RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLCO5A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137571

Ensembl transcript IDs: ENST00000260126.9, ENST00000524703.1, ENST00000524945.5, ENST00000526750.1, ENST00000528658.1, ENST00000530307.1, ENST00000531422.1, ENST00000532388.5

Found 712 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTaGTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAA +
Preference number: 1 (lower is better)
Translates to: RRGTYCFWEGPRVGL*CALDPFLQASLFVE
Trigger: TTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR CCA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTaGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCGG +
Preference number: 1 (lower is better)
Translates to: VCAAHWIPFCRPVSS*NSPWVLKAGQDLVR
Trigger: CCGGACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR GCA 90 bp AGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTaGGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTC +
Preference number: 1 (lower is better)
Translates to: RGTYCFWEGPRVGLC*ALDPFLQASLFVEF
Trigger: GAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR GCA 90 bp GGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTCTCTaGCTCCGCCTCTGCAGTCCATCCTCCTTGTATTTTATGGAGTAC +
Preference number: 1 (lower is better)
Translates to: GCPTLSLTVLRGNSL*LRLCSPSSLYFMEY
Trigger: GTACTCCATAAAATACAAGGAGGATGGACTGCAGAGGCGGAGGCAGAGAGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR CCA 90 bp CTTGACAATAACCACACGGAGCTGACTTCGCTGTCCCACGGTGGGTaGAGTGATCACTTGGCGACTTTGGACACAGGTGCATTCTGTATA +
Preference number: 1 (lower is better)
Translates to: LDNNHTELTSLSHGG*SDHLATLDTGAFCI
Trigger: TATACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGGGACAGCGAAGTCAGCTCCGTGTGGTTATTGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR TCA 90 bp ACACCTGAAGATACCTGGCACCTGATCAGTGATCGCCAAACTGGATaGCTGTTCATGGCAGCAAAGGGAGTAAGGGGGCTCTCTAACTAC +
Preference number: 1 (lower is better)
Translates to: TPEDTWHLISDRQTG*LFMAAKGVRGLSNY
Trigger: GTAGTTAGAGAGCCCCCTTACTCCCTTTGCTGCCATGAACAGTCATCCAGTTTGGCGATCACTGATCAGGTGCCAGGTATCTTCAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp TACACGATCACAAAATATAATTGGCTACCACCCGAGGCTTGGGCTTaGCTCCTGCTCCTGGGTGCACTAGGGAATTCCCATCAATGCTTC +
Preference number: 1 (lower is better)
Translates to: YTITKYNWLPPEAWA*LLLLGALGNSHQCF
Trigger: GAAGCATTGATGGGAATTCCCTAGTGCACCCAGGAGCAGGAGGCAAGCCCAAGCCTCGGGTGGTAGCCAATTATATTTTGTGATCGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp TACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTaGACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTGTCAATG +
Preference number: 1 (lower is better)
Translates to: YTKRNDVTLYSQQEP*TPHSCCQSMQVVSM
Trigger: CATTGACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR GCA 90 bp TGGGCTTGCCTCCTGCTCCTGGGTGCACTAGGGAATTCCCATCAATaGTTCAGCTCCATCCAAACTCTAAAGTTTCTCTTTGGTACATGC +
Preference number: 1 (lower is better)
Translates to: WACLLLLGALGNSHQ*FSSIQTLKFLFGTC
Trigger: GCATGTACCAAAGAGAAACTTTAGAGTTTGGATGGAGCTGAAGCATTGATGGGAATTCCCTAGTGCACCCAGGAGCAGGAGGCAAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 90 bp TTCTGGCTCCAAGTGCACCAAAGAGCGCAAGCTGGAATTGTGGACTaGAGAAGAATTTTCTTGGTGGTTGGTGAACATGGAGGACCACCA +
Preference number: 1 (lower is better)
Translates to: FWLQVHQRAQAGIVD*RRIFLVVGEHGGPP
Trigger: TGGTGGTCCTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTCTTTGGTGCACTTGGAGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 90 bp ACCATAGGCTCCTTGGCAGAAAAAGTTCACAATTATATCAGCATTTaGCCCTTACACTCCCTGGCAGCCAGAACCCCTGAGCTAACTTGC +
Preference number: 1 (lower is better)
Translates to: TIGSLAEKVHNYISI*PLHSLAARTPELTC
Trigger: GCAAGTTAGCTCAGGGGTTCTGGCTGCCAGGGAGTGTAAGGGCCAAATGCTGATATAATTGTGAACTTTTTCTGCCAAGGAGCCTATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 90 bp CCACCTGTGCAGTCAAGCAAGGTTGGAGAGCAGAAGCCTGAATCATaGAACAGTCTGTCAATCACATCTCTTCTGGGGATAAGGGTAAAC +
Preference number: 1 (lower is better)
Translates to: PPVQSSKVGEQKPES*NSLSITSLLGIRVN
Trigger: GTTTACCCTTATCCCCAGAAGAGATGTGATTGACAGACTGTTCCATGATTCAGGCTTCTGCTCTCCAACCTTGCTTGACTGCACAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 90 bp GCAAGCTGGAATTGTGGACTGAAGAAGAATTTTCTTGGTGGTTGGTaGACATGGAGGACCACCATGACATCCATGAGGCCTTACTCCATG +
Preference number: 1 (lower is better)
Translates to: ASWNCGLKKNFLGGW*TWRTTMTSMRPYSM
Trigger: CATGGAGTAAGGCCTCATGGATGTCATGGTGGTCCTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp AGGGAAACAGCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTaGAGTCAAGCAAGGTTGGAGAGCAGAAGCCTGAATCATGGAACA +
Preference number: 1 (lower is better)
Translates to: RETALYPGVFAQFHL*SQARLESRSLNHGT
Trigger: TGTTCCATGATTCAGGCTTCTGCTCTCCAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGCTGTTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp TCATTCCTAGGAAGAGAGGGAAACAGCCTTATACCCAGGAGTATTTaGACAATTCCACCTGTGCAGTCAAGCAAGGTTGGAGAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: SFLGREGNSLIPRSI*TIPPVQSSKVGEQK
Trigger: CTTCTGCTCTCCAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGCTGTTTCCCTCTCTTCCTAGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp CACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTGTCAATGACTaGTCCAAAGTAGATTGGAGTAGGAATGTATGCAAGTGTTCGCAA +
Preference number: 1 (lower is better)
Translates to: HTTFLLPEHAGGVND*SKVDWSRNVCKCSQ
Trigger: TTGCGAACACTTGCATACATTCCTACTCCAATCTACTTTGGAGCAGTCATTGACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CCA 90 bp ACACTTTCTGGCTCCAAGTGCACCAAAGAGCGCAAGCTGGAATTGTaGACTGAAGAAGAATTTTCTTGGTGGTTGGTGAACATGGAGGAC +
Preference number: 1 (lower is better)
Translates to: TLSGSKCTKERKLEL*TEEEFSWWLVNMED
Trigger: GTCCTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTCTTTGGTGCACTTGGAGCCAGAAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 90 bp GTCATCTCTGATGTTTTAAGTACATACACGATCACAAAATATAATTaGCTACCACCCGAGGCTTGGGCTTGCCTCCTGCTCCTGGGTGCA +
Preference number: 1 (lower is better)
Translates to: VISDVLSTYTITKYN*LPPEAWACLLLLGA
Trigger: TGCACCCAGGAGCAGGAGGCAAGCCCAAGCCTCGGGTGGTAGCCAATTATATTTTGTGATCGTGTATGTACTTAAAACATCAGAGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 90 bp ATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTATTATaGAAGAGAAAACACAAATGTGTGGAAAGGCTACCTACTGGTCTG +
Preference number: 1 (lower is better)
Translates to: MRQLPLPASRSTLLL*KRKHKCVERLPTGL
Trigger: CAGACCAGTAGGTAGCCTTTCCACACATTTGTGTTTTCTCTTCCATAATAAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 90 bp AAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGT +
Preference number: 1 (lower is better)
Translates to: KRGKALSLVEVSSPQ*IAAVYTEFCWFEDC
Trigger: ACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTATTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
3UTR CCA 90 bp AAAGAGCGCAAGCTGGAATTGTGGACTGAAGAAGAATTTTCTTGGTaGTTGGTGAACATGGAGGACCACCATGACATCCATGAGGCCTTA +
Preference number: 1 (lower is better)
Translates to: KERKLELWTEEEFSW*LVNMEDHHDIHEAL
Trigger: TAAGGCCTCATGGATGTCATGGTGGTCCTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp TTACTCCATGTAACTCCCCCTTCTCTGAAGGCTGACATTTCCAAGTaGATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACA +
Preference number: 1 (lower is better)
Translates to: LLHVTPPSLKADISK*MPLKVTMSQRLKGT
Trigger: TGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAAATGTCAGCCTTCAGAGAAGGGGGAGTTACATGGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp CAATGCTTCAGCTCCATCCAAACTCTAAAGTTTCTCTTTGGTACATaGACGGTTTCTACAAAACAGGGCCAAAAAGACACTTTCTGGCTC +
Preference number: 1 (lower is better)
Translates to: QCFSSIQTLKFLFGT*TVSTKQGQKDTFWL
Trigger: GAGCCAGAAAGTGTCTTTTTGGCCCTGTTTTGTAGAAACCGTGCATGTACCAAAGAGAAACTTTAGAGTTTGGATGGAGCTGAAGCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp AGGAATGTATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTaGAAAAGGTCTCTCCTCATCTTCTACGGACCTGAGTGTTACTAT +
Preference number: 1 (lower is better)
Translates to: RNVCKCSQQNKLHSQ*KRSLLIFYGPECYY
Trigger: ATAGTAACACTCAGGTCCGTAGAAGATGAGGAGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATACATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR TCA 90 bp AAGTACAATATTAACACTGTGGTGCACATTTCAGGCCCATTTCTTTaGGTTCTGGCCCAATCATCCCAAAGGATTTTATGGAGTGGCAGA +
Preference number: 1 (lower is better)
Translates to: KYNINTVVHISGPFL*VLAQSSQRILWSGR
Trigger: TCTGCCACTCCATAAAATCCTTTGGGATGATTGGGCCAGAACTCAAAGAAATGGGCCTGAAATGTGCACCACAGTGTTAATATTGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 90 bp TCCTCATCTTCTACGGACCTGAGTGTTACTATGATAGCTGATGGTTaGGCACATGCTGTGATGAAGGTGACTATGAAAAGAAAAACTAAG +
Preference number: 1 (lower is better)
Translates to: SSSSTDLSVTMIADG*AHAVMKVTMKRKTK
Trigger: CTTAGTTTTTCTTTTCATAGTCACCTTCATCACAGCATGTGCCCAACCATCAGCTATCATAGTAACACTCAGGTCCGTAGAAGATGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR GCA 90 bp AGCCATGTAGAAAGCATTCTCTATGATGCTTACTTCAAAGTGATGTaGTGGGAGGTACTGAAAAGAATGATGGGTAATGAACCCAAAGTG +
Preference number: 1 (lower is better)
Translates to: SHVESILYDAYFKVM*WEVLKRMMGNEPKV
Trigger: CACTTTGGGTTCATTACCCATCATTCTTTTCAGTACCTCCCAGCACATCACTTTGAAGTAAGCATCATAGAGAATGCTTTCTACATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 90 bp TTCCCATCAATGCTTCAGCTCCATCCAAACTCTAAAGTTTCTCTTTaGTACATGCACGGTTTCTACAAAACAGGGCCAAAAAGACACTTT +
Preference number: 1 (lower is better)
Translates to: FPSMLQLHPNSKVSL*YMHGFYKTGPKRHF
Trigger: AAAGTGTCTTTTTGGCCCTGTTTTGTAGAAACCGTGCATGTACCAAAGAGAAACTTTAGAGTTTGGATGGAGCTGAAGCATTGATGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 90 bp ATTAACACAGCCAGCCAGACAAGGGTTAAAGTATGTAATTCCATCTaGTCCACAGACTGGCTCATACTCGTGTATTTTACAACCACAATT +
Preference number: 1 (lower is better)
Translates to: INTASQTRVKVCNSI*STDWLILVYFTTTI
Trigger: AATTGTGGTTGTAAAATACACGAGTATGAGCCAGTCTGTGGATCAGATGGAATTACATACTTTAACCCTTGTCTGGCTGGCTGTGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CCA 90 bp CATGTAGAAAGCATTCTCTATGATGCTTACTTCAAAGTGATGTGCTaGGAGGTACTGAAAAGAATGATGGGTAATGAACCCAAAGTGCAT +
Preference number: 1 (lower is better)
Translates to: HVESILYDAYFKVMC*EVLKRMMGNEPKVH
Trigger: ATGCACTTTGGGTTCATTACCCATCATTCTTTTCAGTACCTCCCAGCACATCACTTTGAAGTAAGCATCATAGAGAATGCTTTCTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 90 bp ATATTCTGTTCCAGAACACAGATCTCCCTCCTCCTGTATTCTAAGTaGTTTTCATATCCCAGGCACAGATTTCCTGATATAAGTATGCAT +
Preference number: 1 (lower is better)
Translates to: IFCSRTQISLLLYSK*FSYPRHRFPDISMH
Trigger: ATGCATACTTATATCAGGAAATCTGTGCCTGGGATATGAAAATCACTTAGAATACAGGAGGAGGGAGATCTGTGTTCTGGAACAGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp GCTTGTTTTCTGGAAAATTCTTCAGATTTCCAAACACAAAGTACATaGAGCCACTTAGCAGTGAAATACTGTGAATTCAGTGGCGCTTTT +
Preference number: 1 (lower is better)
Translates to: ACFLENSSDFQTQST*SHLAVKYCEFSGAF
Trigger: AAAAGCGCCACTGAATTCACAGTATTTCACTGCTAAGTGGCTGCATGTACTTTGTGTTTGGAAATCTGAAGAATTTTCCAGAAAACAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 90 bp CCTTACAAAAGAATACTGGAGTTTATATTTAAGCTATCAGATTTATaGTTCAGCAGCCTCTTTATCTTAGGATGGGGCAGGCAGACTGAA +
Preference number: 1 (lower is better)
Translates to: PYKRILEFIFKLSDL*FSSLFILGWGRQTE
Trigger: TTCAGTCTGCCTGCCCCATCCTAAGATAAAGAGGCTGCTGAATCATAAATCTGATAGCTTAAATATAAACTCCAGTATTCTTTTGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 90 bp TATGGTTCCTCTGAAGCATTTGAAAAACTCTACCTGATTTATAACTaGTATGGCTTAAAATGCTATCAACAGTACTGGATGGAAAGTTCA +
Preference number: 1 (lower is better)
Translates to: YGSSEAFEKLYLIYN*YGLKCYQQYWMESS
Trigger: TGAACTTTCCATCCAGTACTGTTGATAGCATTTTAAGCCATAGCAGTTATAAATCAGGTAGAGTTTTTCAAATGCTTCAGAGGAACCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 90 bp TACCTGATTTATAACTGCTATGGCTTAAAATGCTATCAACAGTACTaGATGGAAAGTTCAGCTTCCTCTTTTCAGAAACATATCTGCTTT +
Preference number: 1 (lower is better)
Translates to: YLIYNCYGLKCYQQY*MESSASSFQKHICF
Trigger: AAAGCAGATATGTTTCTGAAAAGAGGAAGCTGAACTTTCCATCCAGTACTGTTGATAGCATTTTAAGCCATAGCAGTTATAAATCAGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CCA 90 bp AACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCCTGTCCCACGGTGGGTaGAGTGATCACTTGGCGACT +
Preference number: 2 (lower is better)
Translates to: NLLLLGRAPGRSVLRTGSLSHGG*SDHLAT
Trigger: AGTCGCCAAGTGATCACTCCACCCACCGTGGGACAG...GGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR GCA 90 bp GCTGAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCCTCTGCCTCCGCCTCTaGAGTCCATCCTCCTTGTAT +
Preference number: 2 (lower is better)
Translates to: AESWARSSPGIVGVSHSLLCLRL*SPSSLY
Trigger: ATACAAGGAGGATGGACTGCAGAGGCGGAGGCAGAG...GAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR CAA 90 bp AATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCGGGCATaGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAAT +
Preference number: 2 (lower is better)
Translates to: NSPWVLKAGQDLVRA*SGCPTLSLTVLRGN
Trigger: ATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR TCA 90 bp TCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTGGCTCTCAGTCTTGTTaGGGTATCCAGCCCTCAATG +
Preference number: 2 (lower is better)
Translates to: SGHCRGVPLSHSRCSGEIGSQSC*GIQPSM
Trigger: CATTGAGGGCTGGATACCTCAACAAGACTGAGAGCC...AATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR GCA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTTCCCAGCAAGAACCCTaGACACCACATTCCTGTTGC +
Preference number: 2 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGSQQEP*TPHSCC
Trigger: GCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGA...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR GCA 90 bp TGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCCTTTTTGCTCTCTCACTCACGGTaGTCAGGGGAAATTCTCTCT +
Preference number: 2 (lower is better)
Translates to: CFWEGPRVGLCCALDPFLLSHSR*SGEILS
Trigger: AGAGAGAATTTCCCCTGAGCACCGTGAGTGAGAGAG...CAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR TCA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCACGGTGGGTGGAGTaGTCACTTGGCGACTTTGGA +
Preference number: 2 (lower is better)
Translates to: ASLFVEFSLGAESWARSSPRWVE*SLGDFG
Trigger: TCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGG...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR CCA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTGGTGGAGTGATCACTTaGCGACTTTGGACACAGGTG +
Preference number: 2 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTGGVIT*RLWTQV
Trigger: CACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACC...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CAA 90 bp CACACGGAGCTGACTTCGCTGTCCCACGGTGGGTGGAGTGATCACTaGGCGACTTTGGACACAGGTGCATTCTGTATAATTCCGTATCCC +
Preference number: 2 (lower is better)
Translates to: HTELTSLSHGGWSDH*ATLDTGAFCIIPYP
Trigger: GGGATACGGAATTATACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGGGACAGCGAAGTCAGCTCCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR TCA 90 bp CAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACT +
Preference number: 2 (lower is better)
Translates to: QDLVRALSGCPTLSLTVLVSSPQ*IAAVYT
Trigger: AGTATACACAGCCGCTATTCATTGAGGGCTGGATAC...GAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR TCA 90 bp AACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCGGGAACAAATCTAGCTaGACGTCTCCTTCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: NLLLLGRAPGRSVLRTGSGNKSS*TSPSWR
Trigger: TCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCC...GGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR GCA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCACACCACATTCCTGTTaGCAGAGCATGCAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVATPHSC*QSMQVV
Trigger: CACCACCTGCATGCTCTGGCAACAGGAATGTGGTGT...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACTCTGCCTCCGCCTCTaGAGTCCATCCTCCTTGTAT +
Preference number: 2 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQLCLRL*SPSSLY
Trigger: ATACAAGGAGGATGGACTGCAGAGGCGGAGGCAGAG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR GCA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTAGGGGAAATTCTCTCTaGCTCCGCCTCTGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: ASLFVEFSLGAESWARSSRGNSL*LRLCSP
Trigger: TGGACTGCAGAGGCGGAGGCAGAGAGAATTTCCCCT...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CCA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTGTCTGTGCTGCGCACTaGATCCCTTTTTGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: ASLFVEFSLGAESWARSSVCAAH*IPFCRP
Trigger: TGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR TCA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCAGTATGTAATTCCATCTaGTCCACAGACTGGCTCATA +
Preference number: 2 (lower is better)
Translates to: RRGTYCFWEGPRVGLCCAVCNSI*STDWLI
Trigger: TATGAGCCAGTCTGTGGATCAGATGGAATTACATAC...TGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CAA 90 bp AGGCCGGCAGCCAAACCAAAATACACAAAACGAAACGACGTCACGTaGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: RPAAKPKYTKRNDVT*YSQQEPCTPHSCCQ
Trigger: CTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGCTGCCGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR CAA 90 bp CTGACTTCGCTGTCCCACGGTGGGTGGAGTGATCACTTGGCGACTTaGGACACAGGTGCATTCTGTATAATTCCGTATCCCAGTGCTAAG +
Preference number: 2 (lower is better)
Translates to: LTSLSHGGWSDHLAT*DTGAFCIIPYPSAK
Trigger: CTTAGCACTGGGATACGGAATTATACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGGGACAGCGAAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CAA 90 bp CGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTaGCCAGAGCATGCAGGTGGTGTCAATGACTGCTCCAAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: RHVVLPARTLHTTFL*PEHAGGVNDCSKVD
Trigger: ATCTACTTTGGAGCAGTCATTGACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR GCA 90 bp AAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCCCGGGTAGGTCTGTaGTGCGCACTGGATCCCTTT +
Preference number: 2 (lower is better)
Translates to: KYTKRNDVTLYSQQEPCTPRVGL*CALDPF
Trigger: AAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGG...TGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR TCA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTCTGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACT +
Preference number: 2 (lower is better)
Translates to: VCAAHWIPFCRPVSSWNSVSSPQ*IAAVYT
Trigger: AGTATACACAGCCGCTATTCATTGAGGGCTGGATAC...AGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CCA 90 bp GCTGAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCCCTCCTTGTATTTTATaGAGTACCAGGCCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: AESWARSSPGIVGVSHSLPPCIL*STRPEK
Trigger: TTTTTCTGGCCTGGTACTCCATAAAATACAAGGAGG...GAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR GCA 90 bp GGAATGTATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCCCCGGGTAGGTCTGTaGTGCGCACTGGATCCCTTT +
Preference number: 2 (lower is better)
Translates to: GMYASVRNKTNCIPSAKGPRVGL*CALDPF
Trigger: AAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGG...ACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR CCA 90 bp CCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTGTCCTCCTTGTATTTTATaGAGTACCAGGCCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: PSKNPAHHIPVARACRWCPPCIL*STRPEK
Trigger: TTTTTCTGGCCTGGTACTCCATAAAATACAAGGAGG...ACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CAA 90 bp GAGCGCAAGCTGGAATTGTGGACTGAAGAAGAATTTTCTTGGTGGTaGGTGAACATGGAGGACCACCATGACATCCATGAGGCCTTACTC +
Preference number: 2 (lower is better)
Translates to: ERKLELWTEEEFSWW*VNMEDHHDIHEALL
Trigger: GAGTAAGGCCTCATGGATGTCATGGTGGTCCTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAATGTTACTATGATAGCTaGTGGTTGGGCACATGCTGT +
Preference number: 2 (lower is better)
Translates to: ERSGERLSVLLRYPALNECYYDS*WLGTCC
Trigger: ACAGCATGTGCCCAACCATCAGCTATCATAGTAACA...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR GCA 90 bp CAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACTGGATCCCTTTTTaGAGGCCAGTCTCTTCGTGG +
Preference number: 2 (lower is better)
Translates to: QNTQNETTSRCTPSKNPAHWIPF*RPVSSW
Trigger: CCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTG...TGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR GCA 90 bp TGTATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCTCTCGCAGAGGAACTTATTaGTTCTGGGAAGGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: CMQVFATKQTAFPVQKVSRRGTY*FWEGPR
Trigger: CCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG...AGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR CCA 90 bp TATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCTCTCCGGAACTTATTGCTTCTaGGAAGGGCCCCGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: YASVRNKTNCIPSAKGLSGTYCF*EGPRVG
Trigger: ACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCC...GGAGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CAA 90 bp GTCATTCCTAGGAAGAGAGGGAAACAGCCTTATACCCAGGAGTATTaGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGGAGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: VIPRKRGKQPYTQEY*HNSTCAVKQGWRAE
Trigger: TTCTGCTCTCCAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGCTGTTTCCCTCTCTTCCTAGGAATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR TCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATTGGGACTTTTCCCAGTaGCTTTGTGGGCCCGTAGAG +
Preference number: 2 (lower is better)
Translates to: FQVHATKGNNVTATKGNNWDFSQ*LCGPVE
Trigger: CTCTACGGGCCCACAAAGTCACTGGGAAAAGTCCCA...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR TCA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATCAGGCACAGATTTCCTaGTATAAGTATGCATTTTCA +
Preference number: 2 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHQAQIS*YKYAFS
Trigger: TGAAAATGCATACTTATATCAGGAAATCTGTGCCTG...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR GCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAGGGGAAATTCTCTCTaGCTCCGCCTCTGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: INTTEMGTNLAERLLLGERGNSL*LRLCSP
Trigger: TGGACTGCAGAGGCGGAGGCAGAGAGAATTTCCCCT...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACTAAAAACTTTGATTTaGAAATGCCAAGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQLKTLI*KCQVLG
Trigger: GCCCAGGACTTGGCATTTCCAAATCAAAGTTTTTAG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
3UTR CAA 90 bp TACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTaGGAGAGCAGAAGCCTGAATCATGGAACAGTCTGTCAATCACAT +
Preference number: 2 (lower is better)
Translates to: YPGVFAQFHLCSQAR*ESRSLNHGTVCQSH
Trigger: ATGTGATTGACAGACTGTTCCATGATTCAGGCTTCTGCTCTCCAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CAA 90 bp AAGACACTTTCTGGCTCCAAGTGCACCAAAGAGCGCAAGCTGGAATaGTGGACTGAAGAAGAATTTTCTTGGTGGTTGGTGAACATGGAG +
Preference number: 2 (lower is better)
Translates to: KTLSGSKCTKERKLE*WTEEEFSWWLVNME
Trigger: CTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTCTTTGGTGCACTTGGAGCCAGAAAGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR TCA 90 bp GCAGCCAAACCAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGGGAACAAATCTAGCTaGACGTCTCCTTCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: AAKPKYTKRNDVTLYSQQGNKSS*TSPSWR
Trigger: TCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCC...TTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAAAAACCACACAGATTTaGCAGTGCTTTCAAGATGTA +
Preference number: 2 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQKTTQI*QCFQDV
Trigger: TACATCTTGAAAGCACTGGCAAATCTGTGTGGTTTT...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR GCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGCACTGGATCCCTTTTTaGAGGCCAGTCTCTTCGTGG +
Preference number: 2 (lower is better)
Translates to: INTTEMGTNLAERLLLGEHWIPF*RPVSSW
Trigger: CCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTG...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGCTCTTTATCTTAGGATaGGGCAGGCAGACTGAAAGA +
Preference number: 2 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLLFILG*GRQTER
