Pregenerated sensors for SLCO6A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000205359Ensembl transcript IDs: ENST00000379807.7, ENST00000389019.7, ENST00000505407.1, ENST00000505739.1, ENST00000506729.6, ENST00000513675.1, ENST00000514551.5
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCGGCTCCTGGCGACGCGGCCCGAGTGCTCTCGGCTGCCCGTCCTaGCTGGGCCAACCCAAAGGCCAGCCTGGCGAGGGCGTCGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GGSWRRGPSALGCPS*LGQPKGQPGEGVGG Trigger: TCCTCCGACGCCCTCGCCAGGCTGGCCTTTGGGTTGGCCCAGGCAGGACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS GCA 90 bp | CTCACCCTGGGCGGCTCCTGGCGACGCGGCCCGAGTGCTCTCGGCTaGCCGTCCTGCCTGGGCCAACCCAAAGGCCAGCCTGGCGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LTLGGSWRRGPSALG*PSCLGQPKGQPGEG Trigger: GCCCTCGCCAGGCTGGCCTTTGGGTTGGCCCAGGCAGGACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS CCA 90 bp | GCTCCTGGCGACGCGGCCCGAGTGCTCTCGGCTGCCCGTCCTGCCTaGGCCAACCCAAAGGCCAGCCTGGCGAGGGCGTCGGAGGACTCG | + |
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Preference number: 5 (lower is better) Translates to: APGDAARVLSAARPA*ANPKASLARASEDS Trigger: CGAGTCCTCCGACGCCCTCGCCAGGCTGGCCTTTGGGTTGGCCCAGGCAGGACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCAGGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS CCA 90 bp | AGTGCCGGGCGACGCCTACGAACATGGCTCACCCTGGGCGGCTCCTaGCGACGCGGCCCGAGTGCTCTCGGCTGCCCGTCCTGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SAGRRLRTWLTLGGS*RRGPSALGCPSCLG Trigger: GCCCAGGCAGGACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAGCCATGTTCGTAGGCGTCGCCCGGCACT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS CCA 90 bp | CTGGCTCCCAGAGTGCCGGGCGACGCCTACGAACATGGCTCACCCTaGGCGGCTCCTGGCGACGCGGCCCGAGTGCTCTCGGCTGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: LAPRVPGDAYEHGSP*AAPGDAARVLSAAR Trigger: ACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAGCCATGTTCGTAGGCGTCGCCCGGCACTCTGGGAGCCAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS GCA 90 bp | ACGAACATGGCTCACCCTGGGCGGCTCCTGGCGACGCGGCCCGAGTaGTCTCGGCTGCCCGTCCTGCCTGGGCCAACCCAAAGGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: TNMAHPGRLLATRPE*SRLPVLPGPTQRPA Trigger: GGCTGGCCTTTGGGTTGGCCCAGGCAGGACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAGCCATGTTCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS CCA 90 bp | TGCTCTCGGCTGCCCGTCCTGCCTGGGCCAACCCAAAGGCCAGCCTaGCGAGGGCGTCGGAGGACTCGGTGGCCACAAGGGGCTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: CSRLPVLPGPTQRPA*RGRRRTRWPQGALA Trigger: GGCAAGAGCCCCTTGTGGCCACCGAGTCCTCCGACGCCCTCGCCAGGCTGGCCTTTGGGTTGGCCCAGGCAGGACGGGCAGCCGAGAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS CCA 90 bp | GGGCCAACCCAAAGGCCAGCCTGGCGAGGGCGTCGGAGGACTCGGTaGCCACAAGGGGCTCTTGCCGCCCAAGCCTCCAGAGCGAACGTT | + |
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Preference number: 5 (lower is better) Translates to: GPTQRPAWRGRRRTR*PQGALAAQASRANV Trigger: AACGTTCGCTCTGGAGGCTTGGGCGGCAAGAGCCCCTTGTGGCCACCGAGTCCTCCGACGCCCTCGCCAGGCTGGCCTTTGGGTTGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389019.7 ENST00000506729.6 |
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| CDS CCA 90 bp | AGACTTCATCCTGGCTCCCAGAGTGCCGGGCGACGCCTACGAACATaGCTCACCCTGGGCGGCTCCTGGCGACGCGGCCCGAGTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: RLHPGSQSAGRRLRT*LTLGGSWRRGPSAL Trigger: GAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAGCCATGTTCGTAGGCGTCGCCCGGCACTCTGGGAGCCAGGATGAAGTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS CCA 90 bp | GCCCGCGCGGCCTCCAGCGGCTCTACTCCCCTTGAGACTTCATCCTaGCTCCCAGAGTGCCGGGCGACGCCTACGAACATGGCTCACCCT | + |
