RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC9B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164038

Ensembl transcript IDs: ENST00000362026.7, ENST00000394785.9, ENST00000503103.5, ENST00000503230.5, ENST00000505838.1, ENST00000506288.5, ENST00000508136.1, ENST00000510976.1, ENST00000512806.1, ENST00000515424.5

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCATTGGCAAGCCAGGGAGAGAGACTTCACCAGAGCCCAACAATaGTGGCATCCTGATCTCGAACTTCCAACCTTTAATAGAAGTAAG +
Preference number: 1 (lower is better)
Translates to: GHWQARERDFTRAQQ*WHPDLELPTFNRSK
Trigger: CTTACTTCTATTAAAGGTTGGAAGTTCGAGATCAGGATGCCAGCATTGTTGGGCTCTGGTGAAGTCTCTCTCCCTGGCTTGCCAATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CCA 90 bp AATGTGGTGACAAACCCCGGCCTTCACATGGTGAGCCCTGCTGAATaGTCAGCCTCTGTCATTCTTGACCTCACCATCTCCATGATATAT +
Preference number: 1 (lower is better)
Translates to: NVVTNPGLHMVSPAE*SASVILDLTISMIY
Trigger: ATATATCATGGAGATGGTGAGGTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGGGTTTGTCACCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CCA 90 bp CATTGGCAAGCCAGGGAGAGAGACTTCACCAGAGCCCAACAATGCTaGCATCCTGATCTCGAACTTCCAACCTTTAATAGAAGTAAGTTT +
Preference number: 1 (lower is better)
Translates to: HWQARERDFTRAQQC*HPDLELPTFNRSKF
Trigger: AAACTTACTTCTATTAAAGGTTGGAAGTTCGAGATCAGGATGCCAGCATTGTTGGGCTCTGGTGAAGTCTCTCTCCCTGGCTTGCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CCA 90 bp TATTGGCAGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTaGACTTCCATTTCTAATTTTCCTAGGGGCCCTAAACATATTCAA +
Preference number: 1 (lower is better)
Translates to: YWQWLQVPFNHFCTL*TSISNFPRGPKHIQ
Trigger: TTGAATATGTTTAGGGCCCCTAGGAAAATTAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACTGCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CAA 90 bp CCTACTTTCTCTGGGAAGCTGTGCCTAAACTCCACCACCCTTGGATaGATTGAGTGCTCCTGCCATGAGCTCCCTAGCAGCCCTGTAGTT +
Preference number: 2 (lower is better)
Translates to: PTFSGKLCLNSTTLG*IECSCHELPSSPVV
Trigger: AACTACAGGGCTGCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAGGCACAGCTTCCCAGAGAAAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR CCA 90 bp CTAAACTCCACCACCCTTGGATTGATTGAGTGCTCCTGCCATGAGCTCCCTAGCATAAAGGAACCTGGGTaGTCAGCTAGGGGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: LNSTTLGLIECSCHELPSIKEPG*SARGQD
Trigger: ATCCTGCCCCCTAGCTGACCACCCAGGTTCCTTTAT...GCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR CCA 90 bp CTAAACTCCACCACCCTTGGATTGATTGAGTGCTCCTGCCATGAGCTCCCTAGCACACAGTGGAAGCTCTaGCCCCGAAAATCTGATGTT +
Preference number: 2 (lower is better)
Translates to: LNSTTLGLIECSCHELPSTQWKL*PRKSDV
Trigger: AACATCAGATTTTCGGGGCCAGAGCTTCCACTGTGT...GCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CAA 90 bp CTTATGTGGAAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTaGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: LMWKVVCERNESGAA*MVGPEALAFQSQSF
Trigger: GAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTTCCACATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
3UTR-3UTR TCA 90 bp ACAGGTATTGGCAGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGAACCTGGGAAACAGCATaGAGTGTAACACTTTTTGGT +
Preference number: 2 (lower is better)
Translates to: TGIGSGFRCPSIISVLCGTWETA*SVTLFG
Trigger: ACCAAAAAGTGTTACACTTCATGCTGTTTCCCAGGT...TCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACTGCCAATACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR GCA 90 bp AAGCCATGGTGGATAGGGCTCGAACAGAAGTCTAATGAAGAGAGGAATGGACAGACTGCTCAAGGTCATTaGCAAGGTCTGATTTTTCAC +
Preference number: 2 (lower is better)
Translates to: KPWWIGLEQKSNEERNGQTAQGH*QGLIFH
Trigger: GTGAAAAATCAGACCTTGGCAATGACCTTGAGCAGT...CTGTCCATTCCTCTCTTCATTAGACTTCTGTTCGAGCCCTATCCACCATGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR GCA 90 bp CACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCAGTCAGGCAGTGGCTTCAGGTaGCCTTCAATCATTTCTGTA +
Preference number: 2 (lower is better)
Translates to: HKFQRSNRGSQKASTGQSGSGFR*PSIISV
Trigger: TACAGAAATGATTGAAGGGCACCTGAAGCCACTGCC...TGACTGCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR CCA 90 bp AAGCCATGGTGGATAGGGCTCGAACAGAAGTCTAATGAAGAGAGGAATGGACAGAGAATGCTAAGCCTGTaGGAGTTATTTATATCCCAC +
Preference number: 2 (lower is better)
Translates to: KPWWIGLEQKSNEERNGQRMLSL*ELFISH
Trigger: GTGGGATATAAATAACTCCCACAGGCTTAGCATTCT...CTGTCCATTCCTCTCTTCATTAGACTTCTGTTCGAGCCCTATCCACCATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR TCA 90 bp CACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCAGTCAGCAAGTCACAATTTCTaGAATCCCTGCCATAGAAGT +
Preference number: 2 (lower is better)
Translates to: HKFQRSNRGSQKASTGQSASHNF*NPCHRS
Trigger: ACTTCTATGGCAGGGATTTCAGAAATTGTGACTTGC...TGACTGCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR GCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGTTCTCTGGGAAGCTGTaGCTAAACTCCACCACCCTT +
Preference number: 2 (lower is better)
Translates to: KLINIPSLLLGENATDDLFSGKL*LNSTTL
Trigger: AAGGGTGGTGGAGTTTAGGCACAGCTTCCCAGAGAA...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR CCA 90 bp TGGTGGGACCAATCAGTTACAGTAATTCAAAGAAAGGTAGTAAGGGAAGGAGAACAAGGCATCAGAGCCTaGGCAAATATGAATCAGGAA +
Preference number: 2 (lower is better)
Translates to: WWDQSVTVIQRKVVREGEQGIRA*ANMNQE