Trigger: TCTTTCAGTCTGCCTGCCCCATCCTAAGATAAAGAG...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR GCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTAATACTTCCAATATATaGCACATTGGCCAGAGTCTG +
Preference number: 2 (lower is better)
Translates to: KDKVHEATTFACQPQHSLNTSNI*HIGQSL
Trigger: CAGACTCTGGCCAATGTGGCATATATTGGAAGTATT...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR TCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACT +
Preference number: 2 (lower is better)
Translates to: FQVHATKGNNVTATKGNNVSSPQ*IAAVYT
Trigger: AGTATACACAGCCGCTATTCATTGAGGGCTGGATAC...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR GCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTTGCTATGGCTTAAAATaGTATCAACAGTACTGGATG +
Preference number: 2 (lower is better)
Translates to: KDKVHEATTFACQPQHSLCYGLK*YQQYWM
Trigger: CATCCAGTACTGTTGATAGCATTTTAAGCCATAGCA...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGTTCAAAGTGATGTGCTaGGAGGTACTGAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLFKVMC*EVLKRM
Trigger: CATTCTTTTCAGTACCTCCCAGCACATCACTTTGAA...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR TCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGGGCTCTCAGTCTTGTTaGGGTATCCAGCCCTCAATG +
Preference number: 2 (lower is better)
Translates to: RKSANPTKILSMQYLNDQGSQSC*GIQPSM
Trigger: CATTGAGGGCTGGATACCTCAACAAGACTGAGAGCC...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGGGAACAAATCTAGCTaGACGTCTCCTTCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKGNKSS*TSPSWR
Trigger: TCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CCA 90 bp AGCTGTTCCTTCTATCACACTATGCCTATGGTTCCTCTGAAGCATTTGAAAAACGGAAATGCCAAGTCCTaGGCAAGCTCACCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: SCSFYHTMPMVPLKHLKNGNAKS*ASSPLF
Trigger: AAACAAAGGTGAGCTTGCCCAGGACTTGGCATTTCC...GTTTTTCAAATGCTTCAGAGGAACCATAGGCATAGTGTGATAGAAGGAACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR TCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATACCAAGAGAACTGTTTaGCCAATGTCATTCCTAGGA +
Preference number: 2 (lower is better)
Translates to: FQVHATKGNNVTATKGNNTKRTV*PMSFLG
Trigger: TCCTAGGAATGACATTGGTCAAACAGTTCTCTTGGT...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAAAACTGCATTCCCAGTaGAAAAGGTCTCTCCTCATC +
Preference number: 2 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKKLHSQ*KRSLLI
Trigger: GATGAGGAGAGACCTTTTGCACTGGGAATGCAGTTT...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR GCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAGACAAATTCATTTGTaGTTTGTAGCAGAACTCACA +
Preference number: 2 (lower is better)
Translates to: INTTEMGTNLAERLLLGERQIHL*FVAELT
Trigger: TGTGAGTTCTGCTACAAAGCACAAATGAATTTGTCT...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
3UTR-3UTR GCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACAGGGAATTCCCATCAATaGTTCAGCTCCATCCAAACT +
Preference number: 2 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTGNSHQ*FSSIQT
Trigger: AGTTTGGATGGAGCTGAAGCATTGATGGGAATTCCC...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGCAGAAGCCTGAATCATaGAACAGTCTGTCAATCACA +
Preference number: 2 (lower is better)
Translates to: RKSANPTKILSMQYLNDQQKPES*NSLSIT
Trigger: TGTGATTGACAGACTGTTCCATGATTCAGGCTTCTG...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR GCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGTACTTCAAAGTGATGTaGTGGGAGGTACTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: RKSANPTKILSMQYLNDQYFKVM*WEVLKR
Trigger: TCTTTTCAGTACCTCCCAGCACATCACTTTGAAGTA...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CAA 90 bp AACAACACATTAATGAAATACCTGCTATTTATAAGGAGCAGATACTaGAGGAAGTACAATATTAACACTGTGGTGCACATTTCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: NNTLMKYLLFIRSRY*RKYNINTVVHISGP
Trigger: TGGGCCTGAAATGTGCACCACAGTGTTAATATTGTACTTCCTCAAGTATCTGCTCCTTATAAATAGCAGGTATTTCATTAATGTGTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR GCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACACAAACACAAAGTACATaGAGCCACTTAGCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTQTQST*SHLAVK
Trigger: TTTCACTGCTAAGTGGCTGCATGTACTTTGTGTTTG...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR GCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGTTAACACAAACTGTATaGAACCAAGAGAACTGTTTG +
Preference number: 2 (lower is better)
Translates to: RKSANPTKILSMQYLNDQLTQTV*NQENCL
Trigger: CAAACAGTTCTCTTGGTTGCATACAGTTTGTGTTAA...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp TTCCAGCCCCGGGTCCGCAGAGGAACTTATTGCTTCTaGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTG +
Preference number: 3 (lower is better)
Translates to: FQPRVRRGTYCF*EGPRVGLCCAL
Trigger: CAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCGGACCCGGGGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp CTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCAAGGCTCTCAGTCTTGTaGAGGTATCCAGCCCTCAAT +
Preference number: 3 (lower is better)
Translates to: LQEGGSKAAGLSSSPGSARLSVL*RYPALN
Trigger: ATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCT...TGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp TTCAAGCTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGCTGAACGTCTCCTTCTaGGAGAGAAGCGGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: FKLQEGGSKAAGLSSSPGLNVSF*ERSGER
Trigger: CCTTTCCCCGCTTCTCTCCAAGAAGGAGACGTTCAG...CCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAGCTTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCAGATCTAGTCCGGGCATaGTCGGGGTGTCCCACTCTC +
Preference number: 3 (lower is better)
Translates to: RRGTYCFWEGPRVGLCCADLVRA*SGCPTL
Trigger: GAGAGTGGGACACCCCGACAATGCCCGGACTAGATC...TGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp TGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCCTTTTTGCCGCAGAGGAACTTATaGCTTCTGGGAAGGGCCCCG +
Preference number: 3 (lower is better)
Translates to: CFWEGPRVGLCCALDPFLPQRNL*LLGRAP
Trigger: CGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCGG...CAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTCACACCACATTCCTGTaGCCAGAGCATGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGHTTFL*PEHAGG
Trigger: ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTG...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp TCTTCCATTTTCAAGCTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCGGGTGGAGTGATCACTaGGCGACTTTGGACACAGGT +
Preference number: 3 (lower is better)
Translates to: SSIFKLQEGGSKAAGLSSGWSDH*ATLDTG
Trigger: ACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCC...GGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAGCTTGAAAATGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR TCA 72 bp CACGGAGCTGACTTCGCTGTCCCACGGTGGGTGGAGTaGTCACTTGGCGACTTTGGACACAGGTGCATTCTG +
Preference number: 3 (lower is better)
Translates to: HGADFAVPRWVE*SLGDFGHRCIL
Trigger: CAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGGGACAGCGAAGTCAGCTCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR GCA 72 bp TATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTaGGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: YCFWEGPRVGLC*ALDPFLQASLF
Trigger: GAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR GCA 72 bp ACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTaGTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTC +
Preference number: 3 (lower is better)
Translates to: TYCFWEGPRVGL*CALDPFLQASL
Trigger: GAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR CCA 72 bp AACCACACGGAGCTGACTTCGCTGTCCCACGGTGGGTaGAGTGATCACTTGGCGACTTTGGACACAGGTGCA +
Preference number: 3 (lower is better)
Translates to: NHTELTSLSHGG*SDHLATLDTGA
Trigger: TGCACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGGGACAGCGAAGTCAGCTCCGTGTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR CAA 90 bp GCTGAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCGAAAGGCTCTCAGTCTaGTTGAGGTATCCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: AESWARSSPGIVGVSHSLERLSV*LRYPAL
Trigger: GAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTC...GAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp TGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCCTTTTTGATAAACCCAACGAATTaGAGGCCGGCAGCCAAACCA +
Preference number: 3 (lower is better)
Translates to: CFWEGPRVGLCCALDPFLINPTN*RPAAKP
Trigger: TGGTTTGGCTGCCGGCCTCAAATTCGTTGGGTTTAT...CAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTGATCTAGTCCGGGCATaGTCGGGGTGTCCCACTCTC +
Preference number: 3 (lower is better)
Translates to: ASLFVEFSLGAESWARSSDLVRA*SGCPTL
Trigger: GAGAGTGGGACACCCCGACAATGCCCGGACTAGATC...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR CCA 72 bp AGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTaGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: SLFVEFSLGAES*ARSSPGIVGVS
Trigger: GGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCGCACTGGATCCCTTTTaGCAGGCCAGTCTCTTCGTG +
Preference number: 3 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVAALDPF*QASLFV
Trigger: CACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGC...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR GCA 72 bp CGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTaGACACCACATTCCTGTTGCCAGAGCATGCAGGTG +
Preference number: 3 (lower is better)
Translates to: RNDVTLYSQQEP*TPHSCCQSMQV
Trigger: CACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCACACCACATTCCTGTaGCCAGAGCATGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: ASLFVEFSLGAESWARSSHTTFL*PEHAGG
Trigger: ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTG...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGCACTGGATCCCTTTTaGCAGGCCAGTCTCTTCGTG +
Preference number: 3 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQALDPF*QASLFV
Trigger: CACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR TCA 72 bp GATACCTGGCACCTGATCAGTGATCGCCAAACTGGATaGCTGTTCATGGCAGCAAAGGGAGTAAGGGGGCTC +
Preference number: 3 (lower is better)
Translates to: DTWHLISDRQTG*LFMAAKGVRGL
Trigger: GAGCCCCCTTACTCCCTTTGCTGCCATGAACAGTCATCCAGTTTGGCGATCACTGATCAGGTGCCAGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp TACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTaGCAGAGCATGCAGGTGGTGTCAATGACTGCTCCA +
Preference number: 3 (lower is better)
Translates to: YSQQEPCTPHSC*QSMQVVSMTAP
Trigger: TGGAGCAGTCATTGACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR CAA 90 bp CCTCCGCCTCTGCAGTCCATCCTCCTTGTATTTTATGGAGTACCAGGCCAGAAACGAAACGACGTCACGTaGTACTCCCAGCAAGAACCC +
Preference number: 3 (lower is better)
Translates to: PPPLQSILLVFYGVPGQKRNDVT*YSQQEP
Trigger: GGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG...TTTCTGGCCTGGTACTCCATAAAATACAAGGAGGATGGACTGCAGAGGCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR GCA 72 bp ACAAAATATAATTGGCTACCACCCGAGGCTTGGGCTTaGCTCCTGCTCCTGGGTGCACTAGGGAATTCCCAT +
Preference number: 3 (lower is better)
Translates to: TKYNWLPPEAWA*LLLLGALGNSH
Trigger: ATGGGAATTCCCTAGTGCACCCAGGAGCAGGAGGCAAGCCCAAGCCTCGGGTGGTAGCCAATTATATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAGAAAGGCTCTCAGTCTaGTTGAGGTATCCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: ERSGERLSVLLRYPALNEERLSV*LRYPAL
Trigger: GAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTC...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
3UTR-3UTR CAA 90 bp GAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTGTCAATGACTGATCACTTGGCGACTTaGGACACAGGTGCATTCTGT +
Preference number: 3 (lower is better)
Translates to: EPCTPHSCCQSMQVVSMTDHLAT*DTGAFC
Trigger: ACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATC...AGTCATTGACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR CAA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTGAAAAGAAGGCACAGTaGTTTCTCAAGTCGCCATTT +
Preference number: 3 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTEKKAQ*FLKSPF
Trigger: AAATGGCGACTTGAGAAACAACTGTGCCTTCTTTTC...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCCTGAACGTCTCCTTCTaGGAGAGAAGCGGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLLNVSF*ERSGER
Trigger: CCTTTCCCCGCTTCTCTCCAAGAAGGAGACGTTCAG...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
3UTR-3UTR CAA 90 bp AGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGAATGGGATAAGAGTATaGCAGGTCCGTTTACATTTC +
Preference number: 3 (lower is better)
Translates to: RGTYCFWEGPRVGLCCALNGIRV*QVRLHF
Trigger: GAAATGTAAACGGACCTGCAATACTCTTATCCCATT...CAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR TCA 72 bp TCTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTaGGGTATCCAGCCCTCAATGAATAGCGGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: SWREAGKGSQSC*GIQPSMNSGCV
Trigger: TACACAGCCGCTATTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
3UTR-3UTR CAA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATGAAAAGAAGGCACAGTaGTTTCTCAAGTCGCCATTT +
Preference number: 3 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHEKKAQ*FLKSPF
Trigger: AAATGGCGACTTGAGAAACAACTGTGCCTTCTTTTC...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CAA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCGAAAGGCTCTCAGTCTaGTTGAGGTATCCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLERLSV*LRYPAL
Trigger: GAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTC...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
3UTR-3UTR CAA 90 bp CAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACGAAACGACGTCACGTaGTACTCCCAGCAAGAACCC +
Preference number: 3 (lower is better)
Translates to: QNTQNETTSRCTPSKNPARNDVT*YSQQEP
Trigger: GGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG...TGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR GCA 72 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTaGAGTCAAGCAAGGTTGGAGAGCAGAAGCCTGAAT +
Preference number: 3 (lower is better)
Translates to: ALYPGVFAQFHL*SQARLESRSLN
Trigger: ATTCAGGCTTCTGCTCTCCAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp GGAAGAGAGGGAAACAGCCTTATACCCAGGAGTATTTaGACAATTCCACCTGTGCAGTCAAGCAAGGTTGGA +
Preference number: 3 (lower is better)
Translates to: GREGNSLIPRSI*TIPPVQSSKVG
Trigger: TCCAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGCTGTTTCCCTCTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp GGCTCCAAGTGCACCAAAGAGCGCAAGCTGGAATTGTaGACTGAAGAAGAATTTTCTTGGTGGTTGGTGAAC +
Preference number: 3 (lower is better)
Translates to: GSKCTKERKLEL*TEEEFSWWLVN
Trigger: GTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTCTTTGGTGCACTTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CAA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATTCTGCAACAATTTTCTaGGATGAGAAAGCTGTCATT +
Preference number: 3 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHSATIF*DEKAVI
Trigger: AATGACAGCTTTCTCATCCAAGAAAATTGTTGCAGA...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAACCCCTTCCCATGGTTTaGCTAACCGTGTACCTCAGC +
Preference number: 3 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKPLPMV*LTVYLS
Trigger: GCTGAGGTACACGGTTAGCAAAACCATGGGAAGGGG...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
3UTR-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATTGAGACAAATTCATTaGTGCTTTGTAGCAGAACTC +
Preference number: 3 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQLRQIH*CFVAEL
Trigger: GAGTTCTGCTACAAAGCACAAATGAATTTGTCTCAA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
3UTR TCA 72 bp GGCCTTACTCCATGTAACTCCCCCTTCTCTGAAGGCTaGCATTTCCAAGTGCATGCCACTAAAGGTAACAAT +
Preference number: 3 (lower is better)
Translates to: GLTPCNSPFSEG*HFQVHATKGNN
Trigger: ATTGTTACCTTTAGTGGCATGCACTTGGAAATGTCAGCCTTCAGAGAAGGGGGAGTTACATGGAGTAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp GTAACTCCCCCTTCTCTGAAGGCTGACATTTCCAAGTaGATGCCACTAAAGGTAACAATGTCACAGCGACTA +
Preference number: 3 (lower is better)
Translates to: VTPPSLKADISK*MPLKVTMSQRL
Trigger: TAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAAATGTCAGCCTTCAGAGAAGGGGGAGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp CTCCTGCTCCTGGGTGCACTAGGGAATTCCCATCAATaGTTCAGCTCCATCCAAACTCTAAAGTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: LLLLGALGNSHQ*FSSIQTLKFLF
Trigger: AAAGAGAAACTTTAGAGTTTGGATGGAGCTGAAGCATTGATGGGAATTCCCTAGTGCACCCAGGAGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp TTCCTGTTGCCAGAGCATGCAGGTGGTGTCAATGACTaGTCCAAAGTAGATTGGAGTAGGAATGTATGCAAG +
Preference number: 3 (lower is better)
Translates to: FLLPEHAGGVND*SKVDWSRNVCK
Trigger: CTTGCATACATTCCTACTCCAATCTACTTTGGAGCAGTCATTGACACCACCTGCATGCTCTGGCAACAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CCA 72 bp CAGTCAAGCAAGGTTGGAGAGCAGAAGCCTGAATCATaGAACAGTCTGTCAATCACATCTCTTCTGGGGATA +
Preference number: 3 (lower is better)
Translates to: QSSKVGEQKPES*NSLSITSLLGI
Trigger: TATCCCCAGAAGAGATGTGATTGACAGACTGTTCCATGATTCAGGCTTCTGCTCTCCAACCTTGCTTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp CTGTGGTGCACATTTCAGGCCCATTTCTTTGAGTTCTaGCCCAATCATCCCAAAGGATTTTATGGAGTGGCA +
Preference number: 3 (lower is better)
Translates to: LWCTFQAHFFEF*PNHPKGFYGVA
Trigger: TGCCACTCCATAAAATCCTTTGGGATGATTGGGCCAGAACTCAAAGAAATGGGCCTGAAATGTGCACCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp CACTTTCTGGCTCCAAGTGCACCAAAGAGCGCAAGCTaGAATTGTGGACTGAAGAAGAATTTTCTTGGTGGT +
Preference number: 3 (lower is better)
Translates to: HFLAPSAPKSAS*NCGLKKNFLGG
Trigger: ACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTCTTTGGTGCACTTGGAGCCAGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp ACGGTTTCTACAAAACAGGGCCAAAAAGACACTTTCTaGCTCCAAGTGCACCAAAGAGCGCAAGCTGGAATT +
Preference number: 3 (lower is better)
Translates to: TVSTKQGQKDTF*LQVHQRAQAGI
Trigger: AATTCCAGCTTGCGCTCTTTGGTGCACTTGGAGCCAGAAAGTGTCTTTTTGGCCCTGTTTTGTAGAAACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CAA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGATGACCATAGGCTCCTaGGCAGAAAAAGTTCACAAT +
Preference number: 3 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLMTIGS*AEKVHN
Trigger: ATTGTGAACTTTTTCTGCCAAGGAGCCTATGGTCAT...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 72 bp AATTGTGGACTGAAGAAGAATTTTCTTGGTGGTTGGTaGACATGGAGGACCACCATGACATCCATGAGGCCT +
Preference number: 3 (lower is better)
Translates to: NCGLKKNFLGGW*TWRTTMTSMRP
Trigger: AGGCCTCATGGATGTCATGGTGGTCCTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp GATGTTTTAAGTACATACACGATCACAAAATATAATTaGCTACCACCCGAGGCTTGGGCTTGCCTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: DVLSTYTITKYN*LPPEAWACLLL
Trigger: GAGCAGGAGGCAAGCCCAAGCCTCGGGTGGTAGCCAATTATATTTTGTGATCGTGTATGTACTTAAAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CAA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTTTGAGACAAATTCATTaGTGCTTTGTAGCAGAACTC +
Preference number: 3 (lower is better)
Translates to: KDKVHEATTFACQPQHSLLRQIH*CFVAEL
Trigger: GAGTTCTGCTACAAAGCACAAATGAATTTGTCTCAA...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 72 bp AAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACTGAGTTTTGTTGGTTT +
Preference number: 3 (lower is better)
Translates to: KALSLVEVSSPQ*IAAVYTEFCWF
Trigger: AAACCAACAAAACTCAGTATACACAGCCGCTATTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
3UTR GCA 72 bp CGTGCTGAGTCCAGCAATCTTAGCTACCAGAAAAAGTaGCAATCCCACCAAAATTCTCTCAATGCAGTATCT +
Preference number: 3 (lower is better)
Translates to: RAESSNLSYQKK*QSHQNSLNAVS
Trigger: AGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCTGGTAGCTAAGATTGCTGGACTCAGCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp CAAAAAGATAAAGTGCATGAGGCAACTACCTTTGCCTaGCAGCCGCAGCACTCTCTTATTATGGAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: QKDKVHEATTFA*QPQHSLIMEEK
Trigger: TTTCTCTTCCATAATAAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp AAGCTGGAATTGTGGACTGAAGAAGAATTTTCTTGGTaGTTGGTGAACATGGAGGACCACCATGACATCCAT +
Preference number: 3 (lower is better)
Translates to: KLELWTEEEFSW*LVNMEDHHDIH
Trigger: ATGGATGTCATGGTGGTCCTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CAA 90 bp ATTGCAGGTCCGTTTACATTTCCCAGACACAGCATAGCCGTTCTCATTGAGATAGAAAAGAAGGCACAGTaGTTTCTCAAGTCGCCATTT +
Preference number: 3 (lower is better)
Translates to: IAGPFTFPRHSIAVLIEIEKKAQ*FLKSPF
Trigger: AAATGGCGACTTGAGAAACAACTGTGCCTTCTTTTC...TATCTCAATGAGAACGGCTATGCTGTGTCTGGGAAATGTAAACGGACCTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR CAA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCCAATTATATCAGCATTaGGCCCTTACACTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: VNHISSGDKGKPEEKNISQLYQH*ALTLPG
Trigger: GCCAGGGAGTGTAAGGGCCAAATGCTGATATAATTG...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 72 bp GCCAGCCAGACAAGGGTTAAAGTATGTAATTCCATCTaGTCCACAGACTGGCTCATACTCGTGTATTTTACA +
Preference number: 3 (lower is better)
Translates to: ASQTRVKVCNSI*STDWLILVYFT
Trigger: TGTAAAATACACGAGTATGAGCCAGTCTGTGGATCAGATGGAATTACATACTTTAACCCTTGTCTGGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR GCA 72 bp GTAGGAATGTATGCAAGTGTTCGCAACAAAACAAACTaGATTCCCAGTGCAAAAGGTCTCTCCTCATCTTCT +
Preference number: 3 (lower is better)
Translates to: VGMYASVRNKTN*IPSAKGLSSSS
Trigger: AGAAGATGAGGAGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATACATTCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR-3UTR CAA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGAGGCTCTCAGTCTTGTaGAGGTATCCAGCCCTCAAT +
Preference number: 3 (lower is better)
Translates to: RKSANPTKILSMQYLNDQRLSVL*RYPALN
Trigger: ATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCT...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp ATGCTTCAGCTCCATCCAAACTCTAAAGTTTCTCTTTaGTACATGCACGGTTTCTACAAAACAGGGCCAAAA +
Preference number: 3 (lower is better)
Translates to: MLQLHPNSKVSL*YMHGFYKTGPK
Trigger: TTTTGGCCCTGTTTTGTAGAAACCGTGCATGTACCAAAGAGAAACTTTAGAGTTTGGATGGAGCTGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGAAAAGAAGGCACAGTaGTTTCTCAAGTCGCCATTT +
Preference number: 3 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKEKKAQ*FLKSPF
Trigger: AAATGGCGACTTGAGAAACAACTGTGCCTTCTTTTC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
3UTR-3UTR CAA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGCTGAGTTTTGTTGGTTaGAGGATTGTGTCTGTAGAG +
Preference number: 3 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLLSFVG*RIVSVE
Trigger: CTCTACAGACACAATCCTCAAACCAACAAAACTCAG...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
3UTR GCA 72 bp GAAAGCATTCTCTATGATGCTTACTTCAAAGTGATGTaGTGGGAGGTACTGAAAAGAATGATGGGTAATGAA +
Preference number: 3 (lower is better)
Translates to: ESILYDAYFKVM*WEVLKRMMGNE
Trigger: TTCATTACCCATCATTCTTTTCAGTACCTCCCAGCACATCACTTTGAAGTAAGCATCATAGAGAATGCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp ACTACCTTTCTTCATAATGTTTCATTTCAGAAACTCTaGCGAGACCCGATGTTAACACGAAGACTAGATTTG +
Preference number: 3 (lower is better)
Translates to: TTFLHNVSFQKL*RDPMLTRRLDL
Trigger: CAAATCTAGTCTTCGTGTTAACATCGGGTCTCGGCAGAGTTTCTGAAATGAAACATTATGAAGAAAGGTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR TCA 72 bp TATTCCAGTGATGCTACCATAGCCCCAAGTATTTTGTaGACCACTCTTAATTGGTACATATTCCAAAGCTTT +
Preference number: 3 (lower is better)
Translates to: YSSDATIAPSIL*TTLNWYIFQSF
Trigger: AAAGCTTTGGAATATGTACCAATTAAGAGTGGTTCACAAAATACTTGGGGCTATGGTAGCATCACTGGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp AAACTCTACCTGATTTATAACTGCTATGGCTTAAAATaGTATCAACAGTACTGGATGGAAAGTTCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: KLYLIYNCYGLK*YQQYWMESSAS
Trigger: GGAAGCTGAACTTTCCATCCAGTACTGTTGATAGCATTTTAAGCCATAGCAGTTATAAATCAGGTAGAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp ACATTGTTCAGTCTAACAGTGTTAACACAAACTGTATaGAACCAAGAGAACTGTTTGACCAATGTCATTCCT +
Preference number: 3 (lower is better)
