Pregenerated sensors for SLFN12 (Homo sapiens)
Ensembl gene IDs: ENSG00000172123Ensembl transcript IDs: ENST00000304905.10, ENST00000394562.5, ENST00000428476.2, ENST00000445092.5, ENST00000447040.6, ENST00000452764.3
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAGATAGCCCTGGACAGTaGTGTCTCTGCCGTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGDSPGQ*CLCRCH Trigger: ATGGCAACGGCAGAGACATCACTGTCCAGGGCTATC...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAAGAAGCGCTCCACTCTaGGTGCACAGACATATCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGRSAPL*VHRHIH Trigger: GTGGATATGTCTGTGCACTCAGAGTGGAGCGCTTCT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAAGCCCGAGATCAGTCTaGATGGTTGCAGAAAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGSPRSV*MVAESD Trigger: ATCGCTTTCTGCAACCATTCAGACTGATCTCGGGCT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAGGATCCATTCCTTCCTaGTCAACTGCATCACACGGT | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGGSIPS*STASHG Trigger: ACCGTGTGATGCAGTTGACCAGGAAGGAATGGATCC...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAAAAAGAGGCCAACTGTaGGGAGCAGGTAATGACGTA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGKRGQL*GAGNDV Trigger: TACGTCATTACCTGCTCCCCACAGTTGGCCTCTTTT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAAGGTTCTTGGCGTGTTaGACAAAGAACTGGACAAAC | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGRFLAC*TKNWTN Trigger: GTTTGTCCAGTTCTTTGTTCAACACGCCAAGAACCT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTCTCCATACAGAAGTaGTGCACAGGCATCTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFSIQK*CTGIFL Trigger: TAGGAAGATGCCTGTGCATCACTTCTGTATGGAGAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR GCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATCCTTCCTGGTCAACTaGATCACACGGTTATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGSFLVN*ITRLSF Trigger: GAAAGATAACCGTGTGATGCAGTTGACCAGGAAGGA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATGCACACAATGTAAATaGAATAGGAGCCCGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGCTQCK*NRSPRS Trigger: TGATCTCGGGCTCCTATTTCATTTACATTGTGTGCA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR GCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTCTCCTGGTTGGCTTaGCAAAATATGTTACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFSWLA*QNMLPV Trigger: CACTGGTAACATATTTTGGCAAGCCAACCAGGAGAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR GCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTTTCCCAGCAGCTATaGAGTGTCCAAGCAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFSQQL*SVQAEI Trigger: AATTTCTGCTTGGACACTGCATAGCTGCTGGGAAAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGACTAAAGTTTTCCCACTaGTTACTTGGTGTGCACACA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGLKFSH*LLGVHT Trigger: TGTGTGCACACCAAGTAACCAGTGGGAAAACTTTAG...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAAGTTACCATTCTGCATaGAGTCTAAGTACTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGSYHSA*SLSTQE Trigger: TTCCTGAGTACTTAGACTTCATGCAGAATGGTAACT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAGGTGTTCAAGCTCCATaGCTTCACAAAAATCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGGVQAP*LHKNQK Trigger: TTTCTGATTTTTGTGAAGTCATGGAGCTTGAACACC...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGACAGCAGTGGCATTCATaGCTTTTGCAGATGTTATAT | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGQQWHS*LLQMLY Trigger: ATATAACATCTGCAAAAGTCATGAATGCCACTGCTG...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGACCACTGTGGAAATTCTaGGTTTCATCAAGGATAATC | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGPLWKF*VSSRII Trigger: GATTATCCTTGATGAAACTCAGAATTTCCACAGTGG...