RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLCO4A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101187

Ensembl transcript IDs: ENST00000217159.6, ENST00000370507.5, ENST00000451793.1, ENST00000466818.1, ENST00000466961.5, ENST00000470412.5, ENST00000495889.5, ENST00000497209.5, ENST00000497919.5

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGTCAGACGCTGCTCTaGAGCTGGCTATCTGTGGCACTGTCAGGGGCTGAGGACTGGCTG +
Preference number: 1 (lower is better)
Translates to: ARRGRVGAGGGQTLL*SWLSVALSGAEDWL
Trigger: CAGCCAGTCCTCAGCCCCTGACAGTGCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACCCGGCCACGGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 90 bp CGTGGCCGGGTGGGCGCGGGCGGTGGTCAGACGCTGCTCTGGAGCTaGCTATCTGTGGCACTGTCAGGGGCTGAGGACTGGCTGGGCAGA +
Preference number: 1 (lower is better)
Translates to: RGRVGAGGGQTLLWS*LSVALSGAEDWLGR
Trigger: TCTGCCCAGCCAGTCCTCAGCCCCTGACAGTGCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACCCGGCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 90 bp CCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTaGCCGGGTGGGCGCGGGCGGTGGTCAGACGCTGCTCTGGAGCTG +
Preference number: 1 (lower is better)
Translates to: PNGTVLSSGNAECPP*PGGRGRWSDAALEL
Trigger: CAGCTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR TCA 90 bp TGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTaGGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGTCAGACGC +
Preference number: 1 (lower is better)
Translates to: CDCITQRHCSVIRKC*VPAVAGWARAVVRR
Trigger: GCGTCTGACCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 90 bp ATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTaGCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGTCAGACGCTGCT +
Preference number: 1 (lower is better)
Translates to: IASPNGTVLSSGNAE*PPWPGGRGRWSDAA
Trigger: AGCAGCGTCTGACCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 90 bp GGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTaGAAGGAAAGCTCTGGACAAGCGCACACCCGACCCCAGCTTACC +
Preference number: 1 (lower is better)
Translates to: GVLLSQDLQSSASGC*KESSGQAHTRPQLT
Trigger: GGTAAGCTGGGGTCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 90 bp CCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTaGTGCAAGGAAAGCTCTGGACAAGCGCACACCCGACCCCAGCTT +
Preference number: 1 (lower is better)
Translates to: PGVLLSQDLQSSASG*CKESSGQAHTRPQL
Trigger: AAGCTGGGGTCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 90 bp GAATTCTGGTACACCAAGCAGGAGCCCTGCTGGCCACACTGGTCCTaGCACAGCAGACAGGCCTTGTCGATCACCCAGCCGAAGGCGATG +
Preference number: 1 (lower is better)
Translates to: EFWYTKQEPCWPHWS*HSRQALSITQPKAM
Trigger: CATCGCCTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGTGTACCAGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 90 bp ATGGCCGAATTCTGGTACACCAAGCAGGAGCCCTGCTGGCCACACTaGTCCTGCCACAGCAGACAGGCCTTGTCGATCACCCAGCCGAAG +
Preference number: 1 (lower is better)
Translates to: MAEFWYTKQEPCWPH*SCHSRQALSITQPK
Trigger: CTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGTGTACCAGAATTCGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 90 bp TCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGCAAGGAAAGCTCTaGACAAGCGCACACCCGACCCCAGCTTACCGTAGAGTTGCCGTT +
Preference number: 1 (lower is better)
Translates to: SGSAELRLRVLQGKL*TSAHPTPAYRRVAV
Trigger: AACGGCAACTCTACGGTAAGCTGGGGTCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGAGCTCTGCAGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 90 bp CTGCTCTGGAGCTGGCTATCTGTGGCACTGTCAGGGGCTGAGGACTaGCTGGGCAGACAAGTTTCCAGGCCATCTGAAGACTCCGACAGG +
Preference number: 1 (lower is better)
Translates to: LLWSWLSVALSGAED*LGRQVSRPSEDSDR
Trigger: CCTGTCGGAGTCTTCAGATGGCCTGGAAACTTGTCTGCCCAGCCAGTCCTCAGCCCCTGACAGTGCCACAGATAGCCAGCTCCAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 90 bp GGACACATCTGCAATAGAAAACCACAGCGTCAGCACCCACAGAAGTaGGGTTGCATGCCAAGTCACCCCCTAGGCCAGTGGCCTCCTGGA +
Preference number: 1 (lower is better)
Translates to: GHICNRKPQRQHPQK*GCMPSHPLGQWPPG
Trigger: TCCAGGAGGCCACTGGCCTAGGGGGTGACTTGGCATGCAACCCCACTTCTGTGGGTGCTGACGCTGTGGTTTTCTATTGCAGATGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 90 bp ACTGGATTCCCAGGGCAAAGGATCTCTGAGGGTCACGGACACATCTaGAATAGAAAACCACAGCGTCAGCACCCACAGAAGTGGGGTTGC +
Preference number: 1 (lower is better)
Translates to: TGFPGQRISEGHGHI*NRKPQRQHPQKWGC
Trigger: GCAACCCCACTTCTGTGGGTGCTGACGCTGTGGTTTTCTATTGCAGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCTGGGAATCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CAA 90 bp CAGGAGCCCTGCTGGCCACACTGGTCCTGCCACAGCAGACAGGCCTaGTCGATCACCCAGCCGAAGGCGATGGGCCCCGGGATGCCCCCT +
Preference number: 2 (lower is better)
Translates to: QEPCWPHWSCHSRQA*SITQPKAMGPGMPP
Trigger: AGGGGGCATCCCGGGGCCCATCGCCTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR CCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGAAGCAGGAGCCCTGCTaGCCACACTGGTCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRKQEPC*PHWSCH
Trigger: GTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTT...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR GCA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCGTTCCTCCCACCCACTaGAGGGCCGTACAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVVPPTH*RAVQLW
Trigger: CCAGAGCTGTACGGCCCTGCAGTGGGTGGGAGGAAC...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGGGGATTCACAGCCCCTaGGGAGTTTGTCCTCACGCA +
Preference number: 2 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWGIHSP*GVCPHA
Trigger: TGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCC...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACGTTCCTCCCACCCACTaGAGGGCCGTACAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHVPPTH*RAVQLW
Trigger: CCAGAGCTGTACGGCCCTGCAGTGGGTGGGAGGAAC...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR CCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAGGGCCGTACAGCTCTaGGGACAGGAGGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHRAVQL*GQEVTA
Trigger: GGCTGTGACCTCCTGTCCCCAGAGCTGTACGGCCCT...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR TCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGAGGGCAAAGGATCTCTaGGGGTCACGGACACATCTG +
Preference number: 2 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRRAKDL*GSRTHL
Trigger: CAGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCT...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR CCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAAGGGCCGTACAGCTCTaGGGACAGGAGGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTRAVQL*GQEVTA
Trigger: GGCTGTGACCTCCTGTCCCCAGAGCTGTACGGCCCT...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR CCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGCAGCACCCACAGAAGTaGGGTTGCATGCCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRQHPQK*GCMPSH
Trigger: GTGACTTGGCATGCAACCCCACTTCTGTGGGTGCTG...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR GCA 90 bp CAGGCCTTGTCGATCACCCAGCCGAAGGCGATGGGCCCCGGGATGCCCCCTAGTCCACAGAAGTGGGGTTaGATGCCAAGTCACCCCCTA +
Preference number: 2 (lower is better)
Translates to: QALSITQPKAMGPGMPPSPQKWG*MPSHPL
Trigger: TAGGGGGTGACTTGGCATGCAACCCCACTTCTGTGG...ACTAGGGGGCATCCCGGGGCCCATCGCCTTCGGCTGGGTGATCGACAAGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR GCA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCTCCGCCTCAGGGTGCTaGAAGGAAAGCTCTGGACAA +
Preference number: 2 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLSASGC*KESSGQ
Trigger: TTGTCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGA...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR TCA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCATAGAAGTTCCCGTGTaGTTGCATCACCCAACGGCA +
Preference number: 2 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVIEVPV*LHHPTA
Trigger: TGCCGTTGGGTGATGCAATCACACGGGAACTTCTAT...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACATCCTGTCTCAGGATCTaGAGAGCTCCGCCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTSCLRI*RAPPQG
Trigger: ACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGA...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR CCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACTGCAAGGAAAGCTCTaGACAAGCGCACACCCGACC +
Preference number: 2 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTLQGKL*TSAHPT
Trigger: GGTCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAG...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR TCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACATAGAAGTTCCCGTGTaGTTGCATCACCCAACGGCA +
Preference number: 2 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHIEVPV*LHHPTA
Trigger: TGCCGTTGGGTGATGCAATCACACGGGAACTTCTAT...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR TCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGATGCACAGTTTTAACTaGGGACACACAAGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRMHSFN*GHTSLP
Trigger: AGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCAT...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR TCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCCTCTCCTGCCACCAGTaGCAGACAGGCCCGCTTAGA +
Preference number: 2 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTILSCHQ*QTGPLR
Trigger: TCTAAGCGGGCCTGTCTGTCACTGGTGGCAGGAGAG...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR TCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACAGAGATCAGAGACAGTaGGGTCTCTCCTGCCACCAG +
Preference number: 2 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHRDQRQ*GLSCHQ
Trigger: CTGGTGGCAGGAGAGACCTCACTGTCTCTGATCTCT...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR GCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACGGGTGTTTCCTGGAGTaGTCCTGTCTCAGGATCTGC +
Preference number: 2 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHGCFLE*SCLRIC
Trigger: GCAGATCCTGAGACAGGAGCACTCCAGGAAACACCC...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CAA 90 bp GCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTaGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCT +
Preference number: 2 (lower is better)
Translates to: AGPPPSQWDSQPLRS*SSRTPHTIGYKTHS
Trigger: AGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR TCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGTCTATAAACACGTTCTaGTGCAAACTGTGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWSINTF*CKLCVH
Trigger: ATGGACACACAGTTTGCATCAGAACGTGTTTATAGA...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR CCA 90 bp GGCTGGGCAGACAAGTTTCCAGGCCATCTGAAGACTCCGACAGGGGCTTGTATAAGGGCCGTACAGCTCTaGGGACAGGAGGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: GWADKFPGHLKTPTGACIRAVQL*GQEVTA
Trigger: GGCTGTGACCTCCTGTCCCCAGAGCTGTACGGCCCT...TATACAAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACTTGTCTGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR TCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACGTCATCAGGAAATGCTaGGTGCCCGCCGTGGCCGGG +
Preference number: 2 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHVIRKC*VPAVAG
Trigger: CCCGGCCACGGCGGGCACTCAGCATTTCCTGATGAC...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR TCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCGTCATCAGGAAATGCTaGGTGCCCGCCGTGGCCGGG +
Preference number: 2 (lower is better)
Translates to: RVIASPNGTVLSSGNAECVIRKC*VPAVAG
Trigger: CCCGGCCACGGCGGGCACTCAGCATTTCCTGATGAC...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCTCAGGAAATGCTGAGTaGCCGCCGTGGCCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SICTVLTEDTQAFLRLQASGNAE*PPWPGG
Trigger: CCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGA...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTTCAGGAAATGCTGAGTaGCCGCCGTGGCCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHISGNAE*PPWPGG
Trigger: CCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGA...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCGTTCCTCCCACCCACTaGAGGGCCGTACAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SICTVLTEDTQAFLRLQAVPPTH*RAVQLW
Trigger: CCAGAGCTGTACGGCCCTGCAGTGGGTGGGAGGAAC...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR CCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCCTGCTGGCCACACTaGTCCTGCCACAGCAGACAG +
Preference number: 2 (lower is better)
Translates to: RVIASPNGTVLSSGNAECPCWPH*SCHSRQ
Trigger: CTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGG...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CAA 90 bp CTGGGCAGACAAGTTTCCAGGCCATCTGAAGACTCCGACAGGGGCTaGTATAAGAAGCAGGCTATGGCAAAGAAGAGGACGCCCAGCACC +
Preference number: 2 (lower is better)
Translates to: LGRQVSRPSEDSDRG*YKKQAMAKKRTPST
Trigger: GGTGCTGGGCGTCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACTTGTCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR TCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGTCTATAAACACGTTCTaGTGCAAACTGTGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTSINTF*CKLCVH
Trigger: ATGGACACACAGTTTGCATCAGAACGTGTTTATAGA...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATATCAGGAAATGCTGAGTaGCCGCCGTGGCCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSISGNAE*PPWPGG
Trigger: CCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGA...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAGTTCCCGTGTGATTaGATCACCCAACGGCACTGT +
Preference number: 2 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYKFPCD*ITQRHC
Trigger: ACAGTGCCGTTGGGTGATGCAATCACACGGGAACTT...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp AGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTCCTGTCTCAAAGTTCCCGTGTGATTaGATCACCCAACGGCACTGT +
Preference number: 2 (lower is better)
Translates to: SDRQARLDLGVSWSAPVSKFPCD*ITQRHC
Trigger: ACAGTGCCGTTGGGTGATGCAATCACACGGGAACTT...TGAGACAGGAGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR GCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCGGGATTCACAGCCCCTaGGGAGTTTGTCCTCACGCA +
Preference number: 2 (lower is better)
Translates to: SICTVLTEDTQAFLRLQAGIHSP*GVCPHA
Trigger: TGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCC...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACAGCTCCGCCTCAGGGTaGTGCAAGGAAAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHSSASG*CKESSG
Trigger: TCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGAGCT...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR CCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCGGTCAGACGCTGCTCTaGAGCTGGCTATCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: SICTVLTEDTQAFLRLQAGQTLL*SWLSVA
Trigger: TGCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACC...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR TCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGATGCACAGTTTTAACTaGGGACACACAAGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSMHSFN*GHTSLP
Trigger: AGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCAT...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR GCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAGTTCCTCCCACCCACTaGAGGGCCGTACAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIVPPTH*RAVQLW
Trigger: CCAGAGCTGTACGGCCCTGCAGTGGGTGGGAGGAAC...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR TCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTTCTATAAACACGTTCTaGTGCAAACTGTGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPSINTF*CKLCVH
Trigger: ATGGACACACAGTTTGCATCAGAACGTGTTTATAGA...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR TCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGAGTTTCCAGGCCATCTaGAGACTCCGACAGGGGCTT +
Preference number: 2 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTSFQAI*RLRQGL
Trigger: AAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACT...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR TCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGATAGAAGTTCCCGTGTaGTTGCATCACCCAACGGCA +
Preference number: 2 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTIEVPV*LHHPTA
Trigger: TGCCGTTGGGTGATGCAATCACACGGGAACTTCTAT...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR-3UTR TCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACTCTATAAACACGTTCTaGTGCAAACTGTGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHSINTF*CKLCVH