Translates to: TLFSLTVLTQTV*NQENCLTNVIP
Trigger: AGGAATGACATTGGTCAAACAGTTCTCTTGGTTGCATACAGTTTGTGTTAACACTGTTAGACTGAACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CCA 72 bp TATAACTGCTATGGCTTAAAATGCTATCAACAGTACTaGATGGAAAGTTCAGCTTCCTCTTTTCAGAAACAT +
Preference number: 3 (lower is better)
Translates to: YNCYGLKCYQQY*MESSASSFQKH
Trigger: ATGTTTCTGAAAAGAGGAAGCTGAACTTTCCATCCAGTACTGTTGATAGCATTTTAAGCCATAGCAGTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp TCTGAAGCATTTGAAAAACTCTACCTGATTTATAACTaGTATGGCTTAAAATGCTATCAACAGTACTGGATG +
Preference number: 3 (lower is better)
Translates to: SEAFEKLYLIYN*YGLKCYQQYWM
Trigger: CATCCAGTACTGTTGATAGCATTTTAAGCCATAGCAGTTATAAATCAGGTAGAGTTTTTCAAATGCTTCAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR GCA 72 bp TCAGTATGCACCTACATATCAATAGTTATATTCATGTaGTGTGTCATCTCTGATGTTTTAAGTACATACACG +
Preference number: 3 (lower is better)
Translates to: SVCTYISIVIFM*CVISDVLSTYT
Trigger: CGTGTATGTACTTAAAACATCAGAGATGACACAGCACATGAATATAACTATTGATATGTAGGTGCATACTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCAAGTGGGACTGAGGCTTaGCCGGCAGGAGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQEGGSKAAGLSSSPGSASGTEA*PAGGAA
Trigger: AGCAGCGCCTCCTGCCGGCCAAGCCTCAGTCCCACT...TGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp TTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCAGCTCTTGGACAGCTTCTaGAGTGGCCGGCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FRRAAPRQRGSLPAPGPQLLDSF*SGRRLQ
Trigger: CTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAG...CTGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp TCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTTTGCCCACCTGGGACTaGGGCTGGGGGCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGHCRGVPLSHSRCSGEILPTWD*GWGRRA
Trigger: GGCCCTGCGCCCCCAGCCCCAGTCCCAGGTGGGCAA...AATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTTTGCCCACCTGGGACTaGGGCTGGGGGCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGLPTWD*GWGRRA
Trigger: GGCCCTGCGCCCCCAGCCCCAGTCCCAGGTGGGCAA...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp TTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCAGGTCTGTGCTGCGCACTaGATCCCTTTTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FRRAAPRQRGSLPAPGPQVCAAH*IPFCRP
Trigger: TGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC...CTGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCTCCGGGCGGTAGCTTaGGGCAGGCGCCTCGCGCGT +
Preference number: 4 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTLRAVA*GRRLAR
Trigger: ACGCGCGAGGCGCCTGCCTCAAGCTACCGCCCGGAG...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CACACGGAGCTGACTTCGCTGTCCCACGGTGGGTGGAGTGATCACTTGGCGACTCTGCCCCGAAGGCGATaGGGAGTCCACCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: HTELTSLSHGGWSDHLATLPRRR*GVHPRP
Trigger: TGGCCGTGGGTGGACTCCTCATCGCCTTCGGGGCAG...AGTCGCCAAGTGATCACTCCACCCACCGTGGGACAGCGAAGTCAGCTCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR TCA 90 bp TTCAAGCTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGCCACGGTGGGTGGAGTaGTCACTTGGCGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: FKLQEGGSKAAGLSSSPGPRWVE*SLGDFG
Trigger: TCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGG...CCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAGCTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCAGGCTCTCAGTCTTGTTaGGGTATCCAGCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: LQEGGSKAAGLSSSPGSAGSQSC*GIQPSM
Trigger: CATTGAGGGCTGGATACCTCAACAAGACTGAGAGCC...TGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCACACTGGATCCCTTTTTaGAGGCCAGTCTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: LQEGGSKAAGLSSSPGSAHWIPF*RPVSSW
Trigger: CCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTG...TGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTACGGGGCAGAGGGACTaGGGGCCAACGGGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: RALSGCPTLSLTVLRGNSTGQRD*GPTGSG
Trigger: GCCCGAACCCGTTGGCCCCCAGTCCCTCTGCCCCGT...AGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp TGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCCTTTTTGCGGCACCCTCGGGAGTaGAGCTGCCGACCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: CFWEGPRVGLCCALDPFLRHPRE*SCRPAK
Trigger: CTTTGCAGGTCGGCAGCTTCACTCCCGAGGGTGCCG...CAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR GCA 90 bp TCTTCCATTTTCAAGCTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCTCTCCCGCCCCGGGCTaGAGTCCAGTGCCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: SSIFKLQEGGSKAAGLSSSPAPG*SPVPSS
Trigger: GGACGAAGGCACTGGACTGCAGCCCGGGGCGGGAGA...GGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAGCTTGAAAATGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTGGGTCCGCGCGGTACTaGGATGAGCCCTACTCGGCG +
Preference number: 4 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTGSARY*DEPYSA
Trigger: CGCCGAGTAGGGCTCATCGCAGTACCGCGCGGACCC...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CCTCCGCCTCTGCAGTCCATCCTCCTTGTATTTTATGGAGTACCAGGCCAGAAACTCCGGGCGGTAGCTTaGGGCAGGCGCCTCGCGCGT +
Preference number: 4 (lower is better)
Translates to: PPPLQSILLVFYGVPGQKLRAVA*GRRLAR
Trigger: ACGCGCGAGGCGCCTGCCTCAAGCTACCGCCCGGAG...TTTCTGGCCTGGTACTCCATAAAATACAAGGAGGATGGACTGCAGAGGCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp TTCAAGCTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTTCAGATTTGATAGCTaGTGGCACCCAAGCACTCCG +
Preference number: 4 (lower is better)
Translates to: FKLQEGGSKAAGLSSSPGFRFDS*WHPSTP
Trigger: CGGAGTGCTTGGGTGCCATCAGCTATCAAATCTGAA...CCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAGCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCGGGACCAGGGTTAGGTaGCCCCGAACCGTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: QDLVRALSGCPTLSLTVLGTRVR*PRTVPR
Trigger: TCTAGGGACGGTTCGGGGTCACCTAACCCTGGTCCC...GAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR GCA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTGGCATCCTCACCAGCTaGGAGGCGCCCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTGILTS*EAPSAS
Trigger: GGATGCACTGGGCGCCTCGCAGCTGGTGAGGATGCC...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp TTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCAGAAACTGCATTCCCAGTaGAAAAGGTCTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FRRAAPRQRGSLPAPGPQKLHSQ*KRSLLI
Trigger: GATGAGGAGAGACCTTTTGCACTGGGAATGCAGTTT...CTGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACGAGCCCCGCCGAAGTaGACGGGGCAGAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQRAPPK*TGQRDW
Trigger: CCAGTCCCTCTGCCCCGTCCACTTCGGCGGGGCTCG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGACACAGGCCGTCGTTaGGGGCCGAGGCGTTCAACT +
Preference number: 4 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGDTGRR*GPRRST
Trigger: AGTTGAACGCCTCGGCCCCCAACGACGGCCTGTGTC...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTAGCAACGGGAATCCGTaGGGACCACGTAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: RALSGCPTLSLTVLRGNSSNGNP*GPRRGT
Trigger: GGTGCCTCTACGTGGTCCTCACGGATTCCCGTTGCT...AGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCGTGGAGTTGCCACCCTaGCACAGGCCGTCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVAVELPP*HRPSLG
Trigger: CCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCAC...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTAAGTGGCGGTGGAGTTaGCACCCTGACACAGGCCGT +
Preference number: 4 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGKWRWS*HPDTGR
Trigger: ACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTT...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GCTGAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCAAGTGGCGGTGGAGTTaGCACCCTGACACAGGCCGT +
Preference number: 4 (lower is better)
Translates to: AESWARSSPGIVGVSHSLKWRWS*HPDTGR
Trigger: ACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTT...GAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CCTCCGCCTCTGCAGTCCATCCTCCTTGTATTTTATGGAGTACCAGGCCAGAAACGAGCCCCGCCGAAGTaGACGGGGCAGAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: PPPLQSILLVFYGVPGQKRAPPK*TGQRDW
Trigger: CCAGTCCCTCTGCCCCGTCCACTTCGGCGGGGCTCG...TTTCTGGCCTGGTACTCCATAAAATACAAGGAGGATGGACTGCAGAGGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp TCTTCCATTTTCAAGCTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGGCACCTTCTCTCCTaGAGCATGGCCAAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SSIFKLQEGGSKAAGLSSRHLLS*SMAKAE
Trigger: CTCCGCCTTGGCCATGCTCCAGGAGAGAAGGTGCCT...GGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAGCTTGAAAATGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR CAA 72 bp TGGGTGCTGAAAGCTGGGCAAGATCTAGTCCGGGCATaGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: WVLKAGQDLVRA*SGCPTLSLTVL
Trigger: GAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTCAGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACCGAGAAGGTTTTGCTaGGGTCCACCCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: RRGTYCFWEGPRVGLCCAPRRFC*GPPCGY
Trigger: GTAACCACAGGGTGGACCTCAGCAAAACCTTCTCGG...TGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACTGCCCCGAAGGCGATaGGGAGTCCACCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNELPRRR*GVHPRP
Trigger: TGGCCGTGGGTGGACTCCTCATCGCCTTCGGGGCAG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTCTAGCATCCCACCTCGCTaGGCCAGGGGTACCGGGTGT +
Preference number: 4 (lower is better)
Translates to: VCAAHWIPFCRPVSSWNSSIPPR*ARGTGC
Trigger: ACACCCGGTACCCCTGGCGCAGCGAGGTGGGATGCT...AGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGGCATCCTCACCAGCTaGGAGGCGCCCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQGILTS*EAPSAS
Trigger: GGATGCACTGGGCGCCTCGCAGCTGGTGAGGATGCC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCGGCATCCTCACCAGCTaGGAGGCGCCCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: PVSSWNSPWVLKAGQDLVGILTS*EAPSAS
Trigger: GGATGCACTGGGCGCCTCGCAGCTGGTGAGGATGCC...GACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAATCTCCCGCCCCGGGCTaGAGTCCAGTGCCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNESPAPG*SPVPSS
Trigger: GGACGAAGGCACTGGACTGCAGCCCGGGGCGGGAGA...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp CTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTCCCCGGGTAGGTCTGTaGTGCGCACTGGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: LPARTLHTTFLLPEHAGGPRVGL*CALDPF
Trigger: AAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGG...ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTCGCAGAGGAACTTATTaGTTCTGGGAAGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGRRGTY*FWEGPR
Trigger: CCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATCAGCGAAGAGCGGCTaGGGCTTGGGGCTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQSAKSG*GLGLAS
Trigger: GGACGCTAGCCCCAAGCCGCAGCCGCTCTTCGCTGA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTTTGCCCACCTGGGACTaGGGCTGGGGGCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPLPTWD*GWGRRA
Trigger: GGCCCTGCGCCCCCAGCCCCAGTCCCAGGTGGGCAA...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGGACAGCTTCTGCAGTaGCCGGCGCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQGQLLQ*PAPPAA
Trigger: AGCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTGGCTCGCACCTCTCTTaGACAGCTTCTGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTGSHLS*TASAVA
Trigger: GGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCC...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCCTGAGGTCCACCCTGTaGTTACAGTCCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVALRSTL*LQSPSP
Trigger: GGGGCTCGGGGACTGTAACCACAGGGTGGACCTCAG...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCTGAGGTCCACCCTGTaGTTACAGTCCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RHVVLPARTLHTTFLLPELRSTL*LQSPSP
Trigger: GGGGCTCGGGGACTGTAACCACAGGGTGGACCTCAG...CTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp TTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCAGCCTCCTTGTATTTTATaGAGTACCAGGCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: FRRAAPRQRGSLPAPGPQPPCIL*STRPEK
Trigger: TTTTTCTGGCCTGGTACTCCATAAAATACAAGGAGG...CTGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTCTGGGTGCTGAAAGCTaGGCAAGATCTAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: RALSGCPTLSLTVLRGNSLGAES*ARSSPG
Trigger: GCCCGGACTAGATCTTGCCCAGCTTTCAGCACCCAG...AGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACGATGTCAAAGCAGCTaGCCAGCAGCCCCGACTCGG +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQRCQSS*PAAPTR
Trigger: CCGAGTCGGGGCTGCTGGTCAGCTGCTTTGACATCG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAGTGGAGTTGCCACCCTaGCACAGGCCGTCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEVELPP*HRPSLG
Trigger: CCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCAC...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTAGCATCCCACCTCGCTaGGCCAGGGGTACCGGGTGT +
Preference number: 4 (lower is better)
Translates to: ETTSRCTPSKNPAHHIPVSIPPR*ARGTGC
Trigger: ACACCCGGTACCCCTGGCGCAGCGAGGTGGGATGCT...AACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCATCCCAGCAAGAACCCTaGACACCACATTCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RRGTYCFWEGPRVGLCCASQQEP*TPHSCC
Trigger: GCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGA...TGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTCGCAGAGGAACTTATTaGTTCTGGGAAGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPARTLHTTFLLPEHAGGRRGTY*FWEGPR
Trigger: CCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG...ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGGGCTCGCACCTCTCTTaGACAGCTTCTGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RHVVLPARTLHTTFLLPEGSHLS*TASAVA
Trigger: GGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCC...CTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGACGGGGCAGAGGGACTaGGGGCCAACGGGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLTGQRD*GPTGSG
Trigger: GCCCGAACCCGTTGGCCCCCAGTCCCTCTGCCCCGT...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACTGAGGTCCACCCTGTaGTTACAGTCCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQLRSTL*LQSPSP
Trigger: GGGGCTCGGGGACTGTAACCACAGGGTGGACCTCAG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACCGGAGGCTCCAAAGTaGCGGTGGAGTTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQPEAPK*RWSCHP
Trigger: AGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCGTCTGTCTGCCTGGCTaGGTAGAGCGGCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLVCLPG*VERREG
Trigger: CCCCTCCCGCCGCTCTACTCAGCCAGGCAGACAGAC...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp CTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTCCGAGAAGGTTTTGCTaGGGTCCACCCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: LPARTLHTTFLLPEHAGGPRRFC*GPPCGY
Trigger: GTAACCACAGGGTGGACCTCAGCAAAACCTTCTCGG...ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp AGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCGAGCAACGGGAATCCGTaGGGACCACGTAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: SLFVEFSLGAESWARSSPSNGNP*GPRRGT
Trigger: GGTGCCTCTACGTGGTCCTCACGGATTCCCGTTGCT...CGGACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACGATGTCAAAGCAGCTaGCCAGCAGCCCCGACTCGG +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNERCQSS*PAAPTR
Trigger: CCGAGTCGGGGCTGCTGGTCAGCTGCTTTGACATCG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTGGGGGCGAGATGAAGTaGGGTAAGGCGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASLFVEFSLGAESWARSSGGEMK*GKAKRA
Trigger: AGCCCTCTTCGCCTTACCTCACTTCATCTCGCCCCC...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGGGGGCGAGATGAAGTaGGGTAAGGCGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQGGEMK*GKAKRA
Trigger: AGCCCTCTTCGCCTTACCTCACTTCATCTCGCCCCC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCAGAATCTGCGCGCAAATaGATAAAGCCACGTAGACCC +
Preference number: 4 (lower is better)
Translates to: RRGTYCFWEGPRVGLCCAESARK*IKPRRP
Trigger: GGGTCTACGTGGCTTTATTCATTTGCGCGCAGATTC...TGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTAGCATCCCACCTCGCTaGGCCAGGGGTACCGGGTGT +
Preference number: 4 (lower is better)
Translates to: KDKVHEATTFACQPQHSLSIPPR*ARGTGC
Trigger: ACACCCGGTACCCCTGGCGCAGCGAGGTGGGATGCT...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp AGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCGCGGGCTGCAGTCCAGTaGCTTCGTCCATGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: SLFVEFSLGAESWARSSPRAAVQ*LRPWRL
Trigger: TAAGCGCCATGGACGAAGGCACTGGACTGCAGCCCG...CGGACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTCTAACGGGTTCGGGCCTTaGTTCAACTCCTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VCAAHWIPFCRPVSSWNSNGFGP*FNSWWP
Trigger: GGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTT...AGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTAGGTCAGAAAGCACATaGACACCAGGAAGCAACGGG +
Preference number: 4 (lower is better)
Translates to: RALSGCPTLSLTVLRGNSRSEST*TPGSNG
Trigger: CCCGTTGCTTCCTGGTGTGCATGTGCTTTCTGACCT...AGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAAGGCACCTTCTCTCCTaGAGCATGGCCAAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQRHLLS*SMAKAE
Trigger: CTCCGCCTTGGCCATGCTCCAGGAGAGAAGGTGCCT...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp TGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCCTTTTTGCCTGTCAGATTCCTATaGGGCATGGTGAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CFWEGPRVGLCCALDPFLPVRFL*GMVREG
Trigger: ACCTTCTCTCACCATGCCCCATAGGAATCTGACAGG...CAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp TCTTCCATTTTCAAGCTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCGGTGGAGTGATCACTTaGCGACTTTGGACACAGGTG +
Preference number: 4 (lower is better)
Translates to: SSIFKLQEGGSKAAGLSSGGVIT*RLWTQV
Trigger: CACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACC...GGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAGCTTGAAAATGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp AAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACCGCGCGGTACTGCGATaGGCCCTACTCGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: KIHKTKRRHVVLPARTLHRAVLR*ALLGVP
Trigger: AGGGACGCCGAGTAGGGCTCATCGCAGTACCGCGCG...GTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTTTCAGATTTGATAGCTaGTGGCACCCAAGCACTCCG +
Preference number: 4 (lower is better)
Translates to: RALSGCPTLSLTVLRGNSFRFDS*WHPSTP
Trigger: CGGAGTGCTTGGGTGCCATCAGCTATCAAATCTGAA...AGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAAGCAACGGGAATCCGTaGGGACCACGTAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNESNGNP*GPRRGT
Trigger: GGTGCCTCTACGTGGTCCTCACGGATTCCCGTTGCT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp AAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACCTGCCCCGAAGGCGATaGGGAGTCCACCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: KIHKTKRRHVVLPARTLHLPRRR*GVHPRP
Trigger: TGGCCGTGGGTGGACTCCTCATCGCCTTCGGGGCAG...GTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGGTGGAGTTGCCACCCTaGCACAGGCCGTCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLVELPP*HRPSLG
Trigger: CCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCAC...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp CGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTGAATCTGCGCGCAAATaGATAAAGCCACGTAGACCC +
Preference number: 4 (lower is better)
Translates to: RALSGCPTLSLTVLRGNSESARK*IKPRRP
Trigger: GGGTCTACGTGGCTTTATTCATTTGCGCGCAGATTC...AGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCTCCTATGGGGCATGGTaGGAGAAGGTCCTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: QDLVRALSGCPTLSLTVLSYGAW*EKVLLY
Trigger: ATACAACAGGACCTTCTCTCACCATGCCCCATAGGA...GAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR TCA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTATAACCACACGGAGCTaGCTTCGCTGTCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: ASLFVEFSLGAESWARSSITTRS*LRCPTV
Trigger: CACCGTGGGACAGCGAAGTCAGCTCCGTGTGGTTAT...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTGGCTCTCAGTCTTGTTaGGGTATCCAGCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: LPARTLHTTFLLPEHAGGGSQSC*GIQPSM
Trigger: CATTGAGGGCTGGATACCTCAACAAGACTGAGAGCC...ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAAACGGGTTCGGGCCTTaGTTCAACTCCTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNENGFGP*FNSWWP
Trigger: GGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACCCCGGGTAGGTCTGTaGTGCGCACTGGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEPRVGL*CALDPF
Trigger: AAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGAGTGGGACTGAGGCTTaGCCGGCAGGAGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLSGTEA*PAGGAA
Trigger: AGCAGCGCCTCCTGCCGGCCAAGCCTCAGTCCCACT...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTTGCTTCAACTCCTGGTaGCCCGAAGAATCCACACAG +
Preference number: 4 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTCFNSW*PEESTQ
Trigger: CTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCA...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAATTCTCTCCTGGAGCATaGCCAAGGCGGAGGACACCG +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEFSPGA*PRRRTP
Trigger: CGGTGTCCTCCGCCTTGGCCATGCTCCAGGAGAGAA...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp CCTCCGCCTCTGCAGTCCATCCTCCTTGTATTTTATGGAGTACCAGGCCAGAAATTCTCTCCTGGAGCATaGCCAAGGCGGAGGACACCG +
Preference number: 4 (lower is better)
Translates to: PPPLQSILLVFYGVPGQKFSPGA*PRRRTP
Trigger: CGGTGTCCTCCGCCTTGGCCATGCTCCAGGAGAGAA...TTTCTGGCCTGGTACTCCATAAAATACAAGGAGGATGGACTGCAGAGGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGCTCCAAAGTGGCGGTaGAGTTGCCACCCTGACACA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQAPKWR*SCHPDT
Trigger: TGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp CCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCGCTCCAAAGTGGCGGTaGAGTTGCCACCCTGACACA +
Preference number: 4 (lower is better)
Translates to: PVSSWNSPWVLKAGQDLVAPKWR*SCHPDT
Trigger: TGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGC...GACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCTGGGTGCTGAAAGCTaGGCAAGATCTAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: ASLFVEFSLGAESWARSSLGAES*ARSSPG
Trigger: GCCCGGACTAGATCTTGCCCAGCTTTCAGCACCCAG...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
3UTR CAA 72 bp GTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTaGCCAGAGCATGCAGGTGGTGTCAATGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: VLPARTLHTTFL*PEHAGGVNDCS
Trigger: GGAGCAGTCATTGACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR TCA 90 bp GTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCTCTCCTCATCTTCGCGCGGTACTGCGATaGGCCCTACTCGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: VFATKQTAFPVQKVSPHLRAVLR*ALLGVP
Trigger: AGGGACGCCGAGTAGGGCTCATCGCAGTACCGCGCG...AAGATGAGGAGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAGCGCCCAGTGCATCCTaGTCACAGACACGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEAPSAS*SQTRLQ
Trigger: TTGAAGCCGTGTCTGTGATCAGGATGCACTGGGCGC...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACCGAGAAGGTTTTGCTaGGGTCCACCCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQPRRFC*GPPCGY
Trigger: GTAACCACAGGGTGGACCTCAGCAAAACCTTCTCGG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGCGATGTCAAAGCAGCTaGCCAGCAGCCCCGACTCGG +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLRCQSS*PAAPTR
Trigger: CCGAGTCGGGGCTGCTGGTCAGCTGCTTTGACATCG...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCGATGTCAAAGCAGCTaGCCAGCAGCCCCGACTCGG +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPRCQSS*PAAPTR
Trigger: CCGAGTCGGGGCTGCTGGTCAGCTGCTTTGACATCG...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACCACGGTGGGTGGAGTaGTCACTTGGCGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEPRWVE*SLGDFG
