RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000119906

Ensembl transcript IDs: ENST00000238961.9, ENST00000370269.3, ENST00000370271.7, ENST00000481654.1, ENST00000609386.1, ENST00000649226.1

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTaGCTCCTTAGCGACAAACCACCACAGTCATCCCCTAATTCTCCA +
Preference number: 1 (lower is better)
Translates to: IMLTALRAPPPGPYC*LLSDKPPQSSPNSP
Trigger: TGGAGAATTAGGGGATGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 90 bp CTTTCTTTCTACCTAAGGCGGGTTCTCCGTAGCTGTCCAGGCTGGTaGTCACTAGACCAAGAGCAGCTGCCCAACTACAGAGAAGCAAAC +
Preference number: 1 (lower is better)
Translates to: LSFYLRRVLRSCPGW*SLDQEQLPNYREAN
Trigger: GTTTGCTTCTCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGGACAGCTACGGAGAACCCGCCTTAGGTAGAAAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR CCA 90 bp TCACTTTCTTTCTACCTAAGGCGGGTTCTCCGTAGCTGTCCAGGCTaGTGGTCACTAGACCAAGAGCAGCTGCCCAACTACAGAGAAGCA +
Preference number: 1 (lower is better)
Translates to: SLSFYLRRVLRSCPG*WSLDQEQLPNYREA
Trigger: TGCTTCTCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGGACAGCTACGGAGAACCCGCCTTAGGTAGAAAGAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR TCA 90 bp GTCCAATTAGGGACCAGCTGTACCAACCACAGGAGGTTGTGGGGATaGCTGGAGAGTTCATTTATGCCCAGACAGAGTTCAGGCACCTTT +
Preference number: 1 (lower is better)
Translates to: VQLGTSCTNHRRLWG*LESSFMPRQSSGTF
Trigger: AAAGGTGCCTGAACTCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGGTACAGCTGGTCCCTAATTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR CCA 90 bp ACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTaGCCTGACATTCTCTGTGCAATGAACATTTCTCCCTCTCTACCA +
Preference number: 1 (lower is better)
Translates to: THHHSVQASFAKSPK*PDILCAMNISPSLP
Trigger: TGGTAGAGAGGGAGAAATGTTCATTGCACAGAGAATGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 90 bp TTCTCTTGGTTCATATTTTTGCTGCTGCAACTCCTATTAAGAATCTaGTACCCAGAAGTCATGAAGCTGCCCCTGAGTAGGCCGACAGTT +
Preference number: 1 (lower is better)
Translates to: FSWFIFLLLQLLLRI*YPEVMKLPLSRPTV
Trigger: AACTGTCGGCCTACTCAGGGGCAGCTTCATGACTTCTGGGTACCAGATTCTTAATAGGAGTTGCAGCAGCAAAAATATGAACCAAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR GCA 90 bp TGGCTAGTAAGAGTTTGTTACTACCCCTGGGCTAAAAACAACGTGTaGACTTCCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCT +
Preference number: 1 (lower is better)
Translates to: WLVRVCYYPWAKNNV*TSTNPLPFKPKDGS
Trigger: AGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGGAAGTGCACACGTTGTTTTTAGCCCAGGGGTAGTAACAAACTCTTACTAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR GCA 90 bp ACGTCACATTCCAAATCTGCAAGTTCTTTTAAGTATGAACTAGCGTaGACGCTGGACTACAAAGTAATTCGTGGAAGGGATTCCCTCATC +
Preference number: 1 (lower is better)
Translates to: TSHSKSASSFKYELA*TLDYKVIRGRDSLI
Trigger: GATGAGGGAATCCCTTCCACGAATTACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTTAAAAGAACTTGCAGATTTGGAATGTGACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR CCA 90 bp AGAGAGTCACAAAGTTTTCATGAGAACCCAAATGCAAATACTGACTaGACTATGACCTGGAGTCTGAAGACCTCTACCAGAGTCATAAAT +
Preference number: 1 (lower is better)
Translates to: RESQSFHENPNANTD*TMTWSLKTSTRVIN
Trigger: ATTTATGACTCTGGTAGAGGTCTTCAGACTCCAGGTCATAGTCCAGTCAGTATTTGCATTTGGGTTCTCATGAAAACTTTGTGACTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR GCA 90 bp CACACACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTaGCAAAATTATATACTCATGGAAACAAGGTTGTTGGAAACTTGT +
Preference number: 1 (lower is better)
Translates to: HTHIHRHSVPKNSGV*QNYILMETRLLETC
Trigger: ACAAGTTTCCAACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR GCA 90 bp AGGATTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATaGCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTAT +
Preference number: 1 (lower is better)
Translates to: RIKLQNESPHRWADR*QSFKLLSNRTLCIY
Trigger: ATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 90 bp ACTTTTGTTGGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTaGAAACTGGATTTACTTAGTCTTCCCTATAAAATCTCTGACTGC +
Preference number: 1 (lower is better)
Translates to: TFVGLTLGASISLGS*KLDLLSLPYKISDC
Trigger: GCAGTCAGAGATTTTATAGGGAAGACTAAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACCAACAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 90 bp ATGTATCTACAAAGGATTAAATTACAGAACGAAAGCCCCCATCGTTaGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACT +
Preference number: 1 (lower is better)
Translates to: MYLQRIKLQNESPHR*ADRCQSFKLLSNRT
Trigger: AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAATCCTTTGTAGATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 90 bp ACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATaGAAACAAGGTTGTTGGAAACTTGTCCAGATCTTTAGGCTTTTA +
Preference number: 1 (lower is better)
Translates to: TVSQRIQVSAKIIYS*KQGCWKLVQIFRLL
Trigger: TAAAAGCCTAAAGATCTGGACAAGTTTCCAACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR GCA 90 bp TCTTGGAAACTGGATTTACTTAGTCTTCCCTATAAAATCTCTGACTaGCAATGCTTGATTGACATGAGCTCAAAAGTTACTGATGCTATT +
Preference number: 1 (lower is better)
Translates to: SWKLDLLSLPYKISD*QCLIDMSSKVTDAI
Trigger: AATAGCATCAGTAACTTTTGAGCTCATGTCAATCAAGCATTGGCAGTCAGAGATTTTATAGGGAAGACTAAGTAAATCCAGTTTCCAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 90 bp ATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTTaGAAACTTGTCCAGATCTTTAGGCTTTTACAATATAGACTTCTG +
Preference number: 1 (lower is better)
Translates to: IQVSAKIIYSWKQGC*KLVQIFRLLQYRLL
Trigger: CAGAAGTCTATATTGTAAAAGCCTAAAGATCTGGACAAGTTTCCAACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAGAAAGCCCCCATCGTTaGGCAGATAGATGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSESPHR*ADRCQS
Trigger: ACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTC...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAAGGAGGTTGTGGGGATaGCTGGAGAGTTCATTTATG +
Preference number: 2 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSRRLWG*LESSFM
Trigger: CATAAATGAACTCTCCAGTCATCCCCACAACCTCCT...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR TCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCCCTCTTAAGGGGATCTaGCAACATGCCAAACTTTTG +
Preference number: 2 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLPLKGI*QHAKLL
Trigger: CAAAAGTTTGGCATGTTGTCAGATCCCCTTAAGAGG...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGCACACCACCACTCAGTaGAAGCTTCGTTTGCCAAGT +
Preference number: 2 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGHTTTQ*KLRLPS
Trigger: ACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAATGAAGGAAAATGCATaGATTGAAACCTCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSMKENA*IETSLW
Trigger: CCACAGGGAGGTTTCAATCCATGCATTTTCCTTCAT...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTGCTACATCAGACAATaGTGGGATCCATGGCCAAAC +
Preference number: 2 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGCYIRQ*WDPWPN
Trigger: GTTTGGCCATGGATCCCATCATTGTCTGATGTAGCA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR GCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCGCTAAAAACAACGTGTaGACTTCCACTAACCCTCTA +
Preference number: 2 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLAKNNV*TSTNPL
Trigger: TAGAGGGTTAGTGGAAGTGCACACGTTGTTTTTAGC...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp AGCCTCTTGGAGAGGCGTGAAGTTACTGAAAGAGAAAACACGTCACATTCCAAATGCCAGGCCCCGAAATaGCAACGCCTGAGCTCGCGG +
Preference number: 2 (lower is better)
Translates to: SLLERREVTERENTSHSKCQAPK*QRLSSR
Trigger: CCGCGAGCTCAGGCGTTGGCATTTCGGGGCCTGGCA...TTTGGAATGTGACGTGTTTTCTCTTTCAGTAACTTCACGCCTCTCCAAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGCCTGTTGAGTAGCTaGGACCATAGGTATGTGGCA +
Preference number: 2 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSLLSS*DHRYVA
Trigger: TGCCACATACCTATGGTCCCAGCTACTCAACAGGCT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
3UTR-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTGGGCTCAAGAGATTTaGCTGCTTTGGCCTCCTAAA +
Preference number: 2 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPWAQEI*LLWPPK
Trigger: TTTAGGAGGCCAAAGCAGGCAAATCTCTTGAGCCCA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
3UTR-3UTR CCA 90 bp CCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTCAGTTTGTTACTACCCCTaGGCTAAAAACAACGTGTGC +
Preference number: 2 (lower is better)
Translates to: PSHSPGNSSRRETKHGDSVCYYP*AKNNVC
Trigger: GCACACGTTGTTTTTAGCCCAGGGGTAGTAACAAAC...TGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTAGTCTCAAACTCCTaGGCTCAAGAGATTTGCCTG +
Preference number: 2 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLVSNS*AQEICL
Trigger: CAGGCAAATCTCTTGAGCCCAGGAGTTTGAGACTAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
3UTR-3UTR GCA 90 bp CCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTCAACTGGAACTTGGTCTTaGTTTCCATGTCCAACTTCT +
Preference number: 2 (lower is better)
Translates to: PSHSPGNSSRRETKHGDSTGTWS*FPCPTS
Trigger: AGAAGTTGGACATGGAAAGCAAGACCAAGTTCCAGT...TGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGAGATTTGCCTGCTTTaGCCTCCTAAAGTACTGGAT +
Preference number: 2 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPEICLL*PPKVLD
Trigger: ATCCAGTACTTTAGGAGGCCAAAGCAGGCAAATCTC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
3UTR-3UTR CCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCTGCTGTACATTTTCTTaGCATTCATTGGATTCTGTA +
Preference number: 2 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLCCTFS*HSLDSV
Trigger: TACAGAATCCAATGAATGCCAAGAAAATGTACAGCA...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp TACAAAGTAATTCGTGGAAGGGATTCCCTCATCACAGGTTACATAATTTCACCCGAGGATGGCGGGAACTaGAAGAGCGGCGGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: YKVIRGRDSLITGYIISPEDGGN*KSGGLQ
Trigger: CTGCAGACCGCCGCTCTTCCAGTTCCCGCCATCCTC...GGGTGAAATTATGTAACCTGTGATGAGGGAATCCCTTCCACGAATTACTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR-3UTR CCA 90 bp TGTCTCAGTTGCCTTCCACGTGATGTCCAATTAGGGACCAGCTGTACCAACCACGGTTGTGGGGATGACTaGAGAGTTCATTTATGCCCA +
Preference number: 2 (lower is better)
Translates to: CLSCLPRDVQLGTSCTNHGCGDD*RVHLCP
Trigger: TGGGCATAAATGAACTCTCCAGTCATCCCCACAACC...GTGGTTGGTACAGCTGGTCCCTAATTGGACATCACGTGGAAGGCAACTGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR TCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGGTCACAAAGTTTTCATaGGAACCCAAATGCAAATAC +
Preference number: 2 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGVTKFS*EPKCKY
Trigger: GTATTTGCATTTGGGTTCTCATGAAAACTTTGTGAC...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGGTATGTGGCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRYVAP*LANFCI
Trigger: AATACAAAAATTAGCCAGTCATGGTGCCACATACCT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370271.7
3UTR-3UTR GCA 90 bp CCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTCATTCAAGTGGCACATTTaGTGTACATTTTCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: PSHSPGNSSRRETKHGDSFKWHI*CTFSWH
Trigger: ATGCCAAGAAAATGTACAGCAAATGTGCCACTTGAA...TGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAGGGGATCTGACAACATaGCAAACTTTTGTTTCTCAA +
Preference number: 2 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTGDLTT*QTFVSQ
Trigger: TTGAGAAACAAAAGTTTGGCATGTTGTCAGATCCCC...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTAGTGCAAGCTTCGTTTaGCAAGTCCCCAAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTSASFV*QVPKVA
Trigger: GGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACT...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTGGAAACAAGGTTGTTaGAAACTTGTCCAGATCTTT +
Preference number: 2 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGWKQGC*KLVQIF
Trigger: AAAGATCTGGACAAGTTTCCAACAACCTTGTTTCCA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp AGCCTCTTGGAGAGGCGTGAAGTTACTGAAAGAGAAAACACGTCACATTCCAAACGTAGCTGTCCAGGCTaGTGGTCACTAGACCAAGAG +
Preference number: 2 (lower is better)
Translates to: SLLERREVTERENTSHSKRSCPG*WSLDQE
Trigger: CTCTTGGTCTAGTGACCACCAGCCTGGACAGCTACG...TTTGGAATGTGACGTGTTTTCTCTTTCAGTAACTTCACGCCTCTCCAAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR-3UTR GCA 90 bp CCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTCATATAAAATCTCTGACTaGCAATGCTTGATTGACATG +
Preference number: 2 (lower is better)
Translates to: PSHSPGNSSRRETKHGDSYKISD*QCLIDM
Trigger: CATGTCAATCAAGCATTGGCAGTCAGAGATTTTATA...TGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp GCAAGTTCTTTTAAGTATGAACTAGCGTGCACGCTGGACTACAAAGTAATTCGTAGCTGTCCAGGCTGGTaGTCACTAGACCAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: ASSFKYELACTLDYKVIRSCPGW*SLDQEQ
Trigger: CTGCTCTTGGTCTAGTGACCACCAGCCTGGACAGCT...ACGAATTACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTTAAAAGAACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR-3UTR TCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGCCTCTTAAGGGGATCTaGCAACATGCCAAACTTTTG +
Preference number: 2 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRPLKGI*QHAKLL
Trigger: CAAAAGTTTGGCATGTTGTCAGATCCCCTTAAGAGG...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTGTCCCCAAAGTGGCCTaGCATTCTCTGTGCAATGAA +
Preference number: 2 (lower is better)
Translates to: GLTLGASISLGSWKLDLLVPKVA*HSLCNE
Trigger: TTCATTGCACAGAGAATGTCAGGCCACTTTGGGGAC...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTAGTGCAAGCTTCGTTTaGCAAGTCCCCAAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: PLTLYHLNQRMALQCLRISASFV*QVPKVA
Trigger: GGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACT...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCGTTTGTTACTACCCCTaGGCTAAAAACAACGTGTGC +
Preference number: 2 (lower is better)
Translates to: TVILPNTPPLSASFVCQVVCYYP*AKNNVC
Trigger: GCACACGTTGTTTTTAGCCCAGGGGTAGTAACAAAC...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTGCCAAGTCCCCAAAGTaGCCTGACATTCTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIAKSPK*PDILCA
Trigger: TGCACAGAGAATGTCAGGCCACTTTGGGGACTTGGC...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATCAGTTGCCTTCCACGTaGTGTCCAATTAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYQLPST*CPIRDQ
Trigger: CTGGTCCCTAATTGGACATCACGTGGAAGGCAACTG...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR GCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTACTGGAACTTGGTCTTaGTTTCCATGTCCAACTTCT +
Preference number: 2 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTTGTWS*FPCPTS
Trigger: AGAAGTTGGACATGGAAAGCAAGACCAAGTTCCAGT...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCGCTAAAAACAACGTGTaGACTTCCACTAACCCTCTA +
Preference number: 2 (lower is better)
Translates to: TVILPNTPPLSASFVCQVAKNNV*TSTNPL
Trigger: TAGAGGGTTAGTGGAAGTGCACACGTTGTTTTTAGC...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCATCTCTGACTGCCAATaGTTGATTGACATGAGCTCA +
Preference number: 2 (lower is better)
Translates to: TVILPNTPPLSASFVCQVISDCQ*LIDMSS
Trigger: TGAGCTCATGTCAATCAAGCATTGGCAGTCAGAGAT...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTTTACGGCTACATCAATaGATTTTGTGCATGGAGAGC +
Preference number: 2 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTLRLHQ*ILCMES
Trigger: GCTCTCCATGCACAAAATGCATTGATGTAGCCGTAA...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCTTAATGCCTCGGCCTTaGCTTATGTCTTCTTGTAGT +
Preference number: 2 (lower is better)
Translates to: TVILPNTPPLSASFVCQVLMPRP*LMSSCS
Trigger: ACTACAAGAAGACATAAGGCAAGGCCGAGGCATTAA...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTGACTGGACTATGACCTaGAGTCTGAAGACCTCTACC +
Preference number: 2 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIDWTMT*SLKTST
Trigger: GGTAGAGGTCTTCAGACTCCAGGTCATAGTCCAGTC...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCACAATACAGTCTGTATaGACTGACATCATCCGAAAC +
Preference number: 2 (lower is better)
Translates to: TVILPNTPPLSASFVCQVTIQSV*TDIIRN
Trigger: GTTTCGGATGATGTCAGTTCATACAGACTGTATTGT...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR TCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAGGTGGATTAACTGGCTaGCAGGACTGCCCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: DARVSSFCQIELFVSISLGGLTG*QDCPGK
Trigger: TTTTCCTGGGCAGTCCTGTCAGCCAGTTAATCCACC...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCAACAGTCTGTATGAACTaGCATCATCCGAAACAGCCA +
Preference number: 2 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSATVCMN*HHPKQP
Trigger: TGGCTGTTTCGGATGATGTCAGTTCATACAGACTGT...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR GCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTTGTAGGACTGATACCTaGAGATTACTGGCATTAGGA +
Preference number: 2 (lower is better)
Translates to: GLTLGASISLGSWKLDLLCRTDT*RLLALG
Trigger: TCCTAATGCCAGTAATCTGCAGGTATCAGTCCTACA...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGGTCTTCATTAAAGTCTaGCTGAAGATTCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQVFIKV*LKILQG
Trigger: CCCCTGGAGAATCTTCAGCCAGACTTTAATGAAGAC...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR GCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCATTCAAGTGGCACATTTaGTGTACATTTTCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSFKWHI*CTFSWH
Trigger: ATGCCAAGAAAATGTACAGCAAATGTGCCACTTGAA...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTATGAAGGAAAATGCATaGATTGAAACCTCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIMKENA*IETSLW
Trigger: CCACAGGGAGGTTTCAATCCATGCATTTTCCTTCAT...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCATGGAAACAAGGTTGTTaGAAACTTGTCCAGATCTTT +
Preference number: 2 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSWKQGC*KLVQIF
Trigger: AAAGATCTGGACAAGTTTCCAACAACCTTGTTTCCA...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAGACTGGACTATGACCTaGAGTCTGAAGACCTCTACC +
Preference number: 2 (lower is better)
Translates to: DARVSSFCQIELFVSISLDWTMT*SLKTST
Trigger: GGTAGAGGTCTTCAGACTCCAGGTCATAGTCCAGTC...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAGAGGGAGACAAAGCATaGGGACTCAAGGGAGAAGTA +
Preference number: 2 (lower is better)
Translates to: DARVSSFCQIELFVSISLEGDKA*GLKGEV
Trigger: TACTTCTCCCTTGAGTCCCCATGCTTTGTCTCCCTC...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATTTCTCCAATTCTGATTaGGGATTTAATGCCTCGGCC +
Preference number: 2 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYFSNSD*GFNASA
Trigger: GGCCGAGGCATTAAATCCCCAATCAGAATTGGAGAA...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAATCCTGGTAACCTTCTaGATGTATAGATGTACACAA +
Preference number: 2 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSILVTF*MYRCTQ
Trigger: TTGTGTACATCTATACATCCAGAAGGTTACCAGGAT...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTATCAATAATGCCATCTaGTTGTTCAGCCTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTINNAI*LFSLFL
Trigger: AAGAAAAAGGCTGAACAACCAGATGGCATTATTGAT...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR CAA 90 bp TACATATCCATAAAATTAGACAAGGTGATTTTTGGCACAGTAATATaGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTC +
Preference number: 2 (lower is better)
Translates to: YISIKLDKVIFGTVI*PNTPPLSASFVCQV
Trigger: GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGTGCCAAAAATCACCTTGTCTAATTTTATGGATATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGGGCAGGTTAGACATATaGCTATTATTCTGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQGRLDI*LLFCFY
Trigger: GTAGAAGCAGAATAATAGTCATATGTCTAACCTGCC...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATAAACTTTTGTTGGTCTaGCTCTTGGAGCCTCAATCA +
Preference number: 2 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYKLLLV*LLEPQS
Trigger: TGATTGAGGCTCCAAGAGTCAGACCAACAAAAGTTT...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATTACAAGGGCCTAAACTaGGGTCTGGCCATTTATTTT +
Preference number: 2 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYYKGLN*GLAIYF
Trigger: AAAATAAATGGCCAGACCTCAGTTTAGGCCCTTGTA...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR GCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTCTTGTAGTTGCTTCTaGAGTTCATCTAGCCTTTGT +
Preference number: 2 (lower is better)
Translates to: PLTLYHLNQRMALQCLRISCSCF*SSSSLC
Trigger: ACAAAGGCTAGATGAACTGCAGAAGCAACTACAAGA...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR GCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTATGTCTTCTTGTAGTTaGTTCTGCAGTTCATCTAGC +
Preference number: 2 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIMSSCS*FCSSSS
Trigger: GCTAGATGAACTGCAGAAGCAACTACAAGAAGACAT...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCAAAAATTAAACCCAACTaGAACTTGGTCTTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPKIKPN*NLVLLS
Trigger: GGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTT...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATCATTAAAGTCTGGCTaGAGATTCTCCAGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: DARVSSFCQIELFVSISLSLKSG*RFSRGN
Trigger: GTTTCCCCTGGAGAATCTTCAGCCAGACTTTAATGA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR GCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTTTAGAAATTCCTTGTaGTCTTCTAAGAGGCCATCC +
Preference number: 2 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYFRNSL*SSKRPS
Trigger: GGATGGCCTCTTAGAAGAGCACAAGGAATTTCTAAA...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTTGCTGTACATTTTCTTaGCATTCATTGGATTCTGTA +
Preference number: 2 (lower is better)
Translates to: GLTLGASISLGSWKLDLLCCTFS*HSLDSV
Trigger: TACAGAATCCAATGAATGCCAAGAAAATGTACAGCA...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATCTCCTATTAAGAATCTaGTACCCAGAAGTCATGAAG +
Preference number: 2 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYLLLRI*YPEVMK
Trigger: CTTCATGACTTCTGGGTACCAGATTCTTAATAGGAG...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR TCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTGGCAGGTTAGACATATaGCTATTATTCTGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCGRLDI*LLFCFY
Trigger: GTAGAAGCAGAATAATAGTCATATGTCTAACCTGCC...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR TCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACAGAACAAACAGCATATaGATGTTCTGGCATCAAAAC +
Preference number: 2 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYRTNSI*MFWHQN
Trigger: GTTTTGATGCCAGAACATTCATATGCTGTTTGTTCT...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTATCTGCTTCAGAAATaGCAATTTCTTCATTACCAG +
Preference number: 2 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIYLLQK*QFLHYQ
Trigger: CTGGTAATGAAGAAATTGCCATTTCTGAAGCAGATA...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCATATCTGCTTCAGAAATaGCAATTTCTTCATTACCAG +
Preference number: 2 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSAYLLQK*QFLHYQ
Trigger: CTGGTAATGAAGAAATTGCCATTTCTGAAGCAGATA...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CAA 90 bp ACTTACAAGTACCTTAATGTGCAGCTTGCAAGAAGGGTAATAAGTTaGCCATACATATCCATAAAATTAGACAAGGTGATTTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: TYKYLNVQLARRVIS*PYISIKLDKVIFGT
Trigger: TGTGCCAAAAATCACCTTGTCTAATTTTATGGATATGTATGGCAAACTTATTACCCTTCTTGCAAGCTGCACATTAAGGTACTTGTAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATTGGAAGAAAAACCATaGGCTACTTGTGCTAAAAGA +
Preference number: 2 (lower is better)
Translates to: DARVSSFCQIELFVSISLLEEKP*ATCAKR
Trigger: TCTTTTAGCACAAGTAGCCCATGGTTTTTCTTCCAA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR TCA 72 bp GGGCGGGGATTTGCCAGGCCCCGAAATGCCAACGCCTaGGCTCGCGGAGGATGGCGGGAACTGGAAGAGCGG +
Preference number: 3 (lower is better)
Translates to: GRGFARPRNANA*ARGGWRELEER
Trigger: CCGCTCTTCCAGTTCCCGCCATCCTCCGCGAGCTCAGGCGTTGGCATTTCGGGGCCTGGCAAATCCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR GCA 72 bp ACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTaGCTCCTTAGCGACAAACCACCACAGTCATCCCCT +
Preference number: 3 (lower is better)
Translates to: TALRAPPPGPYC*LLSDKPPQSSP
Trigger: AGGGGATGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCCCAACCTCAGCCTGTaGAGTAGCTGGGACCATAGG +
Preference number: 3 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPPNLSL*SSWDHR
Trigger: CCTATGGTCCCAGCTACTCAACAGGCTGAGGTTGGG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
3UTR TCA 72 bp CCTTGGGCTCAGGTGATCCTCCCAACCTCAGCCTGTTaGGTAGCTGGGACCATAGGTATGTGGCACCATGAC +
Preference number: 3 (lower is better)
Translates to: PWAQVILPTSAC*VAGTIGMWHHD
Trigger: GTCATGGTGCCACATACCTATGGTCCCAGCTACTCAACAGGCTGAGGTTGGGAGGATCACCTGAGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
3UTR CCA 72 bp TACCTAAGGCGGGTTCTCCGTAGCTGTCCAGGCTGGTaGTCACTAGACCAAGAGCAGCTGCCCAACTACAGA +
Preference number: 3 (lower is better)
Translates to: YLRRVLRSCPGW*SLDQEQLPNYR
Trigger: TCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGGACAGCTACGGAGAACCCGCCTTAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR CCA 72 bp TTCTACCTAAGGCGGGTTCTCCGTAGCTGTCCAGGCTaGTGGTCACTAGACCAAGAGCAGCTGCCCAACTAC +
Preference number: 3 (lower is better)
Translates to: FYLRRVLRSCPG*WSLDQEQLPNY
Trigger: GTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGGACAGCTACGGAGAACCCGCCTTAGGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR-3UTR CAA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCAGGAAAATGCATGGATaGAAACCTCCCTGTGGTTTA +
Preference number: 3 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLRKMHG*KPPCGL
Trigger: TAAACCACAGGGAGGTTTCAATCCATGCATTTTCCT...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTTTGGCACAGTAATATaGCCAAACACACCACCACTC +
Preference number: 3 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGFGTVI*PNTPPL
Trigger: GAGTGGTGGTGTGTTTGGCAATATTACTGTGCCAAA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCAAAGCAAGCTACTATTaGCGCTTGAAAGCAGAAACA +
Preference number: 3 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLKASYY*RLKAET
Trigger: TGTTTCTGCTTTCAAGCGCAAATAGTAGCTTGCTTT...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCCACAAAGTGTTTCCGTaGTCCAGAAGAAAAAGAATG +
Preference number: 3 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLHKVFP*SRRKRM
Trigger: CATTCTTTTTCTTCTGGACAACGGAAACACTTTGTG...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CAA 90 bp CCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTCATCTGACTGCCAATGCTaGATTGACATGAGCTCAAAA +
Preference number: 3 (lower is better)
Translates to: PSHSPGNSSRRETKHGDSSDCQC*IDMSSK
Trigger: TTTTGAGCTCATGTCAATCAAGCATTGGCAGTCAGA...TGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 72 bp CACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTaGCCTGACATTCTCTGTGCAATGAACATTTCTCCC +
Preference number: 3 (lower is better)
Translates to: HSVQASFAKSPK*PDILCAMNISP
Trigger: GGGAGAAATGTTCATTGCACAGAGAATGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTTTTTCTACAGCACTTaGTCCAATAAAACCAGAGTC +
Preference number: 3 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGFFYST*SNKTRV
Trigger: GACTCTGGTTTTATTGGACAAAGTGCTGTAGAAAAA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CAA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACATTGCTGTACATTTTCTaGGCATTCATTGGATTCTGT +
Preference number: 3 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTLLYIF*AFIGFC
Trigger: ACAGAATCCAATGAATGCCAAGAAAATGTACAGCAA...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp CCAACCACAGGAGGTTGTGGGGATGACTGGAGAGTTCATTTATGCCCAGACAGAATGGAAACAAGGTTGTaGGAAACTTGTCCAGATCTT +
Preference number: 3 (lower is better)
Translates to: PTTGGCGDDWRVHLCPDRMETRL*ETCPDL
Trigger: AAGATCTGGACAAGTTTCCAACAACCTTGTTTCCAT...TCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CAA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTATTCAAGTGGCACATTaGCTGTACATTTTCTTGGCA +
Preference number: 3 (lower is better)
Translates to: PQLETLEHSGEQVTQANTIQVAH*LYIFLA
Trigger: TGCCAAGAAAATGTACAGCAAATGTGCCACTTGAAT...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAAACCCAACTGGAACTaGGTCTTGCTTTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSKPNWN*VLLSMS
Trigger: GGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTT...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR TCA 72 bp GACCTCTACCAGAGTCATAAATACAAGGGCCTAAACTaGGGTCTGGCCATTTATTTTAGAGGGACCATGAAG +
Preference number: 3 (lower is better)
Translates to: DLYQSHKYKGLN*GLAIYFRGTMK
Trigger: CTTCATGGTCCCTCTAAAATAAATGGCCAGACCTCAGTTTAGGCCCTTGTATTTATGACTCTGGTAGAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR GCA 72 bp TTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATaGCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTT +
Preference number: 3 (lower is better)
Translates to: LQNESPHRWADR*QSFKLLSNRTL
Trigger: AAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 72 bp CAAAGGATTAAATTACAGAACGAAAGCCCCCATCGTTaGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCA +
Preference number: 3 (lower is better)
Translates to: QRIKLQNESPHR*ADRCQSFKLLS
Trigger: TGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAATCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 72 bp TTCATATTTTTGCTGCTGCAACTCCTATTAAGAATCTaGTACCCAGAAGTCATGAAGCTGCCCCTGAGTAGG +
Preference number: 3 (lower is better)
Translates to: FIFLLLQLLLRI*YPEVMKLPLSR
Trigger: CCTACTCAGGGGCAGCTTCATGACTTCTGGGTACCAGATTCTTAATAGGAGTTGCAGCAGCAAAAATATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR-3UTR CAA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTACAGTGCAAGCTTCGTTaGCCAAGTCCCCAAAGTGGC +
Preference number: 3 (lower is better)
Translates to: DARVSSFCQIELFVSISLQCKLR*PSPQSG
Trigger: GCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTG...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTCTCCAACTCAGTAGCTaGTTTAATGGGCTACCTCTT +
Preference number: 3 (lower is better)
Translates to: GLTLGASISLGSWKLDLLLQLSS*FNGLPL
Trigger: AAGAGGTAGCCCATTAAACAAGCTACTGAGTTGGAG...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR GCA 72 bp CAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTaGTTTCCATGTCCAACTTCTCAAGTTAGTCCAAGC +
Preference number: 3 (lower is better)
Translates to: QEGKLNPTGTWS*FPCPTSQVSPS
Trigger: GCTTGGACTAACTTGAGAAGTTGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR GCA 72 bp AGAGTTTGTTACTACCCCTGGGCTAAAAACAACGTGTaGACTTCCACTAACCCTCTACCATTTAAACCAAAG +
Preference number: 3 (lower is better)
Translates to: RVCYYPWAKNNV*TSTNPLPFKPK
Trigger: CTTTGGTTTAAATGGTAGAGGGTTAGTGGAAGTGCACACGTTGTTTTTAGCCCAGGGGTAGTAACAAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 72 bp GAGAACCCAAATGCAAATACTGACTGGACTATGACCTaGAGTCTGAAGACCTCTACCAGAGTCATAAATACA +
Preference number: 3 (lower is better)
Translates to: ENPNANTDWTMT*SLKTSTRVINT
Trigger: TGTATTTATGACTCTGGTAGAGGTCTTCAGACTCCAGGTCATAGTCCAGTCAGTATTTGCATTTGGGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CCA 72 bp CAAAGTTTTCATGAGAACCCAAATGCAAATACTGACTaGACTATGACCTGGAGTCTGAAGACCTCTACCAGA +
Preference number: 3 (lower is better)
Translates to: QSFHENPNANTD*TMTWSLKTSTR
Trigger: TCTGGTAGAGGTCTTCAGACTCCAGGTCATAGTCCAGTCAGTATTTGCATTTGGGTTCTCATGAAAACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGTTGCTGTACATTTTCTaGGCATTCATTGGATTCTGT +
Preference number: 3 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRLLYIF*AFIGFC
Trigger: ACAGAATCCAATGAATGCCAAGAAAATGTACAGCAA...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCACTCATGGAAACAAGGTaGTTGGAAACTTGTCCAGAT +
Preference number: 3 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPLMETR*LETCPD
Trigger: ATCTGGACAAGTTTCCAACAACCTTGTTTCCATGAG...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR GCA 72 bp TCCAAATCTGCAAGTTCTTTTAAGTATGAACTAGCGTaGACGCTGGACTACAAAGTAATTCGTGGAAGGGAT +
Preference number: 3 (lower is better)
Translates to: SKSASSFKYELA*TLDYKVIRGRD
Trigger: ATCCCTTCCACGAATTACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTTAAAAGAACTTGCAGATTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
3UTR-3UTR CAA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGAGGAAAATGCATGGATaGAAACCTCCCTGTGGTTTA +
Preference number: 3 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQRKMHG*KPPCGL
Trigger: TAAACCACAGGGAGGTTTCAATCCATGCATTTTCCT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTAACTGGAACTTGGTCTaGCTTTCCATGTCCAACTTC +
Preference number: 3 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCNWNLV*LSMSNF
Trigger: GAAGTTGGACATGGAAAGCAAGACCAAGTTCCAGTT...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAAAACCCAACTGGAACTaGGTCTTGCTTTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: DARVSSFCQIELFVSISLKPNWN*VLLSMS
Trigger: GGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTT...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACATTCAAGTGGCACATTaGCTGTACATTTTCTTGGCA +
Preference number: 3 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYIQVAH*LYIFLA
Trigger: TGCCAAGAAAATGTACAGCAAATGTGCCACTTGAAT...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATATGGAAACAAGGTTGTaGGAAACTTGTCCAGATCTT +
Preference number: 3 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYMETRL*ETCPDL
Trigger: AAGATCTGGACAAGTTTCCAACAACCTTGTTTCCAT...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAACAGCAGCTGTGGTTTaGAAGTGCAACAACTTCAAG +
Preference number: 3 (lower is better)
Translates to: DARVSSFCQIELFVSISLTAAVV*KCNNFK
Trigger: CTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGT...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR TCA 72 bp GTACTTAAAATCTGCACTGACACAATACAGTCTGTATaGACTGACATCATCCGAAACAGCCACTTTAACACA +
Preference number: 3 (lower is better)
Translates to: VLKICTDTIQSV*TDIIRNSHFNT
Trigger: TGTGTTAAAGTGGCTGTTTCGGATGATGTCAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR GCA 72 bp ATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTaGCAAAATTATATACTCATGGAAACAAGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: IHRHSVPKNSGV*QNYILMETRLL
Trigger: CAACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATCTGACTGCCAATGCTaGATTGACATGAGCTCAAAA +
Preference number: 3 (lower is better)
Translates to: DARVSSFCQIELFVSISLSDCQC*IDMSSK
Trigger: TTTTGAGCTCATGTCAATCAAGCATTGGCAGTCAGA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTGACGTTCTAAGGTATTaGTGTAAGTTCCAGGATGAA +
Preference number: 3 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCDVLRY*CKFQDE
Trigger: TTCATCCTGGAACTTACACAAATACCTTAGAACGTC...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR GCA 72 bp CTGGATTTACTTAGTCTTCCCTATAAAATCTCTGACTaGCAATGCTTGATTGACATGAGCTCAAAAGTTACT +
Preference number: 3 (lower is better)
Translates to: LDLLSLPYKISD*QCLIDMSSKVT
Trigger: AGTAACTTTTGAGCTCATGTCAATCAAGCATTGGCAGTCAGAGATTTTATAGGGAAGACTAAGTAAATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR-3UTR CAA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGTTCTTTAGAAATTCCTaGTGCTCTTCTAAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: FPSMYLKSALTQYSLYELFFRNS*CSSKRP
Trigger: TGGCCTCTTAGAAGAGCACAAGGAATTTCTAAAGAA...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR CCA 72 bp AATTACTCTTGGCTTAAAGACGCCACACATTATTACTaGCCAGTCCCCACCAATTATATTTGTTTTGATAAA +
Preference number: 3 (lower is better)
Translates to: NYSWLKDATHYY*PVPTNYICFDK
Trigger: TTTATCAAAACAAATATAATTGGTGGGGACTGGCCAGTAATAATGTGTGGCGTCTTTAAGCCAAGAGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCACTACCGGGTCTCAGATaGCAGCGCGGGGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSLPGLR*QRGGDD
Trigger: GTCGTCGCCCCCGCGCTGCCATCTGAGACCCGGTAG...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTCATCATGTCGGCGCCGCTaGCGACGGCGGCATGAGCCG +
Preference number: 4 (lower is better)
Translates to: PSHSPGNSSRRETKHGDSSCRRR*RRRHEP
Trigger: CGGCTCATGCCGCCGTCGCCAGCGGCGCCGACATGA...TGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GCGGGGATTTGCCAGGCCCCGAAATGCCAACGCCTGAGCTCGCGGAGGATGGCGCGTAGCTGTCCAGGCTaGTGGTCACTAGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: AGICQAPKCQRLSSRRMARSCPG*WSLDQE
Trigger: CTCTTGGTCTAGTGACCACCAGCCTGGACAGCTACG...CGCCATCCTCCGCGAGCTCAGGCGTTGGCATTTCGGGGCCTGGCAAATCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR GCA 90 bp GAAATGCCAACGCCTGAGCTCGCGGAGGATGGCGGGAACTGGAAGAGCGGCGGTGCTGGAGAAGTTGGGTaGGTGGTTGCCGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EMPTPELAEDGGNWKSGGAGEVG*VVAVLL
Trigger: CAGCAAGACGGCAACCACGCACCCAACTTCTCCAGC...ACCGCCGCTCTTCCAGTTCCCGCCATCCTCCGCGAGCTCAGGCGTTGGCATTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTCATGTCGGCGCCGCTaGCGACGGCGGCATGAGCCG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSCRRR*RRRHEP
Trigger: CGGCTCATGCCGCCGTCGCCAGCGGCGCCGACATGA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGCTACCGGGTCTCAGATaGCAGCGCGGGGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGLPGLR*QRGGDD
Trigger: GTCGTCGCCCCCGCGCTGCCATCTGAGACCCGGTAG...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTACCGGGTCTCAGATaGCAGCGCGGGGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLPGLR*QRGGDD
Trigger: GTCGTCGCCCCCGCGCTGCCATCTGAGACCCGGTAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp CCAGGCTGGTGGTCACTAGACCAAGAGCAGCTGCCCAACTACAGAGAAGCAAACCTACCGGGTCTCAGATaGCAGCGCGGGGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: PGWWSLDQEQLPNYREANLPGLR*QRGGDD
Trigger: GTCGTCGCCCCCGCGCTGCCATCTGAGACCCGGTAG...GTTTGCTTCTCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTGGCGACGGCGGCATaGGCCGTGGCTGGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLATAA*AVAGEV
Trigger: AACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp CGTAGCTGTCCAGGCTGGTGGTCACTAGACCAAGAGCAGCTGCCCAACTACAGATGGTTGCCGTCTTGCTaGTGGGACTCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSCPGWWSLDQEQLPNYRWLPSC*WDSGRL
Trigger: CAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCA...TCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGGACAGCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR GCA 90 bp CCAGGCTGGTGGTCACTAGACCAAGAGCAGCTGCCCAACTACAGAGAAGCAAACTGCCAGGCCCCGAAATaGCAACGCCTGAGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PGWWSLDQEQLPNYREANCQAPK*QRLSSR