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTCCCACTGGTTACTTaGTGTGCACACAATGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFPLVT*CAHNVN Trigger: ATTTACATTGTGTGCACACCAAGTAACCAGTGGGAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATCTGCAAAGGTTTTCTaGAGTATACGTTATCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGSAKVF*SIRYPS Trigger: GGAAGGATAACGTATACTCCAGAAAACCTTTGCAGA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAAAAGCAGAGATTTATTaGAAACGAAAGTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGKAEIY*KRKCTP Trigger: TGGAGTGCACTTTCGTTTTCAATAAATCTCTGCTTT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR TCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAAAAGCAAGGAAAGAATaGAGCAACAAAAGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGKARKE*SNKSRD Trigger: ATCTCTGCTTTTGTTGCTTCATTCTTTCCTTGCTTT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTCTTTTCTCCTGGTTaGCTTGCCAAAATATGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFFSPG*LAKICY Trigger: GTAACATATTTTGGCAAGCCAACCAGGAGAAAAGAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAGAAATTCTTTTCTCCTaGTTGGCTTGCCAAAATATG | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGEILFS*LACQNM Trigger: CATATTTTGGCAAGCCAACCAGGAGAAAAGAATTTC...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTTCTAGGTATATGCTaGGAGATTTTCACTGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFLGIC*EIFTVV Trigger: GACAACAGTGAAAATCTCCCAGCATATACCTAGAAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR GCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATGTTTTCTAGGTATATaGTGGGAGATTTTCACTGTT | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGCFLGI*WEIFTV Trigger: AACAGTGAAAATCTCCCAGCATATACCTAGAAAACA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CCA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTCCCAGTTCAAGCATaGAAGAAAATTTATTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFPVQA*KKIYSG Trigger: TCCTGAATAAATTTTCTTCCATGCTTGAACTGGGAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS CCA 90 bp | TCCGGCCCTCCCCATCCTGGGCTGCGGCTCCACACTTCCCCAGCGTaGCCTGCATTTCTATTGGGCAGCTGGCGCTCCGGAAGTGTCCGC | + |
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Preference number: 5 (lower is better) Translates to: SGPPHPGLRLHTSPA*PAFLLGSWRSGSVR Trigger: GCGGACACTTCCGGAGCGCCAGCTGCCCAATAGAAATGCAGGCCACGCTGGGGAAGTGTGGAGCCGCAGCCCAGGATGGGGAGGGCCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452764.3 |
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| CDS GCA 90 bp | CCCTCCCCATCCTGGGCTGCGGCTCCACACTTCCCCAGCGTGGCCTaGATTTCTATTGGGCAGCTGGCGCTCCGGAAGTGTCCGCACTCT | + |
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Preference number: 5 (lower is better) Translates to: PSPSWAAAPHFPSVA*ISIGQLALRKCPHS Trigger: AGAGTGCGGACACTTCCGGAGCGCCAGCTGCCCAATAGAAATGCAGGCCACGCTGGGGAAGTGTGGAGCCGCAGCCCAGGATGGGGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452764.3 |
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| CDS CCA 90 bp | GCAGGGCAACTATCCCCATTCACTCCTTGGCCTTCAAGGCAGCACTaGAGAGTAGCCCCCGGCCAGAAACCTGCAGTCGCCTCCGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: AGQLSPFTPWPSRQH*RVAPGQKPAVASVS Trigger: AGACACGGAGGCGACTGCAGGTTTCTGGCCGGGGGCTACTCTCCAGTGCTGCCTTGAAGGCCAAGGAGTGAATGGGGATAGTTGCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428476.2 |
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| CDS CCA 90 bp | AGCCCTTCCCGCTTCTGGGCAGGGCAACTATCCCCATTCACTCCTTaGCCTTCAAGGCAGCACTGGAGAGTAGCCCCCGGCCAGAAACCT | + |
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Preference number: 5 (lower is better) Translates to: SPSRFWAGQLSPFTP*PSRQHWRVAPGQKP Trigger: AGGTTTCTGGCCGGGGGCTACTCTCCAGTGCTGCCTTGAAGGCCAAGGAGTGAATGGGGATAGTTGCCCTGCCCAGAAGCGGGAAGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428476.2 |
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| CDS CCA 90 bp | CTTGGCGTGTTGAACAAAGAACAGCTCGCGGTGCTCCCTAGAAGCTaGATTCTTCGCAGGTGCGAGCACACCCCAGATGCCAGCGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LGVLNKEQLAVLPRS*ILRRCEHTPDASVD Trigger: GTCCACGCTGGCATCTGGGGTGTGCTCGCACCTGCGAAGAATCCAGCTTCTAGGGAGCACCGCGAGCTGTTCTTTGTTCAACACGCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394562.5 ENST00000428476.2 ENST00000445092.5 ENST00000447040.6 |
