Pregenerated sensors for SLFN12L (Homo sapiens)
Ensembl gene IDs: ENSG00000205045, ENSG00000286065Ensembl transcript IDs: ENST00000260908.12, ENST00000651507.1, ENST00000675965.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTACTGCCTCAATTTCAGAACTTGTTATTGACCTGTTCAGGGATTTaGCTTCTCCCTGGCTCAGTCTTGGGAGGTTGCATGTGTTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LLPQFQNLLLTCSGI*LLPGSVLGGCMCSG Trigger: TCCTGAACACATGCAACCTCCCAAGACTGAGCCAGGGAGAAGTCAAATCCCTGAACAGGTCAATAACAAGTTCTGAAATTGAGGCAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR TCA 90 bp | TTGACTTCTCCCTGGCTCAGTCTTGGGAGGTTGCATGTGTTCAGGAATTTATCCGCCTGGCCAAGACGGTaGAACCCCATCTCTGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LTSPWLSLGRLHVFRNLSAWPRR*NPISAK Trigger: TTTAGCAGAGATGGGGTTTCACCGTCTTGGCCAGGC...GGATAAATTCCTGAACACATGCAACCTCCCAAGACTGAGCCAGGGAGAAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR GCA 90 bp | GGATTTGACTTCTCCCTGGCTCAGTCTTGGGAGGTTGCATGTGTTCAGGAATTTCCAGGAGGCAGAGGTTaGAGTGAGTCGAGATCGTGT | + |
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Preference number: 2 (lower is better) Translates to: GFDFSLAQSWEVACVQEFPGGRG*SESRSC Trigger: ACACGATCTCGACTCACTGCAACCTCTGCCTCCTGG...AAATTCCTGAACACATGCAACCTCCCAAGACTGAGCCAGGGAGAAGTCAAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR CCA 90 bp | ATGTCAAAGGCTAATTGGTCTATAAAAGAATTGATTCTCCAGCCGGGCGCGGTGATTAGCCAGGTGTGGTaGCAGGCACATGTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: MSKANWSIKELILQPGAVISQVW*QAHVIP Trigger: TGGGATTACATGTGCCTGCCACCACACCTGGCTAAT...CACCGCGCCCGGCTGGAGAATCAATTCTTTTATAGACCAATTAGCCTTTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR GCA 90 bp | GGAATAGTTTCAGTAGAAATGGTACCAGCTCCTCTTTGTACCTCTGGTAGAATTGCTGAGGCAGGGAATTaGTTGAACCCAGGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GIVSVEMVPAPLCTSGRIAEAGN*LNPGGR Trigger: TCTGCCTCCTGGGTTCAAGCAATTCCCTGCCTCAGC...AATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTTCTACTGAAACTATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR TCA 90 bp | GGAATATCTATAAAGAACTTAGGAAGAAGCGAACATAGGCTAATCCCAGTTTTCAGGCAGGGAATTGCTTaGACCCAGGAGGCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GISIKNLGRSEHRLIPVFRQGIA*TQEAEV Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTCCCTGCCT...GAAAACTGGGATTAGCCTATGTTCGCTTCTTCCTAAGTTCTTTATAGATATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR GCA 90 bp | TCAGAACTTGTTATTGACCTGTTCAGGGATTTGACTTCTCCCTGGCTCAGTCTTGTAACCTCCACTTCCTaGGTTCAAGCAATTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: SELVIDLFRDLTSPWLSLVTSTS*VQAILM Trigger: CATGAGAATTGCTTGAACGCAGGAAGTGGAGGTTAC...AAGACTGAGCCAGGGAGAAGTCAAATCCCTGAACAGGTCAATAACAAGTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR CCA 90 bp | TCAGAACTTGTTATTGACCTGTTCAGGGATTTGACTTCTCCCTGGCTCAGTCTTAAAATTAGCCAGGTGTaGTGGCAGGCACATGTAATC | + |
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Preference number: 2 (lower is better) Translates to: SELVIDLFRDLTSPWLSLKISQV*WQAHVI Trigger: GATTACATGTGCCTGCCACCACACCTGGCTAATTTT...AAGACTGAGCCAGGGAGAAGTCAAATCCCTGAACAGGTCAATAACAAGTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCTTTTATTGTTTGGAATAGTTTCAGTAGAAATGGTACCAGCTCCTCTTTCCCTGGCTCAGTCTTaGGAGGTTGCATGTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: FPLLLFGIVSVEMVPAPLSLAQS*EVACVQ Trigger: CTGAACACATGCAACCTCCCAAGACTGAGCCAGGGA...AAGAGGAGCTGGTACCATTTCTACTGAAACTATTCCAAACAATAAAAGAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR CCA 90 bp | GGAATAGTTTCAGTAGAAATGGTACCAGCTCCTCTTTGTACCTCTGGTAGAATTTCTATACTGATTATCTaGGAGATGCTGGAAATGTCA | + |
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Preference number: 2 (lower is better) Translates to: GIVSVEMVPAPLCTSGRISILII*EMLEMS Trigger: TGACATTTCCAGCATCTCCCAGATAATCAGTATAGA...AATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTTCTACTGAAACTATTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCTTTTATTGTTTGGAATAGTTTCAGTAGAAATGGTACCAGCTCCTCTTAGTCAAATGACATCTTaGTATGGCAAAACATGTGTA | + |
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Preference number: 2 (lower is better) Translates to: FPLLLFGIVSVEMVPAPLSQMTS*YGKTCV Trigger: TACACATGTTTTGCCATACCAAGATGTCATTTGACT...AAGAGGAGCTGGTACCATTTCTACTGAAACTATTCCAAACAATAAAAGAGGAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR CCA 72 bp | CTTGTTATTGACCTGTTCAGGGATTTGACTTCTCCCTaGCTCAGTCTTGGGAGGTTGCATGTGTTCAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: LVIDLFRDLTSP*LSLGRLHVFRN Trigger: ATTCCTGAACACATGCAACCTCCCAAGACTGAGCCAGGGAGAAGTCAAATCCCTGAACAGGTCAATAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR TCA 72 bp | CAATTTCAGAACTTGTTATTGACCTGTTCAGGGATTTaGCTTCTCCCTGGCTCAGTCTTGGGAGGTTGCATG | + |