Trigger: TTCCTGATTCATATTTGCCCAGGCTCTGATGCCTTG...TTCTCCTTCCCTTACTACCTTTCTTTGAATTACTGTAACTGATTGGTCCCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR TCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGGAGGGGGCAAGAGGATaGACCAATGAAGATACTTCA +
Preference number: 2 (lower is better)
Translates to: KLINIPSLLLGENATDDLEGARG*TNEDTS
Trigger: TGAAGTATCTTCATTGGTTCATCCTCTTGCCCCCTC...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR GCA 90 bp ATAGGCACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCTCTACTTTTAGAGCCTaGAAAAATAGAGGACCAGAT +
Preference number: 2 (lower is better)
Translates to: IGTNFRDPIEEVKKPALGSTFRA*KNRGPD
Trigger: ATCTGGTCCTCTATTTTTGCAGGCTCTAAAAGTAGA...GCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTGCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR TCA 90 bp GTTGGTTCATTTGCATCTATACCTTTGAGCTTCATAACTGTCTCCTCCTGTGCTTCCTGTGGATGGTTCTaGATCTTCATATGTAATTCT +
Preference number: 2 (lower is better)
Translates to: VGSFASIPLSFITVSSCASCGWF*IFICNS
Trigger: AGAATTACATATGAAGATTCAGAACCATCCACAGGA...AGCACAGGAGGAGACAGTTATGAAGCTCAAAGGTATAGATGCAAATGAACCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508136.1
3UTR-3UTR CCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAATCATTACCACCCACATaGAAAGAGCAAGGGCTAAAA +
Preference number: 2 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKESLPPT*KEQGLK
Trigger: TTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
3UTR-3UTR GCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGGTCTTACATCCCTTTTaGTGGCTAAGTCCTAATCTT +
Preference number: 2 (lower is better)
Translates to: KLINIPSLLLGENATDDLVLHPF*WLSPNL
Trigger: AAGATTAGGACTTAGCCAGCAAAAGGGATGTAAGAC...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR CCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGAAGTGTAACACTTTTTaGTCTTACATCCCTTTTGCT +
Preference number: 2 (lower is better)
Translates to: KLINIPSLLLGENATDDLKCNTF*SYIPFA
Trigger: AGCAAAAGGGATGTAAGACCAAAAAGTGTTACACTT...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CCA 72 bp ACAAACCCCGGCCTTCACATGGTGAGCCCTGCTGAATaGTCAGCCTCTGTCATTCTTGACCTCACCATCTCC +
Preference number: 3 (lower is better)
Translates to: TNPGLHMVSPAE*SASVILDLTIS
Trigger: GGAGATGGTGAGGTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR TCA 72 bp CTTGCTCTCTCTCGGCATCAAGTGATGACACATGAGTaGGAGGGTGAGAATGTGGCCATTGGCAAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: LALSRHQVMTHE*EGENVAIGKPG
Trigger: CCCTGGCTTGCCAATGGCCACATTCTCACCCTCTCACTCATGTGTCATCACTTGATGCCGAGAGAGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR CAA 90 bp CCCGGCCTTCACATGGTGAGCCCTGCTGAATGGTCAGCCTCTGTCATTCTTGACTTCCAAGCCTGTTACTaGGAGAAAATGCCACTGATG +
Preference number: 3 (lower is better)
Translates to: PGLHMVSPAEWSASVILDFQACY*EKMPLM
Trigger: CATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAA...GTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR TCA 72 bp AAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTaGTGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: KLYVKEMKAELR*WWAQKLWPFSP
Trigger: GGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
3UTR GCA 72 bp CAAGCCAGGGAGAGAGACTTCACCAGAGCCCAACAATaGTGGCATCCTGATCTCGAACTTCCAACCTTTAAT +
Preference number: 3 (lower is better)
Translates to: QARERDFTRAQQ*WHPDLELPTFN
Trigger: ATTAAAGGTTGGAAGTTCGAGATCAGGATGCCAGCATTGTTGGGCTCTGGTGAAGTCTCTCTCCCTGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CCA 72 bp GCCAGGGAGAGAGACTTCACCAGAGCCCAACAATGCTaGCATCCTGATCTCGAACTTCCAACCTTTAATAGA +
Preference number: 3 (lower is better)
Translates to: ARERDFTRAQQC*HPDLELPTFNR
Trigger: TCTATTAAAGGTTGGAAGTTCGAGATCAGGATGCCAGCATTGTTGGGCTCTGGTGAAGTCTCTCTCCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR TCA 72 bp AATGGCAGAGCTTCAGGACAGAAAGACATGGGACTCTaGGCAGACCTCATAAGCAGAGTAACCCTGTTGGTA +
Preference number: 3 (lower is better)
Translates to: NGRASGQKDMGL*ADLISRVTLLV
Trigger: TACCAACAGGGTTACTCTGCTTATGAGGTCTGCTCAGAGTCCCATGTCTTTCTGTCCTGAAGCTCTGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR GCA 72 bp GAGTTGACATCACTGGGCATTTTAGCCAAAAAGCAGTaGTCGGGACTGCATGTGCCAGAAGTAAACTTGTCA +
Preference number: 3 (lower is better)
Translates to: ELTSLGILAKKQ*SGLHVPEVNLS
Trigger: TGACAAGTTTACTTCTGGCACATGCAGTCCCGAGCACTGCTTTTTGGCTAAAATGCCCAGTGATGTCAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362026.7
3UTR-3UTR CAA 90 bp GGCAAGTGTCTGGAACAAAGACGCTGTGTACAAAGTAAACACTTAATATACTGTGTGGGCCCAGAAGCTTaGGCCTTTCAGTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GKCLEQRRCVQSKHLIYCVGPEA*AFQSQS
Trigger: ACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCAC...ACAGTATATTAAGTGTTTACTTTGTACACAGCGTCTTTGTTCCAGACACTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
3UTR CCA 72 bp TGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTaGACTTCCATTTCTAATTTTCCTAGGGGCCCTAAA +
Preference number: 3 (lower is better)
Translates to: WLQVPFNHFCTL*TSISNFPRGPK
Trigger: TTTAGGGCCCCTAGGAAAATTAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CCA 72 bp GTTTCTATCTGTGGTTTAAGAGGGGATAGGTTGAGTTaGTCAGTACTCTATCAGGTTAACCCTAAGTTCACC +
Preference number: 3 (lower is better)
Translates to: VSICGLRGDRLS*SVLYQVNPKFT
Trigger: GGTGAACTTAGGGTTAACCTGATAGAGTACTGACCAACTCAACCTATCCCCTCTTAAACCACAGATAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR GCA 72 bp AGAATGCTAAGCCTGTGGGAGTTATTTATATCCCACTaGTCAAGGTCATTGCCAAGGTCTGATTTTTCACAA +
Preference number: 3 (lower is better)