Trigger: TCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp GAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTATAACCACACGGAGCTaGCTTCGCTGTCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: ETTSRCTPSKNPAHHIPVITTRS*LRCPTV
Trigger: CACCGTGGGACAGCGAAGTCAGCTCCGTGTGGTTAT...AACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAATAACCACACGGAGCTaGCTTCGCTGTCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEITTRS*LRCPTV
Trigger: CACCGTGGGACAGCGAAGTCAGCTCCGTGTGGTTAT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp AGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACT +
Preference number: 4 (lower is better)
Translates to: RGTYCFWEGPRVGLCCALVSSPQ*IAAVYT
Trigger: AGTATACACAGCCGCTATTCATTGAGGGCTGGATAC...CAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGGGAACAAATCTAGCTaGACGTCTCCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGGNKSS*TSPSWR
Trigger: TCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCC...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATACCCCTGAGCTAACTTaGTGTCAATCCGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHTPELT*CQSVSA
Trigger: GGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGT...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp AAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACGGACAGCTTCTGCAGTaGCCGGCGCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KIHKTKRRHVVLPARTLHGQLLQ*PAPPAA
Trigger: AGCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCC...GTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp GCAGCCAAACCAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAAGTGGGACTGAGGCTTaGCCGGCAGGAGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAKPKYTKRNDVTLYSQQSGTEA*PAGGAA
Trigger: AGCAGCGCCTCCTGCCGGCCAAGCCTCAGTCCCACT...TTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCCCTTGCTTCAACTCCTaGTGGCCCGAAGAATCCACA +
Preference number: 4 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVAPCFNS*WPEEST
Trigger: TGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGG...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGACGGGGCAGAGGGACTaGGGGCCAACGGGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: INTTEMGTNLAERLLLGETGQRD*GPTGSG
Trigger: GCCCGAACCCGTTGGCCCCCAGTCCCTCTGCCCCGT...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTACGGGGCAGAGGGACTaGGGGCCAACGGGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGTGQRD*GPTGSG
Trigger: GCCCGAACCCGTTGGCCCCCAGTCCCTCTGCCCCGT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATCGAGCCCCGCCGAAGTaGACGGGGCAGAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: FQVHATKGNNVTATKGNNRAPPK*TGQRDW
Trigger: CCAGTCCCTCTGCCCCGTCCACTTCGGCGGGGCTCG...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGCGAGCCCCGCCGAAGTaGACGGGGCAGAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: INTTEMGTNLAERLLLGERAPPK*TGQRDW
Trigger: CCAGTCCCTCTGCCCCGTCCACTTCGGCGGGGCTCG...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCGACACAGGCCGTCGTTaGGGGCCGAGGCGTTCAACT +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLDTGRR*GPRRST
Trigger: AGTTGAACGCCTCGGCCCCCAACGACGGCCTGTGTC...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCCGGAGGCTCCAAAGTaGCGGTGGAGTTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPPEAPK*RWSCHP
Trigger: AGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGG...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CCA 90 bp GAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTCTGTCCCACGGTGGGTaGAGTGATCACTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: ETTSRCTPSKNPAHHIPVLSHGG*SDHLAT
Trigger: AGTCGCCAAGTGATCACTCCACCCACCGTGGGACAG...AACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACTGGGTGCTGAAAGCTaGGCAAGATCTAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNELGAES*ARSSPG
Trigger: GCCCGGACTAGATCTTGCCCAGCTTTCAGCACCCAG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp AGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCGGGAACTTATTGCTTCTaGGAAGGGCCCCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SLFVEFSLGAESWARSSPGTYCF*EGPRVG
Trigger: ACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCC...CGGACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGGAAATGCCAAGTCCTaGGCAAGCTCACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGGNAKS*ASSPLF
Trigger: AAACAAAGGTGAGCTTGCCCAGGACTTGGCATTTCC...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR TCA 90 bp AAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACGGCCGCCGAAGTAGCTaGCGAACACCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: KIHKTKRRHVVLPARTLHGRRSS*RTPPPP
Trigger: TGGTGGTGGTGGTGTTCGTCAGCTACTTCGGCGGCC...GTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATCTGCCCCGAAGGCGATaGGGAGTCCACCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: FQVHATKGNNVTATKGNNLPRRR*GVHPRP
Trigger: TGGCCGTGGGTGGACTCCTCATCGCCTTCGGGGCAG...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCGGGCTGCAGTCCAGTaGCTTCGTCCATGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPRAAVQ*LRPWRL
Trigger: TAAGCGCCATGGACGAAGGCACTGGACTGCAGCCCG...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR GCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCCGGGCTGCAGTCCAGTaGCTTCGTCCATGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLRAAVQ*LRPWRL
Trigger: TAAGCGCCATGGACGAAGGCACTGGACTGCAGCCCG...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTCTCCCGCCCCGGGCTaGAGTCCAGTGCCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGSPAPG*SPVPSS
Trigger: GGACGAAGGCACTGGACTGCAGCCCGGGGCGGGAGA...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp CGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTAGGTCAGAAAGCACATaGACACCAGGAAGCAACGGG +
Preference number: 4 (lower is better)
Translates to: RNDVTLYSQQEPCTPHSCRSEST*TPGSNG
Trigger: CCCGTTGCTTCCTGGTGTGCATGTGCTTTCTGACCT...ACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTGGTGGTGTCAATGACTaGTCCAAAGTAGATTGGAGT +
Preference number: 4 (lower is better)
Translates to: RALSGCPTLSLTVLRGNSGGVND*SKVDWS
Trigger: ACTCCAATCTACTTTGGAGCAGTCATTGACACCACC...AGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCGGTGGTGTCAATGACTaGTCCAAAGTAGATTGGAGT +
Preference number: 4 (lower is better)
Translates to: QDLVRALSGCPTLSLTVLGGVND*SKVDWS
Trigger: ACTCCAATCTACTTTGGAGCAGTCATTGACACCACC...GAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTCTACACCACATTCCTGTTaGCAGAGCATGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VCAAHWIPFCRPVSSWNSTPHSC*QSMQVV
Trigger: CACCACCTGCATGCTCTGGCAACAGGAATGTGGTGT...AGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTGTCAATGACTACACCACATTCCTGTTaGCAGAGCATGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EPCTPHSCCQSMQVVSMTTPHSC*QSMQVV
Trigger: CACCACCTGCATGCTCTGGCAACAGGAATGTGGTGT...AGTCATTGACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAACACCACATTCCTGTTaGCAGAGCATGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQTPHSC*QSMQVV
Trigger: CACCACCTGCATGCTCTGGCAACAGGAATGTGGTGT...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GCCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTTCCCAGCAAGAACCCTaGACACCACATTCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ASLFVEFSLGAESWARSSSQQEP*TPHSCC
Trigger: GCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGA...ACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATCCCAGCAAGAACCCTaGACACCACATTCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQSQQEP*TPHSCC
Trigger: GCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTCTCTGCCTCCGCCTCTaGAGTCCATCCTCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: ETTSRCTPSKNPAHHIPVLCLRL*SPSSLY
Trigger: ATACAAGGAGGATGGACTGCAGAGGCGGAGGCAGAG...AACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACTCTGCCTCCGCCTCTaGAGTCCATCCTCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNELCLRL*SPSSLY
Trigger: ATACAAGGAGGATGGACTGCAGAGGCGGAGGCAGAG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAAGGGGAAATTCTCTCTaGCTCCGCCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNERGNSL*LRLCSP
Trigger: TGGACTGCAGAGGCGGAGGCAGAGAGAATTTCCCCT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACCAGGAAGCGGAGGTTaGAGTGAGCTGAGATTAAGC +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQPGSGG*SELRLS
Trigger: GCTTAATCTCAGCTCACTGCAACCTCCGCTTCCTGG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCCTTGCTTCAACTCCTaGTGGCCCGAAGAATCCACA +
Preference number: 4 (lower is better)
Translates to: PVSSWNSPWVLKAGQDLVPCFNS*WPEEST
Trigger: TGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGG...GACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACCTTGCTTCAACTCCTaGTGGCCCGAAGAATCCACA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQPCFNS*WPEEST
Trigger: TGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp CTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTGAGACCATTAACGCCTaGATGAAGGTCAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LPARTLHTTFLLPEHAGGETINA*MKVRKH
Trigger: GTGCTTTCTGACCTTCATCCAGGCGTTAATGGTCTC...ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTGAGACCATTAACGCCTaGATGAAGGTCAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTETINA*MKVRKH
Trigger: GTGCTTTCTGACCTTCATCCAGGCGTTAATGGTCTC...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp AAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACCCGGAGGCTCCAAAGTaGCGGTGGAGTTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: KIHKTKRRHVVLPARTLHPEAPK*RWSCHP
Trigger: AGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGG...GTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGGTGGAGTGATCACTTaGCGACTTTGGACACAGGTG +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQGGVIT*RLWTQV
Trigger: CACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTATGATAGCTGATGGTTaGGCACATGCTGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGMIADG*AHAVMK
Trigger: CTTCATCACAGCATGTGCCCAACCATCAGCTATCAT...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp AGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGATGATAGCTGATGGTTaGGCACATGCTGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: RGTYCFWEGPRVGLCCALMIADG*AHAVMK
Trigger: CTTCATCACAGCATGTGCCCAACCATCAGCTATCAT...CAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAGTCTGTGCTGCGCACTaGATCCCTTTTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEVCAAH*IPFCRP
Trigger: TGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAGGAACTTATTGCTTCTaGGAAGGGCCCCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEGTYCF*EGPRVG
Trigger: ACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCC...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
3UTR CAA 72 bp CTGTCCCACGGTGGGTGGAGTGATCACTTGGCGACTTaGGACACAGGTGCATTCTGTATAATTCCGTATCCC +
Preference number: 4 (lower is better)
Translates to: LSHGGWSDHLAT*DTGAFCIIPYP
Trigger: GGGATACGGAATTATACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR TCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGCTCCGGGCGGTAGCTTaGGGCAGGCGCCTCGCGCGT +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQLRAVA*GRRLAR
Trigger: ACGCGCGAGGCGCCTGCCTCAAGCTACCGCCCGGAG...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGGCGCCCAGTGCATCCTaGTCACAGACACGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLAPSAS*SQTRLQ
Trigger: TTGAAGCCGTGTCTGTGATCAGGATGCACTGGGCGC...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTCCGAGAAGGTTTTGCTaGGGTCCACCCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: KDKVHEATTFACQPQHSLPRRFC*GPPCGY
Trigger: GTAACCACAGGGTGGACCTCAGCAAAACCTTCTCGG...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACAGGGGGCGAGATGAAGTaGGGTAAGGCGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KYTKRNDVTLYSQQEPCTGGEMK*GKAKRA
Trigger: AGCCCTCTTCGCCTTACCTCACTTCATCTCGCCCCC...TGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGAATCTGCGCGCAAATaGATAAAGCCACGTAGACCC +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQESARK*IKPRRP
Trigger: GGGTCTACGTGGCTTTATTCATTTGCGCGCAGATTC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp CAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCGTATGTAATTCCATCTaGTCCACAGACTGGCTCATA +
Preference number: 4 (lower is better)
Translates to: QDLVRALSGCPTLSLTVLVCNSI*STDWLI
Trigger: TATGAGCCAGTCTGTGGATCAGATGGAATTACATAC...GAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGCCACGGTGGGTGGAGTaGTCACTTGGCGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLPRWVE*SLGDFG
Trigger: TCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGG...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAGGCTCTCAGTCTTGTTaGGGTATCCAGCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEGSQSC*GIQPSM
Trigger: CATTGAGGGCTGGATACCTCAACAAGACTGAGAGCC...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGGGTCCGCGCGGTACTaGGATGAGCCCTACTCGGCG +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKGSARY*DEPYSA
Trigger: CGCCGAGTAGGGCTCATCGCAGTACCGCGCGGACCC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACTGCGAGGCGCCCAGTaGATCCTGATCACAGACACG +
Preference number: 4 (lower is better)
Translates to: QNTQNETTSRCTPSKNPALRGAQ*ILITDT
Trigger: CGTGTCTGTGATCAGGATGCACTGGGCGCCTCGCAG...TGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAATCTCCCGCCCCGGGCTaGAGTCCAGTGCCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKSPAPG*SPVPSS
Trigger: GGACGAAGGCACTGGACTGCAGCCCGGGGCGGGAGA...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp AGCATAGCCGTTCTCATTGAGATAAGTCTTGACAATAACCACACGGAGCTGACTCTCTTGGACAGCTTCTaGAGTGGCCGGCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SIAVLIEISLDNNHTELTLLDSF*SGRRLQ
Trigger: CTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAG...AGTCAGCTCCGTGTGGTTATTGTCAAGACTTATCTCAATGAGAACGGCTATGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAAGGTCAGAAAGCACATaGACACCAGGAAGCAACGGG +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNERSEST*TPGSNG
Trigger: CCCGTTGCTTCCTGGTGTGCATGTGCTTTCTGACCT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTCTCTGCCTCCGCCTCTaGAGTCCATCCTCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: KDKVHEATTFACQPQHSLLCLRL*SPSSLY
Trigger: ATACAAGGAGGATGGACTGCAGAGGCGGAGGCAGAG...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGCGCAGAGGAACTTATTaGTTCTGGGAAGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLRRGTY*FWEGPR
Trigger: CCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGAGCTACGGGAATAGTTaGGAGCCGCGTGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLSYGNS*EPREEA
Trigger: TGCCTCCTCACGCGGCTCCCAACTATTCCCGTAGCT...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp GATTGGAGTAGGAATGTATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGGGACAGCTTCTGCAGTaGCCGGCGCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DWSRNVCKCSQQNKLHSQGQLLQ*PAPPAA
Trigger: AGCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCC...CTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATACATTCCTACTCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTAGTGGGACTGAGGCTTaGCCGGCAGGAGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGSGTEA*PAGGAA
Trigger: AGCAGCGCCTCCTGCCGGCCAAGCCTCAGTCCCACT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAATGCTTCAACTCCTGGTaGCCCGAAGAATCCACACAG +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNECFNSW*PEESTQ
Trigger: CTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCA...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGCCGGAGGCTCCAAAGTaGCGGTGGAGTTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKPEAPK*RWSCHP
Trigger: AGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGG...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACCTGTCAGATTCCTATaGGGCATGGTGAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQPVRFL*GMVREG
Trigger: ACCTTCTCTCACCATGCCCCATAGGAATCTGACAGG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGCTGTCCCACGGTGGGTaGAGTGATCACTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLLSHGG*SDHLAT
Trigger: AGTCGCCAAGTGATCACTCCACCCACCGTGGGACAG...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTGGAACTTATTGCTTCTaGGAAGGGCCCCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: KDKVHEATTFACQPQHSLGTYCF*EGPRVG
Trigger: ACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCC...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGGCCGCCGAAGTAGCTaGCGAACACCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGGRRSS*RTPPPP
Trigger: TGGTGGTGGTGGTGTTCGTCAGCTACTTCGGCGGCC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGTGGAGTTGCCACCCTaGCACAGGCCGTCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKVELPP*HRPSLG
Trigger: CCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCAC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTCTTCCACCAGTTTCCAATaGAACGAGGGTCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: VCAAHWIPFCRPVSSWNSSTSFQ*NEGHSG
Trigger: ACCAGAATGACCCTCGTTTCATTGGAAACTGGTGGA...AGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR TCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAATCCTATGGGGCATGGTaGGAGAAGGTCCTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNESYGAW*EKVLLY
Trigger: ATACAACAGGACCTTCTCTCACCATGCCCCATAGGA...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTCTCTTGGACAGCTTCTaGAGTGGCCGGCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGLLDSF*SGRRLQ
Trigger: CTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAG...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp TATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCTCTCCAGGCACCTTCTCTCCTaGAGCATGGCCAAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: YASVRNKTNCIPSAKGLSRHLLS*SMAKAE
Trigger: CTCCGCCTTGGCCATGCTCCAGGAGAGAAGGTGCCT...GGAGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CCA 90 bp GGAATGTATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTGACACAGGCCGTCGTTaGGGGCCGAGGCGTTCAACT +
Preference number: 4 (lower is better)
Translates to: GMYASVRNKTNCIPSAKGDTGRR*GPRRST
Trigger: AGTTGAACGCCTCGGCCCCCAACGACGGCCTGTGTC...ACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATACATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGACACAGGCCGTCGTTaGGGGCCGAGGCGTTCAACT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGDTGRR*GPRRST
Trigger: AGTTGAACGCCTCGGCCCCCAACGACGGCCTGTGTC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp CGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGATCACTTGGCGACTTTaGACACAGGTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: RHVVLPARTLHTTFLLPEITWRL*TQVHSV
Trigger: TACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGAT...CTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATTCCCAGTGACTTTGTaGGCCCGTAGAGCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQFPVTL*ARRAKE
Trigger: TTCTTTAGCTCTACGGGCCCACAAAGTCACTGGGAA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CAA 72 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTaGCTAACCGTGTACCTCAGCCTGTACCGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMV*LTVYLSLYRRG
Trigger: TCCCCTACGGTACAGGCTGAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGCGCGCGGTACTGCGATaGGCCCTACTCGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLRAVLR*ALLGVP
Trigger: AGGGACGCCGAGTAGGGCTCATCGCAGTACCGCGCG...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGGCCGCCGAAGTAGCTaGCGAACACCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKGRRSS*RTPPPP
Trigger: TGGTGGTGGTGGTGTTCGTCAGCTACTTCGGCGGCC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGGGGGCGAGATGAAGTaGGGTAAGGCGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGGGEMK*GKAKRA
Trigger: AGCCCTCTTCGCCTTACCTCACTTCATCTCGCCCCC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATCATTCTGGTCAAGGTaGACAGGATTTCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQSFWSR*TGFLGS
Trigger: TGATCCCAGAAATCCTGTTCACCTTGACCAGAATGA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR TCA 90 bp CGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGGTATGTAATTCCATCTaGTCCACAGACTGGCTCATA +
Preference number: 4 (lower is better)
Translates to: RHVVLPARTLHTTFLLPEVCNSI*STDWLI
Trigger: TATGAGCCAGTCTGTGGATCAGATGGAATTACATAC...CTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGCCACGGTGGGTGGAGTaGTCACTTGGCGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKPRWVE*SLGDFG
Trigger: TCCAAAGTCGCCAAGTGATCACTCCACCCACCGTGG...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTGGCTCTCAGTCTTGTTaGGGTATCCAGCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPGSQSC*GIQPSM
Trigger: CATTGAGGGCTGGATACCTCAACAAGACTGAGAGCC...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR GCA 90 bp CCATCTGATCCACAGACTGGCTCATACTCGTGTATTTTACAACCACAATTAACGCTGCGAGGCGCCCAGTaGATCCTGATCACAGACACG +
Preference number: 4 (lower is better)
Translates to: PSDPQTGSYSCILQPQLTLRGAQ*ILITDT
Trigger: CGTGTCTGTGATCAGGATGCACTGGGCGCCTCGCAG...CGTTAATTGTGGTTGTAAAATACACGAGTATGAGCCAGTCTGTGGATCAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR GCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAACGGGTTCGGGCCTTaGTTCAACTCCTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: INTTEMGTNLAERLLLGENGFGP*FNSWWP
Trigger: GGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTT...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp TCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTTATCACAAGAAACATTaGAATGGCACAAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SGHCRGVPLSHSRCSGEIYHKKH*NGTKEE
Trigger: TTCCTCCTTTGTGCCATTGCAATGTTTCTTGTGATA...AATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR GCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCACACCACATTCCTGTTaGCAGAGCATGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLTPHSC*QSMQVV
Trigger: CACCACCTGCATGCTCTGGCAACAGGAATGTGGTGT...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR GCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCTCCCAGCAAGAACCCTaGACACCACATTCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLSQQEP*TPHSCC
Trigger: GCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGA...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR GCA 90 bp CAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCAAGGGGAAATTCTCTCTaGCTCCGCCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QNTQNETTSRCTPSKNPARGNSL*LRLCSP
Trigger: TGGACTGCAGAGGCGGAGGCAGAGAGAATTTCCCCT...TGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGCACTGGATCCCTTTTTaGAGGCCAGTCTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLHWIPF*RPVSSW
Trigger: CCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTG...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGGCTCGCACCTCTCTTaGACAGCTTCTGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGGSHLS*TASAVA
Trigger: GGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAACTGAGGTCCACCCTGTaGTTACAGTCCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKLRSTL*LQSPSP
Trigger: GGGGCTCGGGGACTGTAACCACAGGGTGGACCTCAG...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTTCTCTCCTGGAGCATaGCCAAGGCGGAGGACACCG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGFSPGA*PRRRTP
Trigger: CGGTGTCCTCCGCCTTGGCCATGCTCCAGGAGAGAA...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTAGGCACCTTCTCTCCTaGAGCATGGCCAAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGRHLLS*SMAKAE
Trigger: CTCCGCCTTGGCCATGCTCCAGGAGAGAAGGTGCCT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAATGATAGCTGATGGTTaGGCACATGCTGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQMIADG*AHAVMK
Trigger: CTTCATCACAGCATGTGCCCAACCATCAGCTATCAT...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp GATTGGAGTAGGAATGTATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGGCGCCCAGTGCATCCTaGTCACAGACACGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: DWSRNVCKCSQQNKLHSQAPSAS*SQTRLQ