Trigger: ATGGACACACAGTTTGCATCAGAACGTGTTTATAGA...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR CCA 72 bp GCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTaGTCAGACGCTGCTCTGGAGCTGGCTATCTGTGGC +
Preference number: 3 (lower is better)
Translates to: AECPPWPGGRGR*SDAALELAICG
Trigger: GCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 72 bp CCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTaGCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGTCA +
Preference number: 3 (lower is better)
Translates to: PNGTVLSSGNAE*PPWPGGRGRWS
Trigger: TGACCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 72 bp GTGGGCGCGGGCGGTGGTCAGACGCTGCTCTGGAGCTaGCTATCTGTGGCACTGTCAGGGGCTGAGGACTGG +
Preference number: 3 (lower is better)
Translates to: VGAGGGQTLLWS*LSVALSGAEDW
Trigger: CCAGTCCTCAGCCCCTGACAGTGCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR TCA 72 bp ATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTaGGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTG +
Preference number: 3 (lower is better)
Translates to: ITQRHCSVIRKC*VPAVAGWARAV
Trigger: CACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR GCA 72 bp CAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTaGGGAGTTTGTCCTCACGCACACCACACACGATCG +
Preference number: 3 (lower is better)
Translates to: QAHRPPSGIHSP*GVCPHAHHTRS
Trigger: CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR GCA 72 bp TACACCAAGCAGGAGCCCTGCTGGCCACACTGGTCCTaGCACAGCAGACAGGCCTTGTCGATCACCCAGCCG +
Preference number: 3 (lower is better)
Translates to: YTKQEPCWPHWS*HSRQALSITQP
Trigger: CGGCTGGGTGATCGACAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 72 bp CTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTaGAAGGAAAGCTCTGGACAAGCGCACACCCGACCC +
Preference number: 3 (lower is better)
Translates to: LSQDLQSSASGC*KESSGQAHTRP
Trigger: GGGTCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 72 bp CTCATGGCCGAATTCTGGTACACCAAGCAGGAGCCCTaGTGGCCACACTGGTCCTGCCACAGCAGACAGGCC +
Preference number: 3 (lower is better)
Translates to: LMAEFWYTKQEP*WPHWSCHSRQA
Trigger: GGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGTGTACCAGAATTCGGCCATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 72 bp GCAGAGCTCCGCCTCAGGGTGCTGCAAGGAAAGCTCTaGACAAGCGCACACCCGACCCCAGCTTACCGTAGA +
Preference number: 3 (lower is better)
Translates to: AELRLRVLQGKL*TSAHPTPAYRR
Trigger: TCTACGGTAAGCTGGGGTCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGAGCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 72 bp CTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTaGTGCAAGGAAAGCTCTGGACAAGCGCACACCCGA +
Preference number: 3 (lower is better)
Translates to: LLSQDLQSSASG*CKESSGQAHTR
Trigger: TCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR GCA 72 bp CAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTaGTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAG +
Preference number: 3 (lower is better)
Translates to: QTGPLRPGCFLE*SCLRICRAPPQ
Trigger: CTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 72 bp ATGGCCGAATTCTGGTACACCAAGCAGGAGCCCTGCTaGCCACACTGGTCCTGCCACAGCAGACAGGCCTTG +
Preference number: 3 (lower is better)
Translates to: MAEFWYTKQEPC*PHWSCHSRQAL
Trigger: CAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGTGTACCAGAATTCGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR CAA 90 bp GTTTCCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGCAGCTTACCGTAGAGTaGCCGTTAGTGCAGGAATGC +
Preference number: 3 (lower is better)
Translates to: VSWSAPVSGSAELRLRVLQLTVE*PLVQEC
Trigger: GCATTCCTGCACTAACGGCAACTCTACGGTAAGCTG...CAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 72 bp TGCAATAGAAAACCACAGCGTCAGCACCCACAGAAGTaGGGTTGCATGCCAAGTCACCCCCTAGGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: CNRKPQRQHPQK*GCMPSHPLGQW
Trigger: CCACTGGCCTAGGGGGTGACTTGGCATGCAACCCCACTTCTGTGGGTGCTGACGCTGTGGTTTTCTATTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR CCA 72 bp AAGACTCCGACAGGGGCTTGTATAAGAAGCAGGCTATaGCAAAGAAGAGGACGCCCAGCACCTTGTACAGGA +
Preference number: 3 (lower is better)
Translates to: KTPTGACIRSRL*QRRGRPAPCTG
Trigger: TCCTGTACAAGGTGCTGGGCGTCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
3UTR-3UTR CAA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGCCCCTGCGGAGTTaGTCCTCACGCACACCACAC +
Preference number: 3 (lower is better)
Translates to: YISICTVLTEDTQAFLRLQPLRS*SSRTPH
Trigger: GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTG...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGGCGCGGCTTGTGCCCTaGGCCCCCGAAGTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWARLVP*APEVAD
Trigger: GTCAGCTACTTCGGGGGCTCAGGGCACAAGCCGCGC...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGCCACCGCCCTCCCAGTaGGATTCACAGCCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWPPPSQ*DSQPLR
Trigger: CCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGCCGGGGATGCCCTCCTaGTGGGTGGGGTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWPGMPS*WVGCGQ
Trigger: TTGACCACACCCCACCCAGCAGGAGGGCATCCCCGG...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGAGCTGGCAGAGGGGCTaGTTGCTGGTGTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWSWQRG*LLVSRG
Trigger: CCCCCTGGACACCAGCAAGCAGCCCCTCTGCCAGCT...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACCCGCACGCCACGCTCTaGCCGGCCGAGACGTACCGC +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHPHATL*PAETYR
Trigger: GCGGTACGTCTCGGCCGGGCAGAGCGTGGCGTGCGG...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTGCAGGCACGGCGGTaGGAAGGCCCACCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVLQARR*EGPPAA
Trigger: TGCGGCTGGTGGGCCTTCGCACCGCCGTGCCTGCAG...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCAGCCGCCCAGGAAGGTaGCGCCACCACCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVSRPGR*RHHPLA
Trigger: TGCCAGCGGGTGGTGGCGGCACCTTCCTGGGCGGCT...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCGCGCCTCCGCCTGGTaGCCTCGAGGCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTRASAW*PRGFSH
Trigger: GTGGCTGAAGCCTCGAGGTCACCAGGCGGAGGCGCG...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCCGCGCCTCCGCCTGGTaGCCTCGAGGCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLRASAW*PRGFSH
Trigger: GTGGCTGAAGCCTCGAGGTCACCAGGCGGAGGCGCG...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTTTCCGCCGCTCTCATaGCCGCGTAGCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRFPPLS*PRSAGS
Trigger: GCTCCCAGCGCTACGCGGTCATGAGAGCGGCGGAAA...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACGGGACAGGCCCGAGGTaGTGTCCGCACACACCGCGC +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHGTGPR*CPHTPR
Trigger: GCGCGGTGTGTGCGGACAGCACCTCGGGCCTGTCCC...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGTTCTCGGCCCAGAGCTaGCAGAGGGGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWFSAQS*QRGCLL
Trigger: CAGCAAGCAGCCCCTCTGCCAGCTCTGGGCCGAGAA...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGACAGTGGGCTCTCGGTaGTCAGCTCCGTCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRTVGSR*SAPSVG
Trigger: GCCGACGGACGGAGCTGACCACCGAGAGCCCACTGT...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAGTCCCCCGGGCGCCATaGTTCTCGGCCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTVPRAP*FSAQSW
Trigger: CCAGCTCTGGGCCGAGAAGCATGGCGCCCGGGGGAC...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGGTTCTGGCTGGCAGCTaGAGGCAGCGTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRVLAGS*RQRCRE
Trigger: CTCCCTGCAACGCTGCCTGCAGCTGCCAGCCAGAAC...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCGCCGCCACCACCCGCTaGCACCACCAGGTACCCAAA +
Preference number: 4 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVAATTR*HHQVPK
Trigger: TTTGGGTACCTGGTGGTGCCAGCGGGTGGTGGCGGC...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGAGGGCCGTACAGCTCTaGGGACAGGAGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRRAVQL*GQEVTA
Trigger: GGCTGTGACCTCCTGTCCCCAGAGCTGTACGGCCCT...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCCACCGCCCTCCCAGTaGGATTCACAGCCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTPPPSQ*DSQPLR
Trigger: CCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR CAA 72 bp TGCTGGCCACACTGGTCCTGCCACAGCAGACAGGCCTaGTCGATCACCCAGCCGAAGGCGATGGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: CWPHWSCHSRQA*SITQPKAMGPG
Trigger: CCCGGGGCCCATCGCCTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCGGATGGGAACGGCGGTaGAGAAAGCAGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLGWERR*RKQRPQ
Trigger: CTGGGGCCGCTGCTTTCTTCACCGCCGTTCCCATCC...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCTTTCCGCCGCTCTCATaGCCGCGTAGCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLFPPLS*PRSAGS
Trigger: GCTCCCAGCGCTACGCGGTCATGAGAGCGGCGGAAA...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAGGGTGTGCCCGGGGATaGCCTCCTGCTGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTGCARG*PPAGWG
Trigger: ACCCCACCCAGCAGGAGGGCATCCCCGGGCACACCC...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAGTCCCCCGGGCGCCATaGTTCTCGGCCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTVPRAP*FSAQSW
Trigger: CCAGCTCTGGGCCGAGAAGCATGGCGCCCGGGGGAC...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCTCAGGAAATGCTGAGTaGCCGCCGTGGCCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLSGNAE*PPWPGG
Trigger: CCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGA...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGAGCTCCGCCTCAGGGTaGTGCAAGGAAAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWSSASG*CKESSG
Trigger: TCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGAGCT...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCGCTTCAGCCACGCAGTaGGAGTGGCCTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLASATQ*EWPQRE
Trigger: CTCCCGCTGAGGCCACTCCCACTGCGTGGCTGAAGC...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAACGTACCGCACCTCATaGGTCCCCCGGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTTYRTS*VPRAPC
Trigger: GCATGGCGCCCGGGGGACCCATGAGGTGCGGTACGT...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACGCCGCCACCACCCGCTaGCACCACCAGGTACCCAAA +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHAATTR*HHQVPK
Trigger: TTTGGGTACCTGGTGGTGCCAGCGGGTGGTGGCGGC...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACGGTGGGCGCGGGCGGTaGTCAGACGCTGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHGGRGR*SDAALE
Trigger: CTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACC...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACCGTAGGAGCTGGCGATaGGCCCGCTCTGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHRRSWR*ARSGSC
Trigger: ACAGCTACCAGAGCGGGCTCATCGCCAGCTCCTACG...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GCGTCAGCACCCACAGAAGTGGGGTTGCATGCCAAGTCACCCCCTAGGCCAGTGGCGCGGCTTGTGCCCTaGGCCCCCGAAGTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ASAPTEVGLHAKSPPRPVARLVP*APEVAD
Trigger: GTCAGCTACTTCGGGGGCTCAGGGCACAAGCCGCGC...CACTGGCCTAGGGGGTGACTTGGCATGCAACCCCACTTCTGTGGGTGCTGACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACGGAACTGGCCCAGCATaGAGACCAGCTGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHGTGPA*RPAGSG
Trigger: CCCGCTACCAGCTGGTCTTCATGCTGGGCCAGTTCC...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCTCTCATCCAGGTAGGTaGCGCCCAGCGTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVSHPGR*RPACRG
Trigger: CCCTCTACACGCTGGGCGTCACCTACCTGGATGAGA...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCCGCACGCCACGCTCTaGCCGGCCGAGACGTACCGC +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDPHATL*PAETYR
Trigger: GCGGTACGTCTCGGCCGGGCAGAGCGTGGCGTGCGG...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGCACGCCACGCTCTaGCCGGCCGAGACGTACCGC +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWPHATL*PAETYR
Trigger: GCGGTACGTCTCGGCCGGGCAGAGCGTGGCGTGCGG...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAGAGGGGCTGCTTGCTaGTGTCCAGGGGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHRGAAC*CPGGYG
Trigger: CCCATAGCCCCCTGGACACCAGCAAGCAGCCCCTCT...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGCAAGACGTACCGCACCTCATaGGTCCCCCGGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: PGVLLSQDLQSSASGCCKTYRTS*VPRAPC
Trigger: GCATGGCGCCCGGGGGACCCATGAGGTGCGGTACGT...CTTGCAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACCCCTGCTGGCCACACTaGTCCTGCCACAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHPCWPH*SCHSRQ
Trigger: CTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGG...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGCTCATGGCCGAATTCTaGTACACCAAGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWLMAEF*YTKQEP
Trigger: GGGCTCCTGCTTGGTGTACCAGAATTCGGCCATGAG...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGGCTCCACTCACCTTCTaGCCGTCCACATTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRAPLTF*PSTFVS
Trigger: GGAGACGAATGTGGACGGCCAGAAGGTGAGTGGAGC...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAGCGCGGCTTGTGCCCTaGGCCCCCGAAGTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRARLVP*APEVAD
Trigger: GTCAGCTACTTCGGGGGCTCAGGGCACAAGCCGCGC...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAGGAACTGGCCCAGCATaGAGACCAGCTGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTGTGPA*RPAGSG
Trigger: CCCGCTACCAGCTGGTCTTCATGCTGGGCCAGTTCC...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCCGCCGTAGCTGGCTGTaGCGCCCGCCATGGGCACAC +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIRRSWL*RPPWAH
Trigger: GTGTGCCCATGGCGGGCGTCACAGCCAGCTACGGCG...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCCTCTCCTGCCACCAGTaGCAGACAGGCCCGCTTAGA +
Preference number: 4 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLLSCHQ*QTGPLR
Trigger: TCTAAGCGGGCCTGTCTGTCACTGGTGGCAGGAGAG...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATGTCCCCCGGGCGCCATaGTTCTCGGCCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDVPRAP*FSAQSW
Trigger: CCAGCTCTGGGCCGAGAAGCATGGCGCCCGGGGGAC...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCTGCAGGCACGGCGGTaGGAAGGCCCACCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGLQARR*EGPPAA
Trigger: TGCGGCTGGTGGGCCTTCGCACCGCCGTGCCTGCAG...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGACAGGCCCGAGGTaGTGTCCGCACACACCGCGC +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIGTGPR*CPHTPR
Trigger: GCGCGGTGTGTGCGGACAGCACCTCGGGCCTGTCCC...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCGGGACAGGCCCGAGGTaGTGTCCGCACACACCGCGC +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGGTGPR*CPHTPR
Trigger: GCGCGGTGTGTGCGGACAGCACCTCGGGCCTGTCCC...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGGGGTGTTTCCTGGAGTaGTCCTGTCTCAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRGCFLE*SCLRIC
Trigger: GCAGATCCTGAGACAGGAGCACTCCAGGAAACACCC...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACAGTGGGCTCTCGGTaGTCAGCTCCGTCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHTVGSR*SAPSVG
Trigger: GCCGACGGACGGAGCTGACCACCGAGAGCCCACTGT...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAACAGTGGGCTCTCGGTaGTCAGCTCCGTCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTTVGSR*SAPSVG
Trigger: GCCGACGGACGGAGCTGACCACCGAGAGCCCACTGT...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACGTAGCGCTGGGAGCCTaGCAGCTGCCGAGGGTAACC +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHVALGA*QLPRVT
Trigger: GGTTACCCTCGGCAGCTGCCAGGCTCCCAGCGCTAC...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGTGCATTTCCCTGCAGTaGCATGGCCAAAACCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWCISLQ*HGQNQR
Trigger: CCTCTGGTTTTGGCCATGCCACTGCAGGGAAATGCA...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCCAGCCGAAGGCGATaGGCCCCGGGATGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWPSRRR*APGCPL
Trigger: TAGGGGGCATCCCGGGGCCCATCGCCTTCGGCTGGG...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCCTGCTGGCCACACTaGTCCTGCCACAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTPCWPH*SCHSRQ
Trigger: CTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGG...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCTCAGGGGCTGAGGACTaGCTGGGCAGACAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVSGAED*LGRQVS
