Pregenerated sensors for SLCO4C1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173930Ensembl transcript IDs: ENST00000310954.7
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGGGCTGTGTGTGGCCTGTTAGGAATCGGGCCACACAGTTGGTaGGCTGAGAGGCAGGTGAGTGAGCATTACTGCCTGAGCTCCACC | + |
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Preference number: 1 (lower is better) Translates to: PWAVCGLLGIGPHSW*AERQVSEHYCLSST Trigger: GGTGGAGCTCAGGCAGTAATGCTCACTCACCTGCCTCTCAGCTCACCAACTGTGTGGCCCGATTCCTAACAGGCCACACACAGCCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR GCA 90 bp | GTGTGTGTTCGTGTGTGTGTGTGTGTGTGTGCTCGTGTGTGTGTGTaGTGTGTTTTGAGGCTTTACGTGGGCTTTGAAGGCACAGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: VCVRVCVCVCARVCV*CVLRLYVGFEGTGL Trigger: CAGACCTGTGCCTTCAAAGCCCACGTAAAGCCTCAAAACACAGCACACACACACACGAGCACACACACACACACACACACGAACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR GCA 90 bp | GCGTGTGTGTGTGTGTGTGTGTGTTCGTGTGTGTGTGTGTGTGTGTaGTCGTGTGTGTGTGTGCTGTGTTTTGAGGCTTTACGTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: ACVCVCVCSCVCVCV*SCVCVLCFEALRGL Trigger: AAGCCCACGTAAAGCCTCAAAACACAGCACACACACACACGAGCACACACACACACACACACACGAACACACACACACACACACACACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGCTCGTGTGTGTGTGTGCTGTGTTTTaGGGCTTTACGTGGGCTTTGAAGGCACAGGTCTGTTTCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVLVCVCAVF*GFTWALKAQVCFLH Trigger: ATGCAAGAAACAGACCTGTGCCTTCAAAGCCCACGTAAAGCCTCAAAACACAGCACACACACACACGAGCACACACACACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR GCA 90 bp | GTAGTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTaGACATGCAAGGGATCTAGGTTGCACTCTCCTTATGAGAATCTA | + |
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Preference number: 1 (lower is better) Translates to: VVALDSHRSAHSIGN*TCKGSRLHSPYENL Trigger: TAGATTCTCATAAGGAGAGTGCAACCTAGATCCCTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR CAA 90 bp | CGTGTGTGTGTGTGTGTGTGTGCTCGTGTGTGTGTGTGCTGTGTTTaGAGGCTTTACGTGGGCTTTGAAGGCACAGGTCTGTTTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: RVCVCVCARVCVCCV*RLYVGFEGTGLFLA Trigger: TGCAAGAAACAGACCTGTGCCTTCAAAGCCCACGTAAAGCCTCAAAACACAGCACACACACACACGAGCACACACACACACACACACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGCCTGATGGTCTGAGGTaGAGCAGTTTCATCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VALDSHRSAHSIGNCTCKPDGLR*SSFISK Trigger: TTTTGAGATGAAACTGCTCCACCTCAGACCATCAGG...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGGCATTTTTCTTTACTaGCTGGTACTTTCCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VALDSHRSAHSIGNCTCKGIFLY*LVLSSE Trigger: TTCAGAGGAAAGTACCAGTCAGTAAAGAAAAATGCC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGTACCTTCTTCCCCCATaGAAAAATTGTCTTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: VALDSHRSAHSIGNCTCKYLLPP*KNCLPQ Trigger: TTGTGGAAGACAATTTTTCCATGGGGGAAGAAGGTA...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGTATGATTGTCCATATTaGATAGATAATCCTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: VALDSHRSAHSIGNCTCKYDCPY*IDNPAM Trigger: CATGGCAGGATTATCTATCCAATATGGACAATCATA...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR GCA 72 bp | CGTGTGTGTGTGTGTGTGTGTGCTCGTGTGTGTGTGTaGTGTGTTTTGAGGCTTTACGTGGGCTTTGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: RVCVCVCARVCV*CVLRLYVGFEG Trigger: GCCTTCAAAGCCCACGTAAAGCCTCAAAACACAGCACACACACACACGAGCACACACACACACACACACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGCTCGTGTGTGTGTGTGCTGTGTTTTaGGGCTTTACGTGGGCTTTGAAGGCACAGGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: CVCVLVCVCAVF*GFTWALKAQVC Trigger: ACAGACCTGTGCCTTCAAAGCCCACGTAAAGCCTCAAAACACAGCACACACACACACGAGCACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGCCCTGGGCTGTGTGTaGCCTGTTAGGAATCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKALGCV*PVRNRA Trigger: GGCCCGATTCCTAACAGGCCACACACAGCCCAGGGC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGAGGGGTCCCCAGCCCTaGGCTGTGTGTGGCCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKRGPQP*AVCGLL Trigger: TAACAGGCCACACACAGCCCAGGGCTGGGGACCCCT...