Trigger: TTGAAGCCGTGTCTGTGATCAGGATGCACTGGGCGC...CTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATACATTCCTACTCCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAAGCAACGGGAATCCGTaGGGACCACGTAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKSNGNP*GPRRGT
Trigger: GGTGCCTCTACGTGGTCCTCACGGATTCCCGTTGCT...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGTGGGACTTTTCCCAGTaGCTTTGTGGGCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKWDFSQ*LCGPVE
Trigger: CTCTACGGGCCCACAAAGTCACTGGGAAAAGTCCCA...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAACGGGCTGCAGTCCAGTaGCTTCGTCCATGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKRAAVQ*LRPWRL
Trigger: TAAGCGCCATGGACGAAGGCACTGGACTGCAGCCCG...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCAAGTGGCGGTGGAGTTaGCACCCTGACACAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VNHISSGDKGKPEEKNISKWRWS*HPDTGR
Trigger: ACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTT...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAAAGTGGCGGTGGAGTTaGCACCCTGACACAGGCCGT +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKKWRWS*HPDTGR
Trigger: ACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTT...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp CGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGGTAAAGACACACCACTaGAGATCATTGCTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: RHVVLPARTLHTTFLLPEVKTHH*RSLLVL
Trigger: CAAAACTAGCAATGATCTGCAGTGGTGTGTCTTTAC...CTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAAAACTGCATTCCCAGTaGAAAAGGTCTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEKLHSQ*KRSLLI
Trigger: GATGAGGAGAGACCTTTTGCACTGGGAATGCAGTTT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACGCAACAAAACAAACTaGATTCCCAGTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQRNKTN*IPSAKG
Trigger: ACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp CCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCGCAACAAAACAAACTaGATTCCCAGTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PVSSWNSPWVLKAGQDLVRNKTN*IPSAKG
Trigger: ACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCG...GACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR GCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGCTCTGCCTCCGCCTCTaGAGTCCATCCTCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKLCLRL*SPSSLY
Trigger: ATACAAGGAGGATGGACTGCAGAGGCGGAGGCAGAG...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGAGGGGAAATTCTCTCTaGCTCCGCCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKRGNSL*LRLCSP
Trigger: TGGACTGCAGAGGCGGAGGCAGAGAGAATTTCCCCT...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAACCCCGGGTAGGTCTGTaGTGCGCACTGGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKPRVGL*CALDPF
Trigger: AAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGG...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTCGCAGAGGAACTTATTaGTTCTGGGAAGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGRRGTY*FWEGPR
Trigger: CCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGCTGACATTTCCAAGTaGATGCCACTAAAGGTAACA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQADISK*MPLKVT
Trigger: TGTTACCTTTAGTGGCATGCACTTGGAAATGTCAGC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGCCCGAGGCTTGGGCTTaGCTCCTGCTCCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQPEAWA*LLLLGA
Trigger: TGCACCCAGGAGCAGGAGGCAAGCCCAAGCCTCGGG...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACAGTGCCTTCGTCCATaGCGCTTAGAATTCAGATTT +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEQCLRP*RLEFRF
Trigger: AAATCTGAATTCTAAGCGCCATGGACGAAGGCACTG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGGCTCGCACCTCTCTTaGACAGCTTCTGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKGSHLS*TASAVA
Trigger: GGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGGCTCCAAAGTGGCGGTaGAGTTGCCACCCTGACACA +
Preference number: 4 (lower is better)
Translates to: INTTEMGTNLAERLLLGEAPKWR*SCHPDT
Trigger: TGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGC...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGCTCCAAAGTGGCGGTaGAGTTGCCACCCTGACACA +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGAPKWR*SCHPDT
Trigger: TGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCCCTGTCAGATTCCTATaGGGCATGGTGAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLPVRFL*GMVREG
Trigger: ACCTTCTCTCACCATGCCCCATAGGAATCTGACAGG...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTCTGTCCCACGGTGGGTaGAGTGATCACTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGLSHGG*SDHLAT
Trigger: AGTCGCCAAGTGATCACTCCACCCACCGTGGGACAG...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp AGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCTCTCCTCATCTGGAACTTATTGCTTCTaGGAAGGGCCCCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SVRNKTNCIPSAKGLSSSGTYCF*EGPRVG
Trigger: ACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCC...AGATGAGGAGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526750.1
3UTR CAA 72 bp AGGAAGAGAGGGAAACAGCCTTATACCCAGGAGTATTaGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RKRGKQPYTQEY*HNSTCAVKQGW
Trigger: CCAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGCTGTTTCCCTCTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CAA 72 bp TCTGGCTCCAAGTGCACCAAAGAGCGCAAGCTGGAATaGTGGACTGAAGAAGAATTTTCTTGGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SGSKCTKERKLE*WTEEEFSWWLV
Trigger: CACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTCTTTGGTGCACTTGGAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CAA 72 bp GCCAAACCAAAATACACAAAACGAAACGACGTCACGTaGTACTCCCAGCAAGAACCCTGCACACCACATTCC +
Preference number: 4 (lower is better)
Translates to: AKPKYTKRNDVT*YSQQEPCTPHS
Trigger: GGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACACGGCACCCTCGGGAGTaGAGCTGCCGACTAGCGAGT +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTRHPRE*SCRLAS
Trigger: ACTCGCTAGTCGGCAGCTTCACTCCCGAGGGTGCCG...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGGGCCGCCGAAGTAGCTaGCGAACACCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQGRRSS*RTPPPP
Trigger: TGGTGGTGGTGGTGTTCGTCAGCTACTTCGGCGGCC...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTTCCACCAGTTTCCAATaGAACGAGGGTCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPSTSFQ*NEGHSG
Trigger: ACCAGAATGACCCTCGTTTCATTGGAAACTGGTGGA...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCCTCTTGGTAGGTCTCTaGCATCCTTTCCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLLLVGL*HPFQIP
Trigger: TGGGATTTGGAAAGGATGTCAGAGACCTACCAAGAG...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGTGTTGCTTAAGATCCTaGCAGCTGCTCTTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLCCLRS*QLLLVG
Trigger: ACCTACCAAGAGCAGCTGTCAGGATCTTAAGCAACA...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAAATAACCACACGGAGCTaGCTTCGCTGTCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKITTRS*LRCPTV
Trigger: CACCGTGGGACAGCGAAGTCAGCTCCGTGTGGTTAT...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp CTCTCCTCATCTTCTACGGACCTGAGTGTTACTATGATAGCTGATGGTTGGGCAGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACT +
Preference number: 4 (lower is better)
Translates to: LSSSSTDLSVTMIADGWAVSSPQ*IAAVYT
Trigger: AGTATACACAGCCGCTATTCATTGAGGGCTGGATAC...TGCCCAACCATCAGCTATCATAGTAACACTCAGGTCCGTAGAAGATGAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR GCA 90 bp AAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACCACTGCAGGGCCAAGTaGTCCCATGACATACATGAT +
Preference number: 4 (lower is better)
Translates to: KIHKTKRRHVVLPARTLHHCRAK*SHDIHD
Trigger: ATCATGTATGTCATGGGAGCACTTGGCCCTGCAGTG...GTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGTAAAGACACACCACTaGAGATCATTGCTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQVKTHH*RSLLVL
Trigger: CAAAACTAGCAATGATCTGCAGTGGTGTGTCTTTAC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGACTTTGGACACAGGTaGATTCTGTATAATTCCGTA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQDFGHR*ILYNSV
Trigger: TACGGAATTATACAGAATGCACCTGTGTCCAAAGTC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACGCAACAAAACAAACTaGATTCCCAGTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNERNKTN*IPSAKG
Trigger: ACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTGGTGGTGTCAATGACTaGTCCAAAGTAGATTGGAGT +
Preference number: 4 (lower is better)
Translates to: KDKVHEATTFACQPQHSLGGVND*SKVDWS
Trigger: ACTCCAATCTACTTTGGAGCAGTCATTGACACCACC...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp CAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACTCTCTCACTCACGGTaGTCAGGGGAAATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QNTQNETTSRCTPSKNPALSHSR*SGEILS
Trigger: AGAGAGAATTTCCCCTGAGCACCGTGAGTGAGAGAG...TGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGTGAAGCTGCCGACCTaGAAAGCAGAAAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKVKLPT*KAERGR
Trigger: CCGCCCTCTTTCTGCTTTGCAGGTCGGCAGCTTCAC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACAGGACAGCTTCTGCAGTaGCCGGCGCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTGQLLQ*PAPPAA
Trigger: AGCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCC...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTATCACTTGGCGACTTTaGACACAGGTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: KDKVHEATTFACQPQHSLITWRL*TQVHSV
Trigger: TACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGAT...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGCTCCAAAGTAGATTaGAGTAGGAATGTATGCAAG +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQCSKVD*SRNVCK
Trigger: CTTGCATACATTCCTACTCCAATCTACTTTGGAGCA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGTCTGTGCTGCGCACTaGATCCCTTTTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGVCAAH*IPFCRP
Trigger: TGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATAACAGTCACTTCAGTTaGCTATGTAATATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHNSHFS*LCNIPV
Trigger: CACTGGAATATTACATAGCCAACTGAAGTGACTGTT...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGCCAAAGAGCGCAAGCTaGAATTGTGGACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLPKSAS*NCGLKK
Trigger: CTTCTTCAGTCCACAATTCCAGCTTGCGCTCTTTGG...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATTTTGTTCACCCCTTTaGTTTAATGTGTCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQFCSPL*FNVSLQ
Trigger: TTGCAGGGACACATTAAACCAAAGGGGTGAACAAAA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACTGTTGCTTAAGATCCTaGCAGCTGCTCTTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: KIHKTKRRHVVLPARTLHCCLRS*QLLLVG
Trigger: ACCTACCAAGAGCAGCTGTCAGGATCTTAAGCAACA...GTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR TCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTTGGGATACCAAACTGTaGCTCGATGAACTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPWDTKL*LDELGN
Trigger: ATTCCCAAGTTCATCGAGTCACAGTTTGGTATCCCA...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACAGGCACAGATTTCCTaGTATAAGTATGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQQAQIS*YKYAFS
Trigger: TGAAAATGCATACTTATATCAGGAAATCTGTGCCTG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGGCAGCCAGAACCCCTaGGCTAACTTGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKGSQNP*ANLLSI
Trigger: GATTGACAGCAAGTTAGCTCAGGGGTTCTGGCTGCC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATCTGGCACCTGATCAGTaGTCGCCAAACTGGATGACT +
Preference number: 4 (lower is better)
Translates to: FQVHATKGNNVTATKGNNLAPDQ*SPNWMT
Trigger: AGTCATCCAGTTTGGCGATCACTGATCAGGTGCCAG...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCGGTAATCAGGTAATATaGCACCTGAAGATACCTGGC +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLGNQVI*HLKIPG
Trigger: GCCAGGTATCTTCAGGTGTCATATTACCTGATTACC...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACACTCTTGGACAGCTTCTaGAGTGGCCGGCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTLLDSF*SGRRLQ
Trigger: CTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAG...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGAACGGGTTCGGGCCTTaGTTCAACTCCTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLNGFGP*FNSWWP
Trigger: GGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTT...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR GCA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATATCACAAGAAACATTaGAATGGCACAAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQYHKKH*NGTKEE
Trigger: TTCCTCCTTTGTGCCATTGCAATGTTTCTTGTGATA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAAGGGGAAATTCTCTCTaGCTCCGCCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKRGNSL*LRLCSP
Trigger: TGGACTGCAGAGGCGGAGGCAGAGAGAATTTCCCCT...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGCTCTCTCACTCACGGTaGTCAGGGGAAATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKLSHSR*SGEILS
Trigger: AGAGAGAATTTCCCCTGAGCACCGTGAGTGAGAGAG...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTCACTGGATCCCTTTTTaGAGGCCAGTCTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGHWIPF*RPVSSW
Trigger: CCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTG...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGATACCCAGGAGTATTTaGACAATTCCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLIPRSI*TIPPVQ
Trigger: CTGCACAGGTGGAATTGTGCAAATACTCCTGGGTAT...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAATATTAACACTGTGGTaGACATTTCAGGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEILTLW*TFQAHF
Trigger: GAAATGGGCCTGAAATGTGCACCACAGTGTTAATAT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAACCTCCTGCTCCTGGGTaGACTAGGGAATTCCCATCA +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKPPAPG*TREFPS
Trigger: TGATGGGAATTCCCTAGTGCACCCAGGAGCAGGAGG...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp AGCTGTTCCTTCTATCACACTATGCCTATGGTTCCTCTGAAGCATTTGAAAAACGCAACTACCTTTGCCTaGCAGCCGCAGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SCSFYHTMPMVPLKHLKNATTFA*QPQHSL
Trigger: AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGC...GTTTTTCAAATGCTTCAGAGGAACCATAGGCATAGTGTGATAGAAGGAACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp AAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACATGTAGATGCTGGCATTaGAGGCTGGGATACCAAACT +
Preference number: 4 (lower is better)
Translates to: KYTKRNDVTLYSQQEPCTCRCWH*RLGYQT
Trigger: AGTTTGGTATCCCAGCCTCCAATGCCAGCATCTACA...TGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CCA 90 bp GCCAGACAAGGGTTAAAGTATGTAATTCCATCTGATCCACAGACTGGCTCATACCCTGTCAGATTCCTATaGGGCATGGTGAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: ARQGLKYVIPSDPQTGSYPVRFL*GMVREG
Trigger: ACCTTCTCTCACCATGCCCCATAGGAATCTGACAGG...GTATGAGCCAGTCTGTGGATCAGATGGAATTACATACTTTAACCCTTGTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGGTGGAGTGATCACTTaGCGACTTTGGACACAGGTG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGGGVIT*RLWTQV
Trigger: CACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTATGATAGCTGATGGTTaGGCACATGCTGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPMIADG*AHAVMK
Trigger: CTTCATCACAGCATGTGCCCAACCATCAGCTATCAT...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAATGCTCCAAAGTAGATTaGAGTAGGAATGTATGCAAG +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNECSKVD*SRNVCK
Trigger: CTTGCATACATTCCTACTCCAATCTACTTTGGAGCA...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACCTCCTTGTATTTTATaGAGTACCAGGCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEPPCIL*STRPEK
Trigger: TTTTTCTGGCCTGGTACTCCATAAAATACAAGGAGG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGTCTGTGCTGCGCACTaGATCCCTTTTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKVCAAH*IPFCRP
Trigger: TGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTCAAAAAGACACTTTCTaGCTCCAAGTGCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: KDKVHEATTFACQPQHSLQKDTF*LQVHQR
Trigger: TCTTTGGTGCACTTGGAGCCAGAAAGTGTCTTTTTG...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GCAGCCAAACCAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAATCATTCTGGTCAAGGTaGACAGGATTTCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: AAKPKYTKRNDVTLYSQQSFWSR*TGFLGS
Trigger: TGATCCCAGAAATCCTGTTCACCTTGACCAGAATGA...TTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR TCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTCCTATGGGGCATGGTaGGAGAAGGTCCTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGSYGAW*EKVLLY
Trigger: ATACAACAGGACCTTCTCTCACCATGCCCCATAGGA...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR TCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGCTCCTGTATTCTAAGTaGTTTTCATATCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLLLYSK*FSYPRH
Trigger: GTGCCTGGGATATGAAAATCACTTAGAATACAGGAG...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGACCAAGAGAACTGTTTaGCCAATGTCATTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLTKRTV*PMSFLG
Trigger: TCCTAGGAATGACATTGGTCAAACAGTTCTCTTGGT...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATAAGATACCTGGCACCTaGTCAGTGATCGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: FQVHATKGNNVTATKGNNKIPGT*SVIAKL
Trigger: CAGTTTGGCGATCACTGATCAGGTGCCAGGTATCTT...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGGCCCCAAGTATTTTGTaGACCACTCTTAATTGGTAC +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLAPSIL*TTLNWY
Trigger: GTACCAATTAAGAGTGGTTCACAAAATACTTGGGGC...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTAACAGGAGAATCACTTaGACCCAGGAAGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGNRRIT*TQEAEV
Trigger: AACCTCCGCTTCCTGGGTTCAAGTGATTCTCCTGTT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACACTGCGAGGCGCCCAGTaGATCCTGATCACAGACACG +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTLRGAQ*ILITDT
Trigger: CGTGTCTGTGATCAGGATGCACTGGGCGCCTCGCAG...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATCACTGCAGGGCCAAGTaGTCCCATGACATACATGAT +
Preference number: 4 (lower is better)
Translates to: FQVHATKGNNVTATKGNNHCRAK*SHDIHD
Trigger: ATCATGTATGTCATGGGAGCACTTGGCCCTGCAGTG...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTCACTGCAGGGCCAAGTaGTCCCATGACATACATGAT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGHCRAK*SHDIHD
Trigger: ATCATGTATGTCATGGGAGCACTTGGCCCTGCAGTG...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR GCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATCTCTCTCACTCACGGTaGTCAGGGGAAATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FQVHATKGNNVTATKGNNLSHSR*SGEILS
Trigger: AGAGAGAATTTCCCCTGAGCACCGTGAGTGAGAGAG...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTCTCTCTCACTCACGGTaGTCAGGGGAAATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGLSHSR*SGEILS
Trigger: AGAGAGAATTTCCCCTGAGCACCGTGAGTGAGAGAG...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGCACAATTCCACCTGTaGAGTCAAGCAAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGAQFHL*SQARLE
Trigger: CTCCAACCTTGCTTGACTGCACAGGTGGAATTGTGC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAAAGTGCTTGTCAAAATaGTCTACAAATCGTCAACAC +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEKCLSK*STNRQH
Trigger: GTGTTGACGATTTGTAGAGCATTTTGACAAGCACTT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAATGCTTCAACTCCTGGTaGCCCGAAGAATCCACACAG +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKCFNSW*PEESTQ
Trigger: CTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCA...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GCAGCCAAACCAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAATCACTTGGCGACTTTaGACACAGGTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: AAKPKYTKRNDVTLYSQQITWRL*TQVHSV
Trigger: TACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGAT...TTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTACACCTGAAGATACCTaGCACCTGATCAGTGATCGC +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGTPEDT*HLISDR
Trigger: GCGATCACTGATCAGGTGCCAGGTATCTTCAGGTGT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
3UTR CAA 72 bp CTGGAATTGTGGACTGAAGAAGAATTTTCTTGGTGGTaGGTGAACATGGAGGACCACCATGACATCCATGAG +
Preference number: 4 (lower is better)
Translates to: LELWTEEEFSWW*VNMEDHHDIHE
Trigger: CTCATGGATGTCATGGTGGTCCTCCATGTTCACCAACCACCAAGAAAATTCTTCTTCAGTCCACAATTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTCCACCAGTTTCCAATaGAACGAGGGTCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGSTSFQ*NEGHSG
Trigger: ACCAGAATGACCCTCGTTTCATTGGAAACTGGTGGA...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR TCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGVSSPQ*IAAVYT
Trigger: AGTATACACAGCCGCTATTCATTGAGGGCTGGATAC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGGGGAACAAATCTAGCTaGACGTCTCCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: INTTEMGTNLAERLLLGEGNKSS*TSPSWR
Trigger: TCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCC...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAATGGAGAGCAGAAGCCTaGATCATGGAACAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKWRAEA*IMEQSV
Trigger: GACAGACTGTTCCATGATTCAGGCTTCTGCTCTCCA...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAATTTCTTGGTGGTTGGTaGACATGGAGGACCACCATG +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKFLGGW*TWRTTM
Trigger: CATGGTGGTCCTCCATGTTCACCAACCACCAAGAAA...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTAGATGGAGTAACTGTTaGAATGAGAGTAATGGATGC +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPRWSNC*NESNGC
Trigger: GCATCCATTACTCTCATTTCAACAGTTACTCCATCT...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGGTAAAGACACACCACTaGAGATCATTGCTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLVKTHH*RSLLVL
Trigger: CAAAACTAGCAATGATCTGCAGTGGTGTGTCTTTAC...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAAGACAAATTCATTTGTaGTTTGTAGCAGAACTCACA +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNERQIHL*FVAELT
Trigger: TGTGAGTTCTGCTACAAAGCACAAATGAATTTGTCT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR GCA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTAAAACCACACAGATTTaGCAGTGCTTTCAAGATGTA +
Preference number: 4 (lower is better)
Translates to: KDKVHEATTFACQPQHSLKTTQI*QCFQDV
Trigger: TACATCTTGAAAGCACTGGCAAATCTGTGTGGTTTT...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTAATACTTCCAATATATaGCACATTGGCCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPNTSNI*HIGQSL
Trigger: CAGACTCTGGCCAATGTGGCATATATTGGAAGTATT...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGAGACCATTAACGCCTaGATGAAGGTCAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGETINA*MKVRKH
Trigger: GTGCTTTCTGACCTTCATCCAGGCGTTAATGGTCTC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAGTTTTGCAGATTCTCTaGCACCAAGTTTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: ERSGERLSVLLRYPALNEVLQIL*HQVSIF
Trigger: AAAAATTGAAACTTGGTGCCAGAGAATCTGCAAAAC...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR CCA 90 bp AGATTACCACTATTAACACAGCCAGCCAGACAAGGGTTAAAGTATGTAATTCCAGGTGGAGTGATCACTTaGCGACTTTGGACACAGGTG +
Preference number: 4 (lower is better)
Translates to: RLPLLTQPARQGLKYVIPGGVIT*RLWTQV
Trigger: CACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACC...TGGAATTACATACTTTAACCCTTGTCTGGCTGGCTGTGTTAATAGTGGTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACACTGGGTGCTGAAAGCTaGGCAAGATCTAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTLGAES*ARSSPG
Trigger: GCCCGGACTAGATCTTGCCCAGCTTTCAGCACCCAG...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGACAATATTAACACTGTaGTGCACATTTCAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLTILTL*CTFQAH
Trigger: ATGGGCCTGAAATGTGCACCACAGTGTTAATATTGT...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAACTCTTGGTAGGTCTCTaGCATCCTTTCCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKLLVGL*HPFQIP
Trigger: TGGGATTTGGAAAGGATGTCAGAGACCTACCAAGAG...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGGTATGTAATTCCATCTaGTCCACAGACTGGCTCATA +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKVCNSI*STDWLI