Trigger: CCGCGAGCTCAGGCGTTGGCATTTCGGGGCCTGGCA...GTTTGCTTCTCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCGGCGGCATGAGCCGTaGCTGGAGAAGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRRHEP*LEKLGA
Trigger: CGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTTCCGGGTGGTGCCTaGACAGGCTGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLPGGA*TGCSCC
Trigger: GCAGCAGGAGCAGCCTGTCCAGGCACCACCCGGAAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCAGGAGTGCCATATTCTaGGCGCAAAGGTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLRSAIF*AQRSPR
Trigger: TCTGGGGGACCTTTGCGCTCAGAATATGGCACTCCT...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCCACCCAGGCTGCAGTaGAGTGGCGCCATCACGACT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPPPRLQ*SGAITT
Trigger: AGTCGTGATGGCGCCACTTCACTGCAGCCTGGGTGG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp TCACTTTCTTTCTACCTAAGGCGGGTTCTCCGTAGCTGTCCAGGCTGGTGGTCACGAAATGCCAACGCCTaGGCTCGCGGAGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: SLSFYLRRVLRSCPGWWSRNANA*ARGGWR
Trigger: CCGCCATCCTCCGCGAGCTCAGGCGTTGGCATTTCG...TGACCACCAGCCTGGACAGCTACGGAGAACCCGCCTTAGGTAGAAAGAAAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTGGTTGCCGTCTTGCTaGTGGGACTCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPWLPSC*WDSGRL
Trigger: CAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAGCTAACTGCTCTACGTaGCCCGCCGCCTGGACCCTA +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTANCST*PAAWTL
Trigger: TAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGC...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTGCCGTCTTGCTGCTaGGACTCCGGGAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLPSCC*DSGRLS
Trigger: CGACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp CCAGGCTGGTGGTCACTAGACCAAGAGCAGCTGCCCAACTACAGAGAAGCAAACTTGCCGTCTTGCTGCTaGGACTCCGGGAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PGWWSLDQEQLPNYREANLPSCC*DSGRLS
Trigger: CGACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAA...GTTTGCTTCTCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR TCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCCAGTTGCCTTCCACGTaGTGTCCAATTAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLQLPST*CPIRDQ
Trigger: CTGGTCCCTAATTGGACATCACGTGGAAGGCAACTG...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CGTAGCTGTCCAGGCTGGTGGTCACTAGACCAAGAGCAGCTGCCCAACTACAGAAGTTGGGTGCGTGGTTaGCGTCTTGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: RSCPGWWSLDQEQLPNYRSWVRG*RLAAGT
Trigger: AGTCCCAGCAGCAAGACGGCAACCACGCACCCAACT...TCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGGACAGCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTTTCTTCCGGGTGGTaGCTGGACAGGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLSSGW*LDRLLL
Trigger: CAGGAGCAGCCTGTCCAGGCACCACCCGGAAGAAAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGGCATGAGCCGTGGCTaGAGAAGTTGGGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPGMSRG*RSWVRG
Trigger: ACCACGCACCCAACTTCTCCAGCCACGGCTCATGCC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTTCCCGCTGCAGCATaGGCGGTACTACCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPFPAAA*AVLPGL
Trigger: GAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCGAAAGCCCCCATCGTTaGGCAGATAGATGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLESPHR*ADRCQS
Trigger: ACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTC...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCAGGCTGCAGTGAAGTaGCGCCATCACGACTCACCG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPQAAVK*RHHDSP
Trigger: CGGTGAGTCGTGATGGCGCCACTTCACTGCAGCCTG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCCAGACAAGGCCGACGTaGCTCATGTATACCATGATC +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLQTRPT*LMYTMI
Trigger: GATCATGGTATACATGAGTCACGTCGGCCTTGTCTG...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAAGAATTGCCAGAATTTaGAGGTGCCAAGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSRIARI*RCQACR
Trigger: TCTGCAGGCTTGGCACCTTCAAATTCTGGCAATTCT...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGTTGGGTGCGTGGTTaGCGTCTTGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSWVRG*RLAAGT
Trigger: AGTCCCAGCAGCAAGACGGCAACCACGCACCCAACT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGCTGGAGAAGTTGGGTaGGTGGTTGCCGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPAGEVG*VVAVLL
Trigger: CAGCAAGACGGCAACCACGCACCCAACTTCTCCAGC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCGTGGCTGGAGAAGTTaGGTGCGTGGTTGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRGWRS*VRGCRL
Trigger: AAGACGGCAACCACGCACCCAACTTCTCCAGCCACG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTACGTGCCCCGCCGCCTaGACCCTACTGTTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTTCPAA*TLLLPP
Trigger: AGGAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGT...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGGAGTGCCATATTCTaGGCGCAAAGGTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRSAIF*AQRSPR
Trigger: TCTGGGGGACCTTTGCGCTCAGAATATGGCACTCCT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAGTAGCTGCAGGAGTCTaGTTGAAGTTCAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSVAAGV*LKFKAI
Trigger: AATGGCTTTGAACTTCAATCAGACTCCTGCAGCTAC...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCTGCTACATCAGACAATaGTGGGATCCATGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLCYIRQ*WDPWPN
Trigger: GTTTGGCCATGGATCCCATCATTGTCTGATGTAGCA...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCATCATTAAAGTCTGGCTaGAGATTCTCCAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSSLKSG*RFSRGN
Trigger: GTTTCCCCTGGAGAATCTTCAGCCAGACTTTAATGA...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTTGGTTGCCGTCTTGCTaGTGGGACTCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTWLPSC*WDSGRL
Trigger: CAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCA...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTGTTCTCTTTCCCGCTaGAGCATGGGCGGTACTACC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPCSLSR*SMGGTT
Trigger: GGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAGGTAAGTGGGGTTTCTaGATCTTAGTCTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSGKWGF*ILVSLV
Trigger: TACCAAGGAGACTAAGATGCAGAAACCCCACTTACC...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTCAAGTGCAAGCTTCGTTTaGCAAGTCCCCAAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PSHSPGNSSRRETKHGDSSASFV*QVPKVA
Trigger: GGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACT...TGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTTTGCCGTCTTGCTGCTaGGACTCCGGGAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTLPSCC*DSGRLS
Trigger: CGACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAA...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGGAATTTAGCTCCCAGTaGGCTTTCTTCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGEFSSQ*AFFRVV
Trigger: CACCACCCGGAAGAAAGCCCACTGGGAGCTAAATTC...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCACCTGCCACTTGGATTTaGTCACTATTCCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSPATWI*SLFLVE
Trigger: TTCTACCAGGAATAGTGACCAAATCCAAGTGGCAGG...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCAGGCTGGTGGTCACTAGACCAAGAGCAGCTGCCCAACTACAGAGAAGCAAACAGCTGTCCAGGCTGGTaGTCACTAGACCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGWWSLDQEQLPNYREANSCPGW*SLDQEQ
Trigger: CTGCTCTTGGTCTAGTGACCACCAGCCTGGACAGCT...GTTTGCTTCTCTGTAGTTGGGCAGCTGCTCTTGGTCTAGTGACCACCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR TCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCTGGCGACGGCGGCATaGGCCGTGGCTGGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVLATAA*AVAGEV
Trigger: AACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAG...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCGTAGCTGCAGGAGTCTaGTTGAAGTTCAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLVAAGV*LKFKAI
Trigger: AATGGCTTTGAACTTCAATCAGACTCCTGCAGCTAC...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCTCATTAAAGTCTGGCTaGAGATTCTCCAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLSLKSG*RFSRGN
Trigger: GTTTCCCCTGGAGAATCTTCAGCCAGACTTTAATGA...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TCACTTTCTTTCTACCTAAGGCGGGTTCTCCGTAGCTGTCCAGGCTGGTGGTCATGTTCTCTTTCCCGCTaGAGCATGGGCGGTACTACC +
Preference number: 4 (lower is better)
Translates to: SLSFYLRRVLRSCPGWWSCSLSR*SMGGTT
Trigger: GGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACA...TGACCACCAGCCTGGACAGCTACGGAGAACCCGCCTTAGGTAGAAAGAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR GCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCGGTAAGTGGGGTTTCTaGATCTTAGTCTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLGKWGF*ILVSLV
Trigger: TACCAAGGAGACTAAGATGCAGAAACCCCACTTACC...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCAGGCTTTCCTGTAGCTaGAGGAGTCTGATTGAAGTT +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLRLSCS*RSLIEV
Trigger: AACTTCAATCAGACTCCTGCAGCTACAGGAAAGCCT...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCGGCGGCATGAGCCGTaGCTGGAGAAGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVRRHEP*LEKLGA
Trigger: CGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCG...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TCTTTTAAGTATGAACTAGCGTGCACGCTGGACTACAAAGTAATTCGTGGAAGGTCATGTCGGCGCCGCTaGCGACGGCGGCATGAGCCG +
Preference number: 4 (lower is better)
Translates to: SFKYELACTLDYKVIRGRSCRRR*RRRHEP
Trigger: CGGCTCATGCCGCCGTCGCCAGCGGCGCCGACATGA...CCTTCCACGAATTACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTTTTCCCGCTGCAGCATaGGCGGTACTACCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTFPAAA*AVLPGL
Trigger: GAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAA...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTCCGGGTGGTGCCTaGACAGGCTGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTLPGGA*TGCSCC
Trigger: GCAGCAGGAGCAGCCTGTCCAGGCACCACCCGGAAG...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGAATTTAGCTCCCAGTaGGCTTTCTTCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPEFSSQ*AFFRVV
Trigger: CACCACCCGGAAGAAAGCCCACTGGGAGCTAAATTC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGGTGCTGCAGGGCTTaGGATACATGGCACAACTTC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRCCRA*DTWHNF
Trigger: GAAGTTGTGCCATGTATCCCAAGCCCTGCAGCACCT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCAGACAAGGCCGACGTaGCTCATGTATACCATGATC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPQTRPT*LMYTMI
Trigger: GATCATGGTATACATGAGTCACGTCGGCCTTGTCTG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGCCCAAATGCAAATACTaGCTGGACTATGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGPKCKY*LDYDLE
Trigger: CTCCAGGTCATAGTCCAGTCAGTATTTGCATTTGGG...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGAAACCTTCCAAAAGGTaGCAAAGGCACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGKPSKR*QRHHCH
Trigger: ATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTT...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCATCTCTGACTGCCAATaGTTGATTGACATGAGCTCA +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLISDCQ*LIDMSS
Trigger: TGAGCTCATGTCAATCAAGCATTGGCAGTCAGAGAT...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTCACCCAGATTGGAGTaGAGTGGCTCAATCACAGCT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSPRLE*SGSITA
Trigger: AGCTGTGATTGAGCCACTGCACTCCAATCTGGGTGA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp AGCCTCTTGGAGAGGCGTGAAGTTACTGAAAGAGAAAACACGTCACATTCCAAAGGAAGAGCGGCGGTCTaGAGCCCTCCCCTCATACCC +
Preference number: 4 (lower is better)
Translates to: SLLERREVTERENTSHSKGRAAV*SPPLIP
Trigger: GGGTATGAGGGGAGGGCTGCAGACCGCCGCTCTTCC...TTTGGAATGTGACGTGTTTTCTCTTTCAGTAACTTCACGCCTCTCCAAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGGGCTTGGGATACATaGCACAACTTCCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRAWDT*HNFQSS
Trigger: GCTGCTTTGGAAGTTGTGCCATGTATCCCAAGCCCT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp CCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTCACTTCCTAAGAGCTGGTaGATTAACTGGCTGACAGGA +
Preference number: 4 (lower is better)
Translates to: PSHSPGNSSRRETKHGDSLPKSW*INWLTG
Trigger: TCCTGTCAGCCAGTTAATCCACCAGCTCTTAGGAAG...TGAGTCCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTTCTGGAGCTGTTATTaGAGATGTCAGCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGFWSCY*RCQLLP
Trigger: TGGCAGAAGCTGACATCTTCAATAACAGCTCCAGAA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGAATTGCCAGAATTTaGAGGTGCCAAGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRIARI*RCQACR
Trigger: TCTGCAGGCTTGGCACCTTCAAATTCTGGCAATTCT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCACAATACAGTCTGTATaGACTGACATCATCCGAAAC +
Preference number: 4 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLTIQSV*TDIIRN
Trigger: GTTTCGGATGATGTCAGTTCATACAGACTGTATTGT...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAAGAACAAACAGCATATaGATGTTCTGGCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSRTNSI*MFWHQN
Trigger: GTTTTGATGCCAGAACATTCATATGCTGTTTGTTCT...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCAGCGTGGTTGCCGTCTTaGTGCTGGGACTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPAWLPS*CWDSGR
Trigger: CCTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGC...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCTTTCTTCCGGGTGGTaGCTGGACAGGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVLSSGW*LDRLLL
Trigger: CAGGAGCAGCCTGTCCAGGCACCACCCGGAAGAAAG...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAAGTCTCCTTGGTACCTaGCACTTGGATTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTSLLGT*HLDLVT
Trigger: AGTGACCAAATCCAAGTGGCAGGTACCAAGGAGACT...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGTCTCCTTGGTACCTaGCACTTGGATTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSLLGT*HLDLVT
Trigger: AGTGACCAAATCCAAGTGGCAGGTACCAAGGAGACT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCGGCATGAGCCGTGGCTaGAGAAGTTGGGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVGMSRG*RSWVRG
Trigger: ACCACGCACCCAACTTCTCCAGCCACGGCTCATGCC...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CAAAGTAATTCGTGGAAGGGATTCCCTCATCACAGGTTACATAATTTCACCCACCGGCGGCATGAGCCGTaGCTGGAGAAGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: QSNSWKGFPHHRLHNFTHRRHEP*LEKLGA
Trigger: CGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCG...GTGGGTGAAATTATGTAACCTGTGATGAGGGAATCCCTTCCACGAATTACTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGTCGGCGCCGCTaGCGACGGCGGCATGAGCCG +
Preference number: 4 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYSCRRR*RRRHEP
Trigger: CGGCTCATGCCGCCGTCGCCAGCGGCGCCGACATGA...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGGGCTCTTTTCTGGTaGCACCCTTTTGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRALFW*HPFGFR
Trigger: TCTAAACCCAAAAGGGTGCCACCAGAAAAGAGCCCT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGAAGCTAGTGACAACTaGAATTTAGCTCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPEASDN*NLAPSG
Trigger: CCCACTGGGAGCTAAATTCCAGTTGTCACTAGCTTC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTTCTCCAATTCTGATTaGGGATTTAATGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGFSNSD*GFNASA
Trigger: GGCCGAGGCATTAAATCCCCAATCAGAATTGGAGAA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAATCCTGGTAACCTTCTaGATGTATAGATGTACACAA +
Preference number: 4 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSILVTF*MYRCTQ
Trigger: TTGTGTACATCTATACATCCAGAAGGTTACCAGGAT...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CTGGACTACAAAGTAATTCGTGGAAGGGATTCCCTCATCACAGGTTACATAATTCTGGCGACGGCGGCATaGGCCGTGGCTGGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LDYKVIRGRDSLITGYIILATAA*AVAGEV
Trigger: AACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAG...AATTATGTAACCTGTGATGAGGGAATCCCTTCCACGAATTACTTTGTAGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR TCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGCTGGCGACGGCGGCATaGGCCGTGGCTGGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQLATAA*AVAGEV
Trigger: AACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAG...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTCTGGAGCTGTTATTaGAGATGTCAGCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPFWSCY*RCQLLP
Trigger: TGGCAGAAGCTGACATCTTCAATAACAGCTCCAGAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGTAGCTGCAGGAGTCTaGTTGAAGTTCAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPVAAGV*LKFKAI
Trigger: AATGGCTTTGAACTTCAATCAGACTCCTGCAGCTAC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTTGGTTGCCGTCTTGCTaGTGGGACTCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLTLGASISLGSWKLDLLWLPSC*WDSGRL
Trigger: CAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCA...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGAGTTGGGTGCGTGGTTaGCGTCTTGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRSWVRG*RLAAGT
Trigger: AGTCCCAGCAGCAAGACGGCAACCACGCACCCAACT...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGGCTGGAGAAGTTGGGTaGGTGGTTGCCGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRAGEVG*VVAVLL
Trigger: CAGCAAGACGGCAACCACGCACCCAACTTCTCCAGC...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGAGTTTCCTTTCAAACTaGTCTGTCCCAGTGATAGAC +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGSFLSN*SVPVID
Trigger: GTCTATCACTGGGACAGAGCAGTTTGAAAGGAAACT...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTGCTTTTTGGAGTCTaGATTGGTTTTGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLLFGV*IGFASI
Trigger: GATCGAGGCAAAACCAATGCAGACTCCAAAAAGCAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGAAGATGTCAGCTTCTaGCACTGTGGTCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPEDVSF*HCGLLF
Trigger: AAAAAGCAGACCACAGTGGCAGAAGCTGACATCTTC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTCGGAGTTGATTCTCTaGTCCATTTGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSELIL*SICSFL
Trigger: GAGAAAGGAGCAAATGGAGCAGAGAATCAACTCCGA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAATGGTGGCCAGAATTaGCAGAATTTGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPNGGQN*QNLKVP
Trigger: TGGCACCTTCAAATTCTGGCAATTCTGGCCACCATT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGGTAAGTGGGGTTTCTaGATCTTAGTCTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPGKWGF*ILVSLV
Trigger: TACCAAGGAGACTAAGATGCAGAAACCCCACTTACC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGGCTTTCCTGTAGCTaGAGGAGTCTGATTGAAGTT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRLSCS*RSLIEV
Trigger: AACTTCAATCAGACTCCTGCAGCTACAGGAAAGCCT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACTGGAACTTGGTCTTaGTTTCCATGTCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGTGTWS*FPCPTS
