Pregenerated sensors for SLCO1B3 (Homo sapiens)
Ensembl gene IDs: ENSG00000111700Ensembl transcript IDs: ENST00000261196.6, ENST00000381545.8, ENST00000544370.1, ENST00000545880.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATGTTGGAATTGTCAGTaGAAGACCAGGAACACCTCA | + |
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Preference number: 2 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKCWNCQ*KTRNTS Trigger: TGAGGTGTTCCTGGTCTTTCACTGACAATTCCAACA...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| 3UTR-3UTR CCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAACATAGACTTATCCATTaGTCCACTGTAAGTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKHRLIH*STVSKE Trigger: TTCTTTACTTACAGTGGACCAATGGATAAGTCTATG...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTACATAGACTTATCCATTaGTCCACTGTAAGTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: EVGRRSIEVVSQTQIQILHRLIH*STVSKE Trigger: TTCTTTACTTACAGTGGACCAATGGATAAGTCTATG...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGTGGAGAAAAGGGAACGCTTATACACTACTAGTGGGAATGTAAATAAGTTCTATACTTTCAGGCATTaGGGTCATACTTACAAACAC | + |
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Preference number: 3 (lower is better) Translates to: IVEKRERLYTTSGNVNKFYTFRH*GHTYKH Trigger: GTGTTTGTAAGTATGACCCAAATGCCTGAAAGTATA...GAACTTATTTACATTCCCACTAGTAGTGTATAAGCGTTCCCTTTTCTCCACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544370.1 |
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| CDS-3UTR CCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTAAGGCCCTCTAGGAGGTaGGAACAACGGGACAACACT | + |
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Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILRPSRR*EQRDNT Trigger: AGTGTTGTCCCGTTGTTCCCACCTCCTAGAGGGCCT...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381545.8 |
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| CDS-3UTR TCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAACTGCCAAGAACATCTTaGATCCATTGCAGCGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKLPRTS*IHCSVL Trigger: CAAGACGCTGCAATGGATTCAAGATGTTCTTGGCAG...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR TCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTACTGCCAAGAACATCTTaGATCCATTGCAGCGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILLPRTS*IHCSVL Trigger: CAAGACGCTGCAATGGATTCAAGATGTTCTTGGCAG...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR GCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAAAAAGTTAGCATGAGATaGAGACTGACCGTACTGTTG | + |
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Preference number: 4 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKKVSMR*RLTVLL Trigger: CAACAGTACGGTCAGTCTGCATCTCATGCTAACTTT...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR TCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAAGCTTTCAATTCAGGTTaGACAATCTTCACAGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKAFNSG*TIFTVN Trigger: GTTGACTGTGAAGATTGTTCAACCTGAATTGAAAGC...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR TCA 90 bp | GTGGAGAAAAGGGAACGCTTATACACTACTAGTGGGAATGTAAATAAGTTCTGTTGTTCTTATAACCATTaGCTGGAAACCCATTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: VEKRERLYTTSGNVNKFCCSYNH*LETHCK Trigger: CTTGCAATGGGTTTCCAGTCAATGGTTATAAGAACA...ACAGAACTTATTTACATTCCCACTAGTAGTGTATAAGCGTTCCCTTTTCTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544370.1 |
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| CDS-3UTR TCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTATGTTGGAATTGTCAGTaGAAGACCAGGAACACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILCWNCQ*KTRNTS Trigger: TGAGGTGTTCCTGGTCTTTCACTGACAATTCCAACA...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR TCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAACTTCAGGGCTATGCTTaGAGTCCATTTAAAACAGTA | + |
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Preference number: 4 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKLQGYA*SPFKTV Trigger: TACTGTTTTAAATGGACTTCAAGCATAGCCCTGAAG...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381545.8 |
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| CDS-3UTR GCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATCTTTCATTGTCCGATaGCTTGGTATCTTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKSFIVR*LGIFSL Trigger: CAAGGAAAAGATACCAAGGCATCGGACAATGAAAGA...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR GCA 90 bp | CAGAATTACCATTCAACCCATCAGTCCTATTATTGGGTATATACACAAAGCAATAAAGTTAGCATGAGATaGAGACTGACCGTACTGTTG | + |
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Preference number: 4 (lower is better) Translates to: QNYHSTHQSYYWVYTQSNKVSMR*RLTVLL Trigger: CAACAGTACGGTCAGTCTGCATCTCATGCTAACTTT...ATTGCTTTGTGTATATACCCAATAATAGGACTGATGGGTTGAATGGTAATTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544370.1 |