Trigger: TATGAGCCAGTCTGTGGATCAGATGGAATTACATAC...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR TCA 90 bp TGTATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCTCTTGTTACTATGATAGCTaGTGGTTGGGCACATGCTGT +
Preference number: 4 (lower is better)
Translates to: CMQVFATKQTAFPVQKVSCYYDS*WLGTCC
Trigger: ACAGCATGTGCCCAACCATCAGCTATCATAGTAACA...AGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR TCA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCGGGAACAAATCTAGCTaGACGTCTCCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VNHISSGDKGKPEEKNISGNKSS*TSPSWR
Trigger: TCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCC...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGGTGGTGTCAATGACTaGTCCAAAGTAGATTGGAGT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGGGVND*SKVDWS
Trigger: ACTCCAATCTACTTTGGAGCAGTCATTGACACCACC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTTGCTATGGCTTAAAATaGTATCAACAGTACTGGATG +
Preference number: 4 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPCYGLK*YQQYWM
Trigger: CATCCAGTACTGTTGATAGCATTTTAAGCCATAGCA...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAAGAGACCATTAACGCCTaGATGAAGGTCAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKETINA*MKVRKH
Trigger: GTGCTTTCTGACCTTCATCCAGGCGTTAATGGTCTC...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp AGCTGTTCCTTCTATCACACTATGCCTATGGTTCCTCTGAAGCATTTGAAAAACTGTAGATGCTGGCATTaGAGGCTGGGATACCAAACT +
Preference number: 4 (lower is better)
Translates to: SCSFYHTMPMVPLKHLKNCRCWH*RLGYQT
Trigger: AGTTTGGTATCCCAGCCTCCAATGCCAGCATCTACA...GTTTTTCAAATGCTTCAGAGGAACCATAGGCATAGTGTGATAGAAGGAACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp GCAGCCAAACCAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAACTAAAAACTTTGATTTaGAAATGCCAAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AAKPKYTKRNDVTLYSQQLKTLI*KCQVLG
Trigger: GCCCAGGACTTGGCATTTCCAAATCAAAGTTTTTAG...TTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGTGCTATCAACAGTACTaGATGGAAAGTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKCYQQY*MESSAS
Trigger: GGAAGCTGAACTTTCCATCCAGTACTGTTGATAGCA...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATCTCTTTATCTTAGGATaGGGCAGGCAGACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: FQVHATKGNNVTATKGNNLFILG*GRQTER
Trigger: TCTTTCAGTCTGCCTGCCCCATCCTAAGATAAAGAG...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGAATTATATCAGCATTTaGCCCTTACACTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKNYISI*PLHSLA
Trigger: TGCCAGGGAGTGTAAGGGCCAAATGCTGATATAATT...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGTTCAGATTTGATAGCTaGTGGCACCCAAGCACTCCG +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQFRFDS*WHPSTP
Trigger: CGGAGTGCTTGGGTGCCATCAGCTATCAAATCTGAA...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGGAATCTGCGCGCAAATaGATAAAGCCACGTAGACCC +
Preference number: 4 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLESARK*IKPRRP
Trigger: GGGTCTACGTGGCTTTATTCATTTGCGCGCAGATTC...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp AGCTGTTCCTTCTATCACACTATGCCTATGGTTCCTCTGAAGCATTTGAAAAACTCATTCTGGTCAAGGTaGACAGGATTTCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: SCSFYHTMPMVPLKHLKNSFWSR*TGFLGS
Trigger: TGATCCCAGAAATCCTGTTCACCTTGACCAGAATGA...GTTTTTCAAATGCTTCAGAGGAACCATAGGCATAGTGTGATAGAAGGAACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCTGGGATACCAAACTGTaGCTCGATGAACTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: VNHISSGDKGKPEEKNISWDTKL*LDELGN
Trigger: ATTCCCAAGTTCATCGAGTCACAGTTTGGTATCCCA...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAATGTTACTATGATAGCTaGTGGTTGGGCACATGCTGT +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKCYYDS*WLGTCC
Trigger: ACAGCATGTGCCCAACCATCAGCTATCATAGTAACA...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAATGTGTCCTACGACCTaGAGTAGCTGTTCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKMCPTT*SSCSFY
Trigger: ATAGAAGGAACAGCTACTTCAGGTCGTAGGACACAT...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGGATCGCCAAACTGGATaGCTGTTCATGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQDRQTG*LFMAAK
Trigger: CTTTGCTGCCATGAACAGTCATCCAGTTTGGCGATC...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGTCAGGCCCATTTCTTTaGGTTCTGGCCCAATCATCC +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQSGPFL*VLAQSS
Trigger: GGATGATTGGGCCAGAACTCAAAGAAATGGGCCTGA...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACACCCTTCTCTGAAGGCTaGCATTTCCAAGTGCATGCC +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTPFSEG*HFQVHA
Trigger: GGCATGCACTTGGAAATGTCAGCCTTCAGAGAAGGG...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACAAGGTCAGAAAGCACATaGACACCAGGAAGCAACGGG +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTRSEST*TPGSNG
Trigger: CCCGTTGCTTCCTGGTGTGCATGTGCTTTCTGACCT...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGGACTTTGGACACAGGTaGATTCTGTATAATTCCGTA +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKDFGHR*ILYNSV
Trigger: TACGGAATTATACAGAATGCACCTGTGTCCAAAGTC...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR GCA 90 bp GCCAGACAAGGGTTAAAGTATGTAATTCCATCTGATCCACAGACTGGCTCATACGACTTTGGACACAGGTaGATTCTGTATAATTCCGTA +
Preference number: 4 (lower is better)
Translates to: ARQGLKYVIPSDPQTGSYDFGHR*ILYNSV
Trigger: TACGGAATTATACAGAATGCACCTGTGTCCAAAGTC...GTATGAGCCAGTCTGTGGATCAGATGGAATTACATACTTTAACCCTTGTCTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR GCA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCTTAACACAAACTGTATaGAACCAAGAGAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLLTQTV*NQENCL
Trigger: CAAACAGTTCTCTTGGTTGCATACAGTTTGTGTTAA...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCGGGAATTCCCATCAATaGTTCAGCTCCATCCAAACT +
Preference number: 4 (lower is better)
Translates to: VNHISSGDKGKPEEKNISGNSHQ*FSSIQT
Trigger: AGTTTGGATGGAGCTGAAGCATTGATGGGAATTCCC...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACATGCTTCAACTCCTGGTaGCCCGAAGAATCCACACAG +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTCFNSW*PEESTQ
Trigger: CTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCA...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACACCTTGCTTCAACTCCTaGTGGCCCGAAGAATCCACA +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTPCFNS*WPEEST
Trigger: TGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGG...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAATCACTTGGCGACTTTaGACACAGGTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKITWRL*TQVHSV
Trigger: TACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGAT...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGCCTCCTTGTATTTTATaGAGTACCAGGCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKPPCIL*STRPEK
Trigger: TTTTTCTGGCCTGGTACTCCATAAAATACAAGGAGG...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTATCACAAAATATAATTaGCTACCACCCGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGITKYN*LPPEAW
Trigger: CCAAGCCTCGGGTGGTAGCCAATTATATTTTGTGAT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAAATGCAACAAGAAGTTTaGGACAGATACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKMQQEV*DRYSQQ
Trigger: CTGCTGGCTGTATCTGTCCCAAACTTCTTGTTGCAT...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGTATGTAATTCCATCTaGTCCACAGACTGGCTCATA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKVCNSI*STDWLI
Trigger: TATGAGCCAGTCTGTGGATCAGATGGAATTACATAC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR TCA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGGTATCCAGCCCTCAATaGATAGCGGCTGTGTATACT +
Preference number: 4 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLVSSPQ*IAAVYT
Trigger: AGTATACACAGCCGCTATTCATTGAGGGCTGGATAC...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCGCTGGAATTGTGGACTaGAGAAGAATTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VNHISSGDKGKPEEKNISAGIVD*RRIFLV
Trigger: CACCAAGAAAATTCTTCTTCAGTCCACAATTCCAGC...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGACTTTGGACACAGGTaGATTCTGTATAATTCCGTA +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGDFGHR*ILYNSV
Trigger: TACGGAATTATACAGAATGCACCTGTGTCCAAAGTC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR GCA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCCTCTCTCAGAATCACTaGCAGAAACTTACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: VNHISSGDKGKPEEKNISLSQNH*QKLTVR
Trigger: CCTTACTGTAAGTTTCTGGCAGTGATTCTGAGAGAG...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTACTTCAAAGTGATGTaGTGGGAGGTACTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGYFKVM*WEVLKR
Trigger: TCTTTTCAGTACCTCCCAGCACATCACTTTGAAGTA...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTAGCTACCAGAAAAAGTaGCAATCCCACCAAAATTCT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGSYQKK*QSHQNS
Trigger: AGAATTTTGGTGGGATTGGCACTTTTTCTGGTAGCT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp GCAGCCAAACCAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGTTTTGCAGATTCTCTaGCACCAAGTTTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: AAKPKYTKRNDVTLYSQQVLQIL*HQVSIF
Trigger: AAAAATTGAAACTTGGTGCCAGAGAATCTGCAAAAC...TTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGGGAAATGCCAAGTCCTaGGCAAGCTCACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQGNAKS*ASSPLF
Trigger: AAACAAAGGTGAGCTTGCCCAGGACTTGGCATTTCC...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTTCAAAGTGATGTGCTaGGAGGTACTGAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGFKVMC*EVLKRM
Trigger: CATTCTTTTCAGTACCTCCCAGCACATCACTTTGAA...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAACAGAAGCCTGAATCATaGAACAGTCTGTCAATCACA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKQKPES*NSLSIT
Trigger: TGTGATTGACAGACTGTTCCATGATTCAGGCTTCTG...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGAAGAATTTTCTTGGTaGTTGGTGAACATGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKEEFSW*LVNMED
Trigger: GTCCTCCATGTTCACCAACCACCAAGAAAATTCTTC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGTGTTACTATGATAGCTaGTGGTTGGGCACATGCTGT +
Preference number: 4 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLCYYDS*WLGTCC
Trigger: ACAGCATGTGCCCAACCATCAGCTATCATAGTAACA...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR TCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAAGTGCTGTGTCATCTCTaGTGTTTTAAGTACATACAC +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKVLCHL*CFKYIH
Trigger: GTGTATGTACTTAAAACATCAGAGATGACACAGCAC...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGAAAAGAGTCAGAGCCTaGCTTGCCTGTTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQKRVRA*LACFRI
Trigger: AATCCTGAAACAGGCAAGTCAGGCTCTGACTCTTTT...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGGACAAAAAGATAAAGTaGATGAGGCAACTACCTTTG +
Preference number: 4 (lower is better)
Translates to: INTTEMGTNLAERLLLGEDKKIK*MRQLPL
Trigger: CAAAGGTAGTTGCCTCATGCACTTTATCTTTTTGTC...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCCAAACACAAAGTACATaGAGCCACTTAGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: VNHISSGDKGKPEEKNISQTQST*SHLAVK
Trigger: TTTCACTGCTAAGTGGCTGCATGTACTTTGTGTTTG...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTTCACGCTTCATTTTTaGAGCATAGATGGAGTAACT +
Preference number: 4 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGFTLHF*SIDGVT
Trigger: AGTTACTCCATCTATGCTGCAAAAATGAAGCGTGAA...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAACCTCCTTGTATTTTATaGAGTACCAGGCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKPPCIL*STRPEK
Trigger: TTTTTCTGGCCTGGTACTCCATAAAATACAAGGAGG...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CCA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGTCTAAAGTTTCTCTTTaGTACATGCACGGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: INTTEMGTNLAERLLLGESKVSL*YMHGFY
Trigger: GTAGAAACCGTGCATGTACCAAAGAGAAACTTTAGA...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAATATCACAAGAAACATTaGAATGGCACAAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKYHKKH*NGTKEE
Trigger: TTCCTCCTTTGTGCCATTGCAATGTTTCTTGTGATA...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR GCA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATAGACAAATTCATTTGTaGTTTGTAGCAGAACTCACA +
Preference number: 4 (lower is better)
Translates to: FQVHATKGNNVTATKGNNRQIHL*FVAELT
Trigger: TGTGAGTTCTGCTACAAAGCACAAATGAATTTGTCT...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGTCATTTCAGAAACTCTaGCGAGACCCGATGTTAACA +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQSFQKL*RDPMLT
Trigger: TGTTAACATCGGGTCTCGGCAGAGTTTCTGAAATGA...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAATTTCTCTTTGGTACATaGACGGTTTCTACAAAACAG +
Preference number: 4 (lower is better)
Translates to: SESLPETYSKGESKGSVKFLFGT*TVSTKQ
Trigger: CTGTTTTGTAGAAACCGTGCATGTACCAAAGAGAAA...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACAACATTGGCCAGAGTCTaGCAATTACCAGTGCAATTA +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTTLARV*QLPVQL
Trigger: TAATTGCACTGGTAATTGTCAGACTCTGGCCAATGT...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGCCAAAACAAGTAATTTaGAGCCTAAGCTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQPKQVI*SLSSWR
Trigger: TCTCCATGAGCTTAGGCTTCAAATTACTTGTTTTGG...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGCTAAAAACTTTGATTTaGAAATGCCAAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLLKTLI*KCQVLG
Trigger: GCCCAGGACTTGGCATTTCCAAATCAAAGTTTTTAG...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CCA 90 bp AGCTGTTCCTTCTATCACACTATGCCTATGGTTCCTCTGAAGCATTTGAAAAACTTAACATTTGGGGTTTaGGGTAGAGGTATGTATTTT +
Preference number: 4 (lower is better)
Translates to: SCSFYHTMPMVPLKHLKNLTFGV*GRGMYF
Trigger: AAAATACATACCTCTACCCCAAACCCCAAATGTTAA...GTTTTTCAAATGCTTCAGAGGAACCATAGGCATAGTGTGATAGAAGGAACAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACATGCTCCAAAGTAGATTaGAGTAGGAATGTATGCAAG +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTCSKVD*SRNVCK
Trigger: CTTGCATACATTCCTACTCCAATCTACTTTGGAGCA...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR TCA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACAAAGCTATCAGATTTATaGTTCAGCAGCCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTKLSDL*FSSLFI
Trigger: GATAAAGAGGCTGCTGAATCATAAATCTGATAGCTT...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR GCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGACACAGATTTGCCAGTaGTTTCAAGATGTAACTAAA +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQTQICQ*FQDVTK
Trigger: TTTAGTTACATCTTGAAAGCACTGGCAAATCTGTGT...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CCA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGGTTTTGCAGATTCTCTaGCACCAAGTTTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: RKSANPTKILSMQYLNDQVLQIL*HQVSIF
Trigger: AAAAATTGAAACTTGGTGCCAGAGAATCTGCAAAAC...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp CTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCATCTCCGGGCGGTAGCTaGAGGCAGGCGCCTCGCGCG +
Preference number: 5 (lower is better)
Translates to: LQEGGSKAAGLSSSPGSASPGGS*RQAPRA
Trigger: CGCGCGAGGCGCCTGCCTCAAGCTACCGCCCGGAGA...TGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS CCA 90 bp CAGCATCCCACCTCGCTGCGCCAGGGGTACCGGGTGTTCGCCGCCTaGGCTCGCGGCACCCTCGGGAGTGAAGCTGCCGACCGGCGTACT +
Preference number: 5 (lower is better)
Translates to: QHPTSLRQGYRVFAA*ARGTLGSEAADRRT
Trigger: AGTACGCCGGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGAACACCCGGTACCCCTGGCGCAGCGAGGTGGGATGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524703.1
CDS CCA 90 bp CAGCATCCCACCTCGCTGCGCCAGGGGTACCGGGTGTTCGCCGCCTaGGCTCGCGGCACCCTCGGGAGTGAAGCTGCCGACCAGGGGCAT +
Preference number: 5 (lower is better)
Translates to: QHPTSLRQGYRVFAA*ARGTLGSEAADQGH
Trigger: ATGCCCCTGGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGAACACCCGGTACCCCTGGCGCAGCGAGGTGGGATGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532388.5
CDS CCA 90 bp CAGCATCCCACCTCGCTGCGCCAGGGGTACCGGGTGTTCGCCGCCTaGGCTCGCGGCACCCTCGGGAGTGAAGCTGCCGACCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: QHPTSLRQGYRVFAA*ARGTLGSEAADLAA
Trigger: AGCTGCCAGGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGAACACCCGGTACCCCTGGCGCAGCGAGGTGGGATGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531422.1
CDS GCA 90 bp CAGGGCCGCGCAGCAGGGCATCCTCACCAGCTGCGAGGCGCCCAGTaGATCCTGATCACAGACACGGCTTCAAGGCTCCGCAGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: QGRAAGHPHQLRGAQ*ILITDTASRLRSRV
Trigger: CACGCGGCTGCGGAGCCTTGAAGCCGTGTCTGTGATCAGGATGCACTGGGCGCCTCGCAGCTGGTGAGGATGCCCTGCTGCGCGGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS GCA 90 bp TCGCACCTCTCTTGGACAGCTTCTGCAGTGGCCGGCGCCTCCAGCTaGTCTCCCGCCCCGGGCTGCAGTCCAGTGCCTTCGTCCATGGCG +
Preference number: 5 (lower is better)
Translates to: SHLSWTASAVAGASS*SPAPGCSPVPSSMA
Trigger: CGCCATGGACGAAGGCACTGGACTGCAGCCCGGGGCGGGAGAGCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS GCA 90 bp CTTAGACCTGAGGGTCTCCGGCTCGCACCTCTCTTGGACAGCTTCTaGAGTGGCCGGCGCCTCCAGCTGCTCTCCCGCCCCGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LRPEGLRLAPLLDSF*SGRRLQLLSRPGLQ
Trigger: CTGCAGCCCGGGGCGGGAGAGCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCGGAGACCCTCAGGTCTAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS GCA 90 bp TCGCCGCCTGGGCTCGCGGCACCCTCGGGAGTGAAGCTGCCGACCTaGAAAGCAGAAAGAGGGCGGTCAGCGAAGAGCGGCTGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: SPPGLAAPSGVKLPT*KAERGRSAKSGCGL
Trigger: CAAGCCGCAGCCGCTCTTCGCTGACCGCCCTCTTTCTGCTTTGCAGGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS TCA 90 bp GCGCAGCAGGGCATCCTCACCAGCTGCGAGGCGCCCAGTGCATCCTaGTCACAGACACGGCTTCAAGGCTCCGCAGCCGCGTGCCACAGG +
Preference number: 5 (lower is better)
Translates to: AQQGILTSCEAPSAS*SQTRLQGSAAACHR
Trigger: CCTGTGGCACGCGGCTGCGGAGCCTTGAAGCCGTGTCTGTGATCAGGATGCACTGGGCGCCTCGCAGCTGGTGAGGATGCCCTGCTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS TCA 90 bp GGGGTACCGGGTGTTCGCCGCCTGGGCTCGCGGCACCCTCGGGAGTaGAGCTGCCGACCTGCAAAGCAGAAAGAGGGCGGTCAGCGAAGA +
Preference number: 5 (lower is better)
Translates to: GVPGVRRLGSRHPRE*SCRPAKQKEGGQRR
Trigger: TCTTCGCTGACCGCCCTCTTTCTGCTTTGCAGGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGAACACCCGGTACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS CCA 90 bp TTCCTCCCGAGTCCTTCGGACAGGCCGGAGGCTCCAAAGTGGCGGTaGAGTTGCCACCCTGACACAGGCCGTCGTTGGGGGCCGAGGCGT +
Preference number: 5 (lower is better)
Translates to: FLPSPSDRPEAPKWR*SCHPDTGRRWGPRR
Trigger: ACGCCTCGGCCCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGGCCTGTCCGAAGGACTCGGGAGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS GCA 90 bp CCGAGTCCTTCGGACAGGCCGGAGGCTCCAAAGTGGCGGTGGAGTTaGCACCCTGACACAGGCCGTCGTTGGGGGCCGAGGCGTTCAACT +
Preference number: 5 (lower is better)
Translates to: PSPSDRPEAPKWRWS*HPDTGRRWGPRRST
Trigger: AGTTGAACGCCTCGGCCCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGGCCTGTCCGAAGGACTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS TCA 90 bp TTCGGACAGGCCGGAGGCTCCAAAGTGGCGGTGGAGTTGCCACCCTaGCACAGGCCGTCGTTGGGGGCCGAGGCGTTCAACTCTTGGATC +
Preference number: 5 (lower is better)
Translates to: FGQAGGSKVAVELPP*HRPSLGAEAFNSWI
Trigger: GATCCAAGAGTTGAACGCCTCGGCCCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGGCCTGTCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS GCA 90 bp GAAGTGGACGGGGCAGAGGGACTGGGGGCCAACGGGTTCGGGCCTTaGTTCAACTCCTGGTGGCCCGAAGAATCCACACAGCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: EVDGAEGLGANGFGP*FNSWWPEESTQPKA
Trigger: GGCCTTTGGCTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTGGCCCCCAGTCCCTCTGCCCCGTCCACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 90 bp ACCGGTAAACTCTTAGACCTGAGGGTCTCCGGCTCGCACCTCTCTTaGACAGCTTCTGCAGTGGCCGGCGCCTCCAGCTGCTCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: TGKLLDLRVSGSHLS*TASAVAGASSCSPA
Trigger: GGCGGGAGAGCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCGGAGACCCTCAGGTCTAAGAGTTTACCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 90 bp GAGGGACTGGGGGCCAACGGGTTCGGGCCTTGCTTCAACTCCTGGTaGCCCGAAGAATCCACACAGCCAAAGGCCGGGTTGGCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: EGLGANGFGPCFNSW*PEESTQPKAGLASP
Trigger: TGGAGACGCCAACCCGGCCTTTGGCTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTGGCCCCCAGTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 90 bp GCAGAGGGACTGGGGGCCAACGGGTTCGGGCCTTGCTTCAACTCCTaGTGGCCCGAAGAATCCACACAGCCAAAGGCCGGGTTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: AEGLGANGFGPCFNS*WPEESTQPKAGLAS
Trigger: AGACGCCAACCCGGCCTTTGGCTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTGGCCCCCAGTCCCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 90 bp GATTATTTCCTCCCGAGTCCTTCGGACAGGCCGGAGGCTCCAAAGTaGCGGTGGAGTTGCCACCCTGACACAGGCCGTCGTTGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: DYFLPSPSDRPEAPK*RWSCHPDTGRRWGP
Trigger: CGGCCCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGGCCTGTCCGAAGGACTCGGGAGGAAATAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS-3UTR CAA 90 bp TCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCGGGCCCAGTCAGTCTaGCCCACCTGGGACTGGGGC +
Preference number: 5 (lower is better)
Translates to: SGHCRGVPLSHSRCSGEIRAQSV*PTWDWG
Trigger: GCCCCAGTCCCAGGTGGGCAAGACTGACTGGGCCCG...AATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCTCTCCGGGCGGTAGCTaGAGGCAGGCGCCTCGCGCG +
Preference number: 5 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVASPGGS*RQAPRA
Trigger: CGCGCGAGGCGCCTGCCTCAAGCTACCGCCCGGAGA...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACGGCTCGCACCTCTCTaGGACAGCTTCTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: RRGTYCFWEGPRVGLCCARLAPL*DSFCSG
Trigger: GCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCG...TGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACGGGCCCAGTCAGTCTaGCCCACCTGGGACTGGGGC +
Preference number: 5 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQRAQSV*PTWDWG
Trigger: GCCCCAGTCCCAGGTGGGCAAGACTGACTGGGCCCG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCAGCCCCGGGTCCGCACACCACTGCAGATCATaGCTAGTTTTGCAGATTCTC +
Preference number: 5 (lower is better)
Translates to: LQEGGSKAAGLSSSPGSAHHCRS*LVLQIL
Trigger: GAGAATCTGCAAAACTAGCAATGATCTGCAGTGGTG...TGCGGACCCGGGGCTGGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CAA 90 bp CACACGGAGCTGACTTCGCTGTCCCACGGTGGGTGGAGTGATCACTTGGCGACTCCGCAGAGGAACTTATaGCTTCTGGGAAGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: HTELTSLSHGGWSDHLATPQRNL*LLGRAP
Trigger: CGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCGG...AGTCGCCAAGTGATCACTCCACCCACCGTGGGACAGCGAAGTCAGCTCCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp CCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTGTCAGCCAAAGGCCGGGTaGGCGTCTCCACTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: PSKNPAHHIPVARACRWCQPKAG*ASPLVG
Trigger: TCCCACTAGTGGAGACGCCAACCCGGCCTTTGGCTG...ACACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp GAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTAAGAGCGGCTGCGGCTaGGGGCTAGCGTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: ETTSRCTPSKNPAHHIPVKSGCG*GLASQR
Trigger: GCGCTGGGACGCTAGCCCCAAGCCGCAGCCGCTCTT...AACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CAA 90 bp TGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCCTTTTTGGCACTGGATCCCTTTTaGCAGGCCAGTCTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: CFWEGPRVGLCCALDPFLALDPF*QASLFV
Trigger: CACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGC...CAAAAAGGGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGCATGCAGGTGGTCCGCAGAGGAACTTATaGCTTCTGGGAAGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: LPARTLHTTFLLPEHAGGPQRNL*LLGRAP