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGCTCGGACAGCGACAGTaGCCGGAGCTTCTCTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKLGQRQ*PELLFG Trigger: TCCGAAGAGAAGCTCCGGTCACTGTCGCTGTCCGAG...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| 3UTR CAA 72 bp | GTGTGTGTGTGTGCTCGTGTGTGTGTGTGCTGTGTTTaGAGGCTTTACGTGGGCTTTGAAGGCACAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: VCVCARVCVCCV*RLYVGFEGTGL Trigger: CAGACCTGTGCCTTCAAAGCCCACGTAAAGCCTCAAAACACAGCACACACACACACGAGCACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGCAGCGCTGGAGACATTaGGGATGGAAGTTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKQRWRH*GWKFLQ Trigger: CTGGAGGAACTTCCATCCTCAATGTCTCCAGCGCTG...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGCAGAGACTTCGATTTaGGAGGGCGACGCAGACAAG | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKAETSI*EGDADK Trigger: CTTGTCTGCGTCGCCCTCCCAAATCGAAGTCTCTGC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGTCTCTTCGGAGACATTaGGAGGGGCTGAAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKSLRRH*EGLKAE Trigger: CTCTGCCTTCAGCCCCTCCCAATGTCTCCGAAGAGA...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGCGGATCATCCTCAGTaGCATCAGTGCTTTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKADHPQ*HQCFLP Trigger: TGGGAGAAAGCACTGATGTCACTGAGGATGATCCGC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR GCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGCCCTCCAAGAGTAGCTaGGAAGCTGGATGTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKPSKSS*EAGCQS Trigger: GGATTGACATCCAGCTTCGCAGCTACTCTTGGAGGG...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGCTTTACGTGGGCTTTaGAGGCACAGGTCTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKALRGL*RHRSVS Trigger: AGAAACAGACCTGTGCCTTCAAAGCCCACGTAAAGC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGTGTGTGCTGTGTTTTaGGGCTTTACGTGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKVCAVF*GFTWAL Trigger: CAAAGCCCACGTAAAGCCTCAAAACACAGCACACAC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR GCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGCACTCCATTGGGAACTaGACATGCAAGGGATCTAGG | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKHSIGN*TCKGSR Trigger: CCTAGATCCCTTGCATGTGCAGTTCCCAATGGAGTG...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGCGGCGCAGGATGTCTaGGCTGGAGGGGACAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKAAQDV*AGGDKS Trigger: GCTTTTGTCCCCTCCAGCCCAGACATCCTGCGCCGC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGGCAGTTTCGCACAATaGGTTTCACATTTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKGSFAQ*VSHFPA Trigger: AGCTGGAAAATGTGAAACTCATTGTGCGAAACTGCC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGAGGGACCGTTGTCTGTaGTTAACACACCTTAGGATA | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKRDRCL*LTHLRI Trigger: TATCCTAAGGTGTGTTAATCACAGACAACGGTCCCT...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGAAGTTTTTCCAGCTTaGATTTCTGCTGTACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKEVFPA*ISAVPG Trigger: ACCAGGTACAGCAGAAATTCAAGCTGGAAAAACTTC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGTGTGCAACTGGGTTTaGACAGCCTGCAAAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKVCNWV*TACKAG Trigger: CCCTGCTTTGCAGGCTGTTCAAACCCAGTTGCACAC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGCATATGGGCCATCTTaGTGTTATCATAAATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKAYGPS*CYHKSS Trigger: GCTGGATTTATGATAACATCAAGATGGCCCATATGC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR GCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAAGCCTCCAGGTGTGTTaGAGCGCTGGAGACATTGAG | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKSLQVC*SAGDIE Trigger: CTCAATGTCTCCAGCGCTGCAACACACCTGGAGGCT...