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| CDS CCA 90 bp | TGTCCAAGCAGAAATTCTTTTCAGCTCGCGGTGCTCCCTAGAAGCTaGATTCTTCGCAGGTGCGAGCACACCCCAGATGCCAGCGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: CPSRNSFQLAVLPRS*ILRRCEHTPDASVD Trigger: GTCCACGCTGGCATCTGGGGTGTGCTCGCACCTGCGAAGAATCCAGCTTCTAGGGAGCACCGCGAGCTGAAAAGAATTTCTGCTTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452764.3 |
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| CDS GCA 90 bp | CAGAAACCTGCAGTCGCCTCCGTGTCTAGGCGCTCCTGGTTGGCTTaGCAAAATATGTTACCAGTGAAGAGTGTCCAGGTTCTTGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: QKPAVASVSRRSWLA*QNMLPVKSVQVLGV Trigger: CACGCCAAGAACCTGGACACTCTTCACTGGTAACATATTTTGGCAAGCCAACCAGGAGCGCCTAGACACGGAGGCGACTGCAGGTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428476.2 |
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| CDS GCA 90 bp | TCTAGAGATGGCTGCATGCAAACATCGAAAACCTCCTGGTTGGCTTaGCAAAATATGTTACCAGTGAAGAGTGTCCAGGTTCTTGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: SRDGCMQTSKTSWLA*QNMLPVKSVQVLGV Trigger: CACGCCAAGAACCTGGACACTCTTCACTGGTAACATATTTTGGCAAGCCAACCAGGAGGTTTTCGATGTTTGCATGCAGCCATCTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445092.5 |
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| CDS TCA 90 bp | CAAACAAAGCAAGGAAAGAATGAAGCAACAAAAGCAGAGATTTATTaGAAACGAAAGTGCACTCCACAGGGTGGGAGCAGGCCCGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: QTKQGKNEATKAEIY*KRKCTPQGGSRPED Trigger: ATCCTCGGGCCTGCTCCCACCCTGTGGAGTGCACTTTCGTTTTCAATAAATCTCTGCTTTTGTTGCTTCATTCTTTCCTTGCTTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS CCA 90 bp | GTTGGCTTGCCAAAATATGTTACCAGTGAAGAGTGTCCAGGTTCTTaGCGTGTTGAACAAAGAACTGGACAAACACACAAACAAAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: VGLPKYVTSEECPGS*RVEQRTGQTHKQSK Trigger: CTTGCTTTGTTTGTGTGTTTGTCCAGTTCTTTGTTCAACACGCCAAGAACCTGGACACTCTTCACTGGTAACATATTTTGGCAAGCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CAA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAGTGATGTCTCTGCCGTaGCCATTCCAAAAGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGVMSLP*PFQKRP Trigger: TGGCCTCTTTTGGAATGGCAACGGCAGAGACATCAC...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CAA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGACAGGTTCTTGGCGTGTaGAACAAAGAACTGGACAAA | + |
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Preference number: 5 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGQVLGV*NKELDK Trigger: TTTGTCCAGTTCTTTGTTCAACACGCCAAGAACCTG...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CAA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTTCCCACTGGTTACTaGGTGTGCACACAATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFPTGY*VCTQCK Trigger: TTTACATTGTGTGCACACCAAGTAACCAGTGGGAAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CAA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATTTCTCCTGGTTGGCTaGCCAAAATATGTTACCAGT | + |
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Preference number: 5 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGFLLVG*PKYVTS Trigger: ACTGGTAACATATTTTGGCAAGCCAACCAGGAGAAA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS TCA 90 bp | TTGAACAAAGAACTGGACAAACACACAAACAAAGCAAGGAAAGAATaGAGCAACAAAAGCAGAGATTTATTGAAAACGAAAGTGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: LNKELDKHTNKARKE*SNKSRDLLKTKVHS Trigger: GGAGTGCACTTTCGTTTTCAATAAATCTCTGCTTTTGTTGCTTCATTCTTTCCTTGCTTTGTTTGTGTGTTTGTCCAGTTCTTTGTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CAA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGATCTCTTTTGTACAAATaGGAGCTCAAGGTGGTAATC | + |