Trigger: AGAAGTTGGACATGGAAAGCAAGACCAAGTTCCAGT...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTTACGGCTACATCAATaGATTTTGTGCATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGLRLHQ*ILCMES
Trigger: GCTCTCCATGCACAAAATGCATTGATGTAGCCGTAA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAATAGGGCTCTTTTCTaGTGGCACCCTTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPNRALF*WHPFGF
Trigger: AAACCCAAAAGGGTGCCACCAGAAAAGAGCCCTATT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTGTGGTCTGCTTTTTaGAGTCTGCATTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLWSAF*SLHWFC
Trigger: GCAAAACCAATGCAGACTCCAAAAAGCAGACCACAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCCTGCCACTTGGATTTaGTCACTATTCCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPPATWI*SLFLVE
Trigger: TTCTACCAGGAATAGTGACCAAATCCAAGTGGCAGG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCACTGCTACCTGCATTaGAATTTCCTGAACTCTCTC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPHCYLH*NFLNSL
Trigger: GAGAGAGTTCAGGAAATTCCAATGCAGGTAGCAGTG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp TGTCTCAGTTGCCTTCCACGTGATGTCCAATTAGGGACCAGCTGTACCAACCACGAGGGAGACAAAGCATaGGGACTCAAGGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: CLSCLPRDVQLGTSCTNHEGDKA*GLKGEV
Trigger: TACTTCTCCCTTGAGTCCCCATGCTTTGTCTCCCTC...GTGGTTGGTACAGCTGGTCCCTAATTGGACATCACGTGGAAGGCAACTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAGCCACACATTATTACTaGCCAGTCCCCACCAATTAT +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTATHYY*PVPTNY
Trigger: ATAATTGGTGGGGACTGGCCAGTAATAATGTGTGGC...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CAA 72 bp ATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTaGCCAAGTCCCCAAAGTGGCCTGACATTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IAKHTTTQCKLR*PSPQSGLTFSV
Trigger: CACAGAGAATGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAAAGAATTCTCGGAGTTaGTTCTCTGCTCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTKNSRS*FSAPFA
Trigger: AGCAAATGGAGCAGAGAATCAACTCCGAGAATTCTT...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAAGAATTCTCGGAGTTaGTTCTCTGCTCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPKNSRS*FSAPFA
Trigger: AGCAAATGGAGCAGAGAATCAACTCCGAGAATTCTT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGATAAATTTTTCTTTCTaGTGTGGTCCATCAGGACGC +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGINFSF*CGPSGR
Trigger: GCGTCCTGATGGACCACATCAGAAAGAAAAATTTAT...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGAAGGAGTGCCATATTCTaGGCGCAAAGGTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGRSAIF*AQRSPR
Trigger: TCTGGGGGACCTTTGCGCTCAGAATATGGCACTCCT...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCAACCACAGGAGGTTGTGGGGATGACTGGAGAGTTCATTTATGCCCAGACAGACCATGGCCAAACTGGTaGGTCACTGAAGGTATCATT +
Preference number: 4 (lower is better)
Translates to: PTTGGCGDDWRVHLCPDRPWPNW*VTEGII
Trigger: AATGATACCTTCAGTGACTCACCAGTTTGGCCATGG...TCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR GCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGTGTTCTCTTTCCCGCTaGAGCATGGGCGGTACTACC +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRCSLSR*SMGGTT
Trigger: GGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACA...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAAATCTATAATTGACTaGTTCCTGTCCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPKSIID*FLSPGL
Trigger: GAGTCCTGGGGACAGGAAGCAGTCAATTATAGATTT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAAAATCTATAATTGACTaGTTCCTGTCCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTKSIID*FLSPGL
Trigger: GAGTCCTGGGGACAGGAAGCAGTCAATTATAGATTT...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGTTTCCTTTCAAACTaGTCTGTCCCAGTGATAGAC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSFLSN*SVPVID
Trigger: GTCTATCACTGGGACAGAGCAGTTTGAAAGGAAACT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGATTCTCTGCTCCATTTaGTCCTTTCTCAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGILCSI*SFLNLF
Trigger: AAAGAGGTTGAGAAAGGAGCAAATGGAGCAGAGAAT...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACATTAATGCCTCGGCCTTaGCTTATGTCTTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTLMPRP*LMSSCS
Trigger: ACTACAAGAAGACATAAGGCAAGGCCGAGGCATTAA...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCAGCTAACTGCTCTACGTaGCCCGCCGCCTGGACCCTA +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSAANCST*PAAWTL
Trigger: TAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGC...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CAAAGTAATTCGTGGAAGGGATTCCCTCATCACAGGTTACATAATTTCACCCACCCTTCTCAAGCCCTCTaGACGGTACCTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QSNSWKGFPHHRLHNFTHPSQAL*TVPVPR
Trigger: CCTGGGGACAGGTACCGTGCAGAGGGCTTGAGAAGG...GTGGGTGAAATTATGTAACCTGTGATGAGGGAATCCCTTCCACGAATTACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAGAGAAGTTGGGTGCGTaGTTGCCGTCTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSEKLGA*LPSCCW
Trigger: CCAGCAGCAAGACGGCAACCACGCACCCAACTTCTC...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCAGGCATGAGCCGTGGCTaGAGAAGTTGGGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPGMSRG*RSWVRG
Trigger: ACCACGCACCCAACTTCTCCAGCCACGGCTCATGCC...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATCGGCGGCATGAGCCGTaGCTGGAGAAGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYRRHEP*LEKLGA
Trigger: CGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCG...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CAAAGTAATTCGTGGAAGGGATTCCCTCATCACAGGTTACATAATTTCACCCACTTTCCCGCTGCAGCATaGGCGGTACTACCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QSNSWKGFPHHRLHNFTHFPAAA*AVLPGL
Trigger: GAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAA...GTGGGTGAAATTATGTAACCTGTGATGAGGGAATCCCTTCCACGAATTACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCATTTCCCGCTGCAGCATaGGCGGTACTACCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPFPAAA*AVLPGL
Trigger: GAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAA...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTTTTCTTTCTGATGTaGTCCATCAGGACGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPFFFLM*SIRTLL
Trigger: GAGAAGCGTCCTGATGGACCACATCAGAAAGAAAAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCATCACTCGGTTCCTTaGATATATCTTCTAAGCGCA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPHHSVP*IYLLSA
Trigger: TGCGCTTAGAAGATATATCCAAGGAACCGAGTGATG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTCCTGGTAGAATGGTaGCCAGAATTGCCAGAATTT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPFLVEW*PELPEF
Trigger: AAATTCTGGCAATTCTGGCCACCATTCTACCAGGAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GCAAGTTCTTTTAAGTATGAACTAGCGTGCACGCTGGACTACAAAGTAATTCGTGAGGATGGCGGGAACTaGAAGAGCGGCGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASSFKYELACTLDYKVIREDGGN*KSGGLQ
Trigger: CTGCAGACCGCCGCTCTTCCAGTTCCCGCCATCCTC...ACGAATTACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTTAAAAGAACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR TCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAATAAATTTTTCTTTCTaGTGTGGTCCATCAGGACGC +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTINFSF*CGPSGR
Trigger: GCGTCCTGATGGACCACATCAGAAAGAAAAATTTAT...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTATAAATTTTTCTTTCTaGTGTGGTCCATCAGGACGC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPINFSF*CGPSGR
Trigger: GCGTCCTGATGGACCACATCAGAAAGAAAAATTTAT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTGCAGGAGTCTGATTaGAGTTCAAAGCCATTATTT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLQESD*SSKPLF
Trigger: AAATAATGGCTTTGAACTTCAATCAGACTCCTGCAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR TCA 90 bp CCAACCACAGGAGGTTGTGGGGATGACTGGAGAGTTCATTTATGCCCAGACAGACCTCTTAAGGGGATCTaGCAACATGCCAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: PTTGGCGDDWRVHLCPDRPLKGI*QHAKLL
Trigger: CAAAAGTTTGGCATGTTGTCAGATCCCCTTAAGAGG...TCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR TCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTCCCAAATGCAAATACTaGCTGGACTATGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTPKCKY*LDYDLE
Trigger: CTCCAGGTCATAGTCCAGTCAGTATTTGCATTTGGG...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTGGTGGATTAACTGGCTaGCAGGACTGCCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTGGLTG*QDCPGK
Trigger: TTTTCCTGGGCAGTCCTGTCAGCCAGTTAATCCACC...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAGTCTGCATTGGTTTTaGCTCGATCTCTATCATTCT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSLHWF*LDLYHS
Trigger: AGAATGATAGAGATCGAGGCAAAACCAATGCAGACT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGCTTTCTTCCGGGTGGTaGCTGGACAGGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQLSSGW*LDRLLL
Trigger: CAGGAGCAGCCTGTCCAGGCACCACCCGGAAGAAAG...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTAGTTCTCGTTCTCTaGAGTAAGAAGCTAGTGACA +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLVLVL*SKKLVT
Trigger: TGTCACTAGCTTCTTACTGCAGAGAACGAGAACTAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTATTCTCTGCTCCATTTaGTCCTTTCTCAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPILCSI*SFLNLF
Trigger: AAAGAGGTTGAGAAAGGAGCAAATGGAGCAGAGAAT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTCTTTTCAGTGCACTaGTACCTGCATTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPFFSVH*YLHWNF
Trigger: GAAATTCCAATGCAGGTAGCAGTGCACTGAAAAGAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATTTGCCGTCTTGCTGCTaGGACTCCGGGAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYLPSCC*DSGRLS
Trigger: CGACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAA...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GCAAGTTCTTTTAAGTATGAACTAGCGTGCACGCTGGACTACAAAGTAATTCGTGGCATGAGCCGTGGCTaGAGAAGTTGGGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: ASSFKYELACTLDYKVIRGMSRG*RSWVRG
Trigger: ACCACGCACCCAACTTCTCCAGCCACGGCTCATGCC...ACGAATTACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTTAAAAGAACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTTTGGCTAAATATTTaGAGGCTAGTGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLWLNI*RLVTDK
Trigger: CTTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTTTGGAGTCTGCATTaGTTTTGCCTCGATCTCTAT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPFWSLH*FCLDLY
Trigger: ATAGAGATCGAGGCAAAACCAATGCAGACTCCAAAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTCTTCCGGGTGGTGCCTaGACAGGCTGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCLPGGA*TGCSCC
Trigger: GCAGCAGGAGCAGCCTGTCCAGGCACCACCCGGAAG...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTTGGAAGAAAAACCATaGGCTACTTGTGCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGLEEKP*ATCAKR
Trigger: TCTTTTAGCACAAGTAGCCCATGGTTTTTCTTCCAA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TGTCTCAGTTGCCTTCCACGTGATGTCCAATTAGGGACCAGCTGTACCAACCACGCCACACATTATTACTaGCCAGTCCCCACCAATTAT +
Preference number: 4 (lower is better)
Translates to: CLSCLPRDVQLGTSCTNHATHYY*PVPTNY
Trigger: ATAATTGGTGGGGACTGGCCAGTAATAATGTGTGGC...GTGGTTGGTACAGCTGGTCCCTAATTGGACATCACGTGGAAGGCAACTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR TCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCAGACAAGGCCGACGTaGCTCATGTATACCATGATC +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVQTRPT*LMYTMI
Trigger: GATCATGGTATACATGAGTCACGTCGGCCTTGTCTG...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTTTCTGGAGCTGTTATTaGAGATGTCAGCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTFWSCY*RCQLLP
Trigger: TGGCAGAAGCTGACATCTTCAATAACAGCTCCAGAA...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTCCTCTTAAGGGGATCTaGCAACATGCCAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTPLKGI*QHAKLL
Trigger: CAAAAGTTTGGCATGTTGTCAGATCCCCTTAAGAGG...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGGCTGGAGAAGTTGGGTaGGTGGTTGCCGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQAGEVG*VVAVLL
Trigger: CAGCAAGACGGCAACCACGCACCCAACTTCTCCAGC...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAAAGGAAGGACTCTCTTaGTTTTGGTATCATAGATTC +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTKEGLS*FWYHRF
Trigger: GAATCTATGATACCAAAAGCAAGAGAGTCCTTCCTT...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAAGGAAGGACTCTCTTaGTTTTGGTATCATAGATTC +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPKEGLS*FWYHRF
Trigger: GAATCTATGATACCAAAAGCAAGAGAGTCCTTCCTT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGTGGATTCTGTAGAATaGCCAGAACATTCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPVDSVE*PEHSLD
Trigger: ATCTAAAGAATGTTCTGGGCATTCTACAGAATCCAC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR GCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAATATCACATTTAACATaGTTTTCCAAAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTISHLT*FSKAPQ
Trigger: CTGTGGGGCTTTGGAAAAGCATGTTAAATGTGATAT...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTATAAAATCTCTGACTaGCAATGCTTGATTGACATG +
Preference number: 4 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGYKISD*QCLIDM
Trigger: CATGTCAATCAAGCATTGGCAGTCAGAGATTTTATA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCAACAGAGTCCAAAATaGACGCTAATTTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPQQSPK*TLISHD
Trigger: ATCATGAGAAATTAGCGTGCATTTTGGACTCTGTTG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCACGTGGCTGGAGAAGTTaGGTGCGTGGTTGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSARGWRS*VRGCRL
Trigger: AAGACGGCAACCACGCACCCAACTTCTCCAGCCACG...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GCAAGTTCTTTTAAGTATGAACTAGCGTGCACGCTGGACTACAAAGTAATTCGTCGTGGCTGGAGAAGTTaGGTGCGTGGTTGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: ASSFKYELACTLDYKVIRRGWRS*VRGCRL
Trigger: AAGACGGCAACCACGCACCCAACTTCTCCAGCCACG...ACGAATTACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTTAAAAGAACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGGACTCTCTTGCTTTTaGTATCATAGATTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPGLSCF*YHRFSC
Trigger: ACAAGAGAATCTATGATACCAAAAGCAAGAGAGTCC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGGTGCTGCAGGGCTTaGGATACATGGCACAACTTC +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSRCCRA*DTWHNF
Trigger: GAAGTTGTGCCATGTATCCCAAGCCCTGCAGCACCT...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCCCAAAGTGGCCTGACAAAAATTAAACCCAACTaGAACTTGGTCTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HTTTQCKLRLPSPQSGLTKIKPN*NLVLLS
Trigger: GGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTT...TGTCAGGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTGACTGGACTATGACCTaGAGTCTGAAGACCTCTACC +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTDWTMT*SLKTST
Trigger: GGTAGAGGTCTTCAGACTCCAGGTCATAGTCCAGTC...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAACGTGCCCCGCCGCCTaGACCCTACTGTTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLTCPAA*TLLLPP
Trigger: AGGAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGT...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCAAGCTGGTGGATTAACTaGCTGACAGGACTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPSWWIN*LTGLPR
Trigger: CCTGGGCAGTCCTGTCAGCCAGTTAATCCACCAGCT...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCAGAATTGCCAGAATTTaGAGGTGCCAAGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVRIARI*RCQACR
Trigger: TCTGCAGGCTTGGCACCTTCAAATTCTGGCAATTCT...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTTGCTACATCAGACAATaGTGGGATCCATGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTCYIRQ*WDPWPN
Trigger: GTTTGGCCATGGATCCCATCATTGTCTGATGTAGCA...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCAACCACAGGAGGTTGTGGGGATGACTGGAGAGTTCATTTATGCCCAGACAGAGGCAGGTTAGACATATaGCTATTATTCTGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: PTTGGCGDDWRVHLCPDRGRLDI*LLFCFY
Trigger: GTAGAAGCAGAATAATAGTCATATGTCTAACCTGCC...TCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR TCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTAAACTTTTGTTGGTCTaGCTCTTGGAGCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTKLLLV*LLEPQS
Trigger: TGATTGAGGCTCCAAGAGTCAGACCAACAAAAGTTT...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTTACAAGGGCCTAAACTaGGGTCTGGCCATTTATTTT +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTYKGLN*GLAIYF
Trigger: AAAATAAATGGCCAGACCTCAGTTTAGGCCCTTGTA...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCGCCGACACTGTTCATaGGTAAGGAATAACCATGGA +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVRRHCS*VRNNHG
Trigger: TCCATGGTTATTCCTTACTCATGAACAGTGTCGGCG...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCAACCACAGGAGGTTGTGGGGATGACTGGAGAGTTCATTTATGCCCAGACAGAATGTCTTCTTGTAGTTaGTTCTGCAGTTCATCTAGC +
Preference number: 4 (lower is better)
Translates to: PTTGGCGDDWRVHLCPDRMSSCS*FCSSSS
Trigger: GCTAGATGAACTGCAGAAGCAACTACAAGAAGACAT...TCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR GCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATATGGATCATGCTAACTaGTCTACGTGCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYMDHAN*STCPAA
Trigger: GGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCAT...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTAGGGCTCTTTTCTGGTaGCACCCTTTTGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTRALFW*HPFGFR
Trigger: TCTAAACCCAAAAGGGTGCCACCAGAAAAGAGCCCT...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGGAAGCTAGTGACAACTaGAATTTAGCTCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIREASDN*NLAPSG
Trigger: CCCACTGGGAGCTAAATTCCAGTTGTCACTAGCTTC...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCGGTTGTGGGGATGACTaGAGAGTTCATTTATGCCCA +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVGCGDD*RVHLCP
Trigger: TGGGCATAAATGAACTCTCCAGTCATCCCCACAACC...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCTTCCTAAGAGCTGGTaGATTAACTGGCTGACAGGA +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVLPKSW*INWLTG
Trigger: TCCTGTCAGCCAGTTAATCCACCAGCTCTTAGGAAG...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTACAGTCTGTATGAACTaGCATCATCCGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTTVCMN*HHPKQP
Trigger: TGGCTGTTTCGGATGATGTCAGTTCATACAGACTGT...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGGAGGTTGTGGGGATaGCTGGAGAGTTCATTTATG +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSRRLWG*LESSFM
Trigger: CATAAATGAACTCTCCAGTCATCCCCACAACCTCCT...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCAGTCCCCAAAGTGGCCTaGCATTCTCTGTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPVPKVA*HSLCNE
Trigger: TTCATTGCACAGAGAATGTCAGGCCACTTTGGGGAC...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGGGTGGATTAACTGGCTaGCAGGACTGCCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQGGLTG*QDCPGK