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Preference number: 5 (lower is better) Translates to: ARAASSGSTPLETSS*LPECRATPTNMAHP Trigger: AGGGTGAGCCATGTTCGTAGGCGTCGCCCGGCACTCTGGGAGCCAGGATGAAGTCTCAAGGGGAGTAGAGCCGCTGGAGGCCGCGCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS GCA 90 bp | TCCAGCGGCTCTACTCCCCTTGAGACTTCATCCTGGCTCCCAGAGTaGCGGGCGACGCCTACGAACATGGCTCACCCTGGGCGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SSGSTPLETSSWLPE*RATPTNMAHPGRLL Trigger: CAGGAGCCGCCCAGGGTGAGCCATGTTCGTAGGCGTCGCCCGGCACTCTGGGAGCCAGGATGAAGTCTCAAGGGGAGTAGAGCCGCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS CCA 90 bp | TTCGAGGACTTCGGGGTTCCCTTGGCCCTCCTGTCCTTAGCAGGCTaGGCCCGCGCGGCCTCCAGCGGCTCTACTCCCCTTGAGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: FEDFGVPLALLSLAG*ARAASSGSTPLETS Trigger: TGAAGTCTCAAGGGGAGTAGAGCCGCTGGAGGCCGCGCGGGCCCAGCCTGCTAAGGACAGGAGGGCCAAGGGAACCCCGAAGTCCTCGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000505407.1 ENST00000506729.6 ENST00000513675.1 |
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| CDS TCA 90 bp | TATAAAGAGGCATTCCTGCTATTCCCTGCACAGTCTGCCCAAGGATaGAGAAAGACAGGTATTTTGATTGGAATGATATACCACTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: YKEAFLLFPAQSAQG*RKTGILIGMIYHCS Trigger: AGAGCAGTGGTATATCATTCCAATCAAAATACCTGTCTTTCTTCATCCTTGGGCAGACTGTGCAGGGAATAGCAGGAATGCCTCTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379807.7 ENST00000506729.6 |
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| CDS GCA 72 bp | TGGCGACGCGGCCCGAGTGCTCTCGGCTGCCCGTCCTaGCTGGGCCAACCCAAAGGCCAGCCTGGCGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: WRRGPSALGCPS*LGQPKGQPGEG Trigger: GCCCTCGCCAGGCTGGCCTTTGGGTTGGCCCAGGCAGGACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS GCA 72 bp | GCTCACCCTGGGCGGCTCCTGGCGACGCGGCCCGAGTaGTCTCGGCTGCCCGTCCTGCCTGGGCCAACCCAA | + |
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Preference number: 6 (lower is better) Translates to: AHPGRLLATRPE*SRLPVLPGPTQ Trigger: TTGGGTTGGCCCAGGCAGGACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS CCA 72 bp | GACGCGGCCCGAGTGCTCTCGGCTGCCCGTCCTGCCTaGGCCAACCCAAAGGCCAGCCTGGCGAGGGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: DAARVLSAARPA*ANPKASLARAS Trigger: CGACGCCCTCGCCAGGCTGGCCTTTGGGTTGGCCCAGGCAGGACGGGCAGCCGAGAGCACTCGGGCCGCGTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS CCA 72 bp | CCTGGCTCCCAGAGTGCCGGGCGACGCCTACGAACATaGCTCACCCTGGGCGGCTCCTGGCGACGCGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PGSQSAGRRLRT*LTLGGSWRRGP Trigger: CGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAGCCATGTTCGTAGGCGTCGCCCGGCACTCTGGGAGCCAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS CCA 72 bp | CGACGCCTACGAACATGGCTCACCCTGGGCGGCTCCTaGCGACGCGGCCCGAGTGCTCTCGGCTGCCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RRLRTWLTLGGS*RRGPSALGCPS Trigger: GGACGGGCAGCCGAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAGCCATGTTCGTAGGCGTCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS CCA 72 bp | CTGCCCGTCCTGCCTGGGCCAACCCAAAGGCCAGCCTaGCGAGGGCGTCGGAGGACTCGGTGGCCACAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LPVLPGPTQRPA*RGRRRTRWPQG Trigger: CCCTTGTGGCCACCGAGTCCTCCGACGCCCTCGCCAGGCTGGCCTTTGGGTTGGCCCAGGCAGGACGGGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS CCA 72 bp | AGAGTGCCGGGCGACGCCTACGAACATGGCTCACCCTaGGCGGCTCCTGGCGACGCGGCCCGAGTGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RVPGDAYEHGSP*AAPGDAARVLS Trigger: CGAGAGCACTCGGGCCGCGTCGCCAGGAGCCGCCCAGGGTGAGCCATGTTCGTAGGCGTCGCCCGGCACTCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS CCA 72 bp | CAAAGGCCAGCCTGGCGAGGGCGTCGGAGGACTCGGTaGCCACAAGGGGCTCTTGCCGCCCAAGCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QRPAWRGRRRTR*PQGALAAQASR Trigger: TCTGGAGGCTTGGGCGGCAAGAGCCCCTTGTGGCCACCGAGTCCTCCGACGCCCTCGCCAGGCTGGCCTTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389019.7 ENST00000506729.6 |