Trigger: CGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCGG...ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACGGCTCGCACCTCTCTaGGACAGCTTCTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQRLAPL*DSFCSG
Trigger: GCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp CGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTCAGCCAAAGGCCGGGTaGGCGTCTCCACTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: RNDVTLYSQQEPCTPHSCQPKAG*ASPLVG
Trigger: TCCCACTAGTGGAGACGCCAACCCGGCCTTTGGCTG...ACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACAGCCAAAGGCCGGGTaGGCGTCTCCACTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQQPKAG*ASPLVG
Trigger: TCCCACTAGTGGAGACGCCAACCCGGCCTTTGGCTG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCGATCTAGTCCGGGCATaGTCGGGGTGTCCCACTCTC +
Preference number: 5 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVADLVRA*SGCPTL
Trigger: GAGAGTGGGACACCCCGACAATGCCCGGACTAGATC...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp TCTTCCATTTTCAAGCTTCAGGAGGGCGGCTCCAAGGCAGCGGGGCTCTCTTCCGCACTGGATCCCTTTTaGCAGGCCAGTCTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: SSIFKLQEGGSKAAGLSSALDPF*QASLFV
Trigger: CACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGC...GGAAGAGAGCCCCGCTGCCTTGGAGCCGCCCTCCTGAAGCTTGAAAATGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CACACGGAGCTGACTTCGCTGTCCCACGGTGGGTGGAGTGATCACTTGGCGACTGAAAGGCTCTCAGTCTaGTTGAGGTATCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: HTELTSLSHGGWSDHLATERLSV*LRYPAL
Trigger: GAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTC...AGTCGCCAAGTGATCACTCCACCCACCGTGGGACAGCGAAGTCAGCTCCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp TCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTGAACGTCTCCTTCTaGGAGAGAAGCGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SGHCRGVPLSHSRCSGEILNVSF*ERSGER
Trigger: CCTTTCCCCGCTTCTCTCCAAGAAGGAGACGTTCAG...AATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACAGCCAAAGGCCGGGTaGGCGTCTCCACTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNEQPKAG*ASPLVG
Trigger: TCCCACTAGTGGAGACGCCAACCCGGCCTTTGGCTG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp CGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCAGAGGACACCGAGAAGGTTTaGCTGAGGTCCACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: RHVVLPARTLHTTFLLPEDTEKV*LRSTLW
Trigger: CCACAGGGTGGACCTCAGCAAAACCTTCTCGGTGTC...CTCTGGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCAATAAACCCAACGAATTaGAGGCCGGCAGCCAAACCA +
Preference number: 5 (lower is better)
Translates to: RRGTYCFWEGPRVGLCCAINPTN*RPAAKP
Trigger: TGGTTTGGCTGCCGGCCTCAAATTCGTTGGGTTTAT...TGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp AACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGATCCGAAAGGCTCTCAGTCTaGTTGAGGTATCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: NLLLLGRAPGRSVLRTGSERLSV*LRYPAL
Trigger: GAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTC...GGATCCAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTGCTACCACCCGAGGCTaGGGCTTGCCTCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: KDKVHEATTFACQPQHSLATTRG*GLPPAP
Trigger: AGGAGCAGGAGGCAAGCCCAAGCCTCGGGTGGTAGC...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS TCA 90 bp GTCCAGTGCCTTCGTCCATGGCGCTTAGAATTCAGATTTGATAGCTaGTGGCACCCAAGCACTCCGGCACGTTTCATCCACCGGCACGAG +
Preference number: 5 (lower is better)
Translates to: VQCLRPWRLEFRFDS*WHPSTPARFIHRHE
Trigger: CTCGTGCCGGTGGATGAAACGTGCCGGAGTGCTTGGGTGCCATCAGCTATCAAATCTGAATTCTAAGCGCCATGGACGAAGGCACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000532388.5
CDS-3UTR CAA 90 bp AGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCGGACACCGAGAAGGTTTaGCTGAGGTCCACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SLFVEFSLGAESWARSSPDTEKV*LRSTLW
Trigger: CCACAGGGTGGACCTCAGCAAAACCTTCTCGGTGTC...CGGACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGACACCGAGAAGGTTTaGCTGAGGTCCACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQDTEKV*LRSTLW
Trigger: CCACAGGGTGGACCTCAGCAAAACCTTCTCGGTGTC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCGGGTGGAGTGATCACTaGGCGACTTTGGACACAGGT +
Preference number: 5 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVAGWSDH*ATLDTG
Trigger: ACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCC...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp ACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTGCCCACACCACATTCCTGTaGCCAGAGCATGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: TTSRCTPSKNPAHHIPVAHTTFL*PEHAGG
Trigger: ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTG...GGCAACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATCTGAACGTCTCCTTCTaGGAGAGAAGCGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHLNVSF*ERSGER
Trigger: CCTTTCCCCGCTTCTCTCCAAGAAGGAGACGTTCAG...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAAGGGTGGAGTGATCACTaGGCGACTTTGGACACAGGT +
Preference number: 5 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQGWSDH*ATLDTG
Trigger: ACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCC...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACGAAACGACGTCACGTaGTACTCCCAGCAAGAACCC +
Preference number: 5 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQRNDVT*YSQQEP
Trigger: GGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp CCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCCCCCTTCCCATGGTTTaGCTAACCGTGTACCTCAGC +
Preference number: 5 (lower is better)
Translates to: PVSSWNSPWVLKAGQDLVPLPMV*LTVYLS
Trigger: GCTGAGGTACACGGTTAGCAAAACCATGGGAAGGGG...GACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS GCA 90 bp AGTCCCAGAGCGCGGTATCAAACGAAACCGAAAATCCGTCTGCTTTaGCGAGAGCTAGGGAAGCCACAACCAAACAAAGAGATCCCGGCA +
Preference number: 5 (lower is better)
Translates to: SPRARYQTKPKIRLL*RELGKPQPNKEIPA
Trigger: TGCCGGGATCTCTTTGTTTGGTTGTGGCTTCCCTAGCTCTCGGCAAAGCAGACGGATTTTCGGTTTCGTTTGATACCGCGCTCTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532388.5
CDS-3UTR CAA 90 bp CGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTCAACCACAATTAACGTaGCAGCTTCCTGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: RALSGCPTLSLTVLRGNSQPQLT*QLPVRF
Trigger: GAATCTGACAGGAAGCTGCAACGTTAATTGTGGTTG...AGAATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp AGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGCAACCACAATTAACGTaGCAGCTTCCTGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: RGTYCFWEGPRVGLCCALQPQLT*QLPVRF
Trigger: GAATCTGACAGGAAGCTGCAACGTTAATTGTGGTTG...CAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACCACATTCCTGTTCACACCACATTCCTGTaGCCAGAGCATGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: ETTSRCTPSKNPAHHIPVHTTFL*PEHAGG
Trigger: ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTG...AACAGGAATGTGGTGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACACACCACATTCCTGTaGCCAGAGCATGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNEHTTFL*PEHAGG
Trigger: ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp CAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCTGCAGTCCATCCTCCTaGTATTTTATGGAGTACCAG +
Preference number: 5 (lower is better)
Translates to: QDLVRALSGCPTLSLTVLCSPSS*YFMEYQ
Trigger: CTGGTACTCCATAAAATACAAGGAGGATGGACTGCA...GAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CGCAGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGAGTTTTGTTGGTTaGAGGATTGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: RRGTYCFWEGPRVGLCCALSFVG*RIVSVE
Trigger: CTCTACAGACACAATCCTCAAACCAACAAAACTCAG...TGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACCCCTTCCCATGGTTTaGCTAACCGTGTACCTCAGC +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNEPLPMV*LTVYLS
Trigger: GCTGAGGTACACGGTTAGCAAAACCATGGGAAGGGG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATCTTTTCCCAGTGACTTaGTGGGCCCGTAGAGCTAAA +
Preference number: 5 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHLFPVT*WARRAK
Trigger: TTTAGCTCTACGGGCCCACAAAGTCACTGGGAAAAG...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTATGAGGCAACTACCTTaGCCTGCCAGCCGCAGCACT +
Preference number: 5 (lower is better)
Translates to: KDKVHEATTFACQPQHSLMRQLP*PASRST
Trigger: AGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCAT...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGTCTCCGGGCGGTAGCTaGAGGCAGGCGCCTCGCGCG +
Preference number: 5 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLSPGGS*RQAPRA
Trigger: CGCGCGAGGCGCCTGCCTCAAGCTACCGCCCGGAGA...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp AGCATAGCCGTTCTCATTGAGATAAGTCTTGACAATAACCACACGGAGCTGACTCAACGGGTTCGGGCCTaGCTTCAACTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SIAVLIEISLDNNHTELTQRVRA*LQLLVA
Trigger: GGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTG...AGTCAGCTCCGTGTGGTTATTGTCAAGACTTATCTCAATGAGAACGGCTATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp TGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTAGATCATTGCTAGTTTaGCAGATTCTCTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: WARSSPGIVGVSHSLTHGRSLLV*QILWHQ
Trigger: TTGGTGCCAGAGAATCTGCAAAACTAGCAATGATCT...ACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CAA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTCTGATCACTTGGCGACTTaGGACACAGGTGCATTCTGT +
Preference number: 5 (lower is better)
Translates to: VCAAHWIPFCRPVSSWNSDHLAT*DTGAFC
Trigger: ACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATC...AGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTTGCAGTCCATCCTCCTaGTATTTTATGGAGTACCAG +
Preference number: 5 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTCSPSS*YFMEYQ
Trigger: CTGGTACTCCATAAAATACAAGGAGGATGGACTGCA...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCAGATCTAGTCCGGGCATaGTCGGGGTGTCCCACTCTC +
Preference number: 5 (lower is better)
Translates to: QNTQNETTSRCTPSKNPADLVRA*SGCPTL
Trigger: GAGAGTGGGACACCCCGACAATGCCCGGACTAGATC...TGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp AGAGGAACTTATTGCTTCTGGGAAGGGCCCCGGGTAGGTCTGTGCTGCGCACTGGAAAAGAAGGCACAGTaGTTTCTCAAGTCGCCATTT +
Preference number: 5 (lower is better)
Translates to: RGTYCFWEGPRVGLCCALEKKAQ*FLKSPF
Trigger: AAATGGCGACTTGAGAAACAACTGTGCCTTCTTTTC...CAGTGCGCAGCACAGACCTACCCGGGGCCCTTCCCAGAAGCAATAAGTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTCTAGGCTCTCAGTCTTGTaGAGGTATCCAGCCCTCAAT +
Preference number: 5 (lower is better)
Translates to: VCAAHWIPFCRPVSSWNSRLSVL*RYPALN
Trigger: ATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCT...AGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CCAGTCTCTTCGTGGAATTCTCCCTGGGTGCTGAAAGCTGGGCAAGATCTAGTCAGGCTCTCAGTCTTGTaGAGGTATCCAGCCCTCAAT +
Preference number: 5 (lower is better)
Translates to: PVSSWNSPWVLKAGQDLVRLSVL*RYPALN
Trigger: ATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCT...GACTAGATCTTGCCCAGCTTTCAGCACCCAGGGAGAATTCCACGAAGAGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGCAGTCAAGCAAGGTaGGAGAGCAGAAGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQCSQAR*ESRSLN
Trigger: ATTCAGGCTTCTGCTCTCCAACCTTGCTTGACTGCA...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS CCA 90 bp ATGGTGGTAATTACGCTGCTCAGGTACCCAGAGACCATTAACGCCTaGATGAAGGTCAGAAAGCACATGCACACCAGGAAGCAACGGGAA +
Preference number: 5 (lower is better)
Translates to: MVVITLLRYPETINA*MKVRKHMHTRKQRE
Trigger: TTCCCGTTGCTTCCTGGTGTGCATGTGCTTTCTGACCTTCATCCAGGCGTTAATGGTCTCTGGGTACCTGAGCAGCGTAATTACCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTCAACGGGTTCGGGCCTaGCTTCAACTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGQRVRA*LQLLVA
Trigger: GGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTG...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp CTCTCCTCATCTTCTACGGACCTGAGTGTTACTATGATAGCTGATGGTTGGGCAGGGTGGAGTGATCACTaGGCGACTTTGGACACAGGT +
Preference number: 5 (lower is better)
Translates to: LSSSSTDLSVTMIADGWAGWSDH*ATLDTG
Trigger: ACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCC...TGCCCAACCATCAGCTATCATAGTAACACTCAGGTCCGTAGAAGATGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp TTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCCGAAACGACGTCACGTaGTACTCCCAGCAAGAACCC +
Preference number: 5 (lower is better)
Translates to: LMICTAIPLPMVLLTVYLRNDVT*YSQQEP
Trigger: GGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG...GAGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAATAAACCCAACGAATTaGAGGCCGGCAGCCAAACCA +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNEINPTN*RPAAKP
Trigger: TGGTTTGGCTGCCGGCCTCAAATTCGTTGGGTTTAT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAACGGCTCGCACCTCTCTaGGACAGCTTCTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKRLAPL*DSFCSG
Trigger: GCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCG...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAACAACGGGTTCGGGCCTaGCTTCAACTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKQRVRA*LQLLVA
Trigger: GGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTG...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp TCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTCACGGTGCTCAGGGGAAATTCTTGTTCACTGTTGTTaGATTTCTCCTTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: SGHCRGVPLSHSRCSGEILVHCC*ISPSEH
Trigger: ATGTTCTGAAGGAGAAATCAAACAACAGTGAACAAG...AATTTCCCCTGAGCACCGTGAGTGAGAGAGTGGGACACCCCGACAATGCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CAA 90 bp GAAAGCTGGGCAAGATCTAGTCCGGGCATTGTCGGGGTGTCCCACTCTCTCACTATCGAAGAAACTTTTTaGTCCGCTTGTTCACTGTTG +
Preference number: 5 (lower is better)
Translates to: ESWARSSPGIVGVSHSLTIEETF*SACSLL
Trigger: CAACAGTGAACAAGCGGACAAAAAAGTTTCTTCGAT...AGTGAGAGAGTGGGACACCCCGACAATGCCCGGACTAGATCTTGCCCAGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CAA 90 bp CTTGGAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAACAACCACAATTAACGTaGCAGCTTCCTGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: LGEKRGKALSLVEVSSPQQPQLT*QLPVRF
Trigger: GAATCTGACAGGAAGCTGCAACGTTAATTGTGGTTG...TTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGATCTAGTCCGGGCATaGTCGGGGTGTCCCACTCTC +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGDLVRA*SGCPTL
Trigger: GAGAGTGGGACACCCCGACAATGCCCGGACTAGATC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATCTGAGTTTTGTTGGTTaGAGGATTGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHLSFVG*RIVSVE
Trigger: CTCTACAGACACAATCCTCAAACCAACAAAACTCAG...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp GCCAGAACCCCTGAGCTAACTTGCTGTCAATCCGTTAGCGCCGTCAGGAAGCATATGACCATAGGCTCCTaGGCAGAAAAAGTTCACAAT +
Preference number: 5 (lower is better)
Translates to: ARTPELTCCQSVSAVRKHMTIGS*AEKVHN
Trigger: ATTGTGAACTTTTTCTGCCAAGGAGCCTATGGTCAT...ATGCTTCCTGACGGCGCTAACGGATTGACAGCAAGTTAGCTCAGGGGTTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS TCA 90 bp GCCGACCTGGCAGCTCTGACTCAGAGGCAGTGTCTTTTAATCGAGTaGACTAACTGCAGCCTTTCCGTACTCCTACTCCATTACTCAAAA +
Preference number: 5 (lower is better)
Translates to: ADLAALTQRQCLLIE*TNCSLSVLLLHYSK
Trigger: TTTTGAGTAATGGAGTAGGAGTACGGAAAGGCTGCAGTTAGTTCACTCGATTAAAAGACACTGCCTCTGAGTCAGAGCTGCCAGGTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531422.1
CDS GCA 90 bp CACTCCAACCTGTGCTTTAATCATCGAATCTCCTTCTTTGATTCTTaGCCTCCTGCTTCCGTCTTTCCTTTGATTACACTGGGCCCACCC +
Preference number: 5 (lower is better)
Translates to: HSNLCFNHRISFFDS*PPASVFPLITLGPP
Trigger: GGGTGGGCCCAGTGTAATCAAAGGAAAGACGGAAGCAGGAGGGCAAGAATCAAAGAAGGAGATTCGATGATTAAAGCACAGGTTGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528658.1
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGACACCGAGAAGGTTTaGCTGAGGTCCACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGDTEKV*LRSTLW
Trigger: CCACAGGGTGGACCTCAGCAAAACCTTCTCGGTGTC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACACCACTGCAGATCATaGCTAGTTTTGCAGATTCTC +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNEHHCRS*LVLQIL
Trigger: GAGAATCTGCAAAACTAGCAATGATCTGCAGTGGTG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR CAA 90 bp AGCATAGCCGTTCTCATTGAGATAAGTCTTGACAATAACCACACGGAGCTGACTCGAAACGACGTCACGTaGTACTCCCAGCAAGAACCC +
Preference number: 5 (lower is better)
Translates to: SIAVLIEISLDNNHTELTRNDVT*YSQQEP
Trigger: GGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG...AGTCAGCTCCGTGTGGTTATTGTCAAGACTTATCTCAATGAGAACGGCTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAATGCAGTCCATCCTCCTaGTATTTTATGGAGTACCAG +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNECSPSS*YFMEYQ
Trigger: CTGGTACTCCATAAAATACAAGGAGGATGGACTGCA...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAACCGCAGAGGAACTTATaGCTTCTGGGAAGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: SESLPETYSKGESKGSVKPQRNL*LLGRAP
Trigger: CGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCGG...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAACCGCAGAGGAACTTATaGCTTCTGGGAAGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKPQRNL*LLGRAP
Trigger: CGGGGCCCTTCCCAGAAGCAATAAGTTCCTCTGCGG...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp TATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCTCTCCCTGAACGTCTCCTTCTaGGAGAGAAGCGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: YASVRNKTNCIPSAKGLSLNVSF*ERSGER
Trigger: CCTTTCCCCGCTTCTCTCCAAGAAGGAGACGTTCAG...GGAGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTAAACAGGAGAATCACTaGAACCCAGGAAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPKQENH*NPGSGG
Trigger: ACCTCCGCTTCCTGGGTTCAAGTGATTCTCCTGTTT...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAGAGCGCAAGCTGGAATaGTGGACTGAAGAAGAATTT +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNEERKLE*WTEEEF
Trigger: AAATTCTTCTTCAGTCCACAATTCCAGCTTGCGCTC...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAAATGCAACAAGAAGTTaGGGACAGATACAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNENATRS*GQIQPA
Trigger: TGCTGGCTGTATCTGTCCCAAACTTCTTGTTGCATT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS TCA 90 bp GAATCTCCTTCTTTGATTCTTGCCCTCCTGCTTCCGTCTTTCCTTTaGTTACACTGGGCCCACCCAGGTCATCAGTTTCCAATGAAACGA +
Preference number: 5 (lower is better)
Translates to: ESPSLILALLLPSFL*LHWAHPGHQFPMKR
Trigger: TCGTTTCATTGGAAACTGATGACCTGGGTGGGCCCAGTGTAATCAAAGGAAAGACGGAAGCAGGAGGGCAAGAATCAAAGAAGGAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528658.1
CDS-3UTR CAA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGCGGCTCGCACCTCTCTaGGACAGCTTCTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLRLAPL*DSFCSG
Trigger: GCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCG...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGCAACGGGTTCGGGCCTaGCTTCAACTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLQRVRA*LQLLVA
Trigger: GGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTG...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp GTCTGTGCTGCGCACTGGATCCCTTTTTGCAGGCCAGTCTCTTCGTGGAATTCTTGTGACTCGATGAACTaGGGAATGAAGGTAATGAAA +
Preference number: 5 (lower is better)
Translates to: VCAAHWIPFCRPVSSWNSCDSMN*GMKVMK
Trigger: TTTCATTACCTTCATTCCCAAGTTCATCGAGTCACA...AGAATTCCACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGCGCAGCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGGGTGGAGTGATCACTaGGCGACTTTGGACACAGGT +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGGWSDH*ATLDTG
Trigger: ACCTGTGTCCAAAGTCGCCAAGTGATCACTCCACCC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTTGCAGTCCATCCTCCTaGTATTTTATGGAGTACCAG +
Preference number: 5 (lower is better)
Translates to: KDKVHEATTFACQPQHSLCSPSS*YFMEYQ
Trigger: CTGGTACTCCATAAAATACAAGGAGGATGGACTGCA...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGCCCCTTCCCATGGTTTaGCTAACCGTGTACCTCAGC +
Preference number: 5 (lower is better)
Translates to: INTTEMGTNLAERLLLGEPLPMV*LTVYLS
Trigger: GCTGAGGTACACGGTTAGCAAAACCATGGGAAGGGG...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCAATTATATCAGCATTaGGCCCTTACACTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPQLYQH*ALTLPG
Trigger: GCCAGGGAGTGTAAGGGCCAAATGCTGATATAATTG...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp GCCAGACAAGGGTTAAAGTATGTAATTCCATCTGATCCACAGACTGGCTCATACGATCACTTGGCGACTTaGGACACAGGTGCATTCTGT +
Preference number: 5 (lower is better)
Translates to: ARQGLKYVIPSDPQTGSYDHLAT*DTGAFC
Trigger: ACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATC...GTATGAGCCAGTCTGTGGATCAGATGGAATTACATACTTTAACCCTTGTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp TATGCAAGTGTTCGCAACAAAACAAACTGCATTCCCAGTGCAAAAGGTCTCTCCATAAACCCAACGAATTaGAGGCCGGCAGCCAAACCA +
Preference number: 5 (lower is better)
Translates to: YASVRNKTNCIPSAKGLSINPTN*RPAAKP
Trigger: TGGTTTGGCTGCCGGCCTCAAATTCGTTGGGTTTAT...GGAGAGACCTTTTGCACTGGGAATGCAGTTTGTTTTGTTGCGAACACTTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGGATCTAGTCCGGGCATaGTCGGGGTGTCCCACTCTC +
Preference number: 5 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLDLVRA*SGCPTL
Trigger: GAGAGTGGGACACCCCGACAATGCCCGGACTAGATC...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGCACTGGATCCCTTTTaGCAGGCCAGTCTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKALDPF*QASLFV
Trigger: CACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATGAAAGGCTCTCAGTCTaGTTGAGGTATCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: FQVHATKGNNVTATKGNNERLSV*LRYPAL
Trigger: GAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTC...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTGAAAGGCTCTCAGTCTaGTTGAGGTATCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGERLSV*LRYPAL
Trigger: GAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTC...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp GCCTTATACCCAGGAGTATTTGCACAATTCCACCTGTGCAGTCAAGCAAGGTTGTATACCCAGGAGTATTaGCACAATTCCACCTGTGCA +
Preference number: 5 (lower is better)
Translates to: ALYPGVFAQFHLCSQARLYTQEY*HNSTCA
Trigger: TGCACAGGTGGAATTGTGCAAATACTCCTGGGTATA...CAACCTTGCTTGACTGCACAGGTGGAATTGTGCAAATACTCCTGGGTATAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp AAAGATAAAGTGCATGAGGCAACTACCTTTGCCTGCCAGCCGCAGCACTCTCTTAACCAAGAGAACTGTTaGACCAATGTCATTCCTAGG +
Preference number: 5 (lower is better)
Translates to: KDKVHEATTFACQPQHSLNQENC*TNVIPR
Trigger: CCTAGGAATGACATTGGTCAAACAGTTCTCTTGGTT...AAGAGAGTGCTGCGGCTGGCAGGCAAAGGTAGTTGCCTCATGCACTTTATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAACTTGTTCACTGTTGTTaGATTTCTCCTTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNELVHCC*ISPSEH
Trigger: ATGTTCTGAAGGAGAAATCAAACAACAGTGAACAAG...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR CAA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGGATCACTTGGCGACTTaGGACACAGGTGCATTCTGT +
Preference number: 5 (lower is better)
Translates to: INTTEMGTNLAERLLLGEDHLAT*DTGAFC
Trigger: ACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATC...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTAGGCTCTCAGTCTTGTaGAGGTATCCAGCCCTCAAT +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGRLSVL*RYPALN
Trigger: ATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp GAGAGAAGCGGGGAAAGGCTCTCAGTCTTGTTGAGGTATCCAGCCCTCAATGAAATAGTCACCTTGCCTTaGTTAACCAAAAGCTATTGT +
Preference number: 5 (lower is better)
Translates to: ERSGERLSVLLRYPALNEIVTLP*LTKSYC
Trigger: ACAATAGCTTTTGGTTAACAAAGGCAAGGTGACTAT...TTCATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCTTTCCCCGCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAGATCACTTGGCGACTTaGGACACAGGTGCATTCTGT +
Preference number: 5 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKDHLAT*DTGAFC
Trigger: ACAGAATGCACCTGTGTCCAAAGTCGCCAAGTGATC...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGCACACCACATTCCTGTaGCCAGAGCATGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: RKSANPTKILSMQYLNDQHTTFL*PEHAGG