Trigger: TTTTCCTGGGCAGTCCTGTCAGCCAGTTAATCCACC...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTAGTTGGGTGCGTGGTTaGCGTCTTGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCSWVRG*RLAAGT
Trigger: AGTCCCAGCAGCAAGACGGCAACCACGCACCCAACT...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCGAAGATGTCAGCTTCTaGCACTGTGGTCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVEDVSF*HCGLLF
Trigger: AAAAAGCAGACCACAGTGGCAGAAGCTGACATCTTC...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCTCGGAGTTGATTCTCTaGTCCATTTGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVSELIL*SICSFL
Trigger: GAGAAAGGAGCAAATGGAGCAGAGAATCAACTCCGA...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTTCTTGTAGTTGCTTCTaGAGTTCATCTAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTSCSCF*SSSSLC
Trigger: ACAAAGGCTAGATGAACTGCAGAAGCAACTACAAGA...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGAGTGCAAGCTTCGTTTaGCAAGTCCCCAAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQSASFV*QVPKVA
Trigger: GGCCACTTTGGGGACTTGGCAAACGAAGCTTGCACT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCACACACCACCACTCAGTaGAAGCTTCGTTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPHTTTQ*KLRLPS
Trigger: ACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCACCTGGACCCTACTGTTaGCTCCTTAGCGACAAACCA +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSAPGPYC*LLSDKP
Trigger: TGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGG...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCAATAGGGCTCTTTTCTaGTGGCACCCTTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVNRALF*WHPFGF
Trigger: AAACCCAAAAGGGTGCCACCAGAAAAGAGCCCTATT...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGCTGTGGTCTGCTTTTTaGAGTCTGCATTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRLWSAF*SLHWFC
Trigger: GCAAAACCAATGCAGACTCCAAAAAGCAGACCACAG...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCAACCACAGGAGGTTGTGGGGATGACTGGAGAGTTCATTTATGCCCAGACAGAGGACTCTCTTGCTTTTaGTATCATAGATTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTTGGCGDDWRVHLCPDRGLSCF*YHRFSC
Trigger: ACAAGAGAATCTATGATACCAAAAGCAAGAGAGTCC...TCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGTTCTCCAATTCTGATTaGGGATTTAATGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRFSNSD*GFNASA
Trigger: GGCCGAGGCATTAAATCCCCAATCAGAATTGGAGAA...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTGTTTGTTACTACCCCTaGGCTAAAAACAACGTGTGC +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTVCYYP*AKNNVC
Trigger: GCACACGTTGTTTTTAGCCCAGGGGTAGTAACAAAC...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCAGCCAAGTCCCCAAAGTaGCCTGACATTCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSAAKSPK*PDILCA
Trigger: TGCACAGAGAATGTCAGGCCACTTTGGGGACTTGGC...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACAGCTGGTGGATTAACTaGCTGACAGGACTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYSWWIN*LTGLPR
Trigger: CCTGGGCAGTCCTGTCAGCCAGTTAATCCACCAGCT...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAACAGTCTGTATGAACTaGCATCATCCGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSTVCMN*HHPKQP
Trigger: TGGCTGTTTCGGATGATGTCAGTTCATACAGACTGT...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGAACTTTCTTTCCCCCTTaGTGTTGTCTGTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGTFFPP*CCLCFR
Trigger: TCTGAAACACAGACAACATCAAGGGGGAAAGAAAGT...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTACTTTCTTTCCCCCTTaGTGTTGTCTGTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTTFFPP*CCLCFR
Trigger: TCTGAAACACAGACAACATCAAGGGGGAAAGAAAGT...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTAGGAGGTTGTGGGGATaGCTGGAGAGTTCATTTATG +
Preference number: 4 (lower is better)
Translates to: GLTLGASISLGSWKLDLLRRLWG*LESSFM
Trigger: CATAAATGAACTCTCCAGTCATCCCCACAACCTCCT...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTAAACCTTCCAAAAGGTaGCAAAGGCACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLTLGASISLGSWKLDLLKPSKR*QRHHCH
Trigger: ATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTT...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp AAGTATGAACTAGCGTGCACGCTGGACTACAAAGTAATTCGTGGAAGGGATTCCGAGGATGTCATTAGATaGAACTCCCCATCTCATTAC +
Preference number: 4 (lower is better)
Translates to: KYELACTLDYKVIRGRDSEDVIR*NSPSHY
Trigger: GTAATGAGATGGGGAGTTTCATCTAATGACATCCTC...GGAATCCCTTCCACGAATTACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR GCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCAGTTTCCTTTCAAACTaGTCTGTCCCAGTGATAGAC +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVSFLSN*SVPVID
Trigger: GTCTATCACTGGGACAGAGCAGTTTGAAAGGAAACT...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTATATCACATTTAACATaGTTTTCCAAAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: PQLETLEHSGEQVTQANTISHLT*FSKAPQ
Trigger: CTGTGGGGCTTTGGAAAAGCATGTTAAATGTGATAT...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTATCTCTGACTGCCAATaGTTGATTGACATGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTISDCQ*LIDMSS
Trigger: TGAGCTCATGTCAATCAAGCATTGGCAGTCAGAGAT...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTCACACCACCACTCAGTaGAAGCTTCGTTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIHTTTQ*KLRLPS
Trigger: ACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTG...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAATGGATCATGCTAACTaGTCTACGTGCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLMDHAN*STCPAA
Trigger: GGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCAT...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGGCACAGATAATGAGGTaGGCCGACACTGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQAQIMR*ADTVHE
Trigger: CTCATGAACAGTGTCGGCGCACCTCATTATCTGTGC...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCTTCTGGATGTATAGATGTACACAAGCCTAGAAACTTAACCACATTTAAAATGCGTGGCTGGAGAAGTTaGGTGCGTGGTTGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: PSGCIDVHKPRNLTTFKMRGWRS*VRGCRL
Trigger: AAGACGGCAACCACGCACCCAACTTCTCCAGCCACG...CATTTTAAATGTGGTTAAGTTTCTAGGCTTGTGTACATCTATACATCCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTGAAGCTAGTGACAACTaGAATTTAGCTCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GLTLGASISLGSWKLDLLEASDN*NLAPSG
Trigger: CCCACTGGGAGCTAAATTCCAGTTGTCACTAGCTTC...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGTTTTTCTTTCTGATGTaGTCCATCAGGACGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRFFFLM*SIRTLL
Trigger: GAGAAGCGTCCTGATGGACCACATCAGAAAGAAAAA...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGACATCACTCGGTTCCTTaGATATATCTTCTAAGCGCA +
Preference number: 4 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGHHSVP*IYLLSA
Trigger: TGCGCTTAGAAGATATATCCAAGGAACCGAGTGATG...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCATCACTCGGTTCCTTaGATATATCTTCTAAGCGCA +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTHHSVP*IYLLSA
Trigger: TGCGCTTAGAAGATATATCCAAGGAACCGAGTGATG...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCAAGGGCTTGGGATACATaGCACAACTTCCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSARAWDT*HNFQSS
Trigger: GCTGCTTTGGAAGTTGTGCCATGTATCCCAAGCCCT...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTAGGGCTTGGGATACATaGCACAACTTCCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIRAWDT*HNFQSS
Trigger: GCTGCTTTGGAAGTTGTGCCATGTATCCCAAGCCCT...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCACACTGCTACCTGCATTaGAATTTCCTGAACTCTCTC +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSHCYLH*NFLNSL
Trigger: GAGAGAGTTCAGGAAATTCCAATGCAGGTAGCAGTG...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAGTTTGTTACTACCCCTaGGCTAAAAACAACGTGTGC +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSVCYYP*AKNNVC
Trigger: GCACACGTTGTTTTTAGCCCAGGGGTAGTAACAAAC...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACGAAAGCCCCCATCGTTaGGCAGATAGATGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYESPHR*ADRCQS
Trigger: ACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTC...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGGACTGGACTATGACCTaGAGTCTGAAGACCTCTACC +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQDWTMT*SLKTST
Trigger: GGTAGAGGTCTTCAGACTCCAGGTCATAGTCCAGTC...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACGCCAAGTCCCCAAAGTaGCCTGACATTCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYAKSPK*PDILCA
Trigger: TGCACAGAGAATGTCAGGCCACTTTGGGGACTTGGC...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TGCAGTTCATCTAGCCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGCTTCATTTACAGATGTaGTCTCCAAAGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSSSLCVSSISFTRRSKLHLQM*SPKQGV
Trigger: CACCCCCTGCTTTGGAGACCACATCTGTAAATGAAG...CTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGCTAGATGAACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR TCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGCTGCAGGAGTCTGATTaGAGTTCAAAGCCATTATTT +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRLQESD*SSKPLF
Trigger: AAATAATGGCTTTGAACTTCAATCAGACTCCTGCAG...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGAACAATACAGTCTGTATaGACTGACATCATCCGAAAC +
Preference number: 4 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGTIQSV*TDIIRN
Trigger: GTTTCGGATGATGTCAGTTCATACAGACTGTATTGT...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGCCATGGCCAAACTGGTaGGTCACTGAAGGTATCATT +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQPWPNW*VTEGII
Trigger: AATGATACCTTCAGTGACTCACCAGTTTGGCCATGG...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCACAGCAGCTGTGGTTTTaGAGTGCAACAACTTCAAGA +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPQQLWF*SATTSR
Trigger: TCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTG...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATGTTCTCTTTCCCGCTaGAGCATGGGCGGTACTACC +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLCSLSR*SMGGTT
Trigger: GGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGATTCTTTTCAGTGCACTaGTACCTGCATTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGFFSVH*YLHWNF
Trigger: GAAATTCCAATGCAGGTAGCAGTGCACTGAAAAGAA...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TGCAGTTCATCTAGCCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGAGGCTTTCCTGTAGCTaGAGGAGTCTGATTGAAGTT +
Preference number: 4 (lower is better)
Translates to: CSSSSLCVSSISFTRRSKRLSCS*RSLIEV
Trigger: AACTTCAATCAGACTCCTGCAGCTACAGGAAAGCCT...CTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGCTAGATGAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR GCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGATGTCTTCTTGTAGTTaGTTCTGCAGTTCATCTAGC +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRMSSCS*FCSSSS
Trigger: GCTAGATGAACTGCAGAAGCAACTACAAGAAGACAT...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTGGGGATCTGACAACATaGCAAACTTTTGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTGDLTT*QTFVSQ
Trigger: TTGAGAAACAAAAGTTTGGCATGTTGTCAGATCCCC...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAGCTAAAAACAACGTGTaGACTTCCACTAACCCTCTA +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSAKNNV*TSTNPL
Trigger: TAGAGGGTTAGTGGAAGTGCACACGTTGTTTTTAGC...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTCGTTGGGCAGATAGATaGCAGAGTTTCAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIRWADR*QSFKLL
Trigger: CAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACG...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGAGGTGATCCATTGGGGTaGAGGAAGAAAATAATAGAA +
Preference number: 4 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGGDPLG*RKKIIE
Trigger: TTCTATTATTTTCTTCCTGCACCCCAATGGATCACC...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTGTCTTCATTAAAGTCTaGCTGAAGATTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GLTLGASISLGSWKLDLLVFIKV*LKILQG
Trigger: CCCCTGGAGAATCTTCAGCCAGACTTTAATGAAGAC...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCTTGCCTTATGTCTTCTTGTAGTTGCTTCTGCAGTTCATCTAGCCTTTGTGTGGTAGGCCGACAGTTCTaGATTATTTCCTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: PCLMSSCSCFCSSSSLCVVGRQF*IISCHF
Trigger: AAAATGGCAGGAAATAATCCAGAACTGTCGGCCTAC...CACACAAAGGCTAGATGAACTGCAGAAGCAACTACAAGAAGACATAAGGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGACTCCTATTAAGAATCTaGTACCCAGAAGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGLLLRI*YPEVMK
Trigger: CTTCATGACTTCTGGGTACCAGATTCTTAATAGGAG...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp AGCCTCTTGGAGAGGCGTGAAGTTACTGAAAGAGAAAACACGTCACATTCCAAACTACAAAGTAATTCGTaGAAGGGATTCCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: SLLERREVTERENTSHSKLQSNS*KGFPHH
Trigger: GTGATGAGGGAATCCCTTCCACGAATTACTTTGTAG...TTTGGAATGTGACGTGTTTTCTCTTTCAGTAACTTCACGCCTCTCCAAGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR TCA 90 bp TGCAGTTCATCTAGCCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGAAGAATTCTCGGAGTTaGTTCTCTGCTCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: CSSSSLCVSSISFTRRSKKNSRS*FSAPFA
Trigger: AGCAAATGGAGCAGAGAATCAACTCCGAGAATTCTT...CTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGCTAGATGAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR TCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAGGCAGGTTAGACATATaGCTATTATTCTGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSGRLDI*LLFCFY
Trigger: GTAGAAGCAGAATAATAGTCATATGTCTAACCTGCC...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCACAGCAGCTGTGGTTTTaGAGTGCAACAACTTCAAGA +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSAQQLWF*SATTSR
Trigger: TCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTG...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCATACAAGGGCCTAAACTaGGGTCTGGCCATTTATTTT +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPYKGLN*GLAIYF
Trigger: AAAATAAATGGCCAGACCTCAGTTTAGGCCCTTGTA...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGGTCACAAAGTTTTCATaGGAACCCAAATGCAAATAC +
Preference number: 4 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRVTKFS*EPKCKY
Trigger: GTATTTGCATTTGGGTTCTCATGAAAACTTTGTGAC...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACCGCCGACACTGTTCATaGGTAAGGAATAACCATGGA +
Preference number: 4 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYRRHCS*VRNNHG
Trigger: TCCATGGTTATTCCTTACTCATGAACAGTGTCGGCG...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGTCTGCATTGGTTTTaGCTCGATCTCTATCATTCT +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSSLHWF*LDLYHS
Trigger: AGAATGATAGAGATCGAGGCAAAACCAATGCAGACT...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCACTGCTTTTTGGAGTCTaGATTGGTTTTGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSALLFGV*IGFASI
Trigger: GATCGAGGCAAAACCAATGCAGACTCCAAAAAGCAG...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCATTAGTTCTCGTTCTCTaGAGTAAGAAGCTAGTGACA +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSLVLVL*SKKLVT
Trigger: TGTCACTAGCTTCTTACTGCAGAGAACGAGAACTAA...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCAAGGAAGGACTCTCTTaGTTTTGGTATCATAGATTC +
Preference number: 4 (lower is better)
Translates to: TVILPNTPPLSASFVCQVKEGLS*FWYHRF
Trigger: GAATCTATGATACCAAAAGCAAGAGAGTCCTTCCTT...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGAATGGTGGCCAGAATTaGCAGAATTTGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQNGGQN*QNLKVP
Trigger: TGGCACCTTCAAATTCTGGCAATTCTGGCCACCATT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCATTTAGAAATTCCTTGTaGTCTTCTAAGAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSFRNSL*SSKRPS
Trigger: GGATGGCCTCTTAGAAGAGCACAAGGAATTTCTAAA...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCAACTGGAACTTGGTCTTaGTTTCCATGTCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPTGTWS*FPCPTS
Trigger: AGAAGTTGGACATGGAAAGCAAGACCAAGTTCCAGT...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACCGTTGGGCAGATAGATaGCAGAGTTTCAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYRWADR*QSFKLL
Trigger: CAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACG...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTACCTGGACCCTACTGTTaGCTCCTTAGCGACAAACCA +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLPGPYC*LLSDKP
Trigger: TGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGG...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATAGGGCTCTTTTCTGGTaGCACCCTTTTGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYRALFW*HPFGFR
Trigger: TCTAAACCCAAAAGGGTGCCACCAGAAAAGAGCCCT...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAGAATTTAGCTCCCAGTaGGCTTTCTTCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLEFSSQ*AFFRVV
Trigger: CACCACCCGGAAGAAAGCCCACTGGGAGCTAAATTC...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTTTTTTCTTTCTGATGTaGTCCATCAGGACGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLTLGASISLGSWKLDLLFFFLM*SIRTLL
Trigger: GAGAAGCGTCCTGATGGACCACATCAGAAAGAAAAA...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGCCTGCCACTTGGATTTaGTCACTATTCCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQPATWI*SLFLVE
Trigger: TTCTACCAGGAATAGTGACCAAATCCAAGTGGCAGG...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAAGGTGCTGCAGGGCTTaGGATACATGGCACAACTTC +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLRCCRA*DTWHNF
Trigger: GAAGTTGTGCCATGTATCCCAAGCCCTGCAGCACCT...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTGTCTTCATTAAAGTCTaGCTGAAGATTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIVFIKV*LKILQG
Trigger: CCCCTGGAGAATCTTCAGCCAGACTTTAATGAAGAC...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTGAGGGAGACAAAGCATaGGGACTCAAGGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCEGDKA*GLKGEV
Trigger: TACTTCTCCCTTGAGTCCCCATGCTTTGTCTCCCTC...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTTTACTTCCTAAGAGCTaGTGGATTAACTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: GLTLGASISLGSWKLDLLLLPKS*WINWLT
Trigger: TGTCAGCCAGTTAATCCACCAGCTCTTAGGAAGTAA...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCACTGCAGGAGTCTGATTaGAGTTCAAAGCCATTATTT +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPLQESD*SSKPLF
Trigger: AAATAATGGCTTTGAACTTCAATCAGACTCCTGCAG...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGAAACTTTTGTTGGTCTaGCTCTTGGAGCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQKLLLV*LLEPQS
Trigger: TGATTGAGGCTCCAAGAGTCAGACCAACAAAAGTTT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATAATGGTGGCCAGAATTaGCAGAATTTGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYNGGQN*QNLKVP
Trigger: TGGCACCTTCAAATTCTGGCAATTCTGGCCACCATT...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TGCAGTTCATCTAGCCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGTCTTGTAGTTGCTTCTaGAGTTCATCTAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: CSSSSLCVSSISFTRRSKSCSCF*SSSSLC