Trigger: GGAAACTTGTCTGCCCAGCCAGTCCTCAGCCCCTGA...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGCACCCCCTAGGCCAGTaGCCTCCTGGACCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: VSWSAPVSGSAELRLRVLHPLGQ*PPGPVP
Trigger: GGGGACTGGTCCAGGAGGCCACTGGCCTAGGGGGTG...CAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCGGCTTGTCCCCCAGCTaGTGCAGGGGCATCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGGLSPS*CRGISA
Trigger: CGCGGAGATGCCCCTGCATCAGCTGGGGGACAAGCC...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCTGCCCTTGGGCGTGTTaGGGACCTGCAGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTICPWAC*GPAGTA
Trigger: CGCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCA...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACATCTCATCCAGGTAGGTaGCGCCCAGCGTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTSHPGR*RPACRG
Trigger: CCCTCTACACGCTGGGCGTCACCTACCTGGATGAGA...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACCCAGGCAGAGCAGGATaGACGTGGGGTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHPGRAG*TWGSSA
Trigger: TGCTGAAGAACCCCACGTTCATCCTGCTCTGCCTGG...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTCGCCGTAGCTGGCTGTaGCGCCCGCCATGGGCACAC +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPRRSWL*RPPWAH
Trigger: GTGTGCCCATGGCGGGCGTCACAGCCAGCTACGGCG...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CAGGCCTTGTCGATCACCCAGCCGAAGGCGATGGGCCCCGGGATGCCCCCTAGTAGTTTCCAGGCCATCTaGAGACTCCGACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: QALSITQPKAMGPGMPPSSFQAI*RLRQGL
Trigger: AAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACT...ACTAGGGGGCATCCCGGGGCCCATCGCCTTCGGCTGGGTGATCGACAAGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAGCCGCCCAGGAAGGTaGCGCCACCACCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYSRPGR*RHHPLA
Trigger: TGCCAGCGGGTGGTGGCGGCACCTTCCTGGGCGGCT...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACGTTCTGGCTGGCAGCTaGAGGCAGCGTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHVLAGS*RQRCRE
Trigger: CTCCCTGCAACGCTGCCTGCAGCTGCCAGCCAGAAC...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACATTCGTCTCCGTGGCTaGAGGGCACCCTGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHIRLRG*RAPCVA
Trigger: TGCCACGCAGGGTGCCCTGCAGCCACGGAGACGAAT...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CCTGCCACCAGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTTCAGGAAATGCTGAGTaGCCGCCGTGGCCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PATSDRQARLDLGVSWSASGNAE*PPWPGG
Trigger: CCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGA...AGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACTGGTGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAGCTTCAGCCACGCAGTaGGAGTGGCCTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRASATQ*EWPQRE
Trigger: CTCCCGCTGAGGCCACTCCCACTGCGTGGCTGAAGC...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCTGCCACCAGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTGGGATGCCCTCCTGCTaGGTGGGGTGTGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: PATSDRQARLDLGVSWSAGMPSC*VGCGQA
Trigger: GGCTTGACCACACCCCACCCAGCAGGAGGGCATCCC...AGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACTGGTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGCGGCCAGCCGTGAAGTaGGGCAGCGCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSRPAVK*GSANTS
Trigger: GCTGGTGTTCGCGCTGCCCCACTTCACGGCTGGCCG...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGCCAGCCGTGAAGTaGGGCAGCGCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGRPAVK*GSANTS
Trigger: GCTGGTGTTCGCGCTGCCCCACTTCACGGCTGGCCG...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAGCGTGTAGAGGGGTGTaGCACCCACGCCATGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTACRGV*HPRHAG
Trigger: TCCTGCATGGCGTGGGTGCCACACCCCTCTACACGC...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTACAGGTAGCCGGCAGCTaGGCCCAGGATGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVQVAGS*AQDGRC
Trigger: ACAGCGGCCATCCTGGGCCCAGCTGCCGGCTACCTG...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CACCCGACCCCAGCTTACCGTAGAGTTGCCGTTAGTGCAGGAATGCTGCTGAGGCAGGTAGCCGGCAGCTaGGCCCAGGATGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: HPTPAYRRVAVSAGMLLRQVAGS*AQDGRC
Trigger: ACAGCGGCCATCCTGGGCCCAGCTGCCGGCTACCTG...CCTCAGCAGCATTCCTGCACTAACGGCAACTCTACGGTAAGCTGGGGTCGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTAGGCGCCGACCCACAGTaGGCTCTCGGTGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVGADPQ*ALGGQL
Trigger: GAGCTGACCACCGAGAGCCCACTGTGGGTCGGCGCC...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACCCACATTCGTCTCCGTaGCTGCAGGGCACCCTGCGT +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHPHSSP*LQGTLR
Trigger: ACGCAGGGTGCCCTGCAGCCACGGAGACGAATGTGG...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAAAGCAGGAGCCCTGCTaGCCACACTGGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTKQEPC*PHWSCH
Trigger: GTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTT...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGGGTCAGACGCTGCTCTaGAGCTGGCTATCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTGQTLL*SWLSVA
Trigger: TGCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACC...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCACCGCCCTCCCAGTaGGATTCACAGCCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWPPPSQ*DSQPLR
Trigger: CCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp GCCCAGCACCTTGTACAGGAGCCCCATGATGAGTATGTAGCGGCTCATGGCCGACATAGCGGCCAGCCGTaGAGTGGGGCAGCGCGAACA +
Preference number: 4 (lower is better)
Translates to: AQHLVQEPHDEYVAAHGRHSGQP*SGAART
Trigger: TGTTCGCGCTGCCCCACTTCACGGCTGGCCGCTATG...TCGGCCATGAGCCGCTACATACTCATCATGGGGCTCCTGTACAAGGTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCGGATGGGAACGGCGGTaGAGAAAGCAGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGGWERR*RKQRPQ
Trigger: CTGGGGCCGCTGCTTTCTTCACCGCCGTTCCCATCC...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGTCATCAGGAAATGCTaGGTGCCCGCCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSVIRKC*VPAVAG
Trigger: CCCGGCCACGGCGGGCACTCAGCATTTCCTGATGAC...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGTCATCAGGAAATGCTaGGTGCCCGCCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIVIRKC*VPAVAG
Trigger: CCCGGCCACGGCGGGCACTCAGCATTTCCTGATGAC...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp GGTCCTGCCACAGCAGACAGGCCTTGTCGATCACCCAGCCGAAGGCGATGGGCCAGGGCAAAGGATCTCTaGGGGTCACGGACACATCTG +
Preference number: 4 (lower is better)
Translates to: GPATADRPCRSPSRRRWARAKDL*GSRTHL
Trigger: CAGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCT...GGCCCATCGCCTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTGGCAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCCGGGGATGCCCTCCTaGTGGGTGGGGTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGPGMPS*WVGCGQ
Trigger: TTGACCACACCCCACCCAGCAGGAGGGCATCCCCGG...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCAGCTGGCAGAGGGGCTaGTTGCTGGTGTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGSWQRG*LLVSRG
Trigger: CCCCCTGGACACCAGCAAGCAGCCCCTCTGCCAGCT...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GCCCAGCACCTTGTACAGGAGCCCCATGATGAGTATGTAGCGGCTCATGGCCGAGGCGTGTTGAGGACCTaGAGGCACGGCGGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: AQHLVQEPHDEYVAAHGRGVLRT*RHGGAK
Trigger: CTTCGCACCGCCGTGCCTGCAGGTCCTCAACACGCC...TCGGCCATGAGCCGCTACATACTCATCATGGGGCTCCTGTACAAGGTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACATGGCCACACTGGTCCTaGCACAGCAGACAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTWPHWS*HSRQAL
Trigger: CAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCA...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAGCGGTGGTCAGACGCTaGTCTGGAGCTGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTAVVRR*SGAGYL
Trigger: CAGATAGCCAGCTCCAGAGCAGCGTCTGACCACCGC...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAGGGATTCACAGCCCCTaGGGAGTTTGTCCTCACGCA +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTGIHSP*GVCPHA
Trigger: TGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCC...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTAAAGCCTTCCTCAGGCTaGAGGCCCACCGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVKPSSG*RPTALP
Trigger: TGGGAGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTT...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGTCCGCCTCAGGGTGCTaGAAGGAAAGCTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTSASGC*KESSGQ
Trigger: TTGTCCAGAGCTTTCCTTGCAGCACCCTGAGGCGGA...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACCCACAGAAGTGGGGTTaGATGCCAAGTCACCCCCTA +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHPQKWG*MPSHPL
Trigger: TAGGGGGTGACTTGGCATGCAACCCCACTTCTGTGG...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGCTTCAGCCACGCAGTaGGAGTGGCCTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIASATQ*EWPQRE
Trigger: CTCCCGCTGAGGCCACTCCCACTGCGTGGCTGAAGC...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATGGGATGCCCTCCTGCTaGGTGGGGTGTGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDGMPSC*VGCGQA
Trigger: GGCTTGACCACACCCCACCCAGCAGGAGGGCATCCC...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATGTGTCCAGGGGGCTATaGGCAGCGGAGCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYVSRGL*AAERRE
Trigger: CTCCCTCCGCTCCGCTGCCCATAGCCCCCTGGACAC...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAAGAGGGGCTGCTTGCTaGTGTCCAGGGGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRRGAAC*CPGGYG
Trigger: CCCATAGCCCCCTGGACACCAGCAAGCAGCCCCTCT...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGTAGCGCTGGGAGCCTaGCAGCTGCCGAGGGTAACC +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSVALGA*QLPRVT
Trigger: GGTTACCCTCGGCAGCTGCCAGGCTCCCAGCGCTAC...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACAGGGCTGTAGTGTTCTaGCTGGCAGCTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHRAVVF*LAAAGS
Trigger: GCTGCCTGCAGCTGCCAGCCAGAACACTACAGCCCT...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCTGCCACCAGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTCCACATTCGTCTCCGTaGCTGCAGGGCACCCTGCGT +
Preference number: 4 (lower is better)
Translates to: PATSDRQARLDLGVSWSAPHSSP*LQGTLR
Trigger: ACGCAGGGTGCCCTGCAGCCACGGAGACGAATGTGG...AGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACTGGTGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCTGCCACCAGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTCCCTGCTGGCCACACTaGTCCTGCCACAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PATSDRQARLDLGVSWSAPCWPH*SCHSRQ
Trigger: CTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGG...AGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACTGGTGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACCTCATGGCCGAATTCTaGTACACCAAGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHLMAEF*YTKQEP
Trigger: GGGCTCCTGCTTGGTGTACCAGAATTCGGCCATGAG...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACATCAGGGGCTGAGGACTaGCTGGGCAGACAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTSGAED*LGRQVS
Trigger: GGAAACTTGTCTGCCCAGCCAGTCCTCAGCCCCTGA...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAGGAGCTGGCTATCTGTaGCACTGTCAGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTGAGYL*HCQGLR
Trigger: CCTCAGCCCCTGACAGTGCCACAGATAGCCAGCTCC...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGACGCTGCTCTGGAGCTaGCTATCTGTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTTLLWS*LSVALS
Trigger: TGACAGTGCCACAGATAGCCAGCTCCAGAGCAGCGT...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACGGACACATCTTCTaGCCGTCCACATTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTHGHIF*PSTFVS
Trigger: GGAGACGAATGTGGACGGCCAGAAGATGTGTCCGTG...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451793.1
CDS-3UTR TCA 90 bp CTGCAAGGAAAGCTCTGGACAAGCGCACACCCGACCCCAGCTTACCGTAGAGTTTGGCAGGGCACGTCCTaGCACCCGCGTCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: LQGKLWTSAHPTPAYRRVWQGTS*HPRPTP
Trigger: TGGAGTTGGACGCGGGTGTCAGGACGTGCCCTGCCA...AACTCTACGGTAAGCTGGGGTCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp TCATGGCCGAATTCTGGTACACCAAGCAGGAGCCCTGCTGGCCACACTGGTCCTGGAACTGGCCCAGCATaGAGACCAGCTGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: SWPNSGTPSRSPAGHTGPGTGPA*RPAGSG
Trigger: CCCGCTACCAGCTGGTCTTCATGCTGGGCCAGTTCC...AGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGTGTACCAGAATTCGGCCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp GTTTCCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGTCTCATCCAGGTAGGTaGCGCCCAGCGTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: VSWSAPVSGSAELRLRVLSHPGR*RPACRG
Trigger: CCCTCTACACGCTGGGCGTCACCTACCTGGATGAGA...CAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATTTTCCGCCGCTCTCATaGCCGCGTAGCGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYFPPLS*PRSAGS
Trigger: GCTCCCAGCGCTACGCGGTCATGAGAGCGGCGGAAA...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACCAGGCAGAGCAGGATaGACGTGGGGTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTPGRAG*TWGSSA
Trigger: TGCTGAAGAACCCCACGTTCATCCTGCTCTGCCTGG...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTGTCATCAGGAAATGCTaGGTGCCCGCCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPVIRKC*VPAVAG
Trigger: CCCGGCCACGGCGGGCACTCAGCATTTCCTGATGAC...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGACCAAGCAGGAGCCCTaGTGGCCACACTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSTKQEP*WPHWSC
Trigger: GCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGT...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCACCAAGCAGGAGCCCTaGTGGCCACACTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGTKQEP*WPHWSC
Trigger: GCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGT...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTTCAGGAAATGCTGAGTaGCCGCCGTGGCCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPSGNAE*PPWPGG
Trigger: CCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGA...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGTTCCTCCCACCCACTaGAGGGCCGTACAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIVPPTH*RAVQLW
Trigger: CCAGAGCTGTACGGCCCTGCAGTGGGTGGGAGGAAC...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAGCCTTCCTCAGGCTaGAGGCCCACCGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYKPSSG*RPTALP
Trigger: TGGGAGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTT...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCTGGTATCCGAGGGGCTaGTGTGTCCGTCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGWYPRG*CVRPRL
Trigger: GAGACGGGGACGGACACACCAGCCCCTCGGATACCA...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000497209.5
CDS-3UTR CCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATTGGTATCCGAGGGGCTaGTGTGTCCGTCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDWYPRG*CVRPRL
Trigger: GAGACGGGGACGGACACACCAGCCCCTCGGATACCA...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000497209.5
CDS-3UTR CCA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTAGCGGGAGTGGCCAAGTaGTATCCGAGGGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVAGVAK*YPRGWC
Trigger: ACACCAGCCCCTCGGATACCACTTGGCCACTCCCGC...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCTTCTCGGCCCAGAGCTaGCAGAGGGGCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIFSAQS*QRGCLL
Trigger: CAGCAAGCAGCCCCTCTGCCAGCTCTGGGCCGAGAA...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAACGCCATGCAGGAACTaGCCCAGCATGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTTPCRN*PSMKTS
Trigger: GCTGGTCTTCATGCTGGGCCAGTTCCTGCATGGCGT...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCGCGTGTAGAGGGGTGTaGCACCCACGCCATGCAGGA +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGACRGV*HPRHAG
Trigger: TCCTGCATGGCGTGGGTGCCACACCCCTCTACACGC...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCCCACATTCGTCTCCGTaGCTGCAGGGCACCCTGCGT +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIPHSSP*LQGTLR
Trigger: ACGCAGGGTGCCCTGCAGCCACGGAGACGAATGTGG...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GAGCCCCATGATGAGTATGTAGCGGCTCATGGCCGAATTCTGGTACACCAAGCACCCAGCCGAAGGCGATaGGCCCCGGGATGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: EPHDEYVAAHGRILVHQAPSRRR*APGCPL