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| CDS CAA 90 bp | CAGCCTGGCGAGGGCGTCGGAGGACTCGGTGGCCACAAGGGGCTCTaGCCGCCCAAGCCTCCAGAGCGAACGTTTCTCCTAGGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: QPGEGVGGLGGHKGL*PPKPPERTFLLGQE Trigger: CTCCTGCCCTAGGAGAAACGTTCGCTCTGGAGGCTTGGGCGGCAAGAGCCCCTTGTGGCCACCGAGTCCTCCGACGCCCTCGCCAGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389019.7 |
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| CDS CAA 72 bp | GAGGGCGTCGGAGGACTCGGTGGCCACAAGGGGCTCTaGCCGCCCAAGCCTCCAGAGCGAACGTTTCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: EGVGGLGGHKGL*PPKPPERTFLL Trigger: TAGGAGAAACGTTCGCTCTGGAGGCTTGGGCGGCAAGAGCCCCTTGTGGCCACCGAGTCCTCCGACGCCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389019.7 |
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| CDS CCA 72 bp | GCCTCCAGCGGCTCTACTCCCCTTGAGACTTCATCCTaGCTCCCAGAGTGCCGGGCGACGCCTACGAACATG | + |
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Preference number: 6 (lower is better) Translates to: ASSGSTPLETSS*LPECRATPTNM Trigger: CATGTTCGTAGGCGTCGCCCGGCACTCTGGGAGCCAGGATGAAGTCTCAAGGGGAGTAGAGCCGCTGGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS GCA 72 bp | TCTACTCCCCTTGAGACTTCATCCTGGCTCCCAGAGTaGCGGGCGACGCCTACGAACATGGCTCACCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: STPLETSSWLPE*RATPTNMAHPG Trigger: CCCAGGGTGAGCCATGTTCGTAGGCGTCGCCCGGCACTCTGGGAGCCAGGATGAAGTCTCAAGGGGAGTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 ENST00000513675.1 |
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| CDS TCA 72 bp | AGCAGCGAATGTTATTGCAACACTCACAGCAGGTGCTaGCTAAGCAGCCCAAACCACAGGGCTGCTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SSECYCNTHSRC*LSSPNHRAAPN Trigger: GTTTGGAGCAGCCCTGTGGTTTGGGCTGCTTAGTCAGCACCTGCTGTGAGTGTTGCAATAACATTCGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000505407.1 ENST00000506729.6 ENST00000513675.1 ENST00000514551.5 |
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| CDS TCA 72 bp | GGTTTCCCAACTTCCCTGTTCCATCATAATCTTCATTaGTCCCAGCAAATTGCACTGGATTACAGCGTACAA | + |
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Preference number: 6 (lower is better) Translates to: GFPTSLFHHNLH*SQQIALDYSVQ Trigger: TTGTACGCTGTAATCCAGTGCAATTTGCTGGGATCAATGAAGATTATGATGGAACAGGGAAGTTGGGAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS CAA 90 bp | TCCCAACTTCCCTGTTCCATCATAATCTTCATTGATCCCAGCAAATaGCACTGGATTACAGCGTACAAAAATAATAAACACAAGCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: SQLPCSIIIFIDPSK*HWITAYKNNKHKQY Trigger: ATACTGCTTGTGTTTATTATTTTTGTACGCTGTAATCCAGTGCAATTTGCTGGGATCAATGAAGATTATGATGGAACAGGGAAGTTGGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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| CDS TCA 72 bp | TCCATAGAATGCTATAAATATTGCTACCAGGCCAGATaGAATATCGTAACTCTTTTCCAATGCCAACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SIECYKYCYQAR*NIVTLFQCQLL Trigger: GAGAAGTTGGCATTGGAAAAGAGTTACGATATTTCATCTGGCCTGGTAGCAATATTTATAGCATTCTATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000505407.1 ENST00000506729.6 ENST00000513675.1 |
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| CDS CAA 90 bp | AGCACTGGATTCTTCATCAGAATCCAAAGAGCAGCACATAAATCCTaGATATTAGTTCCAAGTTTCAGATCTTTAAGTCTGCTGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: STGFFIRIQRAAHKS*ILVPSFRSLSLLSK Trigger: TTTTGACAGCAGACTTAAAGATCTGAAACTTGGAACTAATATCAAGGATTTATGTGCTGCTCTTTGGATTCTGATGAAGAATCCAGTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000505739.1 ENST00000506729.6 ENST00000514551.5 |
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| CDS CCA 72 bp | TCCATCATAATCTTCATTGATCCCAGCAAATTGCACTaGATTACAGCGTACAAAAATAATAAACACAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SIIIFIDPSKLH*ITAYKNNKHKQ Trigger: CTGCTTGTGTTTATTATTTTTGTACGCTGTAATCCAGTGCAATTTGCTGGGATCAATGAAGATTATGATGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000379807.7 ENST00000389019.7 ENST00000506729.6 |
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