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| CDS-3UTR CCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAACATTGTCCGATGCCTTaGTATCTTTTCCTTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKHCPMP*YLFLEI Trigger: AATTTCAAGGAAAAGATACCAAGGCATCGGACAATG...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTACAATGCAATGTTAGTTaGCAGCAGCATTGTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILQCNVS*QQHCLA Trigger: TGCAAGACAATGCTGCTGCCAACTAACATTGCATTG...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR TCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTATGTTCTTATAACCATTaGCTGGAAACCCATTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILCSYNH*LETHCK Trigger: CTTGCAATGGGTTTCCAGTCAATGGTTATAAGAACA...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR GCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTATCTTTCATTGTCCGATaGCTTGGTATCTTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILSFIVR*LGIFSL Trigger: CAAGGAAAAGATACCAAGGCATCGGACAATGAAAGA...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR GCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTAGCAGCAGCATTGTCTTaGATGTCCAAATTACATGTT | + |
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Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILAAALS*MSKLHV Trigger: AACATGTAATTTGGACATGCAAGACAATGCTGCTGC...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR GCA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAAATCTTAATGAATCAATaGAATGTTAGTTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKILMNQ*NVSWQQ Trigger: CTGCTGCCAACTAACATTGCATTGATTCATTAAGAT...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR TCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTATACATGAGATGCCACTaGATTATTTCCATCATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILYMRCH*IISIIG Trigger: ACCTATGATGGAAATAATTCAGTGGCATCTCATGTA...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR TCA 90 bp | AAAAGGGAACGCTTATACACTACTAGTGGGAATGTAAATAAGTTCTGTCATTGTTACATGAGATGCCACTaGATTATTTCCATCATAGGT | + |
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Preference number: 4 (lower is better) Translates to: KRERLYTTSGNVNKFCHCYMRCH*IISIIG Trigger: ACCTATGATGGAAATAATTCAGTGGCATCTCATGTA...ACAATGACAGAACTTATTTACATTCCCACTAGTAGTGTATAAGCGTTCCCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544370.1 |
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| CDS-3UTR TCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTAATGCTTGGTTTGAAATaGTCACATAGCATATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILMLGLK*SHSICT Trigger: GGTACATATGCTATGTGATCATTTCAAACCAAGCAT...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381545.8 |
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| CDS-3UTR CCA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTACATTGTCCGATGCCTTaGTATCTTTTCCTTGAAATT | + |
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Preference number: 4 (lower is better) Translates to: EVGRRSIEVVSQTQIQILHCPMP*YLFLEI Trigger: AATTTCAAGGAAAAGATACCAAGGCATCGGACAATG...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS TCA 90 bp | CCTCTAGGAGGTGGGAACAACGGGACAACACTTCAGGGCTATGCTTaGAGTCCATTTAAAACAGTAAACTCAGCATCGCAAAGCACAACT | + |
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Preference number: 5 (lower is better) Translates to: PLGGGNNGTTLQGYA*SPFKTVNSASQSTT Trigger: AGTTGTGCTTTGCGATGCTGAGTTTACTGTTTTAAATGGACTTCAAGCATAGCCCTGAAGTGTTGTCCCGTTGTTCCCACCTCCTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAAGGCAGCAGCATTGTCTaGCATGTCCAAATTACATGT | + |
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Preference number: 5 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKGSSIV*HVQITC Trigger: ACATGTAATTTGGACATGCAAGACAATGCTGCTGCC...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS TCA 90 bp | AGTGAAATGCTGATGGGAAAACCTGTACAGCAGCAGGTGAAGTTGTaGAGCCTTACTGAGGATAATCAAAATTATCCCATGAAGAAATGT | + |
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Preference number: 5 (lower is better) Translates to: SEMLMGKPVQQQVKL*SLTEDNQNYPMKKC Trigger: ACATTTCTTCATGGGATAATTTTGATTATCCTCAGTAAGGCTTCACAACTTCACCTGCTGCTGTACAGGTTTTCCCATCAGCATTTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000545880.1 |
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| CDS-3UTR CAA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTAGCTGCCAAGAACATCTaGAATCCATTGCAGCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: EVGRRSIEVVSQTQIQILAAKNI*NPLQRL Trigger: AAGACGCTGCAATGGATTCAAGATGTTCTTGGCAGC...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAAATGTGGTACCTCCTGTaGCAGAGAACAAAGAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKMWYLL*QRTKSL Trigger: TAAACTCTTTGTTCTCTGCAACAGGAGGTACCACAT...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAAATCGCAAAGCACAACTaGACTTTGAATGCTACAGCA | + |
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Preference number: 5 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKIAKHN*TLNATA Trigger: TGCTGTAGCATTCAAAGTCAAGTTGTGCTTTGCGAT...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | GTGGAGAAAAGGGAACGCTTATACACTACTAGTGGGAATGTAAATAAGTTCTGTAGACTGACCGTACTGTaGCTCCATATATTTAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: VEKRERLYTTSGNVNKFCRLTVL*LHIFKD Trigger: GTCTTTAAATATATGGAGCAACAGTACGGTCAGTCT...ACAGAACTTATTTACATTCCCACTAGTAGTGTATAAGCGTTCCCTTTTCTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544370.1 |