Trigger: TAGGGGGCATCCCGGGGCCCATCGCCTTCGGCTGGG...TGCTTGGTGTACCAGAATTCGGCCATGAGCCGCTACATACTCATCATGGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCCCTGCTGGCCACACTaGTCCTGCCACAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDPCWPH*SCHSRQ
Trigger: CTGTCTGCTGTGGCAGGACCAGTGTGGCCAGCAGGG...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAGGGCTGAGGACTGGCTaGGCAGACAAGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRGLRTG*ADKFPG
Trigger: GCCTGGAAACTTGTCTGCCCAGCCAGTCCTCAGCCC...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCTGCCACCAGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTGGAGCTGGCTATCTGTaGCACTGTCAGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PATSDRQARLDLGVSWSAGAGYL*HCQGLR
Trigger: CCTCAGCCCCTGACAGTGCCACAGATAGCCAGCTCC...AGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACTGGTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGAGGGCCGTACAGCTCTaGGGACAGGAGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWRAVQL*GQEVTA
Trigger: GGCTGTGACCTCCTGTCCCCAGAGCTGTACGGCCCT...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGAGGGCCGTACAGCTCTaGGGACAGGAGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSRAVQL*GQEVTA
Trigger: GGCTGTGACCTCCTGTCCCCAGAGCTGTACGGCCCT...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCGCGCCTCCGCCTGGTaGCCTCGAGGCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQARASAW*PRGFSH
Trigger: GTGGCTGAAGCCTCGAGGTCACCAGGCGGAGGCGCG...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTCGTAGGAGCTGGCGATaGGCCCGCTCTGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPRRSWR*ARSGSC
Trigger: ACAGCTACCAGAGCGGGCTCATCGCCAGCTCCTACG...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATCGTAGGAGCTGGCGATaGGCCCGCTCTGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYRRSWR*ARSGSC
Trigger: ACAGCTACCAGAGCGGGCTCATCGCCAGCTCCTACG...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAAGAGAGGCAGGTCTCTaGTGGTTTTCCCAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTREAGL*WFSQSP
Trigger: CGGACTTTGGGAAAACCATCAGAGACCTGCCTCTCT...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGCGGAGCCCCGGAGCCTaGGCTTGTTCACAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSRSPGA*ACSQRS
Trigger: GCTTCTTTGTGAACAAGCTCAGGCTCCGGGGCTCCG...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CAAGCGCACACCCGACCCCAGCTTACCGTAGAGTTGCCGTTAGTGCAGGAATGCCGGAGCCCCGGAGCCTaGGCTTGTTCACAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QAHTRPQLTVELPLVQECRSPGA*ACSQRS
Trigger: GCTTCTTTGTGAACAAGCTCAGGCTCCGGGGCTCCG...GCATTCCTGCACTAACGGCAACTCTACGGTAAGCTGGGGTCGGGTGTGCGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCGCCGTAGCTGGCTGTaGCGCCCGCCATGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECRRSWL*RPPWAH
Trigger: GTGTGCCCATGGCGGGCGTCACAGCCAGCTACGGCG...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACAAGGGCAAAGGATCTCTaGGGGTCACGGACACATCGT +
Preference number: 4 (lower is better)
Translates to: ALPVGFTAPAEFVLTHTTRAKDL*GSRTHR
Trigger: ACGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCT...TGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000370507.5
CDS-3UTR GCA 90 bp GGCTGGGCAGACAAGTTTCCAGGCCATCTGAAGACTCCGACAGGGGCTTGTATAAGCTGGCAGAGGGGCTaGTTGCTGGTGTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GWADKFPGHLKTPTGACISWQRG*LLVSRG
Trigger: CCCCCTGGACACCAGCAAGCAGCCCCTCTGCCAGCT...TATACAAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACTTGTCTGCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCTGCAGGCACGGCGGTaGGAAGGCCCACCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHLQARR*EGPPAA
Trigger: TGCGGCTGGTGGGCCTTCGCACCGCCGTGCCTGCAG...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCTGCCACCAGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTCATCCCCTGCAGGAATaGGGCCGCACACAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PATSDRQARLDLGVSWSAHPLQE*GRTQEE
Trigger: TTCTTCCTGTGTGCGGCCGCATTCCTGCAGGGGATG...AGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACTGGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTGTGGCACCCACGCCATaGAGGAACTGGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPVAPTP*RNWPSM
Trigger: CATGCTGGGCCAGTTCCTGCATGGCGTGGGTGCCAC...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CACCCGACCCCAGCTTACCGTAGAGTTGCCGTTAGTGCAGGAATGCTGCTGAGGTCGCCTCCCCACGGCTaGTGTCCTTCAACTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HPTPAYRRVAVSAGMLLRSPPHG*CPSTGA
Trigger: TGCACCAGTTGAAGGACAGCAGCCGTGGGGAGGCGA...CCTCAGCAGCATTCCTGCACTAACGGCAACTCTACGGTAAGCTGGGGTCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp GGCTGGGCAGACAAGTTTCCAGGCCATCTGAAGACTCCGACAGGGGCTTGTATATCCCAAAGTCCGGGTTaGTCGCCTCCCCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: GWADKFPGHLKTPTGACISQSPG*SPPHGC
Trigger: GCAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGA...TATACAAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACTTGTCTGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCAGCCGCCCAGGAAGGTaGCGCCACCACCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQASRPGR*RHHPLA
Trigger: TGCCAGCGGGTGGTGGCGGCACCTTCCTGGGCGGCT...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTGTTCTGGCTGGCAGCTaGAGGCAGCGTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPVLAGS*RQRCRE
Trigger: CTCCCTGCAACGCTGCCTGCAGCTGCCAGCCAGAAC...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATATTCGTCTCCGTGGCTaGAGGGCACCCTGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYIRLRG*RAPCVA
Trigger: TGCCACGCAGGGTGCCCTGCAGCCACGGAGACGAAT...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGTGGCCACACTGGTCCTaGCACAGCAGACAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSWPHWS*HSRQAL
Trigger: CAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCA...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTACCAAGCAGGAGCCCTaGTGGCCACACTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPTKQEP*WPHWSC
Trigger: GCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGT...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATGCGGTGGTCAGACGCTaGTCTGGAGCTGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDAVVRR*SGAGYL
Trigger: CAGATAGCCAGCTCCAGAGCAGCGTCTGACCACCGC...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAGGGATTCACAGCCCCTaGGGAGTTTGTCCTCACGCA +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRGIHSP*GVCPHA
Trigger: TGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCC...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGCTGCTGGGTGGGGTGTaGTCAAGCCCGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: VSWSAPVSGSAELRLRVLLLGGV*SSPFSM
Trigger: CATGGAAAACGGGCTTGACCACACCCCACCCAGCAG...CAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATTGCCCTCCTGCTGGGTaGGGTGTGGTCAAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYCPPAG*GVVKPV
Trigger: AACGGGCTTGACCACACCCCACCCAGCAGGAGGGCA...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GAGCCCCATGATGAGTATGTAGCGGCTCATGGCCGAATTCTGGTACACCAAGCAGTGTCCAGGGGGCTATaGGCAGCGGAGCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: EPHDEYVAAHGRILVHQAVSRGL*AAERRE
Trigger: CTCCCTCCGCTCCGCTGCCCATAGCCCCCTGGACAC...TGCTTGGTGTACCAGAATTCGGCCATGAGCCGCTACATACTCATCATGGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAGCAGGGCACCCTGCGTaGCACAGTGAGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRAGHPA*HSEKYM
Trigger: CATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGC...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCGTATGTAGCGGCTCATaGCCGAATTCTGGTACACCA +
Preference number: 4 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLVCSGS*PNSGTP
Trigger: TGGTGTACCAGAATTCGGCCATGAGCCGCTACATAC...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCGGAGCTGGCTATCTGTaGCACTGTCAGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGGAGYL*HCQGLR
Trigger: CCTCAGCCCCTGACAGTGCCACAGATAGCCAGCTCC...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGGGTCAGACGCTGCTCTaGAGCTGGCTATCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VSWSAPVSGSAELRLRVLGQTLL*SWLSVA
Trigger: TGCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACC...CAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACGGTGGGCGCGGGCGGTaGTCAGACGCTGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHGGRGR*SDAALE
Trigger: CTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACC...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR CAA 72 bp CCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTaGTCCTCACGCACACCACACACGATCGGGTATAAA +
Preference number: 4 (lower is better)
Translates to: PPSQWDSQPLRS*SSRTPHTIGYK
Trigger: TTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp CACCCGACCCCAGCTTACCGTAGAGTTGCCGTTAGTGCAGGAATGCTGCTGAGGCCAGGCAGAGCAGGATaGACGTGGGGTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HPTPAYRRVAVSAGMLLRPGRAG*TWGSSA
Trigger: TGCTGAAGAACCCCACGTTCATCCTGCTCTGCCTGG...CCTCAGCAGCATTCCTGCACTAACGGCAACTCTACGGTAAGCTGGGGTCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATCGGAGCCCCGGAGCCTaGGCTTGTTCACAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYRSPGA*ACSQRS
Trigger: GCTTCTTTGTGAACAAGCTCAGGCTCCGGGGCTCCG...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCACAGTGAGAAGTACATaGGGCCGTCCGAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGTVRST*GRPSRT
Trigger: TGTGCGGCTCGGACGGCCTCATGTACTTCTCACTGT...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGAGGAGGGGCTTTCTCTaGCAAGTTGAAGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTRRGFL*QVEVHF
Trigger: GAAATGCACTTCAACTTGTCAGAGAAAGCCCCTCCT...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGTTCACAGTCATCCCCTaGAGGAATGCGGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWFTVIP*RNAAAH
Trigger: GTGTGCGGCCGCATTCCTGCAGGGGATGACTGTGAA...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCAGCTGCAGGCAGCGTTaGAGGGAGCCGTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGSCRQR*REPLGS
Trigger: TGAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCT...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CAAGCGCACACCCGACCCCAGCTTACCGTAGAGTTGCCGTTAGTGCAGGAATGCAGCTGCAGGCAGCGTTaGAGGGAGCCGTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QAHTRPQLTVELPLVQECSCRQR*REPLGS
Trigger: TGAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCT...GCATTCCTGCACTAACGGCAACTCTACGGTAAGCTGGGGTCGGGTGTGCGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAAAGTTCCCGTGTGATTaGATCACCCAACGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTKFPCD*ITQRHC
Trigger: ACAGTGCCGTTGGGTGATGCAATCACACGGGAACTT...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGATTCACAGCCCCTaGGGAGTTTGTCCTCACGCA +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIGIHSP*GVCPHA
Trigger: TGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCC...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGGGTCACGGACACATCTaGAATAGAAAACCACAGCGT +
Preference number: 4 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTGHGHI*NRKPQR
Trigger: ACGCTGTGGTTTTCTATTGCAGATGTGTCCGTGACC...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp GGAAAGCTCTGGACAAGCGCACACCCGACCCCAGCTTACCGTAGAGTTGCCGTTTCCTGTCTCAGGATCTaGAGAGCTCCGCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GKLWTSAHPTPAYRRVAVSCLRI*RAPPQG
Trigger: ACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGA...AACGGCAACTCTACGGTAAGCTGGGGTCGGGTGTGCGCTTGTCCAGAGCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCTGCTGGGTGGGGTGTaGTCAAGCCCGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGLLGGV*SSPFSM
Trigger: CATGGAAAACGGGCTTGACCACACCCCACCCAGCAG...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCAGGTAGCCGGCAGCTaGGCCCAGGATGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHQVAGS*AQDGRC
Trigger: ACAGCGGCCATCCTGGGCCCAGCTGCCGGCTACCTG...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACGGCGCCGACCCACAGTaGGCTCTCGGTGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHGADPQ*ALGGQL
Trigger: GAGCTGACCACCGAGAGCCCACTGTGGGTCGGCGCC...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTAGGGCTGTAGTGTTCTaGCTGGCAGCTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPRAVVF*LAAAGS
Trigger: GCTGCCTGCAGCTGCCAGCCAGAACACTACAGCCCT...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTCCTGTCTCAAGGGCTGTAGTGTTCTaGCTGGCAGCTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SDRQARLDLGVSWSAPVSRAVVF*LAAAGS
Trigger: GCTGCCTGCAGCTGCCAGCCAGAACACTACAGCCCT...TGAGACAGGAGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGGCAGGGCACCCTGCGTaGCACAGTGAGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWAGHPA*HSEKYM
Trigger: CATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGC...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACTGCATTTCCCTGCAGTaGCATGGCCAAAACCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHCISLQ*HGQNQR
Trigger: CCTCTGGTTTTGGCCATGCCACTGCAGGGAAATGCA...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGTCAGGGGCTGAGGACTaGCTGGGCAGACAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSSGAED*LGRQVS
Trigger: GGAAACTTGTCTGCCCAGCCAGTCCTCAGCCCCTGA...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAACGCTGCTCTGGAGCTaGCTATCTGTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRTLLWS*LSVALS
Trigger: TGACAGTGCCACAGATAGCCAGCTCCAGAGCAGCGT...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTCAGACGCTGCTCTaGAGCTGGCTATCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSGQTLL*SWLSVA
Trigger: TGCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACC...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CTGAAGACTCCGACAGGGGCTTGTATAAGAAGCAGGCTATGGCAAAGAAGAGGAGGTGGGCGCGGGCGGTaGTCAGACGCTGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LKTPTGACIRSRLWQRRGGGRGR*SDAALE
Trigger: CTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACC...TCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCCACCGCCCTCCCAGTaGGATTCACAGCCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQAPPPSQ*DSQPLR
Trigger: CCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGACAGCACCCACAGAAGTaGGGTTGCATGCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRQHPQK*GCMPSH
Trigger: GTGACTTGGCATGCAACCCCACTTCTGTGGGTGCTG...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTTGCCCTTGGGCGTGTTaGGGACCTGCAGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVCPWAC*GPAGTA
Trigger: CGCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCA...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CTGAAGACTCCGACAGGGGCTTGTATAAGAAGCAGGCTATGGCAAAGAAGAGGATGCCCTTGGGCGTGTTaGGGACCTGCAGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: LKTPTGACIRSRLWQRRGCPWAC*GPAGTA
Trigger: CGCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCA...TCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCATAGCGGCCAGCCGTaGAGTGGGGCAGCGCGAACA +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIHSGQP*SGAART
Trigger: TGTTCGCGCTGCCCCACTTCACGGCTGGCCGCTATG...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACCTTTCTCTGACAAGTTaGAGTGCATTTCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHLSLTS*SAFPCS
Trigger: ACTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAG...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAAGGAGGGGCTTTCTCTaGCAAGTTGAAGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTRRGFL*QVEVHF
Trigger: GAAATGCACTTCAACTTGTCAGAGAAAGCCCCTCCT...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCAGTTTCCAGGCCATCTaGAGACTCCGACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HHPTALFCHQEMLSARRGSFQAI*RLRQGL
Trigger: AAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACT...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTAAGTTTCCAGGCCATCTaGAGACTCCGACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVSFQAI*RLRQGL
Trigger: AAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACT...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CTGGATTCCCAGGGCAAAGGATCTCTGAGGGTCACGGACACATCTGCAATAGAACCGGGGATGCCCTCCTaGTGGGTGGGGTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LDSQGKGSLRVTDTSAIEPGMPS*WVGCGQ
Trigger: TTGACCACACCCCACCCAGCAGGAGGGCATCCCCGG...TTCTATTGCAGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCTGGGAATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCTCCCAAAGTCCGGGTTaGTCGCCTCCCCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECSQSPG*SPPHGC