Trigger: ACAAAGGCTAGATGAACTGCAGAAGCAACTACAAGA...CTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGCTAGATGAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR GCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAGCACAGATAATGAGGTaGGCCGACACTGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLAQIMR*ADTVHE
Trigger: CTCATGAACAGTGTCGGCGCACCTCATTATCTGTGC...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CTGGACTACAAAGTAATTCGTGGAAGGGATTCCCTCATCACAGGTTACATAATTAAGTATGAACTAGCGTaGACGCTGGACTACAAAGTA +
Preference number: 4 (lower is better)
Translates to: LDYKVIRGRDSLITGYIIKYELA*TLDYKV
Trigger: TACTTTGTAGTCCAGCGTGCACGCTAGTTCATACTT...AATTATGTAACCTGTGATGAGGGAATCCCTTCCACGAATTACTTTGTAGTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CCA 90 bp TGCAGTTCATCTAGCCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGTTTTGGAGTCTGCATTaGTTTTGCCTCGATCTCTAT +
Preference number: 4 (lower is better)
Translates to: CSSSSLCVSSISFTRRSKFWSLH*FCLDLY
Trigger: ATAGAGATCGAGGCAAAACCAATGCAGACTCCAAAA...CTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGCTAGATGAACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGAATCAATAATGCCATCTaGTTGTTCAGCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGINNAI*LFSLFL
Trigger: AAGAAAAAGGCTGAACAACCAGATGGCATTATTGAT...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCAATGAAGGAAAATGCATaGATTGAAACCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSAMKENA*IETSLW
Trigger: CCACAGGGAGGTTTCAATCCATGCATTTTCCTTCAT...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTTACTTCCTAAGAGCTaGTGGATTAACTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: PLTLYHLNQRMALQCLRILLPKS*WINWLT
Trigger: TGTCAGCCAGTTAATCCACCAGCTCTTAGGAAGTAA...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTGACTCATGTATACCATaGTCTTCATGGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIDSCIP*SSWCSL
Trigger: TAAAGAGCACCATGAAGATCATGGTATACATGAGTC...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTCTGCTTTTTGGAGTCTaGATTGGTTTTGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCLLFGV*IGFASI
Trigger: GATCGAGGCAAAACCAATGCAGACTCCAAAAAGCAG...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGAGTCTCCTTGGTACCTaGCACTTGGATTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: FPSMYLKSALTQYSLYELSLLGT*HLDLVT
Trigger: AGTGACCAAATCCAAGTGGCAGGTACCAAGGAGACT...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR GCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTTCTTTTCAGTGCACTaGTACCTGCATTGGAATTTC +
Preference number: 4 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIFFSVH*YLHWNF
Trigger: GAAATTCCAATGCAGGTAGCAGTGCACTGAAAAGAA...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATTGTAGGACTGATACCTaGAGATTACTGGCATTAGGA +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYCRTDT*RLLALG
Trigger: TCCTAATGCCAGTAATCTGCAGGTATCAGTCCTACA...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCATTCAAGTGGCACATTTaGTGTACATTTTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPFKWHI*CTFSWH
Trigger: ATGCCAAGAAAATGTACAGCAAATGTGCCACTTGAA...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGGGGGATCTGACAACATaGCAAACTTTTGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQGDLTT*QTFVSQ
Trigger: TTGAGAAACAAAAGTTTGGCATGTTGTCAGATCCCC...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATGCTAAAAACAACGTGTaGACTTCCACTAACCCTCTA +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYAKNNV*TSTNPL
Trigger: TAGAGGGTTAGTGGAAGTGCACACGTTGTTTTTAGC...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCAGGACTCTCTTGCTTTTaGTATCATAGATTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPGLSCF*YHRFSC
Trigger: ACAAGAGAATCTATGATACCAAAAGCAAGAGAGTCC...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATTTCCTGGTAGAATGGTaGCCAGAATTGCCAGAATTT +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYFLVEW*PELPEF
Trigger: AAATTCTGGCAATTCTGGCCACCATTCTACCAGGAA...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGGGTTGTGGGGATGACTaGAGAGTTCATTTATGCCCA +
Preference number: 4 (lower is better)
Translates to: FPSMYLKSALTQYSLYELGCGDD*RVHLCP
Trigger: TGGGCATAAATGAACTCTCCAGTCATCCCCACAACC...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCATGCTGTACATTTTCTTaGCATTCATTGGATTCTGTA +
Preference number: 4 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSCCTFS*HSLDSV
Trigger: TACAGAATCCAATGAATGCCAAGAAAATGTACAGCA...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTAAAATTAAACCCAACTaGAACTTGGTCTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GLTLGASISLGSWKLDLLKIKPN*NLVLLS
Trigger: GGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTT...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CAA 72 bp GAGGAGATTTTTGTGAAGCTGAAAGCAAGCTACTATTaGCGCTTGAAAGCAGAAACAAAATGCAAACCTTCC +
Preference number: 4 (lower is better)
Translates to: EEIFVKLKASYY*RLKAETKCKPS
Trigger: GGAAGGTTTGCATTTTGTTTCTGCTTTCAAGCGCAAATAGTAGCTTGCTTTCAGCTTCACAAAAATCTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTAAATCTATAATTGACTaGTTCCTGTCCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCKSIID*FLSPGL
Trigger: GAGTCCTGGGGACAGGAAGCAGTCAATTATAGATTT...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATAGTCTGCATTGGTTTTaGCTCGATCTCTATCATTCT +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYSLHWF*LDLYHS
Trigger: AGAATGATAGAGATCGAGGCAAAACCAATGCAGACT...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGGAAGATGTCAGCTTCTaGCACTGTGGTCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FPSMYLKSALTQYSLYELEDVSF*HCGLLF
Trigger: AAAAAGCAGACCACAGTGGCAGAAGCTGACATCTTC...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR GCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATCGGAGTTGATTCTCTaGTCCATTTGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLSELIL*SICSFL
Trigger: GAGAAAGGAGCAAATGGAGCAGAGAATCAACTCCGA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCAGTGGATTCTGTAGAATaGCCAGAACATTCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSAVDSVE*PEHSLD
Trigger: ATCTAAAGAATGTTCTGGGCATTCTACAGAATCCAC...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTTTAATGCCTCGGCCTTaGCTTATGTCTTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCLMPRP*LMSSCS
Trigger: ACTACAAGAAGACATAAGGCAAGGCCGAGGCATTAA...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGAATAGGGCTCTTTTCTaGTGGCACCCTTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: FPSMYLKSALTQYSLYELNRALF*WHPFGF
Trigger: AAACCCAAAAGGGTGCCACCAGAAAAGAGCCCTATT...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACCTTTGGCTAAATATTTaGAGGCTAGTGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYLWLNI*RLVTDK
Trigger: CTTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAG...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATTTTTGGAGTCTGCATTaGTTTTGCCTCGATCTCTAT +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYFWSLH*FCLDLY
Trigger: ATAGAGATCGAGGCAAAACCAATGCAGACTCCAAAA...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCTTCTGGATGTATAGATGTACACAAGCCTAGAAACTTAACCACATTTAAAATGCTGTGGTCTGCTTTTTaGAGTCTGCATTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PSGCIDVHKPRNLTTFKMLWSAF*SLHWFC
Trigger: GCAAAACCAATGCAGACTCCAAAAAGCAGACCACAG...CATTTTAAATGTGGTTAAGTTTCTAGGCTTGTGTACATCTATACATCCAGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTATCCTGGTAACCTTCTaGATGTATAGATGTACACAA +
Preference number: 4 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIILVTF*MYRCTQ
Trigger: TTGTGTACATCTATACATCCAGAAGGTTACCAGGAT...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTGTAGGCCGACAGTTCTaGATTATTTCCTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCVGRQF*IISCHF
Trigger: AAAATGGCAGGAAATAATCCAGAACTGTCGGCCTAC...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTTTAGTTCTCGTTCTCTaGAGTAAGAAGCTAGTGACA +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCLVLVL*SKKLVT
Trigger: TGTCACTAGCTTCTTACTGCAGAGAACGAGAACTAA...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTATTCTCTGCTCCATTTaGTCCTTTCTCAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCILCSI*SFLNLF
Trigger: AAAGAGGTTGAGAAAGGAGCAAATGGAGCAGAGAAT...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGTTACGGCTACATCAATaGATTTTGTGCATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: FPSMYLKSALTQYSLYELLRLHQ*ILCMES
Trigger: GCTCTCCATGCACAAAATGCATTGATGTAGCCGTAA...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATTCCTGGTAGAATGGTaGCCAGAATTGCCAGAATTT +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLFLVEW*PELPEF
Trigger: AAATTCTGGCAATTCTGGCCACCATTCTACCAGGAA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGATCAATAATGCCATCTaGTTGTTCAGCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQINNAI*LFSLFL
Trigger: AAGAAAAAGGCTGAACAACCAGATGGCATTATTGAT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTCTCCTATTAAGAATCTaGTACCCAGAAGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCLLLRI*YPEVMK
Trigger: CTTCATGACTTCTGGGTACCAGATTCTTAATAGGAG...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
3UTR CAA 72 bp CTTAGTCTTCCCTATAAAATCTCTGACTGCCAATGCTaGATTGACATGAGCTCAAAAGTTACTGATGCTATT +
Preference number: 4 (lower is better)
Translates to: LSLPYKISDCQC*IDMSSKVTDAI
Trigger: AATAGCATCAGTAACTTTTGAGCTCATGTCAATCAAGCATTGGCAGTCAGAGATTTTATAGGGAAGACTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTAGAACAAACAGCATATaGATGTTCTGGCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCRTNSI*MFWHQN
Trigger: GTTTTGATGCCAGAACATTCATATGCTGTTTGTTCT...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR GCA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATTATAAAATCTCTGACTaGCAATGCTTGATTGACATG +
Preference number: 4 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYYKISD*QCLIDM
Trigger: CATGTCAATCAAGCATTGGCAGTCAGAGATTTTATA...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTACTTTGGCTAAATATTTaGAGGCTAGTGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLLWLNI*RLVTDK
Trigger: CTTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAG...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTGCTGTACATTTTCTTaGCATTCATTGGATTCTGTA +
Preference number: 4 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYCCTFS*HSLDSV
Trigger: TACAGAATCCAATGAATGCCAAGAAAATGTACAGCA...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR TCA 90 bp CCTTCTGGATGTATAGATGTACACAAGCCTAGAAACTTAACCACATTTAAAATGGTCACAAAGTTTTCATaGGAACCCAAATGCAAATAC +
Preference number: 4 (lower is better)
Translates to: PSGCIDVHKPRNLTTFKMVTKFS*EPKCKY
Trigger: GTATTTGCATTTGGGTTCTCATGAAAACTTTGTGAC...CATTTTAAATGTGGTTAAGTTTCTAGGCTTGTGTACATCTATACATCCAGAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR GCA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGGTGGATTCTGTAGAATaGCCAGAACATTCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: FPSMYLKSALTQYSLYELVDSVE*PEHSLD
Trigger: ATCTAAAGAATGTTCTGGGCATTCTACAGAATCCAC...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR GCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATTCAAGTGGCACATTTaGTGTACATTTTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLFKWHI*CTFSWH
Trigger: ATGCCAAGAAAATGTACAGCAAATGTGCCACTTGAA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATGGAAACAAGGTTGTTaGAAACTTGTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: DARVSSFCQIELFVSISLWKQGC*KLVQIF
Trigger: AAAGATCTGGACAAGTTTCCAACAACCTTGTTTCCA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CCA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGTGGAAACAAGGTTGTTaGAAACTTGTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: FPSMYLKSALTQYSLYELWKQGC*KLVQIF
Trigger: AAAGATCTGGACAAGTTTCCAACAACCTTGTTTCCA...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CCA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGTTGGAAGAAAAACCATaGGCTACTTGTGCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: FPSMYLKSALTQYSLYELLEEKP*ATCAKR
Trigger: TCTTTTAGCACAAGTAGCCCATGGTTTTTCTTCCAA...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649226.1
3UTR CAA 72 bp ATTACCAGCTTCATACTAGATATTCAAGTGGCACATTaGCTGTACATTTTCTTGGCATTCATTGGATTCTGT +
Preference number: 4 (lower is better)
Translates to: ITSFILDIQVAH*LYIFLAFIGFC
Trigger: ACAGAATCCAATGAATGCCAAGAAAATGTACAGCAAATGTGCCACTTGAATATCTAGTATGAAGCTGGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS CCA 90 bp GTCGGCGCCGCTGGCGACGGCGGCATGAGCCGTGGCTGGAGAAGTTaGGTGCGTGGTTGCCGTCTTGCTGCTGGGACTCCGGGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: VGAAGDGGMSRGWRS*VRGCRLAAGTPGGC
Trigger: ACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGCGGCGCCGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CCA 90 bp GAGCCGTGGCTGGAGAAGTTGGGTGCGTGGTTGCCGTCTTGCTGCTaGGACTCCGGGAGGCTGTCGGAGCAGAGGTGGGCGGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: EPWLEKLGAWLPSCC*DSGRLSEQRWAAPP
Trigger: AGGGGGTGCCGCCCACCTCTGCTCCGACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CCA 90 bp CGCTGGCGACGGCGGCATGAGCCGTGGCTGGAGAAGTTGGGTGCGTaGTTGCCGTCTTGCTGCTGGGACTCCGGGAGGCTGTCGGAGCAG +
Preference number: 5 (lower is better)
Translates to: RWRRRHEPWLEKLGA*LPSCCWDSGRLSEQ
Trigger: CTGCTCCGACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS TCA 90 bp GGCATGCAGCGCCTTGTCATGTCGGCGCCGCTGGCGACGGCGGCATaGGCCGTGGCTGGAGAAGTTGGGTGCGTGGTTGCCGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GMQRLVMSAPLATAA*AVAGEVGCVVAVLL
Trigger: CAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGCGGCGCCGACATGACAAGGCGCTGCATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CCA 90 bp CCTTGTCATGTCGGCGCCGCTGGCGACGGCGGCATGAGCCGTGGCTaGAGAAGTTGGGTGCGTGGTTGCCGTCTTGCTGCTGGGACTCCG +
Preference number: 5 (lower is better)
Translates to: PCHVGAAGDGGMSRG*RSWVRGCRLAAGTP
Trigger: CGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGCGGCGCCGACATGACAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CCA 90 bp AGCGCCTTGTCATGTCGGCGCCGCTGGCGACGGCGGCATGAGCCGTaGCTGGAGAAGTTGGGTGCGTGGTTGCCGTCTTGCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SALSCRRRWRRRHEP*LEKLGAWLPSCCWD
Trigger: GTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGCGGCGCCGACATGACAAGGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS-3UTR CAA 90 bp GCGGGGATTTGCCAGGCCCCGAAATGCCAACGCCTGAGCTCGCGGAGGATGGCGTGCGTGGTTGCCGTCTaGCTGCTGGGACTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: AGICQAPKCQRLSSRRMACVVAV*LLGLRE
Trigger: CTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCA...CGCCATCCTCCGCGAGCTCAGGCGTTGGCATTTCGGGGCCTGGCAAATCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS CCA 90 bp CGGTACCTGTCCCCAGGACTCTCTGTTCTCTTTCCCGCTGCAGCATaGGCGGTACTACCGGGTCTCAGATGGCAGCGCGGGGGCGACGAC +
Preference number: 5 (lower is better)
Translates to: RYLSPGLSVLFPAAA*AVLPGLRWQRGGDD
Trigger: GTCGTCGCCCCCGCGCTGCCATCTGAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACAGAGAGTCCTGGGGACAGGTACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CAA 90 bp GGCCCCGAAATGCCAACGCCTGAGCTCGCGGAGGATGGCGGGAACTGGAAGAGCCCGTGGCTGGAGAAGTaGGGTGCGTGGTTGCCGTCT +
Preference number: 5 (lower is better)
Translates to: GPEMPTPELAEDGGNWKSPWLEK*GAWLPS
Trigger: AGACGGCAACCACGCACCCAACTTCTCCAGCCACGG...GCTCTTCCAGTTCCCGCCATCCTCCGCGAGCTCAGGCGTTGGCATTTCGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS GCA 90 bp CTCTGCACGGTACCTGTCCCCAGGACTCTCTGTTCTCTTTCCCGCTaGAGCATGGGCGGTACTACCGGGTCTCAGATGGCAGCGCGGGGG +
Preference number: 5 (lower is better)
Translates to: LCTVPVPRTLCSLSR*SMGGTTGSQMAARG
Trigger: CCCCCGCGCTGCCATCTGAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACAGAGAGTCCTGGGGACAGGTACCGTGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS CCA 90 bp TGCTTCCTGTCCCCAGGACTCTCTGTTCTCTTTCCCGCTGCAGCATaGGCGGTACTACCGGGTCTCAGATGGCAGCGCGGGGGCGACGAC +
Preference number: 5 (lower is better)
Translates to: CFLSPGLSVLFPAAA*AVLPGLRWQRGGDD
Trigger: GTCGTCGCCCCCGCGCTGCCATCTGAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACAGAGAGTCCTGGGGACAGGAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS-3UTR CAA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCACCGTGGCTGGAGAAGTaGGGTGCGTGGTTGCCGTCT +
Preference number: 5 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSPWLEK*GAWLPS
Trigger: AGACGGCAACCACGCACCCAACTTCTCCAGCCACGG...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCGGGCATGCAGCGCCTaGTCATGTCGGCGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRACSA*SCRRRW
Trigger: CCAGCGGCGCCGACATGACAAGGCGCTGCATGCCCG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTGCGTGGTTGCCGTCTaGCTGCTGGGACTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGCVVAV*LLGLRE
Trigger: CTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTGCGTGGTTGCCGTCTaGCTGCTGGGACTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPCVVAV*LLGLRE
Trigger: CTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGAAGTTGGGTGCGTGGTaGCCGTCTTGCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGKLGAW*PSCCWD
Trigger: GTCCCAGCAGCAAGACGGCAACCACGCACCCAACTT...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCCGTGGCTGGAGAAGTaGGGTGCGTGGTTGCCGTCT +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPPWLEK*GAWLPS
Trigger: AGACGGCAACCACGCACCCAACTTCTCCAGCCACGG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAAAGGTGCTGCAGGGCTaGGGATACATGGCACAACTT +
Preference number: 5 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSKVLQG*GYMAQL
Trigger: AAGTTGTGCCATGTATCCCAAGCCCTGCAGCACCTT...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp AGCCTCTTGGAGAGGCGTGAAGTTACTGAAAGAGAAAACACGTCACATTCCAAACCTCCCCTCATACCCTaGCCCCCGCGACCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: SLLERREVTERENTSHSKPPLIP*PPRPGP
Trigger: GGGGCCGGGTCGCGGGGGCAAGGGTATGAGGGGAGG...TTTGGAATGTGACGTGTTTTCTCTTTCAGTAACTTCACGCCTCTCCAAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CAA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGCGGGCATGCAGCGCCTaGTCATGTCGGCGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRRACSA*SCRRRW
Trigger: CCAGCGGCGCCGACATGACAAGGCGCTGCATGCCCG...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCAACCTGCCACTTGGATTaGGTCACTATTCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSTCHLD*VTIPGR
Trigger: TCTACCAGGAATAGTGACCAAATCCAAGTGGCAGGT...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCGACTCACCGCAGCCTaGAACTCCTGGGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPRLTAA*NSWAQV
Trigger: TACTTGAGCCCAGGAGTTCAAGGCTGCGGTGAGTCG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCAGCTCACTACAGCCTaGACCTCCTTGGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPQLTTA*TSLGSG
Trigger: ACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCACCTGCCACTTGGATTaGGTCACTATTCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLTCHLD*VTIPGR