Translates to: RMLSLWELFISH*SRSLPRSDFSQ
Trigger: TTGTGAAAAATCAGACCTTGGCAATGACCTTGAGCAGTGGGATATAAATAACTCCCACAGGCTTAGCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR-3UTR CAA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTTTTTCACCTCTAAACTaGCACAGAAGTCTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: WKEQGLKMLFKETATLLVFSPLN*HRSLSL
Trigger: CAAGGAGAGACTTCTGTGCAAGTTTAGAGGTGAAAA...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000503103.5
3UTR CCA 72 bp AAAAGAGAGCCAAAACCAATTCAAGGCATCAGAGCCTaGGCAAATATGAATCAGGAAACTGTGAAAGTTAAA +
Preference number: 3 (lower is better)
Translates to: KREPKPIQGIRA*ANMNQETVKVK
Trigger: TTTAACTTTCACAGTTTCCTGATTCATATTTGCCCAGGCTCTGATGCCTTGAATTGGTTTTGGCTCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
3UTR-3UTR CAA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAACACAGAAGTCTCTCCTaGAACTTCTTCATCTTTATT +
Preference number: 3 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEHRSLS*NFFIFI
Trigger: AATAAAGATGAAGAAGTTCAAGGAGAGACTTCTGTG...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503103.5
3UTR TCA 72 bp GGACTGAATTATGTCCTTCCCCACACATTCATATGTTaGAGCCTTAACTTCCAATGTGATGTATTTAGATAT +
Preference number: 3 (lower is better)
Translates to: GLNYVLPHTFIC*SLNFQCDVFRY
Trigger: ATATCTAAATACATCACATTGGAAGTTAAGGCTTCAACATATGAATGTGTGGGGAAGGACATAATTCAGTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CTAAACTCCACCACCCTTGGATTGATTGAGTGCTCCTGCCATGAGCTCCCTAGCCAGAGCCGCGTGCGATaGCTGGTGCGCGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LNSTTLGLIECSCHELPSQSRVR*LVRVAS
Trigger: GGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTG...GCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp AAGCCATGGTGGATAGGGCTCGAACAGAAGTCTAATGAAGAGAGGAATGGACAGGCGTGCGATGCCTGGTaGGCGTGGCTTCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: KPWWIGLEQKSNEERNGQACDAW*AWLPPE
Trigger: TTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGC...CTGTCCATTCCTCTCTTCATTAGACTTCTGTTCGAGCCCTATCCACCATGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCGCCGCGTGCGATGCCTaGTGCGCGTGGCTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGAACDA*CAWLPP
Trigger: CGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGC...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCAGTCAGGGTGCAGAGCCGCGTaGGATGCCTGGTGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: HKFQRSNRGSQKASTGQSGCRAA*DAWCAW
Trigger: CCACGCGCACCAGGCATCGCACGCGGCTCTGCACCC...TGACTGCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCAAGAGGAACGAGATCTaGCAGTCTCCGGCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: NESGAALMVGPEALAFQSKRNEI*QSPAKS
Trigger: CGACTTCGCCGGAGACTGCCAGATCTCGTTCCTCTT...GGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
3UTR CAA 72 bp TCTGGGAAGCTGTGCCTAAACTCCACCACCCTTGGATaGATTGAGTGCTCCTGCCATGAGCTCCCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGKLCLNSTTLG*IECSCHELPSS
Trigger: GCTGCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAGGCACAGCTTCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp GCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGCTGCAAAAGGAGCATTaGAGGCACCACAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: AALMVGPEALAFQSQSFQLQKEH*RHHNSW
Trigger: CCAGCTGTTGTGGTGCCTTCAATGCTCCTTTTGCAG...CTGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp GTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTAGCTGCCAGCTGCCATaGGCAAGGTTGGGACACCCT +
Preference number: 4 (lower is better)
Translates to: VVCERNESGAALMVGPEASCQLP*ARLGHP
Trigger: AGGGTGTCCCAACCTTGCTCATGGCAGCTGGCAGCT...AGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp AAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGCAAGAAGAGCAGATGTaGACGCCTCCACAATACAGG +
Preference number: 4 (lower is better)
Translates to: KRSCVDGGPRSFGLSVPKQEEQM*TPPQYR
Trigger: CCTGTATTGTGGAGGCGTGCACATCTGCTCTTCTTG...CTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp GCAGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCGCGCGGTCTTTCAGCTaGTTATCCTCCCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: AVASGALQSFLYSVDFHFARSFS*LSSLGG
Trigger: CCCGCCCAGGGAGGATAAGCAGCTGAAAGACCGCGC...GAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCCGGCCTTCACATGGTGAGCCCTGCTGAATGGTCAGCCTCTGTCATTCTTGACTTCTCTGGGAAGCTGTaGCTAAACTCCACCACCCTT +
Preference number: 4 (lower is better)
Translates to: PGLHMVSPAEWSASVILDFSGKL*LNSTTL
Trigger: AAGGGTGGTGGAGTTTAGGCACAGCTTCCCAGAGAA...GTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp GCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGCTGCAATGCCTACGGTaGCAACACAAAGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: AALMVGPEALAFQSQSFQLQCLR*QHKGLQ
Trigger: CTGTAGGCCTTTGTGTTGCCACCGTAGGCATTGCAG...CTGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp CACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCAGTCAGGAGTAAGCATGGGTTaGTCCGGGGCCCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HKFQRSNRGSQKASTGQSGVSMG*SGARSG
Trigger: GCCGCTGCGGGCCCCGGACCAACCCATGCTTACTCC...TGACTGCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CTAAACTCCACCACCCTTGGATTGATTGAGTGCTCCTGCCATGAGCTCCCTAGCACCCTGCAAGCAGCATaGCAAGAAGAGAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LNSTTLGLIECSCHELPSTLQAA*QEEKAV