Trigger: GCAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGA...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACAAGTTCCCGTGTGATTaGATCACCCAACGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHKFPCD*ITQRHC
Trigger: ACAGTGCCGTTGGGTGATGCAATCACACGGGAACTT...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCAAGCCTTCCTCAGGCTaGAGGCCCACCGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECKPSSG*RPTALP
Trigger: TGGGAGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTT...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTCTGCTGGGTGGGGTGTaGTCAAGCCCGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPLLGGV*SSPFSM
Trigger: CATGGAAAACGGGCTTGACCACACCCCACCCAGCAG...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCGGGATGCCCTCCTGCTaGGTGGGGTGTGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQAGMPSC*VGCGQA
Trigger: GGCTTGACCACACCCCACCCAGCAGGAGGGCATCCC...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTACGTACCGCACCTCATaGGTCCCCCGGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVTYRTS*VPRAPC
Trigger: GCATGGCGCCCGGGGGACCCATGAGGTGCGGTACGT...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTACTGCTGTCCTTCAACTaGTGCATTTCCGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVLLSFN*CISAAL
Trigger: GAGAGCGGCGGAAATGCACCAGTTGAAGGACAGCAG...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCTGCTGTCCTTCAACTaGTGCATTTCCGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDLLSFN*CISAAL
Trigger: GAGAGCGGCGGAAATGCACCAGTTGAAGGACAGCAG...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATGCACTCAGGCTGAACTaGGACTCCAAGAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDALRLN*DSKNLG
Trigger: CCCCAAGTTCTTGGAGTCCCAGTTCAGCCTGAGTGC...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACAATAAGAAGCAGGCTATaGCAAAGAAGAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTIRSRL*QRRGRP
Trigger: TGGGCGTCCTCTTCTTTGCCATAGCCTGCTTCTTAT...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGACGCTGCTCTGGAGCTaGCTATCTGTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSTLLWS*LSVALS
Trigger: TGACAGTGCCACAGATAGCCAGCTCCAGAGCAGCGT...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCAGGTGGGCGCGGGCGGTaGTCAGACGCTGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSGGRGR*SDAALE
Trigger: CTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACC...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATCTGCAAGGAAAGCTCTaGACAAGCGCACACCCGACC +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYLQGKL*TSAHPT
Trigger: GGTCGGGTGTGCGCTTGTCCAGAGCTTTCCTTGCAG...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGCAAGCCAGAGGAAAGATTCTaGGGGATACAGCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: PGVLLSQDLQSSASGCCKPEERF*GIQLQS
Trigger: AGACTGTAGCTGTATCCCTCAGAATCTTTCCTCTGG...CTTGCAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAATAGAAGTTCCCGTGTaGTTGCATCACCCAACGGCA +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRIEVPV*LHHPTA
Trigger: TGCCGTTGGGTGATGCAATCACACGGGAACTTCTAT...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTGGCGTGTTGAGGACCTaGAGGCACGGCGGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVGVLRT*RHGGAK
Trigger: CTTCGCACCGCCGTGCCTGCAGGTCCTCAACACGCC...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTGTGGCACCCACGCCATaGAGGAACTGGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIVAPTP*RNWPSM
Trigger: CATGCTGGGCCAGTTCCTGCATGGCGTGGGTGCCAC...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp TCTGCAATAGAAAACCACAGCGTCAGCACCCACAGAAGTGGGGTTGCATGCCAAGTGGCACCCACGCCATaGAGGAACTGGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: SAIENHSVSTHRSGVACQVAPTP*RNWPSM
Trigger: CATGCTGGGCCAGTTCCTGCATGGCGTGGGTGCCAC...TTGGCATGCAACCCCACTTCTGTGGGTGCTGACGCTGTGGTTTTCTATTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCTGTCCTTCAACTGGTaGATTTCCGCCGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWLSFNW*ISAALM
Trigger: CATGAGAGCGGCGGAAATGCACCAGTTGAAGGACAG...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGAAAGTTCCCGTGTGATTaGATCACCCAACGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRKFPCD*ITQRHC
Trigger: ACAGTGCCGTTGGGTGATGCAATCACACGGGAACTT...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCTGCCCTCCTGCTGGGTaGGGTGTGGTCAAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECCPPAG*GVVKPV
Trigger: AACGGGCTTGACCACACCCCACCCAGCAGGAGGGCA...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACAGAGGGGCTGCTTGCTaGTGTCCAGGGGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHRGAAC*CPGGYG
Trigger: CCCATAGCCCCCTGGACACCAGCAAGCAGCCCCTCT...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCAGGCGCCGACCCACAGTaGGCTCTCGGTGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSGADPQ*ALGGQL
Trigger: GAGCTGACCACCGAGAGCCCACTGTGGGTCGGCGCC...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTGTAGCGCTGGGAGCCTaGCAGCTGCCGAGGGTAACC +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVVALGA*QLPRVT
Trigger: GGTTACCCTCGGCAGCTGCCAGGCTCCCAGCGCTAC...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGACAGACAGGCCCGCTTAGACCTGGGTGTTTCCTGGAGTGCTCCTGTCTCACTGCTGTCCTTCAACTaGTGCATTTCCGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SDRQARLDLGVSWSAPVSLLSFN*CISAAL
Trigger: GAGAGCGGCGGAAATGCACCAGTTGAAGGACAGCAG...TGAGACAGGAGCACTCCAGGAAACACCCAGGTCTAAGCGGGCCTGTCTGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTGCCGCCACCACCCGCTaGCACCACCAGGTACCCAAA +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVAATTR*HHQVPK
Trigger: TTTGGGTACCTGGTGGTGCCAGCGGGTGGTGGCGGC...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CAATCCACTGGATTCCCAGGGCAAAGGATCTCTGAGGGTCACGGACACATCTGCGCAGGGCACCCTGCGTaGCACAGTGAGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: QSTGFPGQRISEGHGHICAGHPA*HSEKYM
Trigger: CATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGC...GCAGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCTGGGAATCCAGTGGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCCACATTCGTCTCCGTaGCTGCAGGGCACCCTGCGT +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHPHSSP*LQGTLR
Trigger: ACGCAGGGTGCCCTGCAGCCACGGAGACGAATGTGG...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCTGCATTTCCCTGCAGTaGCATGGCCAAAACCAGAGG +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTICISLQ*HGQNQR
Trigger: CCTCTGGTTTTGGCCATGCCACTGCAGGGAAATGCA...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATACCCAGCCGAAGGCGATaGGCCCCGGGATGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIPSRRR*APGCPL
Trigger: TAGGGGGCATCCCGGGGCCCATCGCCTTCGGCTGGG...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACAAGCAGGAGCCCTGCTaGCCACACTGGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHKQEPC*PHWSCH
Trigger: GTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTT...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTAAGCAGGAGCCCTGCTaGCCACACTGGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIKQEPC*PHWSCH
Trigger: GTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTT...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTCTCATGGCCGAATTCTaGTACACCAAGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPLMAEF*YTKQEP
Trigger: GGGCTCCTGCTTGGTGTACCAGAATTCGGCCATGAG...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCAGGATGGGAACGGCGGTaGAGAAAGCAGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSGWERR*RKQRPQ
Trigger: CTGGGGCCGCTGCTTTCTTCACCGCCGTTCCCATCC...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGATAGAAGTTCCCGTGTaGTTGCATCACCCAACGGCA +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSIEVPV*LHHPTA
Trigger: TGCCGTTGGGTGATGCAATCACACGGGAACTTCTAT...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGGGGTGTGCCCGGGGATaGCCTCCTGCTGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTGCARG*PPAGWG
Trigger: ACCCCACCCAGCAGGAGGGCATCCCCGGGCACACCC...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCAGGCGTGTTGAGGACCTaGAGGCACGGCGGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSGVLRT*RHGGAK
Trigger: CTTCGCACCGCCGTGCCTGCAGGTCCTCAACACGCC...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCTCGCCTCCCCACGGCTaGTGTCCTTCAACTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECSPPHG*CPSTGA
Trigger: TGCACCAGTTGAAGGACAGCAGCCGTGGGGAGGCGA...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTATTCGTCTCCGTGGCTaGAGGGCACCCTGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVIRLRG*RAPCVA
Trigger: TGCCACGCAGGGTGCCCTGCAGCCACGGAGACGAAT...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CTGGATTCCCAGGGCAAAGGATCTCTGAGGGTCACGGACACATCTGCAATAGAATGGCCACACTGGTCCTaGCACAGCAGACAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LDSQGKGSLRVTDTSAIEWPHWS*HSRQAL
Trigger: CAAGGCCTGTCTGCTGTGGCAGGACCAGTGTGGCCA...TTCTATTGCAGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCTGGGAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCGCGGTGGTCAGACGCTaGTCTGGAGCTGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECAVVRR*SGAGYL
Trigger: CAGATAGCCAGCTCCAGAGCAGCGTCTGACCACCGC...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CTGAAGACTCCGACAGGGGCTTGTATAAGAAGCAGGCTATGGCAAAGAAGAGGAGCGGGAGTGGCCAAGTaGTATCCGAGGGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LKTPTGACIRSRLWQRRGAGVAK*YPRGWC
Trigger: ACACCAGCCCCTCGGATACCACTTGGCCACTCCCGC...TCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAGTGTCCAGGGGGCTATaGGCAGCGGAGCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIVSRGL*AAERRE
Trigger: CTCCCTCCGCTCCGCTGCCCATAGCCCCCTGGACAC...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTGCGTGTAGAGGGGTGTaGCACCCACGCCATGCAGGA +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVACRGV*HPRHAG
Trigger: TCCTGCATGGCGTGGGTGCCACACCCCTCTACACGC...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGCCCAGCCGAAGGCGATaGGCCCCGGGATGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTPSRRR*APGCPL
Trigger: TAGGGGGCATCCCGGGGCCCATCGCCTTCGGCTGGG...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGTATGTAGCGGCTCATaGCCGAATTCTGGTACACCA +
Preference number: 4 (lower is better)
Translates to: QWDSQPLRSLSSRTPHTIVCSGS*PNSGTP
Trigger: TGGTGTACCAGAATTCGGCCATGAGCCGCTACATAC...GATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATGTATGTAGCGGCTCATaGCCGAATTCTGGTACACCA +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDVCSGS*PNSGTP
Trigger: TGGTGTACCAGAATTCGGCCATGAGCCGCTACATAC...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGGTATGTAGCGGCTCATaGCCGAATTCTGGTACACCA +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWVCSGS*PNSGTP
Trigger: TGGTGTACCAGAATTCGGCCATGAGCCGCTACATAC...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTCCTGTCTCAGGATCTGCAGAGCTCCGCCTCAGGGTGCTGATAAGAAGCAGGCTATaGCAAAGAAGAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: VSWSAPVSGSAELRLRVLIRSRL*QRRGRP
Trigger: TGGGCGTCCTCTTCTTTGCCATAGCCTGCTTCTTAT...CAGCACCCTGAGGCGGAGCTCTGCAGATCCTGAGACAGGAGCACTCCAGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTGGGCTGAGGACTGGCTaGGCAGACAAGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIGLRTG*ADKFPG
Trigger: GCCTGGAAACTTGTCTGCCCAGCCAGTCCTCAGCCC...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCGGGCTGAGGACTGGCTaGGCAGACAAGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQAGLRTG*ADKFPG
Trigger: GCCTGGAAACTTGTCTGCCCAGCCAGTCCTCAGCCC...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCGGAGCTGGCTATCTGTaGCACTGTCAGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECGAGYL*HCQGLR
Trigger: CCTCAGCCCCTGACAGTGCCACAGATAGCCAGCTCC...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATATGGCAGGGCACGTCCTaGCACCCGCGTCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIWQGTS*HPRPTP
Trigger: TGGAGTTGGACGCGGGTGTCAGGACGTGCCCTGCCA...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCACAGTGAGAAGTACATaGGGCCGTCCGAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECTVRST*GRPSRT
Trigger: TGTGCGGCTCGGACGGCCTCATGTACTTCTCACTGT...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp TCTGCAATAGAAAACCACAGCGTCAGCACCCACAGAAGTGGGGTTGCATGCCAAACAGTGAGAAGTACATaGGGCCGTCCGAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: SAIENHSVSTHRSGVACQTVRST*GRPSRT
Trigger: TGTGCGGCTCGGACGGCCTCATGTACTTCTCACTGT...TTGGCATGCAACCCCACTTCTGTGGGTGCTGACGCTGTGGTTTTCTATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACATCTATAAACACGTTCTaGTGCAAACTGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTSINTF*CKLCVH
Trigger: ATGGACACACAGTTTGCATCAGAACGTGTTTATAGA...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCATCCCCTGCAGGAATaGGGCCGCACACAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIHPLQE*GRTQEE
Trigger: TTCTTCCTGTGTGCGGCCGCATTCCTGCAGGGGATG...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGGCCACGCAGTGGGAGTaGCCTCAGCGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTATQWE*PQREWP
Trigger: TGGCCACTCCCGCTGAGGCCACTCCCACTGCGTGGC...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATGCCCTCCTGCTGGGTaGGGTGTGGTCAAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSCPPAG*GVVKPV
Trigger: AACGGGCTTGACCACACCCCACCCAGCAGGAGGGCA...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGCGGCCAGCCGTGAAGTaGGGCAGCGCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTRPAVK*GSANTS
Trigger: GCTGGTGTTCGCGCTGCCCCACTTCACGGCTGGCCG...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCACGCCATGCAGGAACTaGCCCAGCATGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQATPCRN*PSMKTS
Trigger: GCTGGTCTTCATGCTGGGCCAGTTCCTGCATGGCGT...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp AAGACTCCGACAGGGGCTTGTATAAGAAGCAGGCTATGGCAAAGAAGAGGACGCACGCCATGCAGGAACTaGCCCAGCATGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: KTPTGACIRSRLWQRRGRTPCRN*PSMKTS
Trigger: GCTGGTCTTCATGCTGGGCCAGTTCCTGCATGGCGT...GCGTCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp GGCTGGGCAGACAAGTTTCCAGGCCATCTGAAGACTCCGACAGGGGCTTGTATAGGTACCCAAACAAGGTaGCAGCTTCTGAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: GWADKFPGHLKTPTGACIGTQTR*QLLRHS
Trigger: TGAGTGCCTCAGAAGCTGCCACCTTGTTTGGGTACC...TATACAAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACTTGTCTGCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGACTAACTACAATCCACTaGATTCCCAGGGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRLTTIH*IPRAKD
Trigger: ATCCTTTGCCCTGGGAATCCAGTGGATTGTAGTTAG...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGATAAGAAGCAGGCTATaGCAAAGAAGAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSIRSRL*QRRGRP
Trigger: TGGGCGTCCTCTTCTTTGCCATAGCCTGCTTCTTAT...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACGGTCAGACGCTGCTCTaGAGCTGGCTATCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHGQTLL*SWLSVA
Trigger: TGCCACAGATAGCCAGCTCCAGAGCAGCGTCTGACC...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGGGCTTGTCCCCCAGCTaGTGCAGGGGCATCTCCGCG +
Preference number: 4 (lower is better)
Translates to: YISICTVLTEDTQAFLRLGLSPS*CRGISA
Trigger: CGCGGAGATGCCCCTGCATCAGCTGGGGGACAAGCC...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGCATAGCGGCCAGCCGTaGAGTGGGGCAGCGCGAACA +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTHSGQP*SGAART
Trigger: TGTTCGCGCTGCCCCACTTCACGGCTGGCCGCTATG...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCTGAGGCACTCAGGCTaGACTGGGACTCCAAGAACT +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECLRHSG*TGTPRT
Trigger: AGTTCTTGGAGTCCCAGTTCAGCCTGAGTGCCTCAG...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCTGAGGCACTCAGGCTaGACTGGGACTCCAAGAACT +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHLRHSG*TGTPRT
Trigger: AGTTCTTGGAGTCCCAGTTCAGCCTGAGTGCCTCAG...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCTTTCTCTGACAAGTTaGAGTGCATTTCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWLSLTS*SAFPCS
Trigger: ACTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAG...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTAGGGCAAAGGATCTCTaGGGGTCACGGACACATCGT +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIRAKDL*GSRTHR
Trigger: ACGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCT...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000370507.5
CDS-3UTR TCA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTAATGCACAGTTTTAACTaGGGACACACAAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVMHSFN*GHTSLP
Trigger: AGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCAT...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTAGAGATCAGAGACAGTaGGGTCTCTCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIRDQRQ*GLSCHQ