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGAGTTCTCAATACCTTTaGCGCTCTTCATGTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKSSQYL*RSSCLD Trigger: ATCCAGACATGAAGAGCGCCAAAGGTATTGAGAACT...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGCAGGGAGAAAAATATTaGACTCCATCTCCACAGACA | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKQGEKY*TPSPQT Trigger: TGTCTGTGGAGATGGAGTCCAATATTTTTCTCCCTG...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGGTTGTAATATACCTTTaGCTTCCTGTGTGCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKVVIYL*LPVCNW Trigger: CCAGTTGCACACAGGAAGCCAAAGGTATATTACAAC...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAACTACAATACCTTGCGTaGCGGCCAAGAGGCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKLQYLA*RPRGSS Trigger: ACTACTGCCTCTTGGCCGTCACGCAAGGTATTGTAG...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGAAATGCAAAGGAATATaGGCAGTTTCGCACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKKCKGI*AVSHNE Trigger: CTCATTGTGCGAAACTGCCCATATTCCTTTGCATTT...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGAGTGCACACTCCATTaGGAACTGCACATGCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKECTLH*ELHMQG Trigger: CCCTTGCATGTGCAGTTCCCAATGGAGTGTGCACTC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAAAGCCACCTAAAATTTaGCCGAGAGCAGCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKKPPKI*PRAAPG Trigger: TCCTGGAGCTGCTCTCGGTCAAATTTTAGGTGGCTT...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR GCA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGAAGATGTACAACTGGTaGTATTCCTTGTTGTTACAC | + |
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Preference number: 4 (lower is better) Translates to: VALDSHRSAHSIGNCTCKKMYNW*YSLLLH Trigger: GTGTAACAACAAGGAATAGCACCAGTTGTACATCTT...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR GCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGTGAGTGAGCATTACTaGCTGAGCTCCACCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKVSEHY*LSSTSC Trigger: ACAAGAGGTGGAGCTCAGGCAGTAATGCTCACTCAC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR GCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAATTAACTACAATACCTTaGGTGACGGCCAAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKLTTIP*VTAKRQ Trigger: CTGCCTCTTGGCCGTCACGCAAGGTATTGTAGTTAA...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGTGCAACTCCAGATGTaGACAGTGCAAACTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKVQLQM*TVQTSL Trigger: CAATGAAGTTTGCACTGTTCACATCTGGAGTTGCAC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR GCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAATCCAATCATAAAGGCTaGAAATGCAAGCCATCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKSNHKG*KCKPSR Trigger: CCGAGATGGCTTGCATTTGCAGCCTTTATGATTGGA...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAACTTCTGAAGCTCCTGTaGCTGAGAATTCTCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKLLKLL*LRILSL Trigger: CAAAGAGAGAATTCTCAGCCACAGGAGCTTCAGAAG...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAACCTGATGGTCTGAGGTaGAGCAGTTTCATCTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKPDGLR*SSFISK Trigger: TTTTGAGATGAAACTGCTCCACCTCAGACCATCAGG...