAATATCAAGATCAACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521130.1
CDS TCA 72 bp GATCTTGATATTTGGTCAGAGTGCTCAGTTGCAGGGTaGTGGTGCAAGTCTCAAAGGCAACAGGGACCAAAT +
Preference number: 6 (lower is better)
Translates to: DLDIWSECSVAG*WCKSQRQQGPN
Trigger: ATTTGGTCCCTGTTGCCTTTGAGACTTGCACCATCACCCTGCAACTGAGCACTCTGACCAAATATCAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521130.1
CDS GCA 72 bp CTGGATTATCCTAATCTCACTTGCCCTCAGCATGGCTaGCTATGCAAAGCATTCCAGACAAACACGAAGGAT +
Preference number: 6 (lower is better)
Translates to: LDYPNLTCPQHG*LCKAFQTNTKD
Trigger: ATCCTTCGTGTTTGTCTGGAATGCTTTGCATAGGCAGCCATGCTGAGGGCAAGTGAGATTAGGATAATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp TCACTCAAATCTAGTCTGGTGAGCTTCGGCGTGCTCTaGAAAAGCAATTCTGGAAGGACTTGCAGCTTATTC +
Preference number: 6 (lower is better)
Translates to: SLKSSLVSFGVL*KSNSGRTCSLF
Trigger: GAATAAGCTGCAAGTCCTTCCAGAATTGCTTTTCCAGAGCACGCCGAAGCTCACCAGACTAGATTTGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332966.8
ENST00000518140.5
ENST00000519560.6
CDS CAA 72 bp CCATCGAAAGCTCCCTCTCGCACCTCCTTGATCTTATaGTTACTCAGATTTATTTTCCGCAGGTTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: PSKAPSRTSLIL*LLRFIFRRLGN
Trigger: GTTGCCCAACCTGCGGAAAATAAATCTGAGTAACAATAAGATCAAGGAGGTGCGAGAGGGAGCTTTCGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332966.8
ENST00000404867.7
ENST00000519486.5
ENST00000519560.6
CDS TCA 72 bp GAACACGTGCTTTGTAGAAATCCTGTAGGAGGGATGTaGTTTCTGTCTAGTGCCATCCAACAGAGTTCCACA +
Preference number: 6 (lower is better)
Translates to: EHVLCRNPVGGM*FLSSAIQQSST
Trigger: TGTGGAACTCTGTTGGATGGCACTAGACAGAAATCACATCCCTCCTACAGGATTTCTACAAAGCACGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521130.1
CDS GCA 72 bp GATCCTGTCACTGGAAGGAGAGATGCTCCAATTTCCTaGGACATCAAACCTCTCCAGTTCCTTTTCTTTAAC +
Preference number: 6 (lower is better)
Translates to: DPVTGRRDAPIS*DIKPLQFLFFN
Trigger: GTTAAAGAAAAGGAACTGGAGAGGTTTGATGTCGCAGGAAATTGGAGCATCTCTCCTTCCAGTGACAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp TCAGCTTACACCGGGCTTTTCTTCCGCGCTCCGGTTTaGTTTAAGGGTCTTAACAAGCAAATACTCTGGATT +
Preference number: 6 (lower is better)
Translates to: SAYTGLFFRAPV*FKGLNKQILWI
Trigger: AATCCAGAGTATTTGCTTGTTAAGACCCTTAAACAAAACCGGAGCGCGGAAGAAAAGCCCGGTGTAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 90 bp ACAAACTCGTCAGCTTACACCGGGCTTTTCTTCCGCGCTCCGGTTTaGTTTAAGGGTCTTAACAAGCAAATACTCTGGATTATCCTAATC +
Preference number: 6 (lower is better)
Translates to: TNSSAYTGLFFRAPV*FKGLNKQILWIILI
Trigger: GATTAGGATAATCCAGAGTATTTGCTTGTTAAGACCCTTAAACAAAACCGGAGCGCGGAAGAAAAGCCCGGTGTAAGCTGACGAGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 90 bp ACACGAGGCTGTGAACACGTGAACCATCACTTTGTAGGTGGAAAATaGAGCCCAGTCAAATTAGGGCCTTACGTTTCATTACCAAGCAAT +
Preference number: 6 (lower is better)
Translates to: TRGCEHVNHHFVGGK*SPVKLGPYVSLPSN