Trigger: CTGGTGGCAGGAGAGACCTCACTGTCTCTGATCTCT...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp GAGCCCCATGATGAGTATGTAGCGGCTCATGGCCGAATTCTGGTACACCAAGCACTGTCCTTCAACTGGTaGATTTCCGCCGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: EPHDEYVAAHGRILVHQALSFNW*ISAALM
Trigger: CATGAGAGCGGCGGAAATGCACCAGTTGAAGGACAG...TGCTTGGTGTACCAGAATTCGGCCATGAGCCGCTACATACTCATCATGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR GCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGTCCCAAAGTCCGGGTTaGTCGCCTCCCCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTSQSPG*SPPHGC
Trigger: GCAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGA...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAATTCGTCTCCGTGGCTaGAGGGCACCCTGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIIRLRG*RAPCVA
Trigger: TGCCACGCAGGGTGCCCTGCAGCCACGGAGACGAAT...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGAAGCCTTCCTCAGGCTaGAGGCCCACCGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTKPSSG*RPTALP
Trigger: TGGGAGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTT...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCCGCTGTGTAGAAGATaGCAATGTAGACGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIPLCRR*QCRRAS
Trigger: GCTCGCCCGTCTACATTGCCATCTTCTACACAGCGG...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCCGCTGTGTAGAAGATaGCAATGTAGACGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHPLCRR*QCRRAS
Trigger: GCTCGCCCGTCTACATTGCCATCTTCTACACAGCGG...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCTCTCGGTACACCTTCTaGCCGTCCACATTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECSRYTF*PSTFVS
Trigger: GGAGACGAATGTGGACGGCCAGAAGGTGTACCGAGA...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000370507.5
CDS-3UTR CCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCACGCTGCTCTGGAGCTaGCTATCTGTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQATLLWS*LSVALS
Trigger: TGACAGTGCCACAGATAGCCAGCTCCAGAGCAGCGT...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGTGGCAGGGCACGTCCTaGCACCCGCGTCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: YISICTVLTEDTQAFLRLWQGTS*HPRPTP
Trigger: TGGAGTTGGACGCGGGTGTCAGGACGTGCCCTGCCA...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCAGAGAGGCAGGTCTCTaGTGGTTTTCCCAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQAREAGL*WFSQSP
Trigger: CGGACTTTGGGAAAACCATCAGAGACCTGCCTCTCT...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCAGAGAGGCAGGTCTCTaGTGGTTTTCCCAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECREAGL*WFSQSP
Trigger: CGGACTTTGGGAAAACCATCAGAGACCTGCCTCTCT...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCAGGGCAAAGGATCTCTaGGGGTCACGGACACATCTT +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQARAKDL*GSRTHL
Trigger: AAGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCT...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451793.1
CDS-3UTR GCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGACCAAGCAGGAGCCCTaGTGGCCACACTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTTKQEP*WPHWSC
Trigger: GCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTTGGT...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAGCGGTGGTCAGACGCTaGTCTGGAGCTGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIAVVRR*SGAGYL
Trigger: CAGATAGCCAGCTCCAGAGCAGCGTCTGACCACCGC...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGGTTCCTCCCACCCACTaGAGGGCCGTACAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTVPPTH*RAVQLW
Trigger: CCAGAGCTGTACGGCCCTGCAGTGGGTGGGAGGAAC...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp ATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACGGTACCCAAACAAGGTaGCAGCTTCTGAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: ICTVLTEDTQAFLRLQAHGTQTR*QLLRHS
Trigger: TGAGTGCCTCAGAAGCTGCCACCTTGTTTGGGTACC...GTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCAGCAGGGCACCCTGCGTaGCACAGTGAGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSAGHPA*HSEKYM
Trigger: CATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGC...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CTGAAGACTCCGACAGGGGCTTGTATAAGAAGCAGGCTATGGCAAAGAAGAGGACTCATGGCCGAATTCTaGTACACCAAGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LKTPTGACIRSRLWQRRGLMAEF*YTKQEP
Trigger: GGGCTCCTGCTTGGTGTACCAGAATTCGGCCATGAG...TCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATAAATTACAACGAATATaGAAACCAGAAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDKLQRI*KPEGGA
Trigger: AGCCCCTCCTTCTGGTTTTCATATTCGTTGTAATTT...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCATAGAAGTTCCCGTGTaGTTGCATCACCCAACGGCA +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECIEVPV*LHHPTA
Trigger: TGCCGTTGGGTGATGCAATCACACGGGAACTTCTAT...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR TCA 90 bp GCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGTCTATAAACACGTTCTaGTGCAAACTGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: ASPNGTVLSSGNAECPPWSINTF*CKLCVH
Trigger: ATGGACACACAGTTTGCATCAGAACGTGTTTATAGA...CCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATACATCCCCTGCAGGAATaGGGCCGCACACAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIHPLQE*GRTQEE
Trigger: TTCTTCCTGTGTGCGGCCGCATTCCTGCAGGGGATG...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGTCGCCTCCCCACGGCTaGTGTCCTTCAACTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTSPPHG*CPSTGA
Trigger: TGCACCAGTTGAAGGACAGCAGCCGTGGGGAGGCGA...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTAAGTTCCCGTGTGATTaGATCACCCAACGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIKFPCD*ITQRHC
Trigger: ACAGTGCCGTTGGGTGATGCAATCACACGGGAACTT...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGAAGCAGGAGCCCTGCTaGCCACACTGGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YISICTVLTEDTQAFLRLKQEPC*PHWSCH
Trigger: GTGGCAGGACCAGTGTGGCCAGCAGGGCTCCTGCTT...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
3UTR CAA 72 bp CAAGTTTCCAGGCCATCTGAAGACTCCGACAGGGGCTaGTATAAGAAGCAGGCTATGGCAAAGAAGAGGACG +
Preference number: 4 (lower is better)
Translates to: QVSRPSEDSDRG*YKKQAMAKKRT
Trigger: CGTCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATACTGAGGCACTCAGGCTaGACTGGGACTCCAAGAACT +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSILRHSG*TGTPRT
Trigger: AGTTCTTGGAGTCCCAGTTCAGCCTGAGTGCCTCAG...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCAGAGGAAAGATTCTaGGGGATACAGCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECPEERF*GIQLQS
Trigger: AGACTGTAGCTGTATCCCTCAGAATCTTTCCTCTGG...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAATTACAACGAATATaGAAACCAGAAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYKLQRI*KPEGGA
Trigger: AGCCCCTCCTTCTGGTTTTCATATTCGTTGTAATTT...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTATAGAAGTTCCCGTGTaGTTGCATCACCCAACGGCA +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVIEVPV*LHHPTA
Trigger: TGCCGTTGGGTGATGCAATCACACGGGAACTTCTAT...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGTTCACAGTCATCCCCTaGAGGAATGCGGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTFTVIP*RNAAAH
Trigger: GTGTGCGGCCGCATTCCTGCAGGGGATGACTGTGAA...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR GCA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGAGCTGCAGGCAGCGTTaGAGGGAGCCGTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: YISICTVLTEDTQAFLRLSCRQR*REPLGS
Trigger: TGAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCT...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGGCACTCAGGCTGAACTaGGACTCCAAGAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTALRLN*DSKNLG
Trigger: CCCCAAGTTCTTGGAGTCCCAGTTCAGCCTGAGTGC...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAGGTACCCAAACAAGGTaGCAGCTTCTGAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIGTQTR*QLLRHS
Trigger: TGAGTGCCTCAGAAGCTGCCACCTTGTTTGGGTACC...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCTAACTACAATCCACTaGATTCCCAGGGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SICTVLTEDTQAFLRLQALTTIH*IPRAKD
Trigger: ATCCTTTGCCCTGGGAATCCAGTGGATTGTAGTTAG...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp TCTGCAATAGAAAACCACAGCGTCAGCACCCACAGAAGTGGGGTTGCATGCCAACTAACTACAATCCACTaGATTCCCAGGGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SAIENHSVSTHRSGVACQLTTIH*IPRAKD
Trigger: ATCCTTTGCCCTGGGAATCCAGTGGATTGTAGTTAG...TTGGCATGCAACCCCACTTCTGTGGGTGCTGACGCTGTGGTTTTCTATTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR TCA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTATGCACAGTTTTAACTaGGGACACACAAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVMHSFN*GHTSLP
Trigger: AGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCAT...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR GCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGCTGTCCTTCAACTGGTaGATTTCCGCCGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTLSFNW*ISAALM
Trigger: CATGAGAGCGGCGGAAATGCACCAGTTGAAGGACAG...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCCGCTGTGTAGAAGATaGCAATGTAGACGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: YISICTVLTEDTQAFLRLPLCRR*QCRRAS
Trigger: GCTCGCCCGTCTACATTGCCATCTTCTACACAGCGG...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CCA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGTCTCGGTACACCTTCTaGCCGTCCACATTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: YISICTVLTEDTQAFLRLSRYTF*PSTFVS
Trigger: GGAGACGAATGTGGACGGCCAGAAGGTGTACCGAGA...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000370507.5
CDS-3UTR TCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATACCAGAGGAAAGATTCTaGGGGATACAGCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIPEERF*GIQLQS
Trigger: AGACTGTAGCTGTATCCCTCAGAATCTTTCCTCTGG...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCACTTTCTCTGACAAGTTaGAGTGCATTTCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSLSLTS*SAFPCS
Trigger: ACTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAG...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCAAATTACAACGAATATaGAAACCAGAAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RVIASPNGTVLSSGNAECKLQRI*KPEGGA
Trigger: AGCCCCTCCTTCTGGTTTTCATATTCGTTGTAATTT...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR TCA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCAATGCACAGTTTTAACTaGGGACACACAAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSMHSFN*GHTSLP
Trigger: AGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCAT...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAATAAGAAGCAGGCTATaGCAAAGAAGAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIIRSRL*QRRGRP
Trigger: TGGGCGTCCTCTTCTTTGCCATAGCCTGCTTCTTAT...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CCA 90 bp TTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAAACACGCTAACTACAATCCACTaGATTCCCAGGGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: LSSRTPHTIGYKTHSINTLTTIH*IPRAKD
Trigger: ATCCTTTGCCCTGGGAATCCAGTGGATTGTAGTTAG...CGTGTTTATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS GCA 90 bp TGCAGGCACGGCGGTGCGAAGGCCCACCAGCCGCACGCCACGCTCTaGCCGGCCGAGACGTACCGCACCTCATGGGTCCCCCGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: CRHGGAKAHQPHATL*PAETYRTSWVPRAP
Trigger: TGGCGCCCGGGGGACCCATGAGGTGCGGTACGTCTCGGCCGGGCAGAGCGTGGCGTGCGGCTGGTGGGCCTTCGCACCGCCGTGCCTGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS GCA 90 bp CCCGGGCGCCATGCTTCTCGGCCCAGAGCTGGCAGAGGGGCTGCTTaGTGGTGTCCAGGGGGCTATGGGCAGCGGAGCGGAGGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: PGRHASRPRAGRGAA*WCPGGYGQRSGGSR
Trigger: CCGGCTCCCTCCGCTCCGCTGCCCATAGCCCCCTGGACACCAGCAAGCAGCCCCTCTGCCAGCTCTGGGCCGAGAAGCATGGCGCCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS GCA 90 bp TGCCCGGCCGAGACGTACCGCACCTCATGGGTCCCCCGGGCGCCATaGTTCTCGGCCCAGAGCTGGCAGAGGGGCTGCTTGCTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: CPAETYRTSWVPRAP*FSAQSWQRGCLLVS
Trigger: GGACACCAGCAAGCAGCCCCTCTGCCAGCTCTGGGCCGAGAAGCATGGCGCCCGGGGGACCCATGAGGTGCGGTACGTCTCGGCCGGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS GCA 90 bp GAACAGGATGCCCTTGGGCGTGTTGAGGACCTGCAGGCACGGCGGTaGGAAGGCCCACCAGCCGCACGCCACGCTCTGCCCGGCCGAGAC +
Preference number: 5 (lower is better)
Translates to: EQDALGRVEDLQARR*EGPPAARHALPGRD
Trigger: GTCTCGGCCGGGCAGAGCGTGGCGTGCGGCTGGTGGGCCTTCGCACCGCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCATCCTGTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCCCAGCCAGCGCGGCTaGTGCCCTGAGCCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVPSQRG*CPEPPK
Trigger: CTTCGGGGGCTCAGGGCACAAGCCGCGCTGGCTGGG...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGCACACCGCGCCGGGGTaGGCAGGGCACGTCCTGACA +
Preference number: 5 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRHTAPG*AGHVLT
Trigger: TGTCAGGACGTGCCCTGCCAACCCCGGCGCGGTGTG...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 90 bp CTTGTCCCCCAGCTGATGCAGGGGCATCTCCGCGCCTCCGCCTGGTaGCCTCGAGGCTTCAGCCACGCAGTGGGAGTGGCCTCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: LVPQLMQGHLRASAW*PRGFSHAVGVASAG
Trigger: TCCCGCTGAGGCCACTCCCACTGCGTGGCTGAAGCCTCGAGGTCACCAGGCGGAGGCGCGGAGATGCCCCTGCATCAGCTGGGGGACAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGATGCCCTTGGGCGTGTaGAGGACCTGCAGGCACGGC +
Preference number: 5 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRMPLGV*RTCRHG
Trigger: GCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCAT...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 90 bp GGAATGCGGCCGCACACAGGAAGAACAGGATGCCCTTGGGCGTGTTaGGGACCTGCAGGCACGGCGGTGCGAAGGCCCACCAGCCGCACG +
Preference number: 5 (lower is better)
Translates to: GMRPHTGRTGCPWAC*GPAGTAVRRPTSRT
Trigger: CGTGCGGCTGGTGGGCCTTCGCACCGCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCATCCTGTTCTTCCTGTGTGCGGCCGCATTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 90 bp GGGAGCCTGGCAGCTGCCGAGGGTAACCAAGGATGGGAACGGCGGTaGAGAAAGCAGCGGCCCCAGAGCCCAGGAAGCCGACCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GSLAAAEGNQGWERR*RKQRPQSPGSRPTR
Trigger: CCTGGTGGGTCGGCTTCCTGGGCTCTGGGGCCGCTGCTTTCTTCACCGCCGTTCCCATCCTTGGTTACCCTCGGCAGCTGCCAGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS GCA 90 bp GGCCGTCCGAGCCGCACACAGGGCTGTAGTGTTCTGGCTGGCAGCTaGAGGCAGCGTTGCAGGGAGCCGTTAGGTTCAGGTGGCCTTCGG +
Preference number: 5 (lower is better)
Translates to: GRPSRTQGCSVLAGS*RQRCREPLGSGGLR
Trigger: CCGAAGGCCACCTGAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCTGCCAGCCAGAACACTACAGCCCTGTGTGCGGCTCGGACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000466961.5
ENST00000470412.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACCACACCGCGCCGGGGTaGGCAGGGCACGTCCTGACA +
Preference number: 5 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHHTAPG*AGHVLT
Trigger: TGTCAGGACGTGCCCTGCCAACCCCGGCGCGGTGTG...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACTTCCCAAAGTCCGGGTaGCTCGCCTCCCCACGGCTG +
Preference number: 5 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHFPKSG*LASPRL
Trigger: CAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGAA...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGCACAGCAGACAGGCCTaGTCGATCACCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRHSRQA*SITQPK
Trigger: CTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTG...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS TCA 90 bp TGTAGAGGGGTGTGGCACCCACGCCATGCAGGAACTGGCCCAGCATaGAGACCAGCTGGTAGCGGGACAGGCCCGAGGTGCTGTCCGCAC +
Preference number: 5 (lower is better)
Translates to: CRGVWHPRHAGTGPA*RPAGSGTGPRCCPH
Trigger: GTGCGGACAGCACCTCGGGCCTGTCCCGCTACCAGCTGGTCTTCATGCTGGGCCAGTTCCTGCATGGCGTGGGTGCCACACCCCTCTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS GCA 90 bp CGCACACAGGGCTGTAGTGTTCTGGCTGGCAGCTGCAGGCAGCGTTaGAGGGAGCCGTTAGGTTCAGGTGGCCTTCGGGCAGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: RTQGCSVLAGSCRQR*REPLGSGGLRAGGS
Trigger: GGAGCCTCCTGCCCGAAGGCCACCTGAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCTGCCAGCCAGAACACTACAGCCCTGTGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000470412.5
ENST00000497209.5