Trigger: CACTGCCTTCTCTTCTTGGCATGCTGCTTGCAGGGT...GCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp GCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGTGGGCCCAGAAGCTTTaGCCTTTCAGTCCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: AALMVGPEALAFQSQSFQWAQKL*PFSPKV
Trigger: AACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCA...CTGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTCCCCCGGAAAGGTaGCGCCAGGCCGACCATGGG +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATLPPER*RQADHG
Trigger: CCCATGGTCGGCCTGGCGCCACCTTTCCGGGGGAAG...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CAA 72 bp CCAAGACGGCCTGAGCTTAAACTGCAGCGCTGTCACTaGCTAGCTATGGGACCTAGGCAAATACATCGTCTC +
Preference number: 4 (lower is better)
Translates to: PRRPELKLQRCH*LAMGPRQIHRL
Trigger: GAGACGATGTATTTGCCTAGGTCCCATAGCTAGCAAGTGACAGCGCTGCAGTTTAAGCTCAGGCCGTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp AGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAAACTGTCTCCTCCTGTaGTTCTTGATGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: SCVDGGPRSFGLSVPKFPNCLLL*FLMHGG
Trigger: CCCTCCATGCATCAAGAAGCACAGGAGGAGACAGTT...TGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp AGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCATTAGCCAAAAAGCAGTaGTCGGGACTGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: SCVDGGPRSFGLSVPKFPLAKKQ*SGLHVP
Trigger: TGGCACATGCAGTCCCGAGCACTGCTTTTTGGCTAA...TGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp TGTCTTCTCATCTGTAAAGGACGCTGTGGTGGTGGTGTGAGAATAAATGAGACACTAGCCACCGCGCTCTaGGGTTCCCGATTCGCGCAT +
Preference number: 4 (lower is better)
Translates to: CLLICKGRCGGGVRINETLATAL*GSRFAH
Trigger: ATGCGCGAATCGGGAACCCCAGAGCGCGGTGGCTAG...TGTCTCATTTATTCTCACACCACCACCACAGCGTCCTTTACAGATGAGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTACTAGCCACCGCGCTCTaGGGTTCCCGATTCGCGCAT +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLLATAL*GSRFAH
Trigger: ATGCGCGAATCGGGAACCCCAGAGCGCGGTGGCTAG...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGGTGCTTCTTGATGCATaGAGGGCGTGTAATTCATTC +
Preference number: 4 (lower is better)
Translates to: KRSCVDGGPRSFGLSVPKVLLDA*RACNSF
Trigger: GAATGAATTACACGCCCTCCATGCATCAAGAAGCAC...CTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp GTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTCCTCTGCCTTTTCGCTaGTCCATCCCATGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VVCERNESGAALMVGPEAPLPFR*SIPCLQ
Trigger: TTGCAGGCATGGGATGGACCAGCGAAAAGGCAGAGG...AGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp GGTGGTGGTGTGAGAATAAATGAGACATGGCAAGTGTCTGGAACAAAGACGCTGCTTCTTCAGGGCCTTTaGATCCAGACCAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGGVRINETWQVSGTKTLLLQGL*IQTKAS
Trigger: GCTGGCCTTGGTCTGGATTCAAAGGCCCTGAAGAAG...CAGCGTCTTTGTTCCAGACACTTGCCATGTCTCATTTATTCTCACACCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp ACATCACTGGGCATTTTAGCCAAAAAGCAGTGCTCGGGACTGCATGTGCCAGAACGTGCACAGTCCTCCTaGTCCAGGGAAACCAAAATG +
Preference number: 4 (lower is better)
Translates to: TSLGILAKKQCSGLHVPERAQSS*SRETKM
Trigger: CATTTTGGTTTCCCTGGATCAGGAGGACTGTGCACG...TTCTGGCACATGCAGTCCCGAGCACTGCTTTTTGGCTAAAATGCCCAGTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp GTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTGATCCTATTGCAGCCTaGACTGTGGCCTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VVCERNESGAALMVGPEADPIAA*TVAFGS
Trigger: GCTTCCAAAGGCCACAGTTCAGGCTGCAATAGGATC...AGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp AGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCATTGTTTCTCTCCATGTaGCCTTGCTGTGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SCVDGGPRSFGLSVPKFPLFLSM*PCCVQS
Trigger: GCTTTGGACACAGCAAGGTCACATGGAGAGAAACAA...TGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp GCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGTGGTGTGAGAATAAATaGGACATGGCAAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AALMVGPEALAFQSQSFQWCENK*DMASVW
Trigger: CCAGACACTTGCCATGTCTCATTTATTCTCACACCA...CTGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp AGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCATCTGATGAGAAACCCTaGAAGCAGCATGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SCVDGGPRSFGLSVPKFPSDEKP*KQHAKK
Trigger: CTTCTTGGCATGCTGCTTGCAGGGTTTCTCATCAGA...TGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp GGTGGTGGTGTGAGAATAAATGAGACATGGCAAGTGTCTGGAACAAAGACGCTGATCGAAGCTGCCAGCTaGCATGAGCAAGGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: GGGVRINETWQVSGTKTLIEAAS*HEQGWD
Trigger: GTCCCAACCTTGCTCATGGCAGCTGGCAGCTTCGAT...CAGCGTCTTTGTTCCAGACACTTGCCATGTCTCATTTATTCTCACACCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp CTAAACTCCACCACCCTTGGATTGATTGAGTGCTCCTGCCATGAGCTCCCTAGCCCAGGGAAACCAAAATaGACACTGCTGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: LNSTTLGLIECSCHELPSPGKPK*TLLNTA
Trigger: AGCTGTGTTCAGCAGTGTGCATTTTGGTTTCCCTGG...GCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp AAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGGTATCAATACTGCAATaGCTACGGTGGCAACACAAA +
Preference number: 4 (lower is better)
Translates to: KRSCVDGGPRSFGLSVPKVSILQ*LRWQHK
Trigger: TTTGTGTTGCCACCGTAGGCATTGCAGTATTGATAC...CTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTAGCGGCAGCCCCGTGTaGCCTCCGCCGGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVSGSPV*PPPGFR
Trigger: CCTGAAACCCGGCGGAGGGCACACGGGGCTGCCGCT...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTCTAGCCACCGCGCTCTaGGGTTCCCGATTCGCGCAT +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSLATAL*GSRFAH
Trigger: ATGCGCGAATCGGGAACCCCAGAGCGCGGTGGCTAG...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR CCA 90 bp AAGCCATGGTGGATAGGGCTCGAACAGAAGTCTAATGAAGAGAGGAATGGACAGAAGAGGAACGAGATCTaGCAGTCTCCGGCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: KPWWIGLEQKSNEERNGQKRNEI*QSPAKS
Trigger: CGACTTCGCCGGAGACTGCCAGATCTCGTTCCTCTT...CTGTCCATTCCTCTCTTCATTAGACTTCTGTTCGAGCCCTATCCACCATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CCCGGCCTTCACATGGTGAGCCCTGCTGAATGGTCAGCCTCTGTCATTCTTGACAAGGCCTACAGTTTCTaGTCTGAGAGATGCAATAGA +
Preference number: 4 (lower is better)
Translates to: PGLHMVSPAEWSASVILDKAYSF*SERCNR
Trigger: TCTATTGCATCTCTCAGACCAGAAACTGTAGGCCTT...GTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAAAGCAGACTTCCAATTaGGGCTGTGATGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SCVDGGPRSFGLSVPKFPKQTSN*GCDEDG
Trigger: TCCATCCTCATCACAGCCCCAATTGGAAGTCTGCTT...TGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp AGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATGATGCCTGGTGCGCGTaGCTTCCCCCGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRVTLLVLTNQPVSLDRNDAWCA*LPPERW
Trigger: CCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATC...ATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATAGATTCGCACGAACCCGCTaGGCGACACCGCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVTLLVLTNQPVSLDRNRFARTR*ATPRRE
Trigger: CTCCCTGCGCGGTGTCGCCCAGCGGGTTCGTGCGAA...TCTATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGAAGCTGCCAGCTGCCATaGGCAAGGTTGGGACACCCT +
Preference number: 4 (lower is better)
Translates to: PHKQSNPVGINEPASFIRSCQLP*ARLGHP
Trigger: AGGGTGTCCCAACCTTGCTCATGGCAGCTGGCAGCT...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTAGCTGCCAGCTGCCATaGGCAAGGTTGGGACACCCT +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSSCQLP*ARLGHP
Trigger: AGGGTGTCCCAACCTTGCTCATGGCAGCTGGCAGCT...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR TCA 90 bp AGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAAATACATCGTCTCCCTaGGGTTGTCTTCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: SCVDGGPRSFGLSVPKFPNTSSP*GCLLIC
Trigger: ACAGATGAGAAGACAACCTCAGGGAGACGATGTATT...TGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp CCTCCTGTGCTTCTTGATGCATGGAGGGCGTGTAATTCATTCCTGTGGATGGTTAACTGTCTCCTCCTGTaGTTCTTGATGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPVLLDAWRACNSFLWMVNCLLL*FLMHGG
Trigger: CCCTCCATGCATCAAGAAGCACAGGAGGAGACAGTT...AACCATCCACAGGAATGAATTACACGCCCTCCATGCATCAAGAAGCACAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508136.1
CDS-3UTR GCA 90 bp GGTGGTGGTGTGAGAATAAATGAGACATGGCAAGTGTCTGGAACAAAGACGCTGACCCTGCAAGCAGCATaGCAAGAAGAGAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGGVRINETWQVSGTKTLTLQAA*QEEKAV
Trigger: CACTGCCTTCTCTTCTTGGCATGCTGCTTGCAGGGT...CAGCGTCTTTGTTCCAGACACTTGCCATGTCTCATTTATTCTCACACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp AGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGAGGAAGACCACTTGTaGTTGATCTGCACATTATCG +
Preference number: 4 (lower is better)
Translates to: SCVDGGPRSFGLSVPKFPEEDHL*LICTLS
Trigger: CGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTC...TGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp GCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGAAAGTCAGCTTAAAGTaGAATGGTAGAAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: AALMVGPEALAFQSQSFQKVSLK*NGRRAR
Trigger: CCGTGCTCTTCTACCATTGCACTTTAAGCTGACTTT...CTGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTGGGTCCGCAGGCTTCTaGGGCCAGGACCAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVGSAGF*GQDQRA
Trigger: AGCTCGCTGGTCCTGGCCCCAGAAGCCTGCGGACCC...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATGCTGCTTATCCTCCCTaGGCGGGTCCGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRVTLLVLTNQPVSLDRNAAYPP*AGPQAS
Trigger: AGAAGCCTGCGGACCCGCCCAGGGAGGATAAGCAGC...ATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CCCGGCCTTCACATGGTGAGCCCTGCTGAATGGTCAGCCTCTGTCATTCTTGACAGAATGCTAAGCCTGTaGGAGTTATTTATATCCCAC +
Preference number: 4 (lower is better)
Translates to: PGLHMVSPAEWSASVILDRMLSL*ELFISH
Trigger: GTGGGATATAAATAACTCCCACAGGCTTAGCATTCT...GTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCCTTCTTCAGGGCCTTTaGATCCAGACCAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGLLQGL*IQTKAS
Trigger: GCTGGCCTTGGTCTGGATTCAAAGGCCCTGAAGAAG...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTAGCTGCCAGCTGCCATaGGCAAGGTTGGGACACCCT +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLSCQLP*ARLGHP
Trigger: AGGGTGTCCCAACCTTGCTCATGGCAGCTGGCAGCT...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTACTGCAAGGAAAGCCATaGCCAACGTGCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLLQGKP*PTCTVL
Trigger: GAGGACTGTGCACGTTGGTCATGGCTTTCCTTGCAG...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CTAAACTCCACCACCCTTGGATTGATTGAGTGCTCCTGCCATGAGCTCCCTAGCTCATTAAGTTTATGGTaGTCCCAGCAAAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: LNSTTLGLIECSCHELPSSLSLW*SQQSAP
Trigger: AGGTGCACTTTGCTGGGAGCACCATAAACTTAATGA...GCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp ACATCACTGGGCATTTTAGCCAAAAAGCAGTGCTCGGGACTGCATGTGCCAGAACACACAAGTTTGTCCTaGTCACGGCTTGGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: TSLGILAKKQCSGLHVPEHTSLS*SRLGKY
Trigger: GTACTTTCCAAGCCGTGACCAGGACAAACTTGTGTG...TTCTGGCACATGCAGTCCCGAGCACTGCTTTTTGGCTAAAATGCCCAGTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp CTAAACTCCACCACCCTTGGATTGATTGAGTGCTCCTGCCATGAGCTCCCTAGCGAAGGTAGACTCACATaGGCCACTGAAATAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LNSTTLGLIECSCHELPSEGRLT*ATEIKE
Trigger: TTCCTTTATTTCAGTGGCCCATGTGAGTCTACCTTC...GCTAGGGAGCTCATGGCAGGAGCACTCAATCAATCCAAGGGTGGTGGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
3UTR CAA 72 bp AAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTaGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: KVVCERNESGAA*MVGPEALAFQS
Trigger: GGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp AATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCAAAGTTTACCACCAATaGTGGCACAATAGAATAGGA +
Preference number: 4 (lower is better)
Translates to: NESGAALMVGPEALAFQSKVYHQ*WHNRIG
Trigger: TCCTATTCTATTGTGCCATCATTGGTGGTAAACTTT...GGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp ACAGGTATTGGCAGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACAAAATGCACACTGCTaGACACAGCTAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: TGIGSGFRCPSIISVLCGQNAHC*TQLAQT
Trigger: TGTCTGTGCTAGCTGTGTTCAGCAGTGTGCATTTTG...TCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACTGCCAATACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCCGTGCACAGTCCTCCTaGTCCAGGGAAACCAAAATG +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGRAQSS*SRETKM
Trigger: CATTTTGGTTTCCCTGGATCAGGAGGACTGTGCACG...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCCGGGAGGCTGCGTTaGCTGCAGATAAACGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETAGRLR*LQINGL
Trigger: GAGACCGTTTATCTGCAGTCAACGCAGCCTCCCGGC...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTGGCCCCGAAAATCTaGTGTTCCGTTCCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATLAPKI*CSVPPR
Trigger: CCTAGGAGGAACGGAACATCAGATTTTCGGGGCCAG...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACATGGTGAGCCCTGCTaGATGGTCAGCCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PHKQSNPVGINEPASFIRHGEPC*MVSLCH
Trigger: ATGACAGAGGCTGACCATTCAGCAGGGCTCACCATG...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCTGGCTTTCAATGTGGTaGCAAACCCCGGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGWLSMW*QTPAFT
Trigger: TGTGAAGGCCGGGGTTTGTCACCACATTGAAAGCCA...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp GTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTAGTATAAATCCCCATTaGCATGGTAAACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VVCERNESGAALMVGPEASINPH*HGKPSR
Trigger: CCTGCTGGGTTTACCATGGCAATGGGGATTTATACT...AGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp GGTGGTGGTGTGAGAATAAATGAGACATGGCAAGTGTCTGGAACAAAGACGCTGCCAGGGAAACCAAAATaGACACTGCTGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: GGGVRINETWQVSGTKTLPGKPK*TLLNTA
Trigger: AGCTGTGTTCAGCAGTGTGCATTTTGGTTTCCCTGG...CAGCGTCTTTGTTCCAGACACTTGCCATGTCTCATTTATTCTCACACCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp AGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAAATGTCCCAGGCAACTaGAATTATCTTTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: SCVDGGPRSFGLSVPKFPNVPGN*NYLFNL
Trigger: GAGGTTGAAAAGATAATTGCAGTTGCCTGGGACATT...TGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp ACATCACTGGGCATTTTAGCCAAAAAGCAGTGCTCGGGACTGCATGTGCCAGAATTCTGGTCTGAGAGATaGAATAGATACCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TSLGILAKKQCSGLHVPEFWSER*NRYLCS
Trigger: GGAGCAGAGGTATCTATTGCATCTCTCAGACCAGAA...TTCTGGCACATGCAGTCCCGAGCACTGCTTTTTGGCTAAAATGCCCAGTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp AAGCCATGGTGGATAGGGCTCGAACAGAAGTCTAATGAAGAGAGGAATGGACAGGGCAGTGGCTTCAGGTaGCCTTCAATCATTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KPWWIGLEQKSNEERNGQGSGFR*PSIISV
Trigger: TACAGAAATGATTGAAGGGCACCTGAAGCCACTGCC...CTGTCCATTCCTCTCTTCATTAGACTTCTGTTCGAGCCCTATCCACCATGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTATGCCATGAGCAAGGTTaGGACACCCTTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLCHEQG*DTLLNT
Trigger: GGTGTTGAGAAGGGTGTCCCAACCTTGCTCATGGCA...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCCTGCAATGCCTACGGTaGCAACACAAAGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGLQCLR*QHKGLQ
Trigger: CTGTAGGCCTTTGTGTTGCCACCGTAGGCATTGCAG...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503230.5
CDS-3UTR CCA 90 bp GCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGAGAATAAATGAGACATaGCAAGTGTCTGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: AALMVGPEALAFQSQSFQRINET*QVSGTK
Trigger: CTTTGTTCCAGACACTTGCCATGTCTCATTTATTCT...CTGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTCGTGCACAGTCCTCCTaGTCCAGGGAAACCAAAATG +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSRAQSS*SRETKM
Trigger: CATTTTGGTTTCCCTGGATCAGGAGGACTGTGCACG...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR TCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGCCGGCCTTCACATGGTaGGCCCTGCTGAATGGTCAG +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLPAFTW*ALLNGQ
Trigger: CTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGG...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCGCAATTAGATTTGGATaGGGTCATGAGGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGAIRFG*GHEGRA
Trigger: GGCCCTACCCTCATGACCTCATCCAAATCTAATTGC...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTAAACTGTCTCCTCCTGTaGTTCTTGATGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLNCLLL*FLMHGG
Trigger: CCCTCCATGCATCAAGAAGCACAGGAGGAGACAGTT...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCAACTGTCTCCTCCTGTaGTTCTTGATGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGNCLLL*FLMHGG
Trigger: CCCTCCATGCATCAAGAAGCACAGGAGGAGACAGTT...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp GCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGTTCTGTTGGTTCATTTaGATCTATACCTTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: AALMVGPEALAFQSQSFQFCWFI*IYTFEL
Trigger: AAGCTCAAAGGTATAGATGCAAATGAACCAACAGAA...CTGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTATCGAAGCTGCCAGCTaGCATGAGCAAGGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLIEAAS*HEQGWD
Trigger: GTCCCAACCTTGCTCATGGCAGCTGGCAGCTTCGAT...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp GTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTGAGGATGGACAAAAATaGCACTGTCAACACATCCAT +
Preference number: 4 (lower is better)
Translates to: VVCERNESGAALMVGPEAEDGQK*HCQHIH
Trigger: ATGGATGTGTTGACAGTGGCATTTTTGTCCATCCTC...AGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp CACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCAGTCAACCAGAGCCCAACAATaGTGGCATCCTGATCTCGAA +
Preference number: 4 (lower is better)
Translates to: HKFQRSNRGSQKASTGQSTRAQQ*WHPDLE
Trigger: TTCGAGATCAGGATGCCAGCATTGTTGGGCTCTGGT...TGACTGCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACAAGACACCAGAGAGCTTaGTTGCTCTCTCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATRHQRA*LLSLGI
Trigger: GATGCCGAGAGAGAGCAAGCAAGCTCTCTGGTGTCT...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp GCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGTTTCCAGTGTAATTCATTCCTGTaGATGGTTCTGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: AALMVGPEALAFQSQSFQCNSFL*MVLNLH
Trigger: ATGAAGATTCAGAACCATCCACAGGAATGAATTACA...CTGGAAACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACATGCCATGAGCAAGGTTaGGACACCCTTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATCHEQG*DTLLNT
Trigger: GGTGTTGAGAAGGGTGTCCCAACCTTGCTCATGGCA...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp CACAAAAGCAGAGATGGCCTGTTACAAAGTAGGATAAAATATGACCTATGCAGGCCTCTGCCTTTTCGCTaGTCCATCCCATGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: HKSRDGLLQSRIKYDLCRPLPFR*SIPCLQ
Trigger: TTGCAGGCATGGGATGGACCAGCGAAAAGGCAGAGG...CCTGCATAGGTCATATTTTATCCTACTTTGTAACAGGCCATCTCTGCTTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTAGTGAGCCCTGCTGAATaGTCAGCCTCTGTCATTCTT +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLVSPAE*SASVIL
Trigger: AAGAATGACAGAGGCTGACCATTCAGCAGGGCTCAC...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp GGTGGTGGTGTGAGAATAAATGAGACATGGCAAGTGTCTGGAACAAAGACGCTGCTCAGTCTTTGTACGTaGTTTGCTTCAGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GGGVRINETWQVSGTKTLLSLCT*FASVGV
Trigger: AACACCAACTGAAGCAAATCACGTACAAAGACTGAG...CAGCGTCTTTGTTCCAGACACTTGCCATGTCTCATTTATTCTCACACCACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp AATCTTATGTGGAAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGCTGCAAGGAAAGCCATaGCCAACGTGCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NLMWKVVCERNESGAALMLQGKP*PTCTVL
Trigger: GAGGACTGTGCACGTTGGTCATGGCTTTCCTTGCAG...CATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTTCCACATAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp TATCAGGTTAACCCTAAGTTCACCAACCAAGTCAAGAGATGTGGCTTTCAATGTGATCCTATTGCAGCCTaGACTGTGGCCTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: YQVNPKFTNQVKRCGFQCDPIAA*TVAFGS
Trigger: GCTTCCAAAGGCCACAGTTCAGGCTGCAATAGGATC...ACATTGAAAGCCACATCTCTTGACTTGGTTGGTGAACTTAGGGTTAACCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCAAAGACATGGGACTCTaGGCAGACCTCATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGKDMGL*ADLISR
Trigger: TCTGCTTATGAGGTCTGCTCAGAGTCCCATGTCTTT...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp CACAAAAGCAGAGATGGCCTGTTACAAAGTAGGATAAAATATGACCTATGCAGGGTGATGACACATGAGTaGGAGGGTGAGAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: HKSRDGLLQSRIKYDLCRVMTHE*EGENVA
Trigger: GGCCACATTCTCACCCTCTCACTCATGTGTCATCAC...CCTGCATAGGTCATATTTTATCCTACTTTGTAACAGGCCATCTCTGCTTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTCAAGAAGAGCAGATGTaGACGCCTCCACAATACAGG +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSQEEQM*TPPQYR
Trigger: CCTGTATTGTGGAGGCGTGCACATCTGCTCTTCTTG...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR GCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACAAGAAGAGCAGATGTaGACGCCTCCACAATACAGG +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATQEEQM*TPPQYR
Trigger: CCTGTATTGTGGAGGCGTGCACATCTGCTCTTCTTG...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATAGAATCGAAGCTGCCAGCTaGCATGAGCAAGGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: RVTLLVLTNQPVSLDRNRIEAAS*HEQGWD
Trigger: GTCCCAACCTTGCTCATGGCAGCTGGCAGCTTCGAT...TCTATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTACAATACAGGGACCCATaGACAGTCTTACACAAACGC +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLQYRDP*TVLHKR
Trigger: GCGTTTGTGTAAGACTGTCCATGGGTCCCTGTATTG...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCCACACAAGTTTGTCCTaGTCACGGCTTGGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGHTSLS*SRLGKY
Trigger: GTACTTTCCAAGCCGTGACCAGGACAAACTTGTGTG...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACACCTCTGCCTTTTCGCTaGTCCATCCCATGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETPLPFR*SIPCLQ
Trigger: TTGCAGGCATGGGATGGACCAGCGAAAAGGCAGAGG...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGGACAGAAAGACATaGGACTCTGAGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: PHKQSNPVGINEPASFIRQDRKT*DSEQTS
Trigger: TGAGGTCTGCTCAGAGTCCCATGTCTTTCTGTCCTG...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTAAATGAAAACAGGTATTaGCAGTGGCTTCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLNENRY*QWLQVP
Trigger: GGGCACCTGAAGCCACTGCCAATACCTGTTTTCATT...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp CCTCCTGTGCTTCTTGATGCATGGAGGGCGTGTAATTCATTCCTGTGGATGGTTTCCTGTGGATGGTTCTaGATCTTCATATGTAATTCT +
Preference number: 4 (lower is better)
Translates to: PPVLLDAWRACNSFLWMVSCGWF*IFICNS
Trigger: AGAATTACATATGAAGATTCAGAACCATCCACAGGA...AACCATCCACAGGAATGAATTACACGCCCTCCATGCATCAAGAAGCACAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508136.1
CDS-3UTR TCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGCTTCTTCAGGGCCTTTaGATCCAGACCAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLINIPSLLLGENATDDLLLQGL*IQTKAS
Trigger: GCTGGCCTTGGTCTGGATTCAAAGGCCCTGAAGAAG...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp AGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATAGACTGCAAAAGGAGCATTaGAGGCACCACAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RVTLLVLTNQPVSLDRNRLQKEH*RHHNSW
Trigger: CCAGCTGTTGTGGTGCCTTCAATGCTCCTTTTGCAG...TCTATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACAAAATGCACACTGCTaGACACAGCTAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATQNAHC*TQLAQT
Trigger: TGTCTGTGCTAGCTGTGTTCAGCAGTGTGCATTTTG...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGCTGCAAGGAAAGCCATaGCCAACGTGCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLLQGKP*PTCTVL
Trigger: GAGGACTGTGCACGTTGGTCATGGCTTTCCTTGCAG...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTCTGCAAGGAAAGCCATaGCCAACGTGCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVLQGKP*PTCTVL
Trigger: GAGGACTGTGCACGTTGGTCATGGCTTTCCTTGCAG...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGATCCTATTGCAGCCTaGACTGTGGCCTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETDPIAA*TVAFGS
Trigger: GCTTCCAAAGGCCACAGTTCAGGCTGCAATAGGATC...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503230.5
CDS-3UTR TCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTAGGGCCCTCATGCTGTaGTTAGAGTACCCTTATAAG +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSRALML*LEYPYK
Trigger: CTTATAAGGGTACTCTAATCACAGCATGAGGGCCCT...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTAGAGGAAGACCACTTGTaGTTGATCTGCACATTATCG +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLEEDHL*LICTLS
Trigger: CGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTC...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTATCGAAGCTGCCAGCTaGCATGAGCAAGGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVIEAAS*HEQGWD
Trigger: GTCCCAACCTTGCTCATGGCAGCTGGCAGCTTCGAT...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTAAAGAACAGATCCAGTTaGCACACCAATTACCACCTC +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLKNRSS*HTNYHL
Trigger: GAGGTGGTAATTGGTGTGGCAACTGGATCTGTTCTT...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACCAGGGAAACCAAAATaGACACTGCTGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATPGKPK*TLLNTA
Trigger: AGCTGTGTTCAGCAGTGTGCATTTTGGTTTCCCTGG...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp AATCTTATGTGGAAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGTGCCATGAGCAAGGTTaGGACACCCTTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: NLMWKVVCERNESGAALMCHEQG*DTLLNT
Trigger: GGTGTTGAGAAGGGTGTCCCAACCTTGCTCATGGCA...CATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTTCCACATAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACATGCCATGAGCAAGGTTaGGACACCCTTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETCHEQG*DTLLNT
Trigger: GGTGTTGAGAAGGGTGTCCCAACCTTGCTCATGGCA...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp TATCAGGTTAACCCTAAGTTCACCAACCAAGTCAAGAGATGTGGCTTTCAATGTTTGCAGCCTGAACTGTaGCCTTTGGAAGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: YQVNPKFTNQVKRCGFQCLQPEL*PLEAMQ
Trigger: TTGCATGGCTTCCAAAGGCCACAGTTCAGGCTGCAA...ACATTGAAAGCCACATCTCTTGACTTGGTTGGTGAACTTAGGGTTAACCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGAAAGCAGACTTCCAATTaGGGCTGTGATGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: PHKQSNPVGINEPASFIRKQTSN*GCDEDG
Trigger: TCCATCCTCATCACAGCCCCAATTGGAAGTCTGCTT...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTACACAGTGGAAGCTCTaGCCCCGAAAATCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSTQWKL*PRKSDV
Trigger: AACATCAGATTTTCGGGGCCAGAGCTTCCACTGTGT...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGAAACAGGTATTGGCAGTaGCTTCAGGTGCCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: PHKQSNPVGINEPASFIRNRYWQ*LQVPFN
Trigger: ATTGAAGGGCACCTGAAGCCACTGCCAATACCTGTT...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCAGTCAGGGGATAGGTTGAGTTaGTCAGTACTCTATCAGGTT +
Preference number: 4 (lower is better)
Translates to: HKFQRSNRGSQKASTGQSGDRLS*SVLYQV