Trigger: TCTACCAGGAATAGTGACCAAATCCAAGTGGCAGGT...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCTCTGGTGGCACCCTTTaGGGTTTAGATTCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLSGGTL*GLDSFG
Trigger: ACCAAAAGAATCTAAACCCAAAAGGGTGCCACCAGA...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCGAGTCTGCATTGGTTTaGCCTCGATCTCTATCATTC +
Preference number: 5 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLESALV*PRSLSF
Trigger: GAATGATAGAGATCGAGGCAAAACCAATGCAGACTC...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCATTTTTGGAGTCTGCATaGGTTTTGCCTCGATCTCTA +
Preference number: 5 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSFLESA*VLPRSL
Trigger: TAGAGATCGAGGCAAAACCAATGCAGACTCCAAAAA...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAAGGTGCTGCAGGGCTaGGGATACATGGCACAACTT +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPKVLQG*GYMAQL
Trigger: AAGTTGTGCCATGTATCCCAAGCCCTGCAGCACCTT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCACTACATCAATGCATTTaGTGCATGGAGAGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSLHQCI*CMESLL
Trigger: TAAGAGGCTCTCCATGCACAAAATGCATTGATGTAG...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGCCGTGGCTGGAGAAGTaGGGTGCGTGGTTGCCGTCT +
Preference number: 5 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRPWLEK*GAWLPS
Trigger: AGACGGCAACCACGCACCCAACTTCTCCAGCCACGG...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGCGGGCATGCAGCGCCTaGTCATGTCGGCGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQRACSA*SCRRRW
Trigger: CCAGCGGCGCCGACATGACAAGGCGCTGCATGCCCG...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TCCAAATCTGCAAGTTCTTTTAAGTATGAACTAGCGTGCACGCTGGACTACAAACGGGCATGCAGCGCCTaGTCATGTCGGCGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SKSASSFKYELACTLDYKRACSA*SCRRRW
Trigger: CCAGCGGCGCCGACATGACAAGGCGCTGCATGCCCG...TTTGTAGTCCAGCGTGCACGCTAGTTCATACTTAAAAGAACTTGCAGATTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGAATGGTGGCCAGAATaGCCAGAATTTGAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPEWWPE*PEFEGA
Trigger: GGCACCTTCAAATTCTGGCAATTCTGGCCACCATTC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGAGAGGAACCAGCACTaGGAACACGGGAAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPERNQH*EHGKVK
Trigger: CTTTACTTTCCCGTGTTCCAAGTGCTGGTTCCTCTC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGAAACCCAACTGGAACTaGGTCTTGCTTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGKPNWN*VLLSMS
Trigger: GGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTT...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTTCTGGAGCTGTTATaGAAGATGTCAGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLLELL*KMSASA
Trigger: GGCAGAAGCTGACATCTTCAATAACAGCTCCAGAAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GCCCCGCCGCCTGGACCCTACTGTTGCCTCCTTAGCGACAAACCACCACAGTCATTAAGGAAAGACTGCTaGCTTCTGAGAAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: APPPGPYCCLLSDKPPQSLRKDC*LLRKNS
Trigger: AGAATTCTTTCTCAGAAGCAAGCAGTCTTTCCTTAA...TGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGGCGGCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTACCTGCCACTTGGATTaGGTCACTATTCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPTCHLD*VTIPGR
Trigger: TCTACCAGGAATAGTGACCAAATCCAAGTGGCAGGT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCTTGGTACCTGCCACTaGGATTTGGTCACTATTCCT +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLGTCH*DLVTIP
Trigger: AGGAATAGTGACCAAATCCAAGTGGCAGGTACCAAG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp TGGATCATGCTAACTGCTCTACGTGCCCCGCCGCCTGGACCCTACTGTTGCCTCTTTGCTTTGTGTTCCTaGTGTTTGGTGGATTCTGTA +
Preference number: 5 (lower is better)
Translates to: WIMLTALRAPPPGPYCCLFALCS*CLVDSV
Trigger: TACAGAATCCACCAAACACAAGGAACACAAAGCAAA...GAGGCAACAGTAGGGTCCAGGCGGCGGGGCACGTAGAGCAGTTAGCATGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGCACTGCTACCTGCATaGGAATTTCCTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPALLPA*EFPELS
Trigger: AGAGAGTTCAGGAAATTCCAATGCAGGTAGCAGTGC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGACAGCAGCTGTGGTTTaGAAGTGCAACAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGTAAVV*KCNNFK
Trigger: CTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGT...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGTGCGTGGTTGCCGTCTaGCTGCTGGGACTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQCVVAV*LLGLRE
Trigger: CTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCA...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTCTGGTGGCACCCTTTaGGGTTTAGATTCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSGGTL*GLDSFG
Trigger: ACCAAAAGAATCTAAACCCAAAAGGGTGCCACCAGA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGAGTCTGCATTGGTTTaGCCTCGATCTCTATCATTC +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPESALV*PRSLSF
Trigger: GAATGATAGAGATCGAGGCAAAACCAATGCAGACTC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTCATCACTCGGTTCCTaGGATATATCTTCTAAGCGC +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPSSLGS*DISSKR
Trigger: GCGCTTAGAAGATATATCCAAGGAACCGAGTGATGA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTCCTTTGGCTAAATATTaGGAGGCTAGTGACAGACAA +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPPLAKY*EASDRQ
Trigger: TTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAGG...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTTTTGGAGTCTGCATaGGTTTTGCCTCGATCTCTA +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPFLESA*VLPRSL
Trigger: TAGAGATCGAGGCAAAACCAATGCAGACTCCAAAAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTAAAGAATTCTCGGAGTaGATTCTCTGCTCCATTTGC +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPKEFSE*ILCSIC
Trigger: GCAAATGGAGCAGAGAATCAACTCCGAGAATTCTTT...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTTTGCTTTGTGTTCCTaGTGTTTGGTGGATTCTGTA +
Preference number: 5 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGFALCS*CLVDSV
Trigger: TACAGAATCCACCAAACACAAGGAACACAAAGCAAA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCCAGTGCAAGCTTCGTTaGCCAAGTCCCCAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: TVILPNTPPLSASFVCQVQCKLR*PSPQSG
Trigger: GCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTG...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS TCA 90 bp TTGGTCACTATTCCTGGTAGAATGGTGGCCAGAATTGCCAGAATTTaGAGGTGCCAAGCCTGCAGAAGAGCCATCAGTTTCATCACTCGG +
Preference number: 5 (lower is better)
Translates to: LVTIPGRMVARIARI*RCQACRRAISFITR
Trigger: CCGAGTGATGAAACTGATGGCTCTTCTGCAGGCTTGGCACCTTCAAATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CCA 90 bp GTGCCAAGCCTGCAGAAGAGCCATCAGTTTCATCACTCGGTTCCTTaGATATATCTTCTAAGCGCAACACATCACCAGGTGTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: VPSLQKSHQFHHSVP*IYLLSATHHQVSSV
Trigger: CACTGAAGACACCTGGTGATGTGTTGCGCTTAGAAGATATATCCAAGGAACCGAGTGATGAAACTGATGGCTCTTCTGCAGGCTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTTGCTTTGTGTTCCTaGTGTTTGGTGGATTCTGTA +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPFALCS*CLVDSV
Trigger: TACAGAATCCACCAAACACAAGGAACACAAAGCAAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGAAGGTGCTGCAGGGCTaGGGATACATGGCACAACTT +
Preference number: 5 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRKVLQG*GYMAQL
Trigger: AAGTTGTGCCATGTATCCCAAGCCCTGCAGCACCTT...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTGACGTTCTAAGGTATTaGTGTAAGTTCCAGGATGAA +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPDVLRY*CKFQDE
Trigger: TTCATCCTGGAACTTACACAAATACCTTAGAACGTC...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp CTCTACCATCCCATTCACCGGGCAATAGCAGCAGGAGGGAGACAAAGCATGGGGTTGCTGTACATTTTCTaGGCATTCATTGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: LYHPIHRAIAAGGRQSMGLLYIF*AFIGFC
Trigger: ACAGAATCCAATGAATGCCAAGAAAATGTACAGCAA...CCCCATGCTTTGTCTCCCTCCTGCTGCTATTGCCCGGTGAATGGGATGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS CCA 90 bp ATTTGTGTAAGTTCCAGGATGAACATGTCCCTTCATTTACAGATGTaGTCTCCAAAGCAGGGGGTGTGCAAGGTGATCCATTGGGGTGCA +
Preference number: 5 (lower is better)
Translates to: ICVSSRMNMSLHLQM*SPKQGVCKVIHWGA
Trigger: TGCACCCCAATGGATCACCTTGCACACCCCCTGCTTTGGAGACCACATCTGTAAATGAAGGGACATGTTCATCCTGGAACTTACACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp CCAACCACAGGAGGTTGTGGGGATGACTGGAGAGTTCATTTATGCCCAGACAGAAAAGAATTCTCGGAGTaGATTCTCTGCTCCATTTGC +
Preference number: 5 (lower is better)
Translates to: PTTGGCGDDWRVHLCPDRKEFSE*ILCSIC
Trigger: GCAAATGGAGCAGAGAATCAACTCCGAGAATTCTTT...TCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTTAAGGAAAGACTGCTaGCTTCTGAGAAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPLRKDC*LLRKNS
Trigger: AGAATTCTTTCTCAGAAGCAAGCAGTCTTTCCTTAA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS-3UTR CAA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGGAATGGTGGCCAGAATaGCCAGAATTTGAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: QKQNANLPKGDKGTTAIREWWPE*PEFEGA
Trigger: GGCACCTTCAAATTCTGGCAATTCTGGCCACCATTC...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCGAGAGGAACCAGCACTaGGAACACGGGAAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: TVILPNTPPLSASFVCQVERNQH*EHGKVK
Trigger: CTTTACTTTCCCGTGTTCCAAGTGCTGGTTCCTCTC...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTAACTGGAACTTGGTCTaGCTTTCCATGTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: PQLETLEHSGEQVTQANTNWNLV*LSMSNF
Trigger: GAAGTTGGACATGGAAAGCAAGACCAAGTTCCAGTT...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp AACCAAGAGGGAAAATTAAACCCAACTGGAACTTGGTCTTGCTTTCCATGTCCACAGTGCAAGCTTCGTTaGCCAAGTCCCCAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: NQEGKLNPTGTWSCFPCPQCKLR*PSPQSG
Trigger: GCCACTTTGGGGACTTGGCAAACGAAGCTTGCACTG...TGGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTTAATTTTCCCTCTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GTGGCTCAATCACAGCTCACTACAGCCTTGACCTCCTTGGGCTCAGGTGATCCTTATGCTAACAAACCTTaGTGTGTCTTCCATTTCCTT +
Preference number: 5 (lower is better)
Translates to: VAQSQLTTALTSLGSGDPYANKP*CVFHFL
Trigger: AAGGAAATGGAAGACACACAAAGGTTTGTTAGCATA...AGGATCACCTGAGCCCAAGGAGGTCAAGGCTGTAGTGAGCTGTGATTGAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS CCA 90 bp TGGGGTTTCTGCATCTTAGTCTCCTTGGTACCTGCCACTTGGATTTaGTCACTATTCCTGGTAGAATGGTGGCCAGAATTGCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: WGFCILVSLVPATWI*SLFLVEWWPELPEF
Trigger: AAATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGACCAAATCCAAGTGGCAGGTACCAAGGAGACTAAGATGCAGAAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS-3UTR CAA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGACTTCTGGAGCTGTTATaGAAGATGTCAGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGLLELL*KMSASA
Trigger: GGCAGAAGCTGACATCTTCAATAACAGCTCCAGAAG...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGCTTCTGGAGCTGTTATaGAAGATGTCAGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRLLELL*KMSASA
Trigger: GGCAGAAGCTGACATCTTCAATAACAGCTCCAGAAG...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CAGAAACAAAATGCAAACCTTCCAAAAGGTGACAAAGGCACCACTGCCATCAGGGCACTGCTACCTGCATaGGAATTTCCTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: QKQNANLPKGDKGTTAIRALLPA*EFPELS
Trigger: AGAGAGTTCAGGAAATTCCAATGCAGGTAGCAGTGC...CCTGATGGCAGTGGTGCCTTTGTCACCTTTTGGAAGGTTTGCATTTTGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTCTCATGGAAACAAGGTaGTTGGAAACTTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: PQLETLEHSGEQVTQANTLMETR*LETCPD
Trigger: ATCTGGACAAGTTTCCAACAACCTTGTTTCCATGAG...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCTCTGGTGGCACCCTTTaGGGTTTAGATTCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: TVILPNTPPLSASFVCQVSGGTL*GLDSFG
Trigger: ACCAAAAGAATCTAAACCCAAAAGGGTGCCACCAGA...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGATCATCACTCGGTTCCTaGGATATATCTTCTAAGCGC +
Preference number: 5 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGSSLGS*DISSKR
Trigger: GCGCTTAGAAGATATATCCAAGGAACCGAGTGATGA...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCACAACTGGAGACACTAGAGCACTCAGGAGAACAGGTCACTCAAGCCAATACTTTCTTTAGAAATTCCTaGTGCTCTTCTAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: PQLETLEHSGEQVTQANTFFRNS*CSSKRP
Trigger: TGGCCTCTTAGAAGAGCACAAGGAATTTCTAAAGAA...AGTATTGGCTTGAGTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCAACCACAGGAGGTTGTGGGGATGACTGGAGAGTTCATTTATGCCCAGACAGAAATAATGCCATCTGGTaGTTCAGCCTTTTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PTTGGCGDDWRVHLCPDRNNAIW*FSLFLQ
Trigger: TTGAAGAAAAAGGCTGAACAACCAGATGGCATTATT...TCTGTCTGGGCATAAATGAACTCTCCAGTCATCCCCACAACCTCCTGTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS TCA 90 bp AGCCCCTTGGAAAGAGCAGGAGGCTTTCCTGTAGCTGCAGGAGTCTaGTTGAAGTTCAAAGCCATTATTTCTTCCAGTGACTTTAATGTT +
Preference number: 5 (lower is better)
Translates to: SPLERAGGFPVAAGV*LKFKAIISSSDFNV
Trigger: AACATTAAAGTCACTGGAAGAAATAATGGCTTTGAACTTCAATCAGACTCCTGCAGCTACAGGAAAGCCTCCTGCTCTTTCCAAGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS-3UTR CAA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTTTTTTGGAGTCTGCATaGGTTTTGCCTCGATCTCTA +
Preference number: 5 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTFLESA*VLPRSL
Trigger: TAGAGATCGAGGCAAAACCAATGCAGACTCCAAAAA...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp ACAGTAATATTGCCAAACACACCACCACTCAGTGCAAGCTTCGTTTGCCAAGTCAGGAAAATGCATGGATaGAAACCTCCCTGTGGTTTA +
Preference number: 5 (lower is better)
Translates to: TVILPNTPPLSASFVCQVRKMHG*KPPCGL
Trigger: TAAACCACAGGGAGGTTTCAATCCATGCATTTTCCT...GACTTGGCAAACGAAGCTTGCACTGAGTGGTGGTGTGTTTGGCAATATTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAACAGCAGCTGTGGTTTaGAAGTGCAACAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSTAAVV*KCNNFK
Trigger: CTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGT...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTTGCCTTATGTCTTCTTGTAGTTGCTTCTGCAGTTCATCTAGCCTTTGTGTGCCTTTGGCTAAATATTaGGAGGCTAGTGACAGACAA +
Preference number: 5 (lower is better)
Translates to: PCLMSSCSCFCSSSSLCVPLAKY*EASDRQ
Trigger: TTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAGG...CACACAAAGGCTAGATGAACTGCAGAAGCAACTACAAGAAGACATAAGGCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACGAATGGTGGCCAGAATaGCCAGAATTTGAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYEWWPE*PEFEGA
Trigger: GGCACCTTCAAATTCTGGCAATTCTGGCCACCATTC...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp ACACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATGAGAGGAACCAGCACTaGGAACACGGGAAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: THTQTQCPKEFRCLPKLYERNQH*EHGKVK
Trigger: CTTTACTTTCCCGTGTTCCAAGTGCTGGTTCCTCTC...ATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTGCACTGCTACCTGCATaGGAATTTCCTGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIALLPA*EFPELS
Trigger: AGAGAGTTCAGGAAATTCCAATGCAGGTAGCAGTGC...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGAATTCAAGTGGCACATTaGCTGTACATTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGIQVAH*LYIFLA
Trigger: TGCCAAGAAAATGTACAGCAAATGTGCCACTTGAAT...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTATTCAAGTGGCACATTaGCTGTACATTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTIQVAH*LYIFLA
Trigger: TGCCAAGAAAATGTACAGCAAATGTGCCACTTGAAT...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCAAAACCCAACTGGAACTaGGTCTTGCTTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSAKPNWN*VLLSMS
Trigger: GGACATGGAAAGCAAGACCAAGTTCCAGTTGGGTTT...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGAATGGAAACAAGGTTGTaGGAAACTTGTCCAGATCTT +
Preference number: 5 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGMETRL*ETCPDL
Trigger: AAGATCTGGACAAGTTTCCAACAACCTTGTTTCCAT...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTTGCCTTATGTCTTCTTGTAGTTGCTTCTGCAGTTCATCTAGCCTTTGTGTGCTCATGGAAACAAGGTaGTTGGAAACTTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: PCLMSSCSCFCSSSSLCVLMETR*LETCPD
Trigger: ATCTGGACAAGTTTCCAACAACCTTGTTTCCATGAG...CACACAAAGGCTAGATGAACTGCAGAAGCAACTACAAGAAGACATAAGGCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTTTTGGCACAGTAATATaGCCAAACACACCACCACTC +
Preference number: 5 (lower is better)
Translates to: GLTLGASISLGSWKLDLLFGTVI*PNTPPL
Trigger: GAGTGGTGGTGTGTTTGGCAATATTACTGTGCCAAA...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TGGCATCAAAACAGGGCCACTACTTTACAGCTTAACCTCTTCCTCTTAAGGGGAAAAGCAAGCTACTATTaGCGCTTGAAAGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: WHQNRATTLQLNLFLLRGKASYY*RLKAET
Trigger: TGTTTCTGCTTTCAAGCGCAAATAGTAGCTTGCTTT...TCCCCTTAAGAGGAAGAGGTTAAGCTGTAAAGTAGTGGCCCTGTTTTGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GGTCTGACTCTTGGAGCCTCAATCAGTTTAGGTTCTTGGAAACTGGATTTACTTCCTTTGGCTAAATATTaGGAGGCTAGTGACAGACAA +
Preference number: 5 (lower is better)
Translates to: GLTLGASISLGSWKLDLLPLAKY*EASDRQ
Trigger: TTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAGG...AAGTAAATCCAGTTTCCAAGAACCTAAACTGATTGAGGCTCCAAGAGTCAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTTTGCTGTACATTTTCTaGGCATTCATTGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: PHRWADRCQSFKLLSNRTLLYIF*AFIGFC
Trigger: ACAGAATCCAATGAATGCCAAGAAAATGTACAGCAA...AGTTCTATTTGACAGAAGCTTGAAACTCTGGCATCTATCTGCCCAACGATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGAACTGGAACTTGGTCTaGCTTTCCATGTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQNWNLV*LSMSNF
Trigger: GAAGTTGGACATGGAAAGCAAGACCAAGTTCCAGTT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TTAAATTACAGAACGAAAGCCCCCATCGTTGGGCAGATAGATGCCAGAGTTTCAATGGAAACAAGGTTGTaGGAAACTTGTCCAGATCTT +
Preference number: 5 (lower is better)
Translates to: LNYRTKAPIVGQIDARVSMETRL*ETCPDL
Trigger: AAGATCTGGACAAGTTTCCAACAACCTTGTTTCCAT...TGAAACTCTGGCATCTATCTGCCCAACGATGGGGGCTTTCGTTCTGTAATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACGTGCAAGGTGATCCATaGGGGTGCAGGAAGAAAATA +
Preference number: 5 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYVQGDP*GCRKKI
Trigger: TATTTTCTTCCTGCACCCCAATGGATCACCTTGCAC...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp ACATACACAGACACAGTGTCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACGAGTCTGCATTGGTTTaGCCTCGATCTCTATCATTC +
Preference number: 5 (lower is better)
Translates to: TYTDTVSQRIQVSAKIIYESALV*PRSLSF
Trigger: GAATGATAGAGATCGAGGCAAAACCAATGCAGACTC...GTATATAATTTTGGCAGACACCTGAATTCTTTGGGACACTGTGTCTGTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGAAAGAATTCTCGGAGTaGATTCTCTGCTCCATTTGC +
Preference number: 5 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQKEFSE*ILCSIC
Trigger: GCAAATGGAGCAGAGAATCAACTCCGAGAATTCTTT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTTGCCTTATGTCTTCTTGTAGTTGCTTCTGCAGTTCATCTAGCCTTTGTGTGTTTTTCTACAGCACTTaGTCCAATAAAACCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PCLMSSCSCFCSSSSLCVFFYST*SNKTRV