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Preference number: 3 (lower is better) Translates to: QFQNLLLTCSGI*LLPGSVLGGCM Trigger: CATGCAACCTCCCAAGACTGAGCCAGGGAGAAGTCAAATCCCTGAACAGGTCAATAACAAGTTCTGAAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR CAA 90 bp | GGAATAGTTTCAGTAGAAATGGTACCAGCTCCTCTTTGTACCTCTGGTAGAATTTGGTCTATAAAAGAATaGATTCTCCAGCCGGGCGCG | + |
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Preference number: 3 (lower is better) Translates to: GIVSVEMVPAPLCTSGRIWSIKE*ILQPGA Trigger: CGCGCCCGGCTGGAGAATCAATTCTTTTATAGACCA...AATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTTCTACTGAAACTATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTCTTTTATTGTTTGGAATAGTTTCAGTAGAAATGGTACCAGCTCCTCTTGACCTGTTCAGGGATTaGACTTCTCCCTGGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: FPLLLFGIVSVEMVPAPLDLFRD*TSPWLS Trigger: ACTGAGCCAGGGAGAAGTCAAATCCCTGAACAGGTC...AAGAGGAGCTGGTACCATTTCTACTGAAACTATTCCAAACAATAAAAGAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR TCA 72 bp | GTTAGTAATTACTGCCTCAATTTCAGAACTTGTTATTaGCCTGTTCAGGGATTTGACTTCTCCCTGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: VSNYCLNFRTCY*PVQGFDFSLAQ Trigger: CTGAGCCAGGGAGAAGTCAAATCCCTGAACAGGTCAATAACAAGTTCTGAAATTGAGGCAGTAATTACTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR-3UTR CAA 90 bp | GGAATAGTTTCAGTAGAAATGGTACCAGCTCCTCTTTGTACCTCTGGTAGAATTCAACATCACGTCAAGTaGCCTAACTTGCAATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: GIVSVEMVPAPLCTSGRIQHHVK*PNLQCF Trigger: AAAACATTGCAAGTTAGGCAACTTGACGTGATGTTG...AATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTTCTACTGAAACTATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR CAA 72 bp | AGGGATTTGACTTCTCCCTGGCTCAGTCTTGGGAGGTaGCATGTGTTCAGGAATTTATCCATTTCTTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: RDLTSPWLSLGR*HVFRNLSISSR Trigger: TCTAGAAGAAATGGATAAATTCCTGAACACATGCAACCTCCCAAGACTGAGCCAGGGAGAAGTCAAATCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| 3UTR CAA 72 bp | TCAATTTCAGAACTTGTTATTGACCTGTTCAGGGATTaGACTTCTCCCTGGCTCAGTCTTGGGAGGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: SISELVIDLFRD*TSPWLSLGRLH Trigger: ATGCAACCTCCCAAGACTGAGCCAGGGAGAAGTCAAATCCCTGAACAGGTCAATAACAAGTTCTGAAATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260908.12 |
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| CDS TCA 90 bp | CCTGGTAGCACTTGGGAGTTAAAAGATTCCACAGGGTTGAGATGCTaGAAAGATGAGAAAGTTCCAGGAGCTCTGATCTACTTAGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: PGSTWELKDSTGLRC*KDEKVPGALIYLGV Trigger: GACTCCTAAGTAGATCAGAGCTCCTGGAACTTTCTCATCTTTTCAGCATCTCAACCCTGTGGAATCTTTTAACTCCCAAGTGCTACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651507.1 |
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| CDS GCA 90 bp | GCTTTCAAATCTGAGCGCTCTGCAGAACAAGTCCAGGAAAAATGCTaGTTTGGTATTTCTGAGAATGAAACTAGAAGGTTGCCGCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: AFKSERSAEQVQEKC*FGISENETRRLPPF Trigger: AAAAGGCGGCAACCTTCTAGTTTCATTCTCAGAAATACCAAAGCAGCATTTTTCCTGGACTTGTTCTGCAGAGCGCTCAGATTTGAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651507.1 |
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| CDS CAA 90 bp | TATATTCACGAAGAGGATAACTCTGGGAGACAGGTGATGATGTACTaGCTGGAGAGGGCAGTTCCTCACATACTGGTTCTGAATCCACCA | + |
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Preference number: 6 (lower is better) Translates to: YIHEEDNSGRQVMMY*LERAVPHILVLNPP Trigger: TGGTGGATTCAGAACCAGTATGTGAGGAACTGCCCTCTCCAGCAAGTACATCATCACCTGTCTCCCAGAGTTATCCTCTTCGTGAATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651507.1 ENST00000675965.1 |
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| CDS TCA 72 bp | ACTTGGGAGTTAAAAGATTCCACAGGGTTGAGATGCTaGAAAGATGAGAAAGTTCCAGGAGCTCTGATCTAC | + |
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Preference number: 6 (lower is better) Translates to: TWELKDSTGLRC*KDEKVPGALIY Trigger: GTAGATCAGAGCTCCTGGAACTTTCTCATCTTTTCAGCATCTCAACCCTGTGGAATCTTTTAACTCCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651507.1 |
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