Trigger: ATTGCTTGGTAATGAAACGTAAGGCCCTAATTTGACTGGGCTCAATTTTCCACCTACAAAGTGATGGTTCACGTGTTCACAGCCTCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 90 bp TTTCAGAAAGCACAGTTGATCTTGATATTTGGTCAGAGTGCTCAGTaGCAGGGTGATGGTGCAAGTCTCAAAGGCAACAGGGACCAAATT +
Preference number: 6 (lower is better)
Translates to: FQKAQLILIFGQSAQ*QGDGASLKGNRDQI
Trigger: AATTTGGTCCCTGTTGCCTTTGAGACTTGCACCATCACCCTGCAACTGAGCACTCTGACCAAATATCAAGATCAACTGTGCTTTCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521130.1
CDS TCA 72 bp CTTACTTCTCCTGTCTACCTGAAATTTTGCACCCTTTaGCGAACATCTGTGTCATCTTCATCTCTACCCCAC +
Preference number: 6 (lower is better)
Translates to: LTSPVYLKFCTL*RTSVSSSSLPH
Trigger: GTGGGGTAGAGATGAAGATGACACAGATGTTCGTCAAAGGGTGCAAAATTTCAGGTAGACAGGAGAAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp TCTGTAGCCTCGCCTGAGCTATATGTATTTCTCTACTaGCCCTTTGGGGAGCACACTTTGGAAACGAAAAAT +
Preference number: 6 (lower is better)
Translates to: SVASPELYVFLY*PFGEHTLETKN
Trigger: ATTTTTCGTTTCCAAAGTGTGCTCCCCAAAGGGCAAGTAGAGAAATACATATAGCTCAGGCGAGGCTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518140.5
CDS CAA 72 bp ACTTACTTCTCCTGTCTACCTGAAATTTTGCACCCTTaGACGAACATCTGTGTCATCTTCATCTCTACCCCA +
Preference number: 6 (lower is better)
Translates to: TYFSCLPEILHP*TNICVIFISTP
Trigger: TGGGGTAGAGATGAAGATGACACAGATGTTCGTCAAAGGGTGCAAAATTTCAGGTAGACAGGAGAAGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp TGTGAACACGTGAACCATCACTTTGTAGGTGGAAAATaGAGCCCAGTCAAATTAGGGCCTTACGTTTCATTA +
Preference number: 6 (lower is better)
Translates to: CEHVNHHFVGGK*SPVKLGPYVSL
Trigger: TAATGAAACGTAAGGCCCTAATTTGACTGGGCTCAATTTTCCACCTACAAAGTGATGGTTCACGTGTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CCA 72 bp GAGAGTGGGAATTGGAGAAGTGATAGACAGTTTAGCTaGGAATTGACCTTGGTCACTTTGTCTTTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: ESGNWRSDRQFS*ELTLVTLSFSL
Trigger: TAAAGAAAAAGACAAAGTGACCAAGGTCAATTCCCAGCTAAACTGTCTATCACTTCTCCAATTCCCACTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 90 bp AGTTCTCTCAATGGATTGTTCACAGTCAGTTACAGATCAAACTCCTaGTTCTACTCTTTCCTCCTTTTTCACTACTGTACTCAACTAGTC +
Preference number: 6 (lower is better)
Translates to: SSLNGLFTVSYRSNS*FYSFLLFHYCTQLV
Trigger: GACTAGTTGAGTACAGTAGTGAAAAAGGAGGAAAGAGTAGAACAAGGAGTTTGATCTGTAACTGACTGTGAACAATCCATTGAGAGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519486.5
CDS CAA 72 bp AGACTTAATTTGATCTTTCAGAAAGCACAGTTGATCTaGATATTTGGTCAGAGTGCTCAGTTGCAGGGTGAT +
Preference number: 6 (lower is better)
Translates to: RLNLIFQKAQLI*IFGQSAQLQGD
Trigger: ATCACCCTGCAACTGAGCACTCTGACCAAATATCAAGATCAACTGTGCTTTCTGAAAGATCAAATTAAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521130.1
CDS GCA 72 bp TTAAAGAGCCTTCAGTTCAACTACCTCATGATAAAGTaGACCACATTTACATCACTCTTCTTGGTTTTCAAA +
Preference number: 6 (lower is better)
Translates to: LKSLQFNYLMIK*TTFTSLFLVFK
Trigger: TTTGAAAACCAAGAAGAGTGATGTAAATGTGGTGCACTTTATCATGAGGTAGTTGAACTGAAGGCTCTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519486.5