Trigger: GACTCTGGTTTTATTGGACAAAGTGCTGTAGAAAAA...CACACAAAGGCTAGATGAACTGCAGAAGCAACTACAAGAAGACATAAGGCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp TGCAGTTCATCTAGCCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGCACAAAGTGTTTCCGTaGTCCAGAAGAAAAAGAATG +
Preference number: 5 (lower is better)
Translates to: CSSSSLCVSSISFTRRSKHKVFP*SRRKRM
Trigger: CATTCTTTTTCTTCTGGACAACGGAAACACTTTGTG...CTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGCTAGATGAACTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp AGAATTTACAGCAGCTGTGGTTTTGAAGTGCAACAACTTCAAGATACAAGCGCATCTGACTGCCAATGCTaGATTGACATGAGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: RIYSSCGFEVQQLQDTSASDCQC*IDMSSK
Trigger: TTTTGAGCTCATGTCAATCAAGCATTGGCAGTCAGA...TGCGCTTGTATCTTGAAGTTGTTGCACTTCAAAACCACAGCTGCTGTAAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS CCA 90 bp GATATGAAGAAGGAACATAGATATTTGTTCCTTTGGCTAAATATTTaGAGGCTAGTGACAGACAAGGCCGACGTGACTCATGTATACCAT +
Preference number: 5 (lower is better)
Translates to: DMKKEHRYLFLWLNI*RLVTDKADVTHVYH
Trigger: ATGGTATACATGAGTCACGTCGGCCTTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAGGAACAAATATCTATGTTCCTTCTTCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS-3UTR CAA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTACTTGGTACCTGCCACTaGGATTTGGTCACTATTCCT +
Preference number: 5 (lower is better)
Translates to: DARVSSFCQIELFVSISLLGTCH*DLVTIP
Trigger: AGGAATAGTGACCAAATCCAAGTGGCAGGTACCAAG...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGCTTGGTACCTGCCACTaGGATTTGGTCACTATTCCT +
Preference number: 5 (lower is better)
Translates to: FPSMYLKSALTQYSLYELLGTCH*DLVTIP
Trigger: AGGAATAGTGACCAAATCCAAGTGGCAGGTACCAAG...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGTTCTTTAGAAATTCCTaGTGCTCTTCTAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQFFRNS*CSSKRP
Trigger: TGGCCTCTTAGAAGAGCACAAGGAATTTCTAAAGAA...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTCACAAAGTGTTTCCGTaGTCCAGAAGAAAAAGAATG +
Preference number: 5 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIHKVFP*SRRKRM
Trigger: CATTCTTTTTCTTCTGGACAACGGAAACACTTTGTG...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTTTTGGCACAGTAATATaGCCAAACACACCACCACTC +
Preference number: 5 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCFGTVI*PNTPPL
Trigger: GAGTGGTGGTGTGTTTGGCAATATTACTGTGCCAAA...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGAGCTACTATTTGCGCTaGAAAGCAGAAACAAAATGC +
Preference number: 5 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQSYYLR*KAETKC
Trigger: GCATTTTGTTTCTGCTTTCAAGCGCAAATAGTAGCT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCACTAACCCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTAAAGCAAGCTACTATTaGCGCTTGAAAGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: PLTLYHLNQRMALQCLRIKASYY*RLKAET
Trigger: TGTTTCTGCTTTCAAGCGCAAATAGTAGCTTGCTTT...AATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGGGTTAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS GCA 90 bp CTTTTGGGTTTAGATTCTTTTGGTGAGGATAGTTTCCTTTCAAACTaGTCTGTCCCAGTGATAGACAATCTACTTCCTCCATATTTGATG +
Preference number: 5 (lower is better)
Translates to: LLGLDSFGEDSFLSN*SVPVIDNLLPPYLM
Trigger: CATCAAATATGGAGGAAGTAGATTGTCTATCACTGGGACAGAGCAGTTTGAAAGGAAACTATCCTCACCAAAAGAATCTAAACCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS-3UTR CAA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTATCATCACTCGGTTCCTaGGATATATCTTCTAAGCGC +
Preference number: 5 (lower is better)
Translates to: DARVSSFCQIELFVSISLSSLGS*DISSKR
Trigger: GCGCTTAGAAGATATATCCAAGGAACCGAGTGATGA...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp CCTCTACCATTTAAACCAAAGGATGGCTCTCCAGTGTTTAAGAATTTACAGCAGAATAATGCCATCTGGTaGTTCAGCCTTTTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PLPFKPKDGSPVFKNLQQNNAIW*FSLFLQ
Trigger: TTGAAGAAAAAGGCTGAACAACCAGATGGCATTATT...CTGCTGTAAATTCTTAAACACTGGAGAGCCATCCTTTGGTTTAAATGGTAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TCCCAAAGAATTCAGGTGTCTGCCAAAATTATATACTCATGGAAACAAGGTTGTTCTGACTGCCAATGCTaGATTGACATGAGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SQRIQVSAKIIYSWKQGCSDCQC*IDMSSK
Trigger: TTTTGAGCTCATGTCAATCAAGCATTGGCAGTCAGA...ACAACCTTGTTTCCATGAGTATATAATTTTGGCAGACACCTGAATTCTTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGCTCCAACTCAGTAGCTaGTTTAATGGGCTACCTCTT +
Preference number: 5 (lower is better)
Translates to: FPSMYLKSALTQYSLYELLQLSS*FNGLPL
Trigger: AAGAGGTAGCCCATTAAACAAGCTACTGAGTTGGAG...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS-3UTR CAA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAGACGTTCTAAGGTATTaGTGTAAGTTCCAGGATGAA +
Preference number: 5 (lower is better)
Translates to: DARVSSFCQIELFVSISLDVLRY*CKFQDE
Trigger: TTCATCCTGGAACTTACACAAATACCTTAGAACGTC...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp GATGCCAGAGTTTCAAGCTTCTGTCAAATAGAACTCTTTGTATCTATCTCTTTAAGCTACTATTTGCGCTaGAAAGCAGAAACAAAATGC +
Preference number: 5 (lower is better)
Translates to: DARVSSFCQIELFVSISLSYYLR*KAETKC
Trigger: GCATTTTGTTTCTGCTTTCAAGCGCAAATAGTAGCT...TAAAGAGATAGATACAAAGAGTTCTATTTGACAGAAGCTTGAAACTCTGGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000649226.1
CDS-3UTR CAA 90 bp TTTCCATCAATGTACTTAAAATCTGCACTGACACAATACAGTCTGTATGAACTGTTAAGGAAAGACTGCTaGCTTCTGAGAAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: FPSMYLKSALTQYSLYELLRKDC*LLRKNS
Trigger: AGAATTCTTTCTCAGAAGCAAGCAGTCTTTCCTTAA...CAGTTCATACAGACTGTATTGTGTCAGTGCAGATTTTAAGTACATTGATGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS CAA 90 bp TGTCGGCGCCGCTGGCGACGGCGGCATGAGCCGTGGCTGGAGAAGTaGGGTGCGTGGTTGCCGTCTTGCTGCTGGGACTCCGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: CRRRWRRRHEPWLEK*GAWLPSCCWDSGRL
Trigger: CAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGCGGCGCCGACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CCA 72 bp CGGCGGCATGAGCCGTGGCTGGAGAAGTTGGGTGCGTaGTTGCCGTCTTGCTGCTGGGACTCCGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: RRHEPWLEKLGA*LPSCCWDSGRL
Trigger: CAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CCA 72 bp GCTGGCGACGGCGGCATGAGCCGTGGCTGGAGAAGTTaGGTGCGTGGTTGCCGTCTTGCTGCTGGGACTCCG +
Preference number: 6 (lower is better)
Translates to: AGDGGMSRGWRS*VRGCRLAAGTP
Trigger: CGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CCA 72 bp TCATGTCGGCGCCGCTGGCGACGGCGGCATGAGCCGTaGCTGGAGAAGTTGGGTGCGTGGTTGCCGTCTTGC +
Preference number: 6 (lower is better)
Translates to: SCRRRWRRRHEP*LEKLGAWLPSC
Trigger: GCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGCGGCGCCGACATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CAA 72 bp CGCTGGCGACGGCGGCATGAGCCGTGGCTGGAGAAGTaGGGTGCGTGGTTGCCGTCTTGCTGCTGGGACTCC +
Preference number: 6 (lower is better)
Translates to: RWRRRHEPWLEK*GAWLPSCCWDS
Trigger: GGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCGCCGTCGCCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CCA 72 bp ATGCCAACGCCTGAGCTCGCGGAGGATGGCGGGAACTaGAAGAGCGGCGGTCTGCAGCCCTCCCCTCATACC +
Preference number: 6 (lower is better)
Translates to: MPTPELAEDGGN*KSGGLQPSPHT
Trigger: GGTATGAGGGGAGGGCTGCAGACCGCCGCTCTTCCAGTTCCCGCCATCCTCCGCGAGCTCAGGCGTTGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS CAA 72 bp CGGCATGAGCCGTGGCTGGAGAAGTTGGGTGCGTGGTaGCCGTCTTGCTGCTGGGACTCCGGGAGGCTGTCG +
Preference number: 6 (lower is better)
Translates to: RHEPWLEKLGAW*PSCCWDSGRLS
Trigger: CGACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCACGGCTCATGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS GCA 72 bp TGGCTGGAGAAGTTGGGTGCGTGGTTGCCGTCTTGCTaGTGGGACTCCGGGAGGCTGTCGGAGCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: WLEKLGAWLPSC*WDSGRLSEQRW
Trigger: CCACCTCTGCTCCGACAGCCTCCCGGAGTCCCAGCAGCAAGACGGCAACCACGCACCCAACTTCTCCAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS CCA 72 bp TCCCCAGGACTCTCTGTTCTCTTTCCCGCTGCAGCATaGGCGGTACTACCGGGTCTCAGATGGCAGCGCGGG +
Preference number: 6 (lower is better)
Translates to: SPGLSVLFPAAA*AVLPGLRWQRG
Trigger: CCCGCGCTGCCATCTGAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACAGAGAGTCCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000609386.1
ENST00000649226.1
CDS GCA 72 bp CTTCCTGTCCCCAGGACTCTCTGTTCTCTTTCCCGCTaGAGCATGGGCGGTACTACCGGGTCTCAGATGGCA +
Preference number: 6 (lower is better)
Translates to: LPVPRTLCSLSR*SMGGTTGSQMA
Trigger: TGCCATCTGAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACAGAGAGTCCTGGGGACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS GCA 72 bp GTACCTGTCCCCAGGACTCTCTGTTCTCTTTCCCGCTaGAGCATGGGCGGTACTACCGGGTCTCAGATGGCA +
Preference number: 6 (lower is better)
Translates to: VPVPRTLCSLSR*SMGGTTGSQMA
Trigger: TGCCATCTGAGACCCGGTAGTACCGCCCATGCTGCAGCGGGAAAGAGAACAGAGAGTCCTGGGGACAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609386.1
CDS CCA 72 bp AACTGGAATTTAGCTCCCAGTGGGCTTTCTTCCGGGTaGTGCCTGGACAGGCTGCTCCTGCTGCTAAGGCTT +
Preference number: 6 (lower is better)
Translates to: NWNLAPSGLSSG*CLDRLLLLLRL
Trigger: AAGCCTTAGCAGCAGGAGCAGCCTGTCCAGGCACCACCCGGAAGAAAGCCCACTGGGAGCTAAATTCCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 90 bp AACTCTCTCCTTCTGAAGGGGCTTTATCTGAAGGTGCTGCAGGGCTaGGGATACATGGCACAACTTCCAAAGCAGCAGGGGGAGACTTTG +
Preference number: 6 (lower is better)
Translates to: NSLLLKGLYLKVLQG*GYMAQLPKQQGETL
Trigger: CAAAGTCTCCCCCTGCTGCTTTGGAAGTTGTGCCATGTATCCCAAGCCCTGCAGCACCTTCAGATAAAGCCCCTTCAGAAGGAGAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 90 bp GGTGCCAAGCCTGCAGAAGAGCCATCAGTTTCATCACTCGGTTCCTaGGATATATCTTCTAAGCGCAACACATCACCAGGTGTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: GAKPAEEPSVSSLGS*DISSKRNTSPGVFS
Trigger: ACTGAAGACACCTGGTGATGTGTTGCGCTTAGAAGATATATCCAAGGAACCGAGTGATGAAACTGATGGCTCTTCTGCAGGCTTGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 90 bp GCCACTTGGATTTGGTCACTATTCCTGGTAGAATGGTGGCCAGAATaGCCAGAATTTGAAGGTGCCAAGCCTGCAGAAGAGCCATCAGTT +
Preference number: 6 (lower is better)
Translates to: ATWIWSLFLVEWWPE*PEFEGAKPAEEPSV
Trigger: AACTGATGGCTCTTCTGCAGGCTTGGCACCTTCAAATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGACCAAATCCAAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CCA 72 bp AGTTCCAGGATGAACATGTCCCTTCATTTACAGATGTaGTCTCCAAAGCAGGGGGTGTGCAAGGTGATCCAT +
Preference number: 6 (lower is better)
Translates to: SSRMNMSLHLQM*SPKQGVCKVIH
Trigger: ATGGATCACCTTGCACACCCCCTGCTTTGGAGACCACATCTGTAAATGAAGGGACATGTTCATCCTGGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS CAA 90 bp GTGGGGTTTCTGCATCTTAGTCTCCTTGGTACCTGCCACTTGGATTaGGTCACTATTCCTGGTAGAATGGTGGCCAGAATTGCCAGAATT +
Preference number: 6 (lower is better)
Translates to: VGFLHLSLLGTCHLD*VTIPGRMVARIARI
Trigger: AATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGACCAAATCCAAGTGGCAGGTACCAAGGAGACTAAGATGCAGAAACCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS GCA 72 bp GTCAGCTTCTGCCACTGTGGTCTGCTTTTTGGAGTCTaGATTGGTTTTGCCTCGATCTCTATCATTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VSFCHCGLLFGV*IGFASISIILL
Trigger: GAGAAGAATGATAGAGATCGAGGCAAAACCAATGCAGACTCCAAAAAGCAGACCACAGTGGCAGAAGCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS GCA 72 bp AAGGCTTCTGGAGCTGTTATTGAAGATGTCAGCTTCTaGCACTGTGGTCTGCTTTTTGGAGTCTGCATTGGT +
Preference number: 6 (lower is better)
Translates to: KASGAVIEDVSF*HCGLLFGVCIG
Trigger: ACCAATGCAGACTCCAAAAAGCAGACCACAGTGGCAGAAGCTGACATCTTCAATAACAGCTCCAGAAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CCA 72 bp CTGCAGAAGAGCCATCAGTTTCATCACTCGGTTCCTTaGATATATCTTCTAAGCGCAACACATCACCAGGTG +
Preference number: 6 (lower is better)
Translates to: LQKSHQFHHSVP*IYLLSATHHQV
Trigger: CACCTGGTGATGTGTTGCGCTTAGAAGATATATCCAAGGAACCGAGTGATGAAACTGATGGCTCTTCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 72 bp CCTGCAGAAGAGCCATCAGTTTCATCACTCGGTTCCTaGGATATATCTTCTAAGCGCAACACATCACCAGGT +
Preference number: 6 (lower is better)
Translates to: PAEEPSVSSLGS*DISSKRNTSPG
Trigger: ACCTGGTGATGTGTTGCGCTTAGAAGATATATCCAAGGAACCGAGTGATGAAACTGATGGCTCTTCTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 72 bp ATTTGGTCACTATTCCTGGTAGAATGGTGGCCAGAATaGCCAGAATTTGAAGGTGCCAAGCCTGCAGAAGAG +
Preference number: 6 (lower is better)
Translates to: IWSLFLVEWWPE*PEFEGAKPAEE
Trigger: CTCTTCTGCAGGCTTGGCACCTTCAAATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGACCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 72 bp CTGCATCTTAGTCTCCTTGGTACCTGCCACTTGGATTaGGTCACTATTCCTGGTAGAATGGTGGCCAGAATT +
Preference number: 6 (lower is better)
Translates to: LHLSLLGTCHLD*VTIPGRMVARI
Trigger: AATTCTGGCCACCATTCTACCAGGAATAGTGACCAAATCCAAGTGGCAGGTACCAAGGAGACTAAGATGCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS TCA 72 bp GAAAGAGCAGGAGGCTTTCCTGTAGCTGCAGGAGTCTaGTTGAAGTTCAAAGCCATTATTTCTTCCAGTGAC +
Preference number: 6 (lower is better)
Translates to: ERAGGFPVAAGV*LKFKAIISSSD
Trigger: GTCACTGGAAGAAATAATGGCTTTGAACTTCAATCAGACTCCTGCAGCTACAGGAAAGCCTCCTGCTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 90 bp GAGCTGTTATTGAAGATGTCAGCTTCTGCCACTGTGGTCTGCTTTTaGGAGTCTGCATTGGTTTTGCCTCGATCTCTATCATTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: ELLLKMSASATVVCF*ESALVLPRSLSFFS
Trigger: TGAGAAGAATGATAGAGATCGAGGCAAAACCAATGCAGACTCCAAAAAGCAGACCACAGTGGCAGAAGCTGACATCTTCAATAACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS GCA 72 bp TGGTCCATCAGGACGCTTCTCAAGGAAGGACTCTCTTaGTTTTGGTATCATAGATTCTCTTGTGCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: WSIRTLLKEGLS*FWYHRFSCAFQ
Trigger: CTGAAAAGCACAAGAGAATCTATGATACCAAAAGCAAGAGAGTCCTTCCTTGAGAAGCGTCCTGATGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 72 bp GCTTCTGCCACTGTGGTCTGCTTTTTGGAGTCTGCATaGGTTTTGCCTCGATCTCTATCATTCTTCTCATTA +
Preference number: 6 (lower is better)
Translates to: ASATVVCFLESA*VLPRSLSFFSL
Trigger: TAATGAGAAGAATGATAGAGATCGAGGCAAAACCAATGCAGACTCCAAAAAGCAGACCACAGTGGCAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 72 bp GAAAGACTGCTTGCTTCTGAGAAAGAATTCTCGGAGTaGATTCTCTGCTCCATTTGCTCCTTTCTCAACCTC +
Preference number: 6 (lower is better)
Translates to: ERLLASEKEFSE*ILCSICSFLNL
Trigger: GAGGTTGAGAAAGGAGCAAATGGAGCAGAGAATCAACTCCGAGAATTCTTTCTCAGAAGCAAGCAGTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS TCA 72 bp AAAGACTGCTTGCTTCTGAGAAAGAATTCTCGGAGTTaGTTCTCTGCTCCATTTGCTCCTTTCTCAACCTCT +
Preference number: 6 (lower is better)
Translates to: KDCLLLRKNSRS*FSAPFAPFSTS
Trigger: AGAGGTTGAGAAAGGAGCAAATGGAGCAGAGAATCAACTCCGAGAATTCTTTCTCAGAAGCAAGCAGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS GCA 72 bp GCTTTGTGTTCCTTGTGTTTGGTGGATTCTGTAGAATaGCCAGAACATTCTTTAGATGAGGAACGCTCTTTA +
Preference number: 6 (lower is better)
Translates to: ALCSLCLVDSVE*PEHSLDEERSL
Trigger: TAAAGAGCGTTCCTCATCTAAAGAATGTTCTGGGCATTCTACAGAATCCACCAAACACAAGGAACACAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CCA 72 bp AAGGAACATAGATATTTGTTCCTTTGGCTAAATATTTaGAGGCTAGTGACAGACAAGGCCGACGTGACTCAT +
Preference number: 6 (lower is better)
Translates to: KEHRYLFLWLNI*RLVTDKADVTH
Trigger: ATGAGTCACGTCGGCCTTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAGGAACAAATATCTATGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 72 bp GCTTCTATAATAGGGCTCTTTTCTGGTGGCACCCTTTaGGGTTTAGATTCTTTTGGTGAGGATAGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: ASIIGLFSGGTL*GLDSFGEDSFL
Trigger: AAGGAAACTATCCTCACCAAAAGAATCTAAACCCAAAAGGGTGCCACCAGAAAAGAGCCCTATTATAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 72 bp GCCACTGTGGTCTGCTTTTTGGAGTCTGCATTGGTTTaGCCTCGATCTCTATCATTCTTCTCATTATTTTCA +
Preference number: 6 (lower is better)
Translates to: ATVVCFLESALV*PRSLSFFSLFS
Trigger: TGAAAATAATGAGAAGAATGATAGAGATCGAGGCAAAACCAATGCAGACTCCAAAAAGCAGACCACAGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 90 bp GCCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGGTATTaGTGTAAGTTCCAGGATGAACATGTCCTGTATAGTCTGATGACT +
Preference number: 6 (lower is better)
Translates to: AFVCLPFPSLDVLRY*CKFQDEHVLYSLMT
Trigger: AGTCATCAGACTATACAGGACATGTTCATCCTGGAACTTACACAAATACCTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238961.9
ENST00000370269.3
CDS CAA 90 bp GCCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGGTATTaGTGTAAGTTCCAGGATGAACATGTCCCTTCATTTACAGATGTG +
Preference number: 6 (lower is better)
Translates to: AFVCLPFPSLDVLRY*CKFQDEHVPSFTDV
Trigger: CACATCTGTAAATGAAGGGACATGTTCATCCTGGAACTTACACAAATACCTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649226.1
CDS CAA 90 bp TTCATGAAAGCTTCTATAATAGGGCTCTTTTCTGGTGGCACCCTTTaGGGTTTAGATTCTTTTGGTGAGGATAGTTTCCTTTCAAACTGC +
Preference number: 6 (lower is better)
Translates to: FMKASIIGLFSGGTL*GLDSFGEDSFLSNC
Trigger: GCAGTTTGAAAGGAAACTATCCTCACCAAAAGAATCTAAACCCAAAAGGGTGCCACCAGAAAAGAGCCCTATTATAGAAGCTTTCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 90 bp ACTTCATCTCCTTTGGCAAGTGATATGAAGAAGGAACATAGATATTaGTTCCTTTGGCTAAATATTTGGAGGCTAGTGACAGACAAGGCC +
Preference number: 6 (lower is better)
Translates to: TSSPLASDMKKEHRY*FLWLNIWRLVTDKA
Trigger: GGCCTTGTCTGTCACTAGCCTCCAAATATTTAGCCAAAGGAACAAATATCTATGTTCCTTCTTCATATCACTTGCCAAAGGAGATGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 90 bp GATTTTAAGGAAAGACTGCTTGCTTCTGAGAAAGAATTCTCGGAGTaGATTCTCTGCTCCATTTGCTCCTTTCTCAACCTCTTTAGTTCT +
Preference number: 6 (lower is better)
Translates to: DFKERLLASEKEFSE*ILCSICSFLNLFSS
Trigger: AGAACTAAAGAGGTTGAGAAAGGAGCAAATGGAGCAGAGAATCAACTCCGAGAATTCTTTCTCAGAAGCAAGCAGTCTTTCCTTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS CAA 90 bp ACCTTTGTGTGTCTTCCATTTCCTTCACTAGACGTTCTAAGGTATTaGTGTAAGTTCCAGGATGAACATGTCCTGTATAGTCTGATGACT +
Preference number: 6 (lower is better)
Translates to: TFVCLPFPSLDVLRY*CKFQDEHVLYSLMT
Trigger: AGTCATCAGACTATACAGGACATGTTCATCCTGGAACTTACACAAATACCTTAGAACGTCTAGTGAAGGAAATGGAAGACACACAAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370271.7
CDS GCA 72 bp TTAGATTCTTTTGGTGAGGATAGTTTCCTTTCAAACTaGTCTGTCCCAGTGATAGACAATCTACTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: LDSFGEDSFLSN*SVPVIDNLLPP
Trigger: TGGAGGAAGTAGATTGTCTATCACTGGGACAGAGCAGTTTGAAAGGAAACTATCCTCACCAAAAGAATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238961.9
ENST00000370269.3
ENST00000370271.7
ENST00000649226.1
CDS GCA 72 bp AATAGAACATTTCCATTCCCCTCAAAAGTCTCTTTATaGCAAATCCAAGTCAATCTGCTATCCCTGACTCAA +
Preference number: 6 (lower is better)
Translates to: NRTFPFPSKVSL*QIQVNLLSLTQ
Trigger: TTGAGTCAGGGATAGCAGATTGACTTGGATTTGGCATAAAGAGACTTTTGAGGGGAATGGAAATGTTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481654.1
CDS TCA 72 bp TCTCTTTATGCCAAATCCAAGTCAATCTGCTATCCCTaGCTCAAGGCAAACACTAATGATTTCTATCATTAT +
Preference number: 6 (lower is better)
Translates to: SLYAKSKSICYP*LKANTNDFYHY
Trigger: ATAATGATAGAAATCATTAGTGTTTGCCTTGAGTCAGGGATAGCAGATTGACTTGGATTTGGCATAAAGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481654.1