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGAAAAATTGTGGCAATaGGAATACAAGTGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKEKLWQ*EYKCSQ Trigger: CTGGGAGCACTTGTATTCTCATTGCCACAATTTTTC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGAGAAGACTTGTGTGTaGGCACAGAATCATCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKEKTCV*AQNHQE Trigger: TTCTTGATGATTCTGTGCCCACACACAAGTCTTCTC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGCGAACAGTTACAATTaGCATTACAAGGGGCTATCA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKANSYN*HYKGLS Trigger: TGATAGCCCCTTGTAATGCCAATTGTAACTGTTCGC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAATCCAGTCCCATTATATaGTTCAGATACACCAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKSSPII*FRYTSK Trigger: TTTGCTGGTGTATCTGAATCATATAATGGGACTGGA...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGGCATTTTTCTTTACTaGCTGGTACTTTCCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKGIFLY*LVLSSE Trigger: TTCAGAGGAAAGTACCAGTCAGTAAAGAAAAATGCC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAACAACATCAATGTATATaGTTAGCAGTTGTCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKQHQCI*LAVVLP Trigger: TGGGAGGACAACTGCTAACCATATACATTGATGTTG...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAATGGCTACTAGCATATaGGCCATCTTGATGTTATCA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKMATSI*AILMLS Trigger: TGATAACATCAAGATGGCCCATATGCTAGTAGCCAT...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAATACCTTCTTCCCCCATaGAAAAATTGTCTTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKYLLPP*KNCLPQ Trigger: TTGTGGAAGACAATTTTTCCATGGGGGAAGAAGGTA...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAATTGAAGATGTACAACTaGTGCTATTCCTTGTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKLKMYN*CYSLLL Trigger: TAACAACAAGGAATAGCACCAGTTGTACATCTTCAA...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CCA 90 bp | GAATTCTCTCTTTGGGGGTCAGAGGACAAGGCAGAGACTTCGATTTaGGAGGGCGACGCAGACAAGCGGCGCAGGATGTCTGGGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: EFSLWGSEDKAETSI*EGDADKRRRMSGLE Trigger: CTCCAGCCCAGACATCCTGCGCCGCTTGTCTGCGTCGCCCTCCCAAATCGAAGTCTCTGCCTTGTCCTCTGACCCCCAAAGAGAGAATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CCA 90 bp | GACTTCGATTTGGGAGGGCGACGCAGACAAGCGGCGCAGGATGTCTaGGCTGGAGGGGACAAAAGCCAAGTTCTCAATACCTTTGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: DFDLGGRRRQAAQDV*AGGDKSQVLNTFGA Trigger: AGCGCCAAAGGTATTGAGAACTTGGCTTTTGTCCCCTCCAGCCCAGACATCCTGCGCCGCTTGTCTGCGTCGCCCTCCCAAATCGAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGATTAACTACAATACCTaGCGTGACGGCCAAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: VALDSHRSAHSIGNCTCKINYNT*RDGQEA Trigger: TGCCTCTTGGCCGTCACGCAAGGTATTGTAGTTAAT...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGCGCGAACAGTTACAATaGGCATTACAAGGGGCTATC | + |
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Preference number: 5 (lower is better) Translates to: VALDSHRSAHSIGNCTCKREQLQ*ALQGAI Trigger: GATAGCCCCTTGTAATGCCAATTGTAACTGTTCGCG...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGTGTGTGTGCTGTGTTTaGAGGCTTTACGTGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: VALDSHRSAHSIGNCTCKCVCCV*RLYVGF Trigger: AAAGCCCACGTAAAGCCTCAAAACACAGCACACACA...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGGCAGAGACTTCGATTaGGGAGGGCGACGCAGACAA | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKGRDFD*GGRRRQ Trigger: TTGTCTGCGTCGCCCTCCCAAATCGAAGTCTCTGCC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAATTCTCTTCGGAGACATaGGGAGGGGCTGAAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKFSSET*GGAEGR Trigger: TCTGCCTTCAGCCCCTCCCAATGTCTCCGAAGAGAA...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGCAGCGCTGGAGACATaGAGGATGGAAGTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKAALET*RMEVPP Trigger: TGGAGGAACTTCCATCCTCAATGTCTCCAGCGCTGC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGATGAAATATCGTAGCTaGATGAAATCAGGCCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: VALDSHRSAHSIGNCTCKMKYRS*MKSGQS Trigger: TGACTGGCCTGATTTCATCAAGCTACGATATTTCAT...