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Preference number: 5 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGSLLYK*ELKVVI Trigger: GATTACCACCTTGAGCTCCAATTTGTACAAAAGAGA...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CAA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAAAAAGCAGAGATTTATaGAAAACGAAAGTGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGKSRDL*KTKVHS Trigger: GGAGTGCACTTTCGTTTTCAATAAATCTCTGCTTTT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS-3UTR CAA 90 bp | TCACTGTTGTCATTAAGAATAAAAGTGTTGCAATTTTCCCAGTTCAAGCATGGAATTCTTTTCTCCTGGTaGGCTTGCCAAAATATGTTA | + |
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Preference number: 5 (lower is better) Translates to: SLLSLRIKVLQFSQFKHGILFSW*ACQNML Trigger: TAACATATTTTGGCAAGCCAACCAGGAGAAAAGAAT...TCCATGCTTGAACTGGGAAAATTGCAACACTTTTATTCTTAATGACAACAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS CCA 72 bp | CCCCATCCTGGGCTGCGGCTCCACACTTCCCCAGCGTaGCCTGCATTTCTATTGGGCAGCTGGCGCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PHPGLRLHTSPA*PAFLLGSWRSG Trigger: TCCGGAGCGCCAGCTGCCCAATAGAAATGCAGGCCACGCTGGGGAAGTGTGGAGCCGCAGCCCAGGATGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452764.3 |
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| CDS GCA 72 bp | TCCTGGGCTGCGGCTCCACACTTCCCCAGCGTGGCCTaGATTTCTATTGGGCAGCTGGCGCTCCGGAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SWAAAPHFPSVA*ISIGQLALRKC Trigger: ACACTTCCGGAGCGCCAGCTGCCCAATAGAAATGCAGGCCACGCTGGGGAAGTGTGGAGCCGCAGCCCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452764.3 |
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| CDS CAA 90 bp | GAGCCCTTCCCGCTTCTGGGCAGGGCAACTATCCCCATTCACTCCTaGGCCTTCAAGGCAGCACTGGAGAGTAGCCCCCGGCCAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: EPFPLLGRATIPIHS*AFKAALESSPRPET Trigger: GGTTTCTGGCCGGGGGCTACTCTCCAGTGCTGCCTTGAAGGCCAAGGAGTGAATGGGGATAGTTGCCCTGCCCAGAAGCGGGAAGGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428476.2 |
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| CDS CCA 72 bp | CGCTTCTGGGCAGGGCAACTATCCCCATTCACTCCTTaGCCTTCAAGGCAGCACTGGAGAGTAGCCCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: RFWAGQLSPFTP*PSRQHWRVAPG Trigger: GCCGGGGGCTACTCTCCAGTGCTGCCTTGAAGGCCAAGGAGTGAATGGGGATAGTTGCCCTGCCCAGAAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428476.2 |
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| CDS CAA 72 bp | CGGCTCCACACTTCCCCAGCGTGGCCTGCATTTCTATaGGGCAGCTGGCGCTCCGGAAGTGTCCGCACTCTT | + |
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Preference number: 6 (lower is better) Translates to: RLHTSPAWPAFL*GSWRSGSVRTL Trigger: AAGAGTGCGGACACTTCCGGAGCGCCAGCTGCCCAATAGAAATGCAGGCCACGCTGGGGAAGTGTGGAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452764.3 |
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| CDS CCA 72 bp | CTATCCCCATTCACTCCTTGGCCTTCAAGGCAGCACTaGAGAGTAGCCCCCGGCCAGAAACCTGCAGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LSPFTPWPSRQH*RVAPGQKPAVA Trigger: GGCGACTGCAGGTTTCTGGCCGGGGGCTACTCTCCAGTGCTGCCTTGAAGGCCAAGGAGTGAATGGGGATAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428476.2 |
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| CDS CCA 72 bp | GGCTCCACACTTCCCCAGCGTGGCCTGCATTTCTATTaGGCAGCTGGCGCTCCGGAAGTGTCCGCACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GSTLPQRGLHFY*AAGAPEVSALF Trigger: AAAGAGTGCGGACACTTCCGGAGCGCCAGCTGCCCAATAGAAATGCAGGCCACGCTGGGGAAGTGTGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452764.3 |
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| CDS CCA 72 bp | TTGAACAAAGAACAGCTCGCGGTGCTCCCTAGAAGCTaGATTCTTCGCAGGTGCGAGCACACCCCAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: LNKEQLAVLPRS*ILRRCEHTPDA Trigger: GGCATCTGGGGTGTGCTCGCACCTGCGAAGAATCCAGCTTCTAGGGAGCACCGCGAGCTGTTCTTTGTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394562.5 ENST00000428476.2 ENST00000445092.5 ENST00000447040.6 |