CDS GCA 90 bp CGCACACAGGGCTGTAGTGTTCTGGCTGGCAGCTGCAGGCAGCGTTaGAGGGAGCCGTTAGGTTCAGGTGGCCTTCGGGCAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RTQGCSVLAGSCRQR*REPLGSGGLRAGGC
Trigger: GCAGCCTCCTGCCCGAAGGCCACCTGAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCTGCCAGCCAGAACACTACAGCCCTGTGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466961.5
CDS-3UTR CAA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGCCCAGCCAGCGCGGCTaGTGCCCTGAGCCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSPSQRG*CPEPPK
Trigger: CTTCGGGGGCTCAGGGCACAAGCCGCGCTGGCTGGG...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACATTCCCAAAGTCCGGGTaGCTCGCCTCCCCACGGCTG +
Preference number: 5 (lower is better)
Translates to: PPPSQWDSQPLRSLSSRTFPKSG*LASPRL
Trigger: CAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGAA...TGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCCCCCGGAGCCTGAGCTaGTTCACAAAGAAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLPRSLS*FTKKPP
Trigger: GGGCGGCTTCTTTGTGAACAAGCTCAGGCTCCGGGG...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp TGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCCAGCTGCAGGCAGCGTaGCAGGGAGCCGTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: CRPTALPVGFTAPAEFVLQLQAA*QGAVRF
Trigger: GAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCTG...GAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCAGCCCCTGCGGAGTTaGTCCTCACGCACACCACAC +
Preference number: 5 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTQPLRS*SSRTPH
Trigger: GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTG...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS TCA 90 bp TCTCCGTGGCTGCAGGGCACCCTGCGTGGCACAGTGAGAAGTACATaGGGCCGTCCGAGCCGCACACAGGGCTGTAGTGTTCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SPWLQGTLRGTVRST*GRPSRTQGCSVLAG
Trigger: GCCAGCCAGAACACTACAGCCCTGTGTGCGGCTCGGACGGCCTCATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGCAGCCACGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000466961.5
ENST00000470412.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCACACCGCGCCGGGGTaGGCAGGGCACGTCCTGACA +
Preference number: 5 (lower is better)
Translates to: HHPTALFCHQEMLSARRGHTAPG*AGHVLT
Trigger: TGTCAGGACGTGCCCTGCCAACCCCGGCGCGGTGTG...GCCACGGCGGGCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGGACTCCAAGAACTaGGGGCTGAACGTGGACATG +
Preference number: 5 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRWDSKN*GLNVDM
Trigger: CATGTCCACGTTCAGCCCCAAGTTCTTGGAGTCCCA...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGTGGCAGCTTACCGTAGAGTaGCCGTTAGTGCAGGAATGC +
Preference number: 5 (lower is better)
Translates to: LSSGNAECPPWPGGRGRWQLTVE*PLVQEC
Trigger: GCATTCCTGCACTAACGGCAACTCTACGGTAAGCTG...CCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS TCA 90 bp GTCCACATTCGTCTCCGTGGCTGCAGGGCACCCTGCGTGGCACAGTaGGAAGTACATGAGGCCGTCCGAGCCGCACACAGGGCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: VHIRLRGCRAPCVAQ*EVHEAVRAAHRAVV
Trigger: CACTACAGCCCTGTGTGCGGCTCGGACGGCCTCATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGCAGCCACGGAGACGAATGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000466961.5
ENST00000470412.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATGGCAGAGGGGCTGCTaGCTGGTGTCCAGGGGGCTA +
Preference number: 5 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRWQRGC*LVSRGL
Trigger: TAGCCCCCTGGACACCAGCAAGCAGCCCCTCTGCCA...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACCAGAACAGGCAGAACTaGATGACCGCGGAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHQNRQN*MTAEPR
Trigger: CCGGGGCTCCGCGGTCATCAAGTTCTGCCTGTTCTG...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GTTCTGTCATCAGGAAATGCTGAGTGCCCGCCGTGGCCGGGTGGGCGCGGGCGGGACTCCGACAGGGGCTaGTATAAGAAGCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: VLSSGNAECPPWPGGRGRDSDRG*YKKQAM
Trigger: CATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTC...CCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTTCCTGATGACAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGTGGGACTCCAAGAACTaGGGGCTGAACGTGGACATG +
Preference number: 5 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTWDSKN*GLNVDM
Trigger: CATGTCCACGTTCAGCCCCAAGTTCTTGGAGTCCCA...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGACCCCGGAGCCTGAGCTaGTTCACAAAGAAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: PSGIHSPCGVCPHAHHTRPRSLS*FTKKPP
Trigger: GGGCGGCTTCTTTGTGAACAAGCTCAGGCTCCGGGG...TCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GGCTGCAGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCGACTCCGACAGGGGCTaGTATAAGAAGCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: GCRPTALPVGFTAPAEFVDSDRG*YKKQAM
Trigger: CATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTC...GACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACCCCACAGAAGTGGGGTaGCATGCCAAGTCACCCCCT +
Preference number: 5 (lower is better)
Translates to: PSQWDSQPLRSLSSRTPHPTEVG*HAKSPP
Trigger: AGGGGGTGACTTGGCATGCAACCCCACTTCTGTGGG...GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CAA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATTGGCAGAGGGGCTGCTaGCTGGTGTCCAGGGGGCTA +
Preference number: 5 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYWQRGC*LVSRGL
Trigger: TAGCCCCCTGGACACCAGCAAGCAGCCCCTCTGCCA...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCCCAGCCAGCGCGGCTaGTGCCCTGAGCCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIPSQRG*CPEPPK
Trigger: CTTCGGGGGCTCAGGGCACAAGCCGCGCTGGCTGGG...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTACCCCGGAGCCTGAGCTaGTTCACAAAGAAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVPRSLS*FTKKPP
Trigger: GGGCGGCTTCTTTGTGAACAAGCTCAGGCTCCGGGG...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACGGACACATCGTAGAGTaGCCGTTAGTGCAGGAATGC +
Preference number: 5 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHGHIVE*PLVQEC
Trigger: GCATTCCTGCACTAACGGCAACTCTACGATGTGTCC...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000370507.5
CDS-3UTR CAA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCAGCCCCTGCGGAGTTaGTCCTCACGCACACCACAC +
Preference number: 5 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDQPLRS*SSRTPH
Trigger: GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTG...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp ACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCACCGCCCTCAGCTGCAGGCAGCGTaGCAGGGAGCCGTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: TVLTEDTQAFLRLQAHRPQLQAA*QGAVRF
Trigger: GAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCTG...AGGGCGGTGGGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CACCCGACCCCAGCTTACCGTAGAGTTGCCGTTAGTGCAGGAATGCTGCTGAGGCACAGCAGACAGGCCTaGTCGATCACCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: HPTPAYRRVAVSAGMLLRHSRQA*SITQPK
Trigger: CTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTG...CCTCAGCAGCATTCCTGCACTAACGGCAACTCTACGGTAAGCTGGGGTCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CAA 90 bp AGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGAGGACGCCCAGCACCTaGTACAGGAGCCCCATGATG +
Preference number: 5 (lower is better)
Translates to: SGIHSPCGVCPHAHHTRSRTPST*YRSPMM
Trigger: CATCATGGGGCTCCTGTACAAGGTGCTGGGCGTCCT...CGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp GGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTAAGGACGCCCAGCACCTaGTACAGGAGCCCCATGATG +
Preference number: 5 (lower is better)
Translates to: GFTAPAEFVLTHTTHDRVRTPST*YRSPMM
Trigger: CATCATGGGGCTCCTGTACAAGGTGCTGGGCGTCCT...TACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp CCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATAAGAACAGGATGCCCTaGGGCGTGTTGAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: PVGFTAPAEFVLTHTTHDKNRMP*GVLRTC
Trigger: GCAGGTCCTCAACACGCCCAAGGGCATCCTGTTCTT...ATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACGAGGTGATGACTGTGTaGATGAAGCCATTCACAGTC +
Preference number: 5 (lower is better)
Translates to: PTALPVGFTAPAEFVLTHEVMTV*MKPFTV
Trigger: GACTGTGAATGGCTTCATCAACACAGTCATCACCTC...GTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp AGGCCCACCGCCCTCCCAGTGGGATTCACAGCCCCTGCGGAGTTTGTCCTCACGGCTTTCTCTGACAAGTaGAAGTGCATTTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RPTALPVGFTAPAEFVLTAFSDK*KCISLQ
Trigger: CTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAGC...CGTGAGGACAAACTCCGCAGGGGCTGTGAATCCCACTGGGAGGGCGGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GGTCCTGCCACAGCAGACAGGCCTTGTCGATCACCCAGCCGAAGGCGATGGGCCGCTTTCTCTGACAAGTaGAAGTGCATTTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GPATADRPCRSPSRRRWAAFSDK*KCISLQ
Trigger: CTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAGC...GGCCCATCGCCTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTGGCAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CAA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATCACAGCAGACAGGCCTaGTCGATCACCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYHSRQA*SITQPK
Trigger: CTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTG...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAGGACGCCCAGCACCTaGTACAGGAGCCCCATGATG +
Preference number: 5 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYRTPST*YRSPMM
Trigger: CATCATGGGGCTCCTGTACAAGGTGCTGGGCGTCCT...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTTTCCCAAAGTCCGGGTaGCTCGCCTCCCCACGGCTG +
Preference number: 5 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIFPKSG*LASPRL
Trigger: CAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGAA...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp GGCTGGGCAGACAAGTTTCCAGGCCATCTGAAGACTCCGACAGGGGCTTGTATAAAGAACAGGATGCCCTaGGGCGTGTTGAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: GWADKFPGHLKTPTGACIKNRMP*GVLRTC
Trigger: GCAGGTCCTCAACACGCCCAAGGGCATCCTGTTCTT...TATACAAGCCCCTGTCGGAGTCTTCAGATGGCCTGGAAACTTGTCTGCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CAA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATTGGGACTCCAAGAACTaGGGGCTGAACGTGGACATG +
Preference number: 5 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYWDSKN*GLNVDM
Trigger: CATGTCCACGTTCAGCCCCAAGTTCTTGGAGTCCCA...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCCAGAACAGGCAGAACTaGATGACCGCGGAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: SICTVLTEDTQAFLRLQAQNRQN*MTAEPR
Trigger: CCGGGGCTCCGCGGTCATCAAGTTCTGCCTGTTCTG...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp TCTGCAATAGAAAACCACAGCGTCAGCACCCACAGAAGTGGGGTTGCATGCCAACAGCTGCAGGCAGCGTaGCAGGGAGCCGTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: SAIENHSVSTHRSGVACQQLQAA*QGAVRF
Trigger: GAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCTG...TTGGCATGCAACCCCACTTCTGTGGGTGCTGACGCTGTGGTTTTCTATTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS GCA 90 bp GAGAATCCACCCCCTCCACTTCCGTTGTTTCGTCCACCTCTTTCGTaGCCTGGGCATCGGAAGCAAATGCATTCTCTCCCAGGAGAACAC +
Preference number: 5 (lower is better)
Translates to: ENPPPPLPLFRPPLS*PGHRKQMHSLPGEH
Trigger: GTGTTCTCCTGGGAGAGAATGCATTTGCTTCCGATGCCCAGGGCACGAAAGAGGTGGACGAAACAACGGAAGTGGAGGGGGTGGATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS-3UTR CAA 90 bp AGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATGGCAGAGGGGCTGCTaGCTGGTGTCCAGGGGGCTA +
Preference number: 5 (lower is better)
Translates to: RSNRSSRVIASPNGTVLSWQRGC*LVSRGL
Trigger: TAGCCCCCTGGACACCAGCAAGCAGCCCCTCTGCCA...TGACAGAACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp TCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGCAGGCCAGGACGCCCAGCACCTaGTACAGGAGCCCCATGATG +
Preference number: 5 (lower is better)
Translates to: SICTVLTEDTQAFLRLQARTPST*YRSPMM
Trigger: CATCATGGGGCTCCTGTACAAGGTGCTGGGCGTCCT...GGCCTGCAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp GATTCACAGCCCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATGACTCCGACAGGGGCTaGTATAAGAAGCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: DSQPLRSLSSRTPHTIGYDSDRG*YKKQAM
Trigger: CATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTC...ATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTGTGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS-3UTR CAA 90 bp CTGAAGACTCCGACAGGGGCTTGTATAAGAAGCAGGCTATGGCAAAGAAGAGGACAGCCCCTGCGGAGTTaGTCCTCACGCACACCACAC +
Preference number: 5 (lower is better)
Translates to: LKTPTGACIRSRLWQRRGQPLRS*SSRTPH
Trigger: GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTG...TCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS GCA 90 bp CGTTGTTTCGTCCACCTCTTTCGTGCCCTGGGCATCGGAAGCAAATaGATTCTCTCCCAGGAGAACACAGGCAGTCCACCCTCTAGAGAA +
Preference number: 5 (lower is better)
Translates to: RCFVHLFRALGIGSK*ILSQENTGSPPSRE
Trigger: TTCTCTAGAGGGTGGACTGCCTGTGTTCTCCTGGGAGAGAATGCATTTGCTTCCGATGCCCAGGGCACGAAAGAGGTGGACGAAACAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS-3UTR CAA 90 bp GGTTGCAGGTCAAATAGAAGTTCCCGTGTGATTGCATCACCCAACGGCACTGTTCACAGCAGACAGGCCTaGTCGATCACCCAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: GCRSNRSSRVIASPNGTVHSRQA*SITQPK
Trigger: CTTCGGCTGGGTGATCGACAAGGCCTGTCTGCTGTG...AACAGTGCCGTTGGGTGATGCAATCACACGGGAACTTCTATTTGACCTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS TCA 90 bp GTGCATTTCCCTGCAGTGGCATGGCCAAAACCAGAGGAAAGATTCTaGGGGATACAGCTACAGTCTCGGTACACCTTCTGGCCGTCCACA +
Preference number: 5 (lower is better)
Translates to: VHFPAVAWPKPEERF*GIQLQSRYTFWPST
Trigger: TGTGGACGGCCAGAAGGTGTACCGAGACTGTAGCTGTATCCCTCAGAATCTTTCCTCTGGTTTTGGCCATGCCACTGCAGGGAAATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000470412.5
CDS GCA 90 bp TTCTCTCCCAGGAGAACACAGGCAGTCCACCCTCTAGAGAAAGCCTaGTCTGGAAGACGTTGTCAGAAAGCCGAGACTCCACATCCATCA +
Preference number: 5 (lower is better)
Translates to: FSPRRTQAVHPLEKA*SGRRCQKAETPHPS
Trigger: TGATGGATGTGGAGTCTCGGCTTTCTGACAACGTCTTCCAGAGCAGGCTTTCTCTAGAGGGTGGACTGCCTGTGTTCTCCTGGGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS-3UTR CAA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATACAGCCCCTGCGGAGTTaGTCCTCACGCACACCACAC +
Preference number: 5 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIQPLRS*SSRTPH
Trigger: GTGTGGTGTGCGTGAGGACAAACTCCGCAGGGGCTG...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000497209.5
CDS TCA 90 bp GTGCATTTCCCTGCAGTGGCATGGCCAAAACCAGAGGAAAGATTCTaGGGGATACAGCTACAGTCTCGGTACACCTGGGAAGCCCAACAA +
Preference number: 5 (lower is better)
Translates to: VHFPAVAWPKPEERF*GIQLQSRYTWEAQQ
Trigger: TTGTTGGGCTTCCCAGGTGTACCGAGACTGTAGCTGTATCCCTCAGAATCTTTCCTCTGGTTTTGGCCATGCCACTGCAGGGAAATGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS-3UTR CAA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGATGCCCTTGGGCGTGTaGAGGACCTGCAGGCACGGC +
Preference number: 5 (lower is better)
Translates to: YISICTVLTEDTQAFLRLMPLGV*RTCRHG
Trigger: GCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCAT...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCGGACACATCGTAGAGTaGCCGTTAGTGCAGGAATGC +
Preference number: 5 (lower is better)
Translates to: RVIASPNGTVLSSGNAECGHIVE*PLVQEC
Trigger: GCATTCCTGCACTAACGGCAACTCTACGATGTGTCC...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000370507.5
CDS-3UTR CAA 90 bp AAGACTCCGACAGGGGCTTGTATAAGAAGCAGGCTATGGCAAAGAAGAGGACGCGACTCCGACAGGGGCTaGTATAAGAAGCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: KTPTGACIRSRLWQRRGRDSDRG*YKKQAM
Trigger: CATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTC...GCGTCCTCTTCTTTGCCATAGCCTGCTTCTTATACAAGCCCCTGTCGGAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS GCA 90 bp AGAATCCGAGTCCTGGGCAGGACAGATCAAGATCTCACCAGACTGTaGAGAACGGCGCGTGCTTTAAAGGTTATGAACTGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: RIRVLGRTDQDLTRL*RTARALKVMNCLLL
Trigger: CAGAAGCAAACAGTTCATAACCTTTAAAGCACGCGCCGTTCTGCACAGTCTGGTGAGATCTTGATCTGTCCTGCCCAGGACTCGGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470412.5
ENST00000497919.5
CDS-3UTR CAA 90 bp CGTGTGATTGCATCACCCAACGGCACTGTTCTGTCATCAGGAAATGCTGAGTGCGAGGTGATGACTGTGTaGATGAAGCCATTCACAGTC +
Preference number: 5 (lower is better)
Translates to: RVIASPNGTVLSSGNAECEVMTV*MKPFTV
Trigger: GACTGTGAATGGCTTCATCAACACAGTCATCACCTC...GCACTCAGCATTTCCTGATGACAGAACAGTGCCGTTGGGTGATGCAATCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CCCTGCGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTGAGGTGATGACTGTGTaGATGAAGCCATTCACAGTC +