Trigger: ACCACCTGCATGCTCTGGCAACAGGAATGTGGTGTG...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAAATAAACCCAACGAATTaGAGGCCGGCAGCCAAACCA +
Preference number: 5 (lower is better)
Translates to: SESLPETYSKGESKGSVKINPTN*RPAAKP
Trigger: TGGTTTGGCTGCCGGCCTCAAATTCGTTGGGTTTAT...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGGCACTGGATCCCTTTTaGCAGGCCAGTCTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLALDPF*QASLFV
Trigger: CACGAAGAGACTGGCCTGCAAAAAGGGATCCAGTGC...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp AAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACGAAAAGAAGGCACAGTaGTTTCTCAAGTCGCCATTT +
Preference number: 5 (lower is better)
Translates to: KIHKTKRRHVVLPARTLHEKKAQ*FLKSPF
Trigger: AAATGGCGACTTGAGAAACAACTGTGCCTTCTTTTC...GTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp AAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAAGAACCCTGCACACTGAGTTTTGTTGGTTaGAGGATTGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: KYTKRNDVTLYSQQEPCTLSFVG*RIVSVE
Trigger: CTCTACAGACACAATCCTCAAACCAACAAAACTCAG...TGTGCAGGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATGAATTTTCTTGGTGGTaGGTGAACATGGAGGACCAC +
Preference number: 5 (lower is better)
Translates to: FQVHATKGNNVTATKGNNEFSWW*VNMEDH
Trigger: GTGGTCCTCCATGTTCACCAACCACCAAGAAAATTC...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS CCA 90 bp ATTTTACAACCACAATTAACGTTGCAGCTTCCTGTCAGATTCCTATaGGGCATGGTGAGAGAAGGTCTAGGTACAAGGAGGAGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: ILQPQLTLQLPVRFL*GMVREGLGTRRSFL
Trigger: AAGAAAACTCCTCCTTGTACCTAGACCTTCTCTCACCATGCCCCATAGGAATCTGACAGGAAGCTGCAACGTTAATTGTGGTTGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTCTTGTTCACTGTTGTTaGATTTCTCCTTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPLVHCC*ISPSEH
Trigger: ATGTTCTGAAGGAGAAATCAAACAACAGTGAACAAG...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp TTCCAAGTGCATGCCACTAAAGGTAACAATGTCACAGCGACTAAAGGGAACAATCAACCACAATTAACGTaGCAGCTTCCTGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: FQVHATKGNNVTATKGNNQPQLT*QLPVRF
Trigger: GAATCTGACAGGAAGCTGCAACGTTAATTGTGGTTG...ATTGTTCCCTTTAGTCGCTGTGACATTGTTACCTTTAGTGGCATGCACTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp TCTTTATGCAACAGTGCAAAACCTTTCATCACAAACATACCTCTACACAAAACACGAAACGACGTCACGTaGTACTCCCAGCAAGAACCC +
Preference number: 5 (lower is better)
Translates to: SLCNSAKPFITNIPLHKTRNDVT*YSQQEP
Trigger: GGGTTCTTGCTGGGAGTACAACGTGACGTCGTTTCG...TGTTTTGTGTAGAGGTATGTTTGTGATGAAAGGTTTTGCACTGTTGCATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTTTGAGACAAATTCATTaGTGCTTTGTAGCAGAACTC +
Preference number: 5 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPLRQIH*CFVAEL
Trigger: GAGTTCTGCTACAAAGCACAAATGAATTTGTCTCAA...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp GTTAATGATATGCACCGCCATTCCCCTTCCCATGGTTTTGCTAACCGTGTACCTTCTGCAACAATTTTCTaGGATGAGAAAGCTGTCATT +
Preference number: 5 (lower is better)
Translates to: VNDMHRHSPSHGFANRVPSATIF*DEKAVI
Trigger: AATGACAGCTTTCTCATCCAAGAAAATTGTTGCAGA...AGGTACACGGTTAGCAAAACCATGGGAAGGGGAATGGCGGTGCATATCATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGATCGAAGAAACTTTTTaGTCCGCTTGTTCACTGTTG +
Preference number: 5 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKIEETF*SACSLL
Trigger: CAACAGTGAACAAGCGGACAAAAAAGTTTCTTCGAT...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp ATTAACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGGAAAAGAAGGCACAGTaGTTTCTCAAGTCGCCATTT +
Preference number: 5 (lower is better)
Translates to: INTTEMGTNLAERLLLGEEKKAQ*FLKSPF
Trigger: AAATGGCGACTTGAGAAACAACTGTGCCTTCTTTTC...CTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTCTGAGTTTTGTTGGTTaGAGGATTGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGLSFVG*RIVSVE
Trigger: CTCTACAGACACAATCCTCAAACCAACAAAACTCAG...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGAGGCTCTCAGTCTTGTaGAGGTATCCAGCCCTCAAT +
Preference number: 5 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLRLSVL*RYPALN
Trigger: ATTGAGGGCTGGATACCTCAACAAGACTGAGAGCCT...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS-3UTR CAA 90 bp GCAGCCAAACCAAAATACACAAAACGAAACGACGTCACGTTGTACTCCCAGCAATTGAGACAAATTCATTaGTGCTTTGTAGCAGAACTC +
Preference number: 5 (lower is better)
Translates to: AAKPKYTKRNDVTLYSQQLRQIH*CFVAEL
Trigger: GAGTTCTGCTACAAAGCACAAATGAATTTGTCTCAA...TTGCTGGGAGTACAACGTGACGTCGTTTCGTTTTGTGTATTTTGGTTTGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS-3UTR CAA 90 bp TCAGAATCACTGCCAGAAACTTACAGTAAGGGGGAATCAAAGGGTAGTGTAAAAAGATCATTGCTAGTTTaGCAGATTCTCTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: SESLPETYSKGESKGSVKRSLLV*QILWHQ
Trigger: TTGGTGCCAGAGAATCTGCAAAACTAGCAATGATCT...TTTTACACTACCCTTTGATTCCCCCTTACTGTAAGTTTCTGGCAGTGATTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAAGATCATTGCTAGTTTaGCAGATTCTCTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKRSLLV*QILWHQ
Trigger: TTGGTGCCAGAGAATCTGCAAAACTAGCAATGATCT...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR CAA 90 bp CCATCTGATCCACAGACTGGCTCATACTCGTGTATTTTACAACCACAATTAACGAATGGGATAAGAGTATaGCAGGTCCGTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: PSDPQTGSYSCILQPQLTNGIRV*QVRLHF
Trigger: GAAATGTAAACGGACCTGCAATACTCTTATCCCATT...CGTTAATTGTGGTTGTAAAATACACGAGTATGAGCCAGTCTGTGGATCAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTAATGGGATAAGAGTATaGCAGGTCCGTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGNGIRV*QVRLHF
Trigger: GAAATGTAAACGGACCTGCAATACTCTTATCCCATT...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS-3UTR CAA 90 bp AACACAACGGAAATGGGAACAAATCTAGCTGAACGTCTCCTTCTTGGAGAGAAGATCGGGATCAGTGGTTaGATATGTATTTTATGTGTG +
Preference number: 5 (lower is better)
Translates to: NTTEMGTNLAERLLLGEKIGISG*ICILCV
Trigger: CACACATAAAATACATATCAAACCACTGATCCCGAT...CTTCTCTCCAAGAAGGAGACGTTCAGCTAGATTTGTTCCCATTTCCGTTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp ATAGCGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTTTCACGCTTCATTTTaGCAGCATAGATGGAGTAAC +
Preference number: 5 (lower is better)
Translates to: IAAVYTEFCWFEDCVCRGFHASF*QHRWSN
Trigger: GTTACTCCATCTATGCTGCAAAAATGAAGCGTGAAA...ACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp CGGCTGTGTATACTGAGTTTTGTTGGTTTGAGGATTGTGTCTGTAGAGGTTAAAATCGAAGAAACTTTTTaGTCCGCTTGTTCACTGTTG +
Preference number: 5 (lower is better)
Translates to: RLCILSFVGLRIVSVEVKIEETF*SACSLL
Trigger: CAACAGTGAACAAGCGGACAAAAAAGTTTCTTCGAT...TTTAACCTCTACAGACACAATCCTCAAACCAACAAAACTCAGTATACACAGCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
CDS-3UTR CAA 90 bp GTCAATCACATCTCTTCTGGGGATAAGGGTAAACCAGAAGAGAAAAACATTTCCTGTGACTCGATGAACTaGGGAATGAAGGTAATGAAA +
Preference number: 5 (lower is better)
Translates to: VNHISSGDKGKPEEKNISCDSMN*GMKVMK
Trigger: TTTCATTACCTTCATTCCCAAGTTCATCGAGTCACA...GGAAATGTTTTTCTCTTCTGGTTTACCCTTATCCCCAGAAGAGATGTGATTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp AGAAAAAGTGCCAATCCCACCAAAATTCTCTCAATGCAGTATCTTAATGATCAGCACCACTGCAGATCATaGCTAGTTTTGCAGATTCTC +
Preference number: 5 (lower is better)
Translates to: RKSANPTKILSMQYLNDQHHCRS*LVLQIL
Trigger: GAGAATCTGCAAAACTAGCAATGATCTGCAGTGGTG...CTGATCATTAAGATACTGCATTGAGAGAATTTTGGTGGGATTGGCACTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260126.9
CDS-3UTR CAA 90 bp ACTCACAGTAGGTGTTCATATCTAAAAACTTTGATTTGGAAATGCCAAGTCCTGAATGGGATAAGAGTATaGCAGGTCCGTTTACATTTC +
Preference number: 5 (lower is better)
Translates to: THSRCSYLKTLIWKCQVLNGIRV*QVRLHF
Trigger: GAAATGTAAACGGACCTGCAATACTCTTATCCCATT...CAGGACTTGGCATTTCCAAATCAAAGTTTTTAGATATGAACACCTACTGTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS GCA 72 bp GCCGCGTGCCACAGGGGGCAGGGGTCCGCGCGGTACTaGGATGAGCCCTACTCGGCGTCCCTCTCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: AACHRGQGSARY*DEPYSASLSGR
Trigger: CCGCCCGGAGAGGGACGCCGAGTAGGGCTCATCGCAGTACCGCGCGGACCCCTGCCCCCTGTGGCACGCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS CCA 72 bp ACCTCGCTGCGCCAGGGGTACCGGGTGTTCGCCGCCTaGGCTCGCGGCACCCTCGGGAGTGAAGCTGCCGAC +
Preference number: 6 (lower is better)
Translates to: TSLRQGYRVFAA*ARGTLGSEAAD
Trigger: GTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGAACACCCGGTACCCCTGGCGCAGCGAGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS CAA 90 bp GGTACTGCGATGAGCCCTACTCGGCGTCCCTCTCCGGGCGGTAGCTaGAGGCAGGCGCCTCGCGCGTCCCGGGCTCATCCCCTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: GTAMSPTRRPSPGGS*RQAPRASRAHPLRR
Trigger: GCGGCGGAGGGGATGAGCCCGGGACGCGCGAGGCGCCTGCCTCAAGCTACCGCCCGGAGAGGGACGCCGAGTAGGGCTCATCGCAGTACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS TCA 72 bp GTGCCACAGGGGGCAGGGGTCCGCGCGGTACTGCGATaGGCCCTACTCGGCGTCCCTCTCCGGGCGGTAGCT +
Preference number: 6 (lower is better)
Translates to: VPQGAGVRAVLR*ALLGVPLRAVA
Trigger: AGCTACCGCCCGGAGAGGGACGCCGAGTAGGGCTCATCGCAGTACCGCGCGGACCCCTGCCCCCTGTGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS CAA 72 bp ATGAGCCCTACTCGGCGTCCCTCTCCGGGCGGTAGCTaGAGGCAGGCGCCTCGCGCGTCCCGGGCTCATCCC +
Preference number: 6 (lower is better)
Translates to: MSPTRRPSPGGS*RQAPRASRAHP
Trigger: GGGATGAGCCCGGGACGCGCGAGGCGCCTGCCTCAAGCTACCGCCCGGAGAGGGACGCCGAGTAGGGCTCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS TCA 72 bp GGTGTTCGCCGCCTGGGCTCGCGGCACCCTCGGGAGTaGAGCTGCCGACCGGCGTACTGGAACCTCTCTCGC +
Preference number: 6 (lower is better)
Translates to: GVRRLGSRHPRE*SCRPAYWNLSR
Trigger: GCGAGAGAGGTTCCAGTACGCCGGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGAACACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524703.1
CDS GCA 72 bp GAGGGTCTCCGGCTCGCACCTCTCTTGGACAGCTTCTaGAGTGGCCGGCGCCTCCAGCTGCTCTCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: EGLRLAPLLDSF*SGRRLQLLSRP
Trigger: GGGGCGGGAGAGCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCGGAGACCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS GCA 72 bp TCGGACAGGCCGGAGGCTCCAAAGTGGCGGTGGAGTTaGCACCCTGACACAGGCCGTCGTTGGGGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: SDRPEAPKWRWS*HPDTGRRWGPR
Trigger: CCTCGGCCCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGGCCTGTCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS TCA 72 bp GCCACAGGGGCCGCCGACCCCGGCCGCCGAAGTAGCTaGCGAACACCACCACCACCAGGTTCCCGATGTCAA +
Preference number: 6 (lower is better)
Translates to: ATGAADPGRRSS*RTPPPPGSRCQ
Trigger: TTGACATCGGGAACCTGGTGGTGGTGGTGTTCGTCAGCTACTTCGGCGGCCGGGGTCGGCGGCCCCTGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS TCA 72 bp GCCGGAGGCTCCAAAGTGGCGGTGGAGTTGCCACCCTaGCACAGGCCGTCGTTGGGGGCCGAGGCGTTCAAC +
Preference number: 6 (lower is better)
Translates to: AGGSKVAVELPP*HRPSLGAEAFN
Trigger: GTTGAACGCCTCGGCCCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS TCA 72 bp GGTGTTCGCCGCCTGGGCTCGCGGCACCCTCGGGAGTaGAGCTGCCGACCTGCAAAGCAGAAAGAGGGCGGT +
Preference number: 6 (lower is better)
Translates to: GVRRLGSRHPRE*SCRPAKQKEGG
Trigger: ACCGCCCTCTTTCTGCTTTGCAGGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGAACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS GCA 72 bp GGGCTCGCGGCACCCTCGGGAGTGAAGCTGCCGACCTaGAAAGCAGAAAGAGGGCGGTCAGCGAAGAGCGGC +
Preference number: 6 (lower is better)
Translates to: GLAAPSGVKLPT*KAERGRSAKSG
Trigger: GCCGCTCTTCGCTGACCGCCCTCTTTCTGCTTTGCAGGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS TCA 72 bp GGTGTTCGCCGCCTGGGCTCGCGGCACCCTCGGGAGTaGAGCTGCCGACTAGCGAGTCTGTCAGTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: GVRRLGSRHPRE*SCRLASLSVCL
Trigger: CAGACAGACTGACAGACTCGCTAGTCGGCAGCTTCACTCCCGAGGGTGCCGCGAGCCCAGGCGGCGAACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000528658.1
CDS TCA 72 bp GGCATCCTCACCAGCTGCGAGGCGCCCAGTGCATCCTaGTCACAGACACGGCTTCAAGGCTCCGCAGCCGCG +
Preference number: 6 (lower is better)
Translates to: GILTSCEAPSAS*SQTRLQGSAAA
Trigger: CGCGGCTGCGGAGCCTTGAAGCCGTGTCTGTGATCAGGATGCACTGGGCGCCTCGCAGCTGGTGAGGATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS CCA 72 bp AGTCCTTCGGACAGGCCGGAGGCTCCAAAGTGGCGGTaGAGTTGCCACCCTGACACAGGCCGTCGTTGGGGG +
Preference number: 6 (lower is better)
Translates to: SPSDRPEAPKWR*SCHPDTGRRWG
Trigger: CCCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGGCCTGTCCGAAGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 72 bp CTCCCGAGTCCTTCGGACAGGCCGGAGGCTCCAAAGTaGCGGTGGAGTTGCCACCCTGACACAGGCCGTCGT +
Preference number: 6 (lower is better)
Translates to: LPSPSDRPEAPK*RWSCHPDTGRR
Trigger: ACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCACTTTGGAGCCTCCGGCCTGTCCGAAGGACTCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS GCA 72 bp GCAGCAGGGCATCCTCACCAGCTGCGAGGCGCCCAGTaGATCCTGATCACAGACACGGCTTCAAGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: AAGHPHQLRGAQ*ILITDTASRLR
Trigger: GCGGAGCCTTGAAGCCGTGTCTGTGATCAGGATGCACTGGGCGCCTCGCAGCTGGTGAGGATGCCCTGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260126.9
ENST00000524703.1
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000531422.1
ENST00000532388.5
CDS GCA 72 bp GGGGCAGAGGGACTGGGGGCCAACGGGTTCGGGCCTTaGTTCAACTCCTGGTGGCCCGAAGAATCCACACAG +
Preference number: 6 (lower is better)
Translates to: GAEGLGANGFGP*FNSWWPEESTQ
Trigger: CTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTGGCCCCCAGTCCCTCTGCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 72 bp CTCTTAGACCTGAGGGTCTCCGGCTCGCACCTCTCTTaGACAGCTTCTGCAGTGGCCGGCGCCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LLDLRVSGSHLS*TASAVAGASSC
Trigger: GCAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCGGAGACCCTCAGGTCTAAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 72 bp CTGGGGGCCAACGGGTTCGGGCCTTGCTTCAACTCCTaGTGGCCCGAAGAATCCACACAGCCAAAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: LGANGFGPCFNS*WPEESTQPKAG
Trigger: CCCGGCCTTTGGCTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTGGCCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CAA 72 bp CGGGGCAGAGGGACTGGGGGCCAACGGGTTCGGGCCTaGCTTCAACTCCTGGTGGCCCGAAGAATCCACACA +
Preference number: 6 (lower is better)
Translates to: RGRGTGGQRVRA*LQLLVARRIHT
Trigger: TGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTGGCCCCCAGTCCCTCTGCCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CAA 90 bp CGAAGTGGACGGGGCAGAGGGACTGGGGGCCAACGGGTTCGGGCCTaGCTTCAACTCCTGGTGGCCCGAAGAATCCACACAGCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: RSGRGRGTGGQRVRA*LQLLVARRIHTAKG
Trigger: GCCTTTGGCTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTGGCCCCCAGTCCCTCTGCCCCGTCCACTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 72 bp GGGGCCAACGGGTTCGGGCCTTGCTTCAACTCCTGGTaGCCCGAAGAATCCACACAGCCAAAGGCCGGGTTG +
Preference number: 6 (lower is better)
Translates to: GANGFGPCFNSW*PEESTQPKAGL
Trigger: CAACCCGGCCTTTGGCTGTGTGGATTCTTCGGGCCACCAGGAGTTGAAGCAAGGCCCGAACCCGTTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 72 bp TGGCGGTGGAGTTGCCACCCTGACACAGGCCGTCGTTaGGGGCCGAGGCGTTCAACTCTTGGATCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: WRWSCHPDTGRR*GPRRSTLGSGR
Trigger: CCTACCAGATCCAAGAGTTGAACGCCTCGGCCCCCAACGACGGCCTGTGTCAGGGTGGCAACTCCACCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CCA 72 bp GGGAGTGAAGCTGCCGACCAGGGGCATTCGAGGCTGTaGCCCGCACTAAGTCCCAGAGCGCGGTATCAAACG +
Preference number: 6 (lower is better)
Translates to: GSEAADQGHSRL*PALSPRARYQT
Trigger: CGTTTGATACCGCGCTCTGGGACTTAGTGCGGGCCACAGCCTCGAATGCCCCTGGTCGGCAGCTTCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532388.5
CDS CAA 72 bp ACTCTTAGACCTGAGGGTCTCCGGCTCGCACCTCTCTaGGACAGCTTCTGCAGTGGCCGGCGCCTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: TLRPEGLRLAPL*DSFCSGRRLQL
Trigger: CAGCTGGAGGCGCCGGCCACTGCAGAAGCTGTCCAAGAGAGGTGCGAGCCGGAGACCCTCAGGTCTAAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CAA 72 bp TGGTGGCCCGAAGAATCCACACAGCCAAAGGCCGGGTaGGCGTCTCCACTAGTGGGACTGAGGCTTGGCCGG +
Preference number: 6 (lower is better)
Translates to: WWPEESTQPKAG*ASPLVGLRLGR
Trigger: CCGGCCAAGCCTCAGTCCCACTAGTGGAGACGCCAACCCGGCCTTTGGCTGTGTGGATTCTTCGGGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CAA 90 bp TTCAACTCCTGGTGGCCCGAAGAATCCACACAGCCAAAGGCCGGGTaGGCGTCTCCACTAGTGGGACTGAGGCTTGGCCGGCAGGAGGCG +
Preference number: 6 (lower is better)
Translates to: FNSWWPEESTQPKAG*ASPLVGLRLGRQEA
Trigger: CGCCTCCTGCCGGCCAAGCCTCAGTCCCACTAGTGGAGACGCCAACCCGGCCTTTGGCTGTGTGGATTCTTCGGGCCACCAGGAGTTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS GCA 72 bp CCTCCAGCTGCTCTCCCGCCCCGGGCTGCAGTCCAGTaGCTTCGTCCATGGCGCTTAGAATTCAGATTTGAT +
Preference number: 6 (lower is better)
Translates to: PPAALPPRAAVQ*LRPWRLEFRFD
Trigger: ATCAAATCTGAATTCTAAGCGCCATGGACGAAGGCACTGGACTGCAGCCCGGGGCGGGAGAGCAGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CAA 90 bp TGCCGACCGGCGTACTGGAACCTCTCTCGCGATCCCGCACCCAGCTaGAATTCAGCAAGAATCGAAAACAGGTGTGCCCCCGTGGTAAGA +
Preference number: 6 (lower is better)
Translates to: CRPAYWNLSRDPAPS*NSARIENRCAPVVR
Trigger: TCTTACCACGGGGGCACACCTGTTTTCGATTCTTGCTGAATTCAAGCTGGGTGCGGGATCGCGAGAGAGGTTCCAGTACGCCGGTCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524703.1
CDS CCA 72 bp GGCAGAGCACACAGAGCACACACAGGGAGAACAGCTTaGAGGGAGGGGTATGAGGCTGACTGCAGATGCACA +
Preference number: 6 (lower is better)
Translates to: GRAHRAHTGRTA*REGYEADCRCT
Trigger: TGTGCATCTGCAGTCAGCCTCATACCCCTCCCTCCAAGCTGTTCTCCCTGTGTGTGCTCTGTGTGCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532388.5
CDS TCA 72 bp GAAAGCACATGCACACCAGGAAGCAACGGGAATCCGTaGGGACCACGTAGAGGCACCTTCTCTCCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: ESTCTPGSNGNP*GPRRGTFSPGA
Trigger: TGCTCCAGGAGAGAAGGTGCCTCTACGTGGTCCTCACGGATTCCCGTTGCTTCCTGGTGTGCATGTGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS TCA 72 bp CGTACTGGAACCTCTCTCGCGATCCCGCACCCAGCTTaGATTCAGCAAGAATCGAAAACAGGTGTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: RTGTSLAIPHPA*IQQESKTGVPP
Trigger: CGGGGGCACACCTGTTTTCGATTCTTGCTGAATTCAAGCTGGGTGCGGGATCGCGAGAGAGGTTCCAGTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524703.1
CDS TCA 72 bp CGCTGCTCAGGTACCCAGAGACCATTAACGCCTGGATaGAGGTCAGAAAGCACATGCACACCAGGAAGCAAC +
Preference number: 6 (lower is better)
Translates to: RCSGTQRPLTPG*RSESTCTPGSN
Trigger: GTTGCTTCCTGGTGTGCATGTGCTTTCTGACCTTCATCCAGGCGTTAATGGTCTCTGGGTACCTGAGCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS CAA 90 bp AAGTCCCAGAGCGCGGTATCAAACGAAACCGAAAATCCGTCTGCTTaGCCGAGAGCTAGGGAAGCCACAACCAAACAAAGAGATCCCGGC +
Preference number: 6 (lower is better)
Translates to: KSQSAVSNETENPSA*PRAREATTKQRDPG
Trigger: GCCGGGATCTCTTTGTTTGGTTGTGGCTTCCCTAGCTCTCGGCAAAGCAGACGGATTTTCGGTTTCGTTTGATACCGCGCTCTGGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532388.5
CDS TCA 72 bp CTTCGTCCATGGCGCTTAGAATTCAGATTTGATAGCTaGTGGCACCCAAGCACTCCGGCACGTTTCATCCAC +
Preference number: 6 (lower is better)
Translates to: LRPWRLEFRFDS*WHPSTPARFIH
Trigger: GTGGATGAAACGTGCCGGAGTGCTTGGGTGCCATCAGCTATCAAATCTGAATTCTAAGCGCCATGGACGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000532388.5
CDS GCA 72 bp GCGCGGTATCAAACGAAACCGAAAATCCGTCTGCTTTaGCGAGAGCTAGGGAAGCCACAACCAAACAAAGAG +
Preference number: 6 (lower is better)
Translates to: ARYQTKPKIRLL*RELGKPQPNKE
Trigger: CTCTTTGTTTGGTTGTGGCTTCCCTAGCTCTCGGCAAAGCAGACGGATTTTCGGTTTCGTTTGATACCGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532388.5
CDS CCA 72 bp ATTACGCTGCTCAGGTACCCAGAGACCATTAACGCCTaGATGAAGGTCAGAAAGCACATGCACACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: ITLLRYPETINA*MKVRKHMHTRK
Trigger: CTTCCTGGTGTGCATGTGCTTTCTGACCTTCATCCAGGCGTTAATGGTCTCTGGGTACCTGAGCAGCGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000528658.1
ENST00000530307.1
ENST00000532388.5
CDS TCA 72 bp TCTTTGATTCTTGCCCTCCTGCTTCCGTCTTTCCTTTaGTTACACTGGGCCCACCCAGGTCATCAGTTTCCA +
Preference number: 6 (lower is better)
Translates to: SLILALLLPSFL*LHWAHPGHQFP
Trigger: TGGAAACTGATGACCTGGGTGGGCCCAGTGTAATCAAAGGAAAGACGGAAGCAGGAGGGCAAGAATCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528658.1
CDS CCA 72 bp CCACAATTAACGTTGCAGCTTCCTGTCAGATTCCTATaGGGCATGGTGAGAGAAGGTCTAGGTACAAGGAGG +
Preference number: 6 (lower is better)
Translates to: PQLTLQLPVRFL*GMVREGLGTRR
Trigger: CCTCCTTGTACCTAGACCTTCTCTCACCATGCCCCATAGGAATCTGACAGGAAGCTGCAACGTTAATTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526750.1
CDS CAA 72 bp TTCTTTGATTCTTGCCCTCCTGCTTCCGTCTTTCCTTaGATTACACTGGGCCCACCCAGGTCATCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: FFDSCPPASVFP*ITLGPPRSSVS
Trigger: GGAAACTGATGACCTGGGTGGGCCCAGTGTAATCAAAGGAAAGACGGAAGCAGGAGGGCAAGAATCAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528658.1
CDS CAA 72 bp AGCGCGGTATCAAACGAAACCGAAAATCCGTCTGCTTaGCCGAGAGCTAGGGAAGCCACAACCAAACAAAGA +
Preference number: 6 (lower is better)
Translates to: SAVSNETENPSA*PRAREATTKQR
Trigger: TCTTTGTTTGGTTGTGGCTTCCCTAGCTCTCGGCAAAGCAGACGGATTTTCGGTTTCGTTTGATACCGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532388.5
CDS CAA 90 bp CGAATCTCCTTCTTTGATTCTTGCCCTCCTGCTTCCGTCTTTCCTTaGATTACACTGGGCCCACCCAGGTCATCAGTTTCCAATGAAACG +
Preference number: 6 (lower is better)
Translates to: RISFFDSCPPASVFP*ITLGPPRSSVSNET
Trigger: CGTTTCATTGGAAACTGATGACCTGGGTGGGCCCAGTGTAATCAAAGGAAAGACGGAAGCAGGAGGGCAAGAATCAAAGAAGGAGATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528658.1
CDS CAA 90 bp ATGCTGGCATTGGAGGCTGGGATACCAAACTGTGACTCGATGAACTaGGGAATGAAGGTAATGAAAGCAGTTACAATGGCACTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: MLALEAGIPNCDSMN*GMKVMKAVTMALSA
Trigger: AGCTGAGAGTGCCATTGTAACTGCTTTCATTACCTTCATTCCCAAGTTCATCGAGTCACAGTTTGGTATCCCAGCCTCCAATGCCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS CAA 90 bp CCACAGACTGGCTCATACTCGTGTATTTTACAACCACAATTAACGTaGCAGCTTCCTGTCAGATTCCTATGGGGCATGGTGAGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: PQTGSYSCILQPQLT*QLPVRFLWGMVREG
Trigger: ACCTTCTCTCACCATGCCCCATAGGAATCTGACAGGAAGCTGCAACGTTAATTGTGGTTGTAAAATACACGAGTATGAGCCAGTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000526750.1
ENST00000530307.1
CDS CAA 90 bp GCACTCTCAGCTGTGTATGACAAACTCACAAAAAGGAATGTCATGTaGCTTAAGATCCTGACAGCTGCTCTTGGTAGGTCTCTGACATCC +
Preference number: 6 (lower is better)
Translates to: ALSAVYDKLTKRNVM*LKILTAALGRSLTS
Trigger: GGATGTCAGAGACCTACCAAGAGCAGCTGTCAGGATCTTAAGCAACATGACATTCCTTTTTGTGAGTTTGTCATACACAGCTGAGAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS TCA 72 bp GGAGTAGGAATGTATGCTGAGTGTTACTATGATAGCTaGTGGTTGGGCACATGCTGTGATGAAGGTGACTAT +
Preference number: 6 (lower is better)
Translates to: GVGMYAECYYDS*WLGTCCDEGDY
Trigger: ATAGTCACCTTCATCACAGCATGTGCCCAACCATCAGCTATCATAGTAACACTCAGCATACATTCCTACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524945.5
CDS CAA 72 bp TTGGAGGCTGGGATACCAAACTGTGACTCGATGAACTaGGGAATGAAGGTAATGAAAGCAGTTACAATGGCA +
Preference number: 6 (lower is better)
Translates to: LEAGIPNCDSMN*GMKVMKAVTMA
Trigger: TGCCATTGTAACTGCTTTCATTACCTTCATTCCCAAGTTCATCGAGTCACAGTTTGGTATCCCAGCCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS CAA 72 bp GCTGTGTATGACAAACTCACAAAAAGGAATGTCATGTaGCTTAAGATCCTGACAGCTGCTCTTGGTAGGTCT +
Preference number: 6 (lower is better)
Translates to: AVYDKLTKRNVM*LKILTAALGRS
Trigger: AGACCTACCAAGAGCAGCTGTCAGGATCTTAAGCAACATGACATTCCTTTTTGTGAGTTTGTCATACACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260126.9
ENST00000524945.5
CDS CAA 72 bp TTGAAAAACATAGTAAAGACACACCACTGCAGATCATaGCTAGTTTTGCAGATTCTCTGGCACCAAGTTTCA +
Preference number: 6 (lower is better)
Translates to: LKNIVKTHHCRS*LVLQILWHQVS
Trigger: TGAAACTTGGTGCCAGAGAATCTGCAAAACTAGCAATGATCTGCAGTGGTGTGTCTTTACTATGTTTTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260126.9
ENST00000524945.5
ENST00000530307.1
ENST00000532388.5