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| CDS CCA 72 bp | AGAAATTCTTTTCAGCTCGCGGTGCTCCCTAGAAGCTaGATTCTTCGCAGGTGCGAGCACACCCCAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: RNSFQLAVLPRS*ILRRCEHTPDA Trigger: GGCATCTGGGGTGTGCTCGCACCTGCGAAGAATCCAGCTTCTAGGGAGCACCGCGAGCTGAAAAGAATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452764.3 |
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| CDS GCA 72 bp | AAGCTGGATTCTTCGCAGGTGCGAGCACACCCCAGATaGCAGCGTGGACCCTTGAGCAACTGGAAGTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: KLDSSQVRAHPR*QRGPLSNWKLK Trigger: TTTTAACTTCCAGTTGCTCAAGGGTCCACGCTGGCATCTGGGGTGTGCTCGCACCTGCGAAGAATCCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000394562.5 ENST00000428476.2 ENST00000445092.5 ENST00000447040.6 ENST00000452764.3 |
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| CDS GCA 72 bp | GCAGTCGCCTCCGTGTCTAGGCGCTCCTGGTTGGCTTaGCAAAATATGTTACCAGTGAAGAGTGTCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: AVASVSRRSWLA*QNMLPVKSVQV Trigger: AACCTGGACACTCTTCACTGGTAACATATTTTGGCAAGCCAACCAGGAGCGCCTAGACACGGAGGCGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428476.2 |
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| CDS CAA 72 bp | ATGTTACCAGTGAAGAGTGTCCAGGTTCTTGGCGTGTaGAACAAAGAACAGCTCGCGGTGCTCCCTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: MLPVKSVQVLGV*NKEQLAVLPRS Trigger: GCTTCTAGGGAGCACCGCGAGCTGTTCTTTGTTCAACACGCCAAGAACCTGGACACTCTTCACTGGTAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394562.5 ENST00000428476.2 ENST00000445092.5 ENST00000447040.6 |
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| CDS GCA 72 bp | GGCTGCATGCAAACATCGAAAACCTCCTGGTTGGCTTaGCAAAATATGTTACCAGTGAAGAGTGTCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GCMQTSKTSWLA*QNMLPVKSVQV Trigger: AACCTGGACACTCTTCACTGGTAACATATTTTGGCAAGCCAACCAGGAGGTTTTCGATGTTTGCATGCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445092.5 |
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| CDS TCA 72 bp | CAAGGAAAGAATGAAGCAACAAAAGCAGAGATTTATTaGAAACGAAAGTGCACTCCACAGGGTGGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QGKNEATKAEIY*KRKCTPQGGSR Trigger: CCTGCTCCCACCCTGTGGAGTGCACTTTCGTTTTCAATAAATCTCTGCTTTTGTTGCTTCATTCTTTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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| CDS CCA 72 bp | TCTAGAGATGGCTGCATGCAAACATCGAAAACCTCCTaGTTGGCTTGCCAAAATATGTTACCAGTGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SRDGCMQTSKTS*LACQNMLPVKS Trigger: ACTCTTCACTGGTAACATATTTTGGCAAGCCAACCAGGAGGTTTTCGATGTTTGCATGCAGCCATCTCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445092.5 |
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| CDS GCA 72 bp | AGTGTCCAAGCAGAAATTCTTTTCTCCTGGTTGGCTTaGCAAAATATGTTACCAGTGAAGAGTGTCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SVQAEILFSWLA*QNMLPVKSVQV Trigger: AACCTGGACACTCTTCACTGGTAACATATTTTGGCAAGCCAACCAGGAGAAAAGAATTTCTGCTTGGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304905.10 ENST00000447040.6 |
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| CDS CAA 72 bp | CCATCCATAGGTTACAGTGTCCTCATGGTCGCATATTaGTTTCACTTCTCATCATTCCAGTTGAAGAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: PSIGYSVLMVAY*FHFSSFQLKRD Trigger: GTCTCTCTTCAACTGGAATGATGAGAAGTGAAACAAATATGCGACCATGAGGACACTGTAACCTATGGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394562.5 ENST00000445092.5 |
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| CDS CCA 72 bp | CCAAAATATGTTACCAGTGAAGAGTGTCCAGGTTCTTaGCGTGTTGAACAAAGAACTGGACAAACACACAAA | + |
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Preference number: 6 (lower is better) Translates to: PKYVTSEECPGS*RVEQRTGQTHK Trigger: TTTGTGTGTTTGTCCAGTTCTTTGTTCAACACGCCAAGAACCTGGACACTCTTCACTGGTAACATATTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304905.10 |
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