Preference number: 5 (lower is better)
Translates to: PCGVCPHAHHTRSGIKHIEVMTV*MKPFTV
Trigger: GACTGTGAATGGCTTCATCAACACAGTCATCACCTC...AATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 90 bp AGACGTTGTCAGAAAGCCGAGACTCCACATCCATCACGGCCTTGGTaGAAATCCAATTCAAGGAGATCTATGTGTAAGGCTCAGATGGGG +
Preference number: 5 (lower is better)
Translates to: RRCQKAETPHPSRPW*KSNSRRSMCKAQMG
Trigger: CCCCATCTGAGCCTTACACATAGATCTCCTTGAATTGGATTTTCACCAAGGCCGTGATGGATGTGGAGTCTCGGCTTTCTGACAACGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS-3UTR CAA 90 bp TATATTTCGATATGCACAGTTTTAACTGAGGACACACAAGCCTTCCTCAGGCTGAAGAACAGGATGCCCTaGGGCGTGTTGAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: YISICTVLTEDTQAFLRLKNRMP*GVLRTC
Trigger: GCAGGTCCTCAACACGCCCAAGGGCATCCTGTTCTT...CAGCCTGAGGAAGGCTTGTGTGTCCTCAGTTAAAACTGTGCATATCGAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS-3UTR CAA 90 bp CGGAGTTTGTCCTCACGCACACCACACACGATCGGGTATAAAACACATTCTATAGCTTTCTCTGACAAGTaGAAGTGCATTTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RSLSSRTPHTIGYKTHSIAFSDK*KCISLQ
Trigger: CTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAGC...TATAGAATGTGTTTTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS GCA 90 bp GGGCAGGACAGATCAAGATCTCACCAGACTGTGCAGAACGGCGCGTaGTTTAAAGGTTATGAACTGTTTGCTTCTGGAATTTCCTATTTA +
Preference number: 5 (lower is better)
Translates to: GQDRSRSHQTVQNGA*FKGYELFASGISYL
Trigger: TAAATAGGAAATTCCAGAAGCAAACAGTTCATAACCTTTAAAGCACGCGCCGTTCTGCACAGTCTGGTGAGATCTTGATCTGTCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470412.5
ENST00000497919.5
CDS GCA 72 bp GGCGGTGCGAAGGCCCACCAGCCGCACGCCACGCTCTaGCCGGCCGAGACGTACCGCACCTCATGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: GGAKAHQPHATL*PAETYRTSWVP
Trigger: GGGGACCCATGAGGTGCGGTACGTCTCGGCCGGGCAGAGCGTGGCGTGCGGCTGGTGGGCCTTCGCACCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS GCA 72 bp GCCCTTGGGCGTGTTGAGGACCTGCAGGCACGGCGGTaGGAAGGCCCACCAGCCGCACGCCACGCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: ALGRVEDLQARR*EGPPAARHALP
Trigger: GGGCAGAGCGTGGCGTGCGGCTGGTGGGCCTTCGCACCGCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CCA 72 bp GCCACGCTCTGCCCGGCCGAGACGTACCGCACCTCATaGGTCCCCCGGGCGCCATGCTTCTCGGCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: ATLCPAETYRTS*VPRAPCFSAQS
Trigger: GCTCTGGGCCGAGAAGCATGGCGCCCGGGGGACCCATGAGGTGCGGTACGTCTCGGCCGGGCAGAGCGTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CCA 72 bp GCCCAGGAAGCCGACCCACCAGGCGCCGACCCACAGTaGGCTCTCGGTGGTCAGCTCCGTCCGTCGGCCCAT +
Preference number: 6 (lower is better)
Translates to: AQEADPPGADPQ*ALGGQLRPSAH
Trigger: ATGGGCCGACGGACGGAGCTGACCACCGAGAGCCCACTGTGGGTCGGCGCCTGGTGGGTCGGCTTCCTGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CAA 72 bp AGGCCCGAGGTGCTGTCCGCACACACCGCGCCGGGGTaGGCAGGGCACGTCCTGACACCCGCGTCCAACTCC +
Preference number: 6 (lower is better)
Translates to: RPEVLSAHTAPG*AGHVLTPASNS
Trigger: GGAGTTGGACGCGGGTGTCAGGACGTGCCCTGCCAACCCCGGCGCGGTGTGTGCGGACAGCACCTCGGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 72 bp CCGCACACACCGCGCCGGGGTTGGCAGGGCACGTCCTaGCACCCGCGTCCAACTCCACCTCATAGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: PHTPRRGWQGTS*HPRPTPPHSGQ
Trigger: CTGGCCGCTATGAGGTGGAGTTGGACGCGGGTGTCAGGACGTGCCCTGCCAACCCCGGCGCGGTGTGTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 72 bp CAGCTGATGCAGGGGCATCTCCGCGCCTCCGCCTGGTaGCCTCGAGGCTTCAGCCACGCAGTGGGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: QLMQGHLRASAW*PRGFSHAVGVA
Trigger: GGCCACTCCCACTGCGTGGCTGAAGCCTCGAGGTCACCAGGCGGAGGCGCGGAGATGCCCCTGCATCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CAA 72 bp CCATGCTTCTCGGCCCAGAGCTGGCAGAGGGGCTGCTaGCTGGTGTCCAGGGGGCTATGGGCAGCGGAGCGG +
Preference number: 6 (lower is better)
Translates to: PCFSAQSWQRGC*LVSRGLWAAER
Trigger: CCGCTCCGCTGCCCATAGCCCCCTGGACACCAGCAAGCAGCCCCTCTGCCAGCTCTGGGCCGAGAAGCATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CCA 72 bp CACGCAGTGGGAGTGGCCTCAGCGGGAGTGGCCAAGTaGTATCCGAGGGGCTGGTGTGTCCGTCCCCGTCTC +
Preference number: 6 (lower is better)
Translates to: HAVGVASAGVAK*YPRGWCVRPRL
Trigger: GAGACGGGGACGGACACACCAGCCCCTCGGATACCACTTGGCCACTCCCGCTGAGGCCACTCCCACTGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217159.6
ENST00000497209.5
CDS TCA 72 bp GTGTGGCACCCACGCCATGCAGGAACTGGCCCAGCATaGAGACCAGCTGGTAGCGGGACAGGCCCGAGGTGC +
Preference number: 6 (lower is better)
Translates to: VWHPRHAGTGPA*RPAGSGTGPRC
Trigger: GCACCTCGGGCCTGTCCCGCTACCAGCTGGTCTTCATGCTGGGCCAGTTCCTGCATGGCGTGGGTGCCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 72 bp CGTCTCCGTGGCTGCAGGGCACCCTGCGTGGCACAGTaGGAAGTACATGAGGCCGTCCGAGCCGCACACAGG +
Preference number: 6 (lower is better)
Translates to: RLRGCRAPCVAQ*EVHEAVRAAHR
Trigger: CCTGTGTGCGGCTCGGACGGCCTCATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGCAGCCACGGAGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000466961.5
ENST00000470412.5
ENST00000497209.5
CDS CCA 72 bp CCTGGTGACCTCGAGGCTTCAGCCACGCAGTGGGAGTaGCCTCAGCGGGAGTGGCCAAGTGGTATCCGAGGG +
Preference number: 6 (lower is better)
Translates to: PGDLEASATQWE*PQREWPSGIRG
Trigger: CCCTCGGATACCACTTGGCCACTCCCGCTGAGGCCACTCCCACTGCGTGGCTGAAGCCTCGAGGTCACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CAA 90 bp ATCCCCTGCAGGAATGCGGCCGCACACAGGAAGAACAGGATGCCCTaGGGCGTGTTGAGGACCTGCAGGCACGGCGGTGCGAAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: IPCRNAAAHRKNRMP*GVLRTCRHGGAKAH
Trigger: GTGGGCCTTCGCACCGCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCATCCTGTTCTTCCTGTGTGCGGCCGCATTCCTGCAGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 72 bp GGCAGAGGCAGGCGGCAATGTCGTAGGAGCTGGCGATaGGCCCGCTCTGGTAGCTGTGCAGGTCATAGCGGC +
Preference number: 6 (lower is better)
Translates to: GRGRRQCRRSWR*ARSGSCAGHSG
Trigger: GCCGCTATGACCTGCACAGCTACCAGAGCGGGCTCATCGCCAGCTCCTACGACATTGCCGCCTGCCTCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CAA 72 bp AGGAATGCGGCCGCACACAGGAAGAACAGGATGCCCTaGGGCGTGTTGAGGACCTGCAGGCACGGCGGTGCG +
Preference number: 6 (lower is better)
Translates to: RNAAAHRKNRMP*GVLRTCRHGGA
Trigger: CGCACCGCCGTGCCTGCAGGTCCTCAACACGCCCAAGGGCATCCTGTTCTTCCTGTGTGCGGCCGCATTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS TCA 72 bp TGCTGTCCTTCAACTGGTGCATTTCCGCCGCTCTCATaGCCGCGTAGCGCTGGGAGCCTGGCAGCTGCCGAG +
Preference number: 6 (lower is better)
Translates to: CCPSTGAFPPLS*PRSAGSLAAAE
Trigger: CTCGGCAGCTGCCAGGCTCCCAGCGCTACGCGGTCATGAGAGCGGCGGAAATGCACCAGTTGAAGGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CCA 72 bp AAAGAAGCCGCCCAGGAAGGTGCCGCCACCACCCGCTaGCACCACCAGGTACCCAAACAAGGTGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: KEAAQEGAATTR*HHQVPKQGGSF
Trigger: GAAGCTGCCACCTTGTTTGGGTACCTGGTGGTGCCAGCGGGTGGTGGCGGCACCTTCCTGGGCGGCTTCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CCA 72 bp TCCACATTCGTCTCCGTGGCTGCAGGGCACCCTGCGTaGCACAGTGAGAAGTACATGAGGCCGTCCGAGCCG +
Preference number: 6 (lower is better)
Translates to: STFVSVAAGHPA*HSEKYMRPSEP
Trigger: CGGCTCGGACGGCCTCATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGCAGCCACGGAGACGAATGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000451793.1
ENST00000466961.5
ENST00000470412.5
ENST00000497209.5
CDS TCA 72 bp CTGCAGGGCACCCTGCGTGGCACAGTGAGAAGTACATaGGGCCGTCCGAGCCGCACACAGGGCTGTAGTGTT +
Preference number: 6 (lower is better)
Translates to: LQGTLRGTVRST*GRPSRTQGCSV
Trigger: AACACTACAGCCCTGTGTGCGGCTCGGACGGCCTCATGTACTTCTCACTGTGCCACGCAGGGTGCCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000466961.5
ENST00000470412.5
ENST00000497209.5
CDS GCA 72 bp AGCCGCACACAGGGCTGTAGTGTTCTGGCTGGCAGCTaGAGGCAGCGTTGCAGGGAGCCGTTAGGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: SRTQGCSVLAGS*RQRCREPLGSG
Trigger: ACCTGAACCTAACGGCTCCCTGCAACGCTGCCTGCAGCTGCCAGCCAGAACACTACAGCCCTGTGTGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000466961.5
ENST00000470412.5
ENST00000497209.5
CDS CCA 72 bp CACCTCCAATCAGGTAGCCGGCAGCTGGGCCCAGGATaGCCGCTGTGTAGAAGATGGCAATGTAGACGGGCG +
Preference number: 6 (lower is better)
Translates to: HLQSGSRQLGPG*PLCRRWQCRRA
Trigger: CGCCCGTCTACATTGCCATCTTCTACACAGCGGCCATCCTGGGCCCAGCTGCCGGCTACCTGATTGGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS GCA 72 bp TTTTCCCAAAGTCCGGGTTGCTCGCCTCCCCACGGCTaGTGTCCTTCAACTGGTGCATTTCCGCCGCTCTCA +
Preference number: 6 (lower is better)
Translates to: FSQSPGCSPPHG*CPSTGAFPPLS
Trigger: TGAGAGCGGCGGAAATGCACCAGTTGAAGGACAGCAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CCA 72 bp ATTCAGCAGGGCACCTCCAATCAGGTAGCCGGCAGCTaGGCCCAGGATGGCCGCTGTGTAGAAGATGGCAAT +
Preference number: 6 (lower is better)
Translates to: IQQGTSNQVAGS*AQDGRCVEDGN
Trigger: ATTGCCATCTTCTACACAGCGGCCATCCTGGGCCCAGCTGCCGGCTACCTGATTGGAGGTGCCCTGCTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CAA 72 bp AGAGGCAGGTCTCTGATGGTTTTCCCAAAGTCCGGGTaGCTCGCCTCCCCACGGCTGCTGTCCTTCAACTGG +
Preference number: 6 (lower is better)
Translates to: RGRSLMVFPKSG*LASPRLLSFNW
Trigger: CCAGTTGAAGGACAGCAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGAAAACCATCAGAGACCTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CAA 90 bp ACGAGGATGCCCAGCAGGCTGACAACGGTGCAGAACAGGCAGAACTaGATGACCGCGGAGCCCCGGAGCCTGAGCTTGTTCACAAAGAAG +
Preference number: 6 (lower is better)
Translates to: TRMPSRLTTVQNRQN*MTAEPRSLSLFTKK
Trigger: CTTCTTTGTGAACAAGCTCAGGCTCCGGGGCTCCGCGGTCATCAAGTTCTGCCTGTTCTGCACCGTTGTCAGCCTGCTGGGCATCCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000470412.5
ENST00000497209.5
CDS CAA 90 bp CAGATGGAGAGAGGCAGGTCTCTGATGGTTTTCCCAAAGTCCGGGTaGCTCGCCTCCCCACGGCTGCTGTCCTTCAACTGGTGCATTTCC +
Preference number: 6 (lower is better)
Translates to: QMERGRSLMVFPKSG*LASPRLLSFNWCIS
Trigger: GGAAATGCACCAGTTGAAGGACAGCAGCCGTGGGGAGGCGAGCAACCCGGACTTTGGGAAAACCATCAGAGACCTGCCTCTCTCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CAA 72 bp GTTTCCCAGGTAGAGAATCCACCCCCTCCACTTCCGTaGTTTCGTCCACCTCTTTCGTGCCCTGGGCATCGG +
Preference number: 6 (lower is better)
Translates to: VSQVENPPPPLP*FRPPLSCPGHR
Trigger: CCGATGCCCAGGGCACGAAAGAGGTGGACGAAACAACGGAAGTGGAGGGGGTGGATTCTCTACCTGGGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS CAA 90 bp CCATGCTGGGTTTCCCAGGTAGAGAATCCACCCCCTCCACTTCCGTaGTTTCGTCCACCTCTTTCGTGCCCTGGGCATCGGAAGCAAATG +
Preference number: 6 (lower is better)
Translates to: PCWVSQVENPPPPLP*FRPPLSCPGHRKQM
Trigger: CATTTGCTTCCGATGCCCAGGGCACGAAAGAGGTGGACGAAACAACGGAAGTGGAGGGGGTGGATTCTCTACCTGGGAAACCCAGCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS GCA 72 bp CCCCCTCCACTTCCGTTGTTTCGTCCACCTCTTTCGTaGCCTGGGCATCGGAAGCAAATGCATTCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: PPPLPLFRPPLS*PGHRKQMHSLP
Trigger: TGGGAGAGAATGCATTTGCTTCCGATGCCCAGGGCACGAAAGAGGTGGACGAAACAACGGAAGTGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS TCA 72 bp TGGCACCACCAGGTACCCAAACAAGGTGGCAGCTTCTaGGGCACTCAGGCTGAACTGGGACTCCAAGAACTT +
Preference number: 6 (lower is better)
Translates to: WHHQVPKQGGSF*GTQAELGLQEL
Trigger: AAGTTCTTGGAGTCCCAGTTCAGCCTGAGTGCCTCAGAAGCTGCCACCTTGTTTGGGTACCTGGTGGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CCA 72 bp AACAAGGTGGCAGCTTCTGAGGCACTCAGGCTGAACTaGGACTCCAAGAACTTGGGGCTGAACGTGGACATG +
Preference number: 6 (lower is better)
Translates to: NKVAASEALRLN*DSKNLGLNVDM
Trigger: CATGTCCACGTTCAGCCCCAAGTTCTTGGAGTCCCAGTTCAGCCTGAGTGCCTCAGAAGCTGCCACCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000497209.5
CDS CAA 72 bp AGTCCACCCTCTAGAGAAAGCCTGCTCTGGAAGACGTaGTCAGAAAGCCGAGACTCCACATCCATCACGGCC +
Preference number: 6 (lower is better)
Translates to: SPPSRESLLWKT*SESRDSTSITA
Trigger: GGCCGTGATGGATGTGGAGTCTCGGCTTTCTGACAACGTCTTCCAGAGCAGGCTTTCTCTAGAGGGTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS GCA 72 bp AGGAGAACACAGGCAGTCCACCCTCTAGAGAAAGCCTaGTCTGGAAGACGTTGTCAGAAAGCCGAGACTCCA +
Preference number: 6 (lower is better)
Translates to: RRTQAVHPLEKA*SGRRCQKAETP
Trigger: TGGAGTCTCGGCTTTCTGACAACGTCTTCCAGAGCAGGCTTTCTCTAGAGGGTGGACTGCCTGTGTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS CCA 72 bp AACACAGGCAGTCCACCCTCTAGAGAAAGCCTGCTCTaGAAGACGTTGTCAGAAAGCCGAGACTCCACATCC +
Preference number: 6 (lower is better)
Translates to: NTGSPPSRESLL*KTLSESRDSTS
Trigger: GGATGTGGAGTCTCGGCTTTCTGACAACGTCTTCCAGAGCAGGCTTTCTCTAGAGGGTGGACTGCCTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS CCA 72 bp TCCACTTCCGTTGTTTCGTCCACCTCTTTCGTGCCCTaGGCATCGGAAGCAAATGCATTCTCTCCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: STSVVSSTSFVP*ASEANAFSPRR
Trigger: TCTCCTGGGAGAGAATGCATTTGCTTCCGATGCCCAGGGCACGAAAGAGGTGGACGAAACAACGGAAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS CAA 90 bp AACACAGGCAGTCCACCCTCTAGAGAAAGCCTGCTCTGGAAGACGTaGTCAGAAAGCCGAGACTCCACATCCATCACGGCCTTGGTGAAA +
Preference number: 6 (lower is better)
Translates to: NTGSPPSRESLLWKT*SESRDSTSITALVK
Trigger: TTTCACCAAGGCCGTGATGGATGTGGAGTCTCGGCTTTCTGACAACGTCTTCCAGAGCAGGCTTTCTCTAGAGGGTGGACTGCCTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS TCA 72 bp CCTGCAGTGGCATGGCCAAAACCAGAGGAAAGATTCTaGGGGATACAGCTACAGTCTCGGTACACCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PAVAWPKPEERF*GIQLQSRYTFW
Trigger: CCAGAAGGTGTACCGAGACTGTAGCTGTATCCCTCAGAATCTTTCCTCTGGTTTTGGCCATGCCACTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000470412.5
CDS TCA 72 bp ACTACAATCCACTGGATTCCCAGGGCAAAGGATCTCTaGGGGTCACGGACACATCTTCTGGCCGTCCACATT +
Preference number: 6 (lower is better)
Translates to: TTIHWIPRAKDL*GSRTHLLAVHI
Trigger: AATGTGGACGGCCAGAAGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCTGGGAATCCAGTGGATTGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451793.1
CDS TCA 72 bp CCTGCAGTGGCATGGCCAAAACCAGAGGAAAGATTCTaGGGGATACAGCTACAGTCTCGGTACACCTGGGAA +
Preference number: 6 (lower is better)
Translates to: PAVAWPKPEERF*GIQLQSRYTWE
Trigger: TTCCCAGGTGTACCGAGACTGTAGCTGTATCCCTCAGAATCTTTCCTCTGGTTTTGGCCATGCCACTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497209.5
CDS TCA 72 bp ACTACAATCCACTGGATTCCCAGGGCAAAGGATCTCTaGGGGTCACGGACACATCGTAGAGTTGCCGTTAGT +
Preference number: 6 (lower is better)
Translates to: TTIHWIPRAKDL*GSRTHRRVAVS
Trigger: ACTAACGGCAACTCTACGATGTGTCCGTGACCCTCAGAGATCCTTTGCCCTGGGAATCCAGTGGATTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000466961.5
ENST00000470412.5
ENST00000495889.5
CDS GCA 72 bp GTCCTGGGCAGGACAGATCAAGATCTCACCAGACTGTaGAGAACGGCGCGTGCTTTAAAGGTTATGAACTGT +
Preference number: 6 (lower is better)
Translates to: VLGRTDQDLTRL*RTARALKVMNC
Trigger: ACAGTTCATAACCTTTAAAGCACGCGCCGTTCTGCACAGTCTGGTGAGATCTTGATCTGTCCTGCCCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470412.5
ENST00000497919.5
CDS CCA 72 bp GCTTTCTCTGACAAGTTGAAGTGCATTTCCCTGCAGTaGCATGGCCAAAACCAGAGGAAAGATTCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: AFSDKLKCISLQ*HGQNQRKDSEG
Trigger: TCCCTCAGAATCTTTCCTCTGGTTTTGGCCATGCCACTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000470412.5
ENST00000497209.5
CDS TCA 72 bp ACAACGAATATGAAAACCAGAAGGAGGGGCTTTCTCTaGCAAGTTGAAGTGCATTTCCCTGCAGTGGCATGG +
Preference number: 6 (lower is better)
Translates to: TTNMKTRRRGFL*QVEVHFPAVAW
Trigger: CCATGCCACTGCAGGGAAATGCACTTCAACTTGTCAGAGAAAGCCCCTCCTTCTGGTTTTCATATTCGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217159.6
ENST00000370507.5
ENST00000470412.5
ENST00000497209.5
CDS TCA 72 bp CAGAAAGCCGAGACTCCACATCCATCACGGCCTTGGTaGAAATCCAATTCAAGGAGATCTATGTGTAAGGCT +
Preference number: 6 (lower is better)
Translates to: QKAETPHPSRPW*KSNSRRSMCKA
Trigger: AGCCTTACACATAGATCTCCTTGAATTGGATTTTCACCAAGGCCGTGATGGATGTGGAGTCTCGGCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1
CDS GCA 72 bp AGATCAAGATCTCACCAGACTGTGCAGAACGGCGCGTaGTTTAAAGGTTATGAACTGTTTGCTTCTGGAATT +
Preference number: 6 (lower is better)
Translates to: RSRSHQTVQNGA*FKGYELFASGI
Trigger: AATTCCAGAAGCAAACAGTTCATAACCTTTAAAGCACGCGCCGTTCTGCACAGTCTGGTGAGATCTTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470412.5
ENST00000497919.5
CDS CCA 72 bp AATCCAATTCAAGGAGATCTATGTGTAAGGCTCAGATaGGGTTTACAGCCTTCTAAATTCATTCTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: NPIQGDLCVRLR*GLQPSKFILFF
Trigger: GAAGAAGAGAATGAATTTAGAAGGCTGTAAACCCCATCTGAGCCTTACACATAGATCTCCTTGAATTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466818.1