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | GTGGCATTAGATTCTCATAGGAGTGCACACTCCATTGGGAACTGCACATGCAAGTGGTGCTATTCCTTGTaGTTACACAAGTGTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: VALDSHRSAHSIGNCTCKWCYSL*LHKCLQ Trigger: TTGAAGACACTTGTGTAACAACAAGGAATAGCACCA...CTTGCATGTGCAGTTCCCAATGGAGTGTGCACTCCTATGAGAATCTAATGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAATGTGTGCAACTGGGTTaGAACAGCCTGCAAAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKCVQLG*NSLQSR Trigger: CCTGCTTTGCAGGCTGTTCAAACCCAGTTGCACACA...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGGCTTTACGTGGGCTTaGAAGGCACAGGTCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKGFTWA*KAQVCF Trigger: GAAACAGACCTGTGCCTTCAAAGCCCACGTAAAGCC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAAAGTTCTCAATACCTTaGGCGCTCTTCATGTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKKFSIP*ALFMSG Trigger: TCCAGACATGAAGAGCGCCAAAGGTATTGAGAACTT...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAGGAAGTTTTTCCAGCTaGAATTTCTGCTGTACCTGG | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKGSFSS*NFCCTW Trigger: CCAGGTACAGCAGAAATTCAAGCTGGAAAAACTTCC...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAATGCAAGGGATCTAGGTaGCACTCTCCTTATGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKCKGSR*HSPYEN Trigger: ATTCTCATAAGGAGAGTGCAACCTAGATCCCTTGCA...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS TCA 90 bp | GGGAGAAAAATATTGGACTCCATCTCCACAGACAGGATAATAATATaGTCGCGAACAGTTACAATTGGCATTACAAGGGGCTATCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GRKILDSISTDRIII*SRTVTIGITRGYQV Trigger: AACTTGATAGCCCCTTGTAATGCCAATTGTAACTGTTCGCGATCATATTATTATCCTGTCTGTGGAGATGGAGTCCAATATTTTTCTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAAGTTGTAATATACCTTaGGCTTCCTGTGTGCAACTG | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKSCNIP*ASCVQL Trigger: CAGTTGCACACAGGAAGCCAAAGGTATATTACAACT...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCAATGTGTGTTCTTAAAAATCGAGGTAAATTTTCCAGGTGTAAAAACTGGTGCTATTCCTaGTTGTTACACAAGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: PAMAMCVLKNRGKFSRCKNWCYS*LLHKCL Trigger: AAGACACTTGTGTAACAACAAGGAATAGCACCAGTT...TTTACACCTGGAAAATTTACCTCGATTTTTAAGAACACACATTGCCATGGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS TCA 72 bp | GCCGTAAGACCCCTCCTCAAACTCGGACAGCGACAGTaGCCGGAGCTTCTCTTCGGAGACATTGGGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: AVRPLLKLGQRQ*PELLFGDIGRG Trigger: GCCCCTCCCAATGTCTCCGAAGAGAAGCTCCGGTCACTGTCGCTGTCCGAGTTTGAGGAGGGGTCTTACGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CCA 72 bp | TTGGGAGGGCGACGCAGACAAGCGGCGCAGGATGTCTaGGCTGGAGGGGACAAAAGCCAAGTTCTCAATACC | + |
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Preference number: 6 (lower is better) Translates to: LGGRRRQAAQDV*AGGDKSQVLNT Trigger: GGTATTGAGAACTTGGCTTTTGTCCCCTCCAGCCCAGACATCCTGCGCCGCTTGTCTGCGTCGCCCTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CCA 72 bp | CTTTGGGGGTCAGAGGACAAGGCAGAGACTTCGATTTaGGAGGGCGACGCAGACAAGCGGCGCAGGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: LWGSEDKAETSI*EGDADKRRRMS Trigger: AGACATCCTGCGCCGCTTGTCTGCGTCGCCCTCCCAAATCGAAGTCTCTGCCTTGTCCTCTGACCCCCAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 72 bp | TCTTTGGGGGTCAGAGGACAAGGCAGAGACTTCGATTaGGGAGGGCGACGCAGACAAGCGGCGCAGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: SLGVRGQGRDFD*GGRRRQAAQDV Trigger: GACATCCTGCGCCGCTTGTCTGCGTCGCCCTCCCAAATCGAAGTCTCTGCCTTGTCCTCTGACCCCCAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 72 bp | GACAGCGACAGTGACCGGAGCTTCTCTTCGGAGACATaGGGAGGGGCTGAAGGCAGAGATGGCTCTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: DSDSDRSFSSET*GGAEGRDGSGD Trigger: GTCACCAGAGCCATCTCTGCCTTCAGCCCCTCCCAATGTCTCCGAAGAGAAGCTCCGGTCACTGTCGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 90 bp | AGAATTCTCTCTTTGGGGGTCAGAGGACAAGGCAGAGACTTCGATTaGGGAGGGCGACGCAGACAAGCGGCGCAGGATGTCTGGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RILSLGVRGQGRDFD*GGRRRQAAQDVWAG Trigger: TCCAGCCCAGACATCCTGCGCCGCTTGTCTGCGTCGCCCTCCCAAATCGAAGTCTCTGCCTTGTCCTCTGACCCCCAAAGAGAGAATTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 72 bp | CAGAAAGCCTCCAGGTGTGTTGCAGCGCTGGAGACATaGAGGATGGAAGTTCCTCCAGCCGTAAGACCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QKASRCVAALET*RMEVPPAVRPL Trigger: GAGGGGTCTTACGGCTGGAGGAACTTCCATCCTCAATGTCTCCAGCGCTGCAACACACCTGGAGGCTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 90 bp | GTAGTGAAGCAGAAAGCCTCCAGGTGTGTTGCAGCGCTGGAGACATaGAGGATGGAAGTTCCTCCAGCCGTAAGACCCCTCCTCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: VVKQKASRCVAALET*RMEVPPAVRPLLKL Trigger: GAGTTTGAGGAGGGGTCTTACGGCTGGAGGAACTTCCATCCTCAATGTCTCCAGCGCTGCAACACACCTGGAGGCTTTCTGCTTCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 72 bp | GGGCTGGAGGGGACAAAAGCCAAGTTCTCAATACCTTaGGCGCTCTTCATGTCTGGATGGGTTCTCCCGACT | + |
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Preference number: 6 (lower is better) Translates to: GLEGTKAKFSIP*ALFMSGWVLPT Trigger: AGTCGGGAGAACCCATCCAGACATGAAGAGCGCCAAAGGTATTGAGAACTTGGCTTTTGTCCCCTCCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CCA 72 bp | CATAACCGGTTCCTATATAGAGAGAAGACTTGTGTGTaGGCACAGAATCATCAAGAAAGGCTGTTCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: HNRFLYREKTCV*AQNHQERLFPE Trigger: CTCTGGGAACAGCCTTTCTTGATGATTCTGTGCCCACACACAAGTCTTCTCTCTATATAGGAACCGGTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS TCA 72 bp | ATATTGGACTCCATCTCCACAGACAGGATAATAATATaGTCGCGAACAGTTACAATTGGCATTACAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILDSISTDRIII*SRTVTIGITRG Trigger: GCCCCTTGTAATGCCAATTGTAACTGTTCGCGATCATATTATTATCCTGTCTGTGGAGATGGAGTCCAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS TCA 72 bp | CCCCAATTTATATTCTCCACTGAAAAATTGTGGCAATaGGAATACAAGTGCTCCCAGTCCAATCATAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQFIFSTEKLWQ*EYKCSQSNHKG Trigger: GCCTTTATGATTGGACTGGGAGCACTTGTATTCTCATTGCCACAATTTTTCAGTGGAGAATATAAATTGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 72 bp | GTGAAGAAGTTGAAGATGTACAACTGGTGCTATTCCTaGTTGTTACACAAGTGTCTTCAAAAAGAGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VKKLKMYNWCYS*LLHKCLQKETP Trigger: TGGGGTCTCTTTTTGAAGACACTTGTGTAACAACAAGGAATAGCACCAGTTGTACATCTTCAACTTCTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 90 bp | CCATTATATGATTCAGATACACCAGCAAATGGCTCATTTTCACATTaGGCATACATAAATACAAAACTCAGCGTAAGTGCAACTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PLYDSDTPANGSFSH*AYINTKLSVSATPD Trigger: ATCTGGAGTTGCACTTACGCTGAGTTTTGTATTTATGTATGCCAAATGTGAAAATGAGCCATTTGCTGGTGTATCTGAATCATATAATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 90 bp | TCTGTGGCTGATGGAGGTGGTTTATACAAAAAGATTGCAAATCCATaGAAGAACATGGTGATAACTTTACAAGTAACACTTATGGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: SVADGGGLYKKIANP*KNMVITLQVTLMAT Trigger: AGTAGCCATAAGTGTTACTTGTAAAGTTATCACCATGTTCTTCAATGGATTTGCAATCTTTTTGTATAAACCACCTCCATCAGCCACAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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| CDS CAA 90 bp | AGAATGATACAAATAAAGACAACAAACAGAATGAAATATCGTAGCTaGATGAAATCAGGCCAGTCAGGGAACTCTTCATTTCATAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: RMIQIKTTNRMKYRS*MKSGQSGNSSFHNA Trigger: AGCGTTATGAAATGAAGAGTTCCCTGACTGGCCTGATTTCATCAAGCTACGATATTTCATTCTGTTTGTTGTCTTTATTTGTATCATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310954.7 |
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