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| CDS-3UTR CAA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAAGAAGATCCATCGAGGTaGTTAGTCAAACACAAATTC | + |
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Preference number: 5 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKEDPSR*LVKHKF Trigger: GAATTTGTGTTTGACTAACAACCTCGATGGATCTTC...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTAATGTGGTACCTCCTGTaGCAGAGAACAAAGAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: EVGRRSIEVVSQTQIQILMWYLL*QRTKSL Trigger: TAAACTCTTTGTTCTCTGCAACAGGAGGTACCACAT...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATGCTTTCAATTCAGGTaGAACAATCTTCACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKCFQFR*NNLHSQ Trigger: TTGACTGTGAAGATTGTTCAACCTGAATTGAAAGCA...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | AATGGGAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAAATTACTTTTCTTTCATaGTCCGATGCCTTGGTATCT | + |
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Preference number: 5 (lower is better) Translates to: NGRLEEDPSRLLVKHKFKITFLS*SDALVS Trigger: AGATACCAAGGCATCGGACAATGAAAGAAAAGTAAT...TTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTCCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTAAGACTGACCGTACTGTaGCTCCATATATTTAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: EVGRRSIEVVSQTQIQILRLTVL*LHIFKD Trigger: GTCTTTAAATATATGGAGCAACAGTACGGTCAGTCT...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTAGAAGATCCATCGAGGTaGTTAGTCAAACACAAATTC | + |
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Preference number: 5 (lower is better) Translates to: EVGRRSIEVVSQTQIQILEDPSR*LVKHKF Trigger: GAATTTGTGTTTGACTAACAACCTCGATGGATCTTC...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | AAGTTCTGTCATTGTAGAAAGCAGTCTGACGATTTCTCAAAGAACATAAAACAGAGAGGTAAGGTACAATaGCAGCAGCTTTTTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: KFCHCRKQSDDFSKNIKQRGKVQ*QQLFVS Trigger: AGAAACAAAAAGCTGCTGCAATTGTACCTTACCTCT...CTGTTTTATGTTCTTTGAGAAATCGTCAGACTGCTTTCTACAATGACAGAACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544370.1 |
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| CDS-3UTR CAA 90 bp | TACACTACTAGTGGGAATGTAAATAAGTTCTGTCATTGTAGAAAGCAGTCTGACTATACTTTCAGGCATTaGGGTCATACTTACAAACAC | + |
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Preference number: 5 (lower is better) Translates to: YTTSGNVNKFCHCRKQSDYTFRH*GHTYKH Trigger: GTGTTTGTAAGTATGACCCAAATGCCTGAAAGTATA...GTCAGACTGCTTTCTACAATGACAGAACTTATTTACATTCCCACTAGTAGTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544370.1 |
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| CDS GCA 90 bp | TTGAACAATCTTCACAGTCAACAAGATAAATGTGGTACCTCCTGTTaGAGAGAACAAAGAGTTTATGACTTGAATTGCAACATAGATGAA | + |
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Preference number: 5 (lower is better) Translates to: LNNLHSQQDKCGTSC*REQRVYDLNCNIDE Trigger: TTCATCTATGTTGCAATTCAAGTCATAAACTCTTTGTTCTCTGCAACAGGAGGTACCACATTTATCTTGTTGACTGTGAAGATTGTTCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000261196.6 ENST00000381545.8 ENST00000544370.1 |
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| CDS-3UTR CAA 90 bp | GAGGTTGGAAGAAGATCCATCGAGGTTGTTAGTCAAACACAAATTCAAATTTTATGCTTTCAATTCAGGTaGAACAATCTTCACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: EVGRRSIEVVSQTQIQILCFQFR*NNLHSQ Trigger: TTGACTGTGAAGATTGTTCAACCTGAATTGAAAGCA...TAAAATTTGAATTTGTGTTTGACTAACAACCTCGATGGATCTTCTTCCAACCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261196.6 ENST00000381545.8 |
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| CDS-3UTR CAA 90 bp | AAGTTCTGTCATTGTAGAAAGCAGTCTGACGATTTCTCAAAGAACATAAAACAGTGCTTTCAATTCAGGTaGAACAATCTTCACAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: KFCHCRKQSDDFSKNIKQCFQFR*NNLHSQ Trigger: TTGACTGTGAAGATTGTTCAACCTGAATTGAAAGCA...CTGTTTTATGTTCTTTGAGAAATCGTCAGACTGCTTTCTACAATGACAGAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544370.1 |
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| CDS TCA 72 bp | GGTGGGAACAACGGGACAACACTTCAGGGCTATGCTTaGAGTCCATTTAAAACAGTAAACTCAGCATCGCAA | + |
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Preference number: 6 (lower is better) Translates to: GGNNGTTLQGYA*SPFKTVNSASQ Trigger: TTGCGATGCTGAGTTTACTGTTTTAAATGGACTTCAAGCATAGCCCTGAAGTGTTGTCCCGTTGTTCCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381545.8 |
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| CDS TCA 72 bp | CTGATGGGAAAACCTGTACAGCAGCAGGTGAAGTTGTaGAGCCTTACTGAGGATAATCAAAATTATCCCATG | + |
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Preference number: 6 (lower is better) Translates to: LMGKPVQQQVKL*SLTEDNQNYPM Trigger: CATGGGATAATTTTGATTATCCTCAGTAAGGCTTCACAACTTCACCTGCTGCTGTACAGGTTTTCCCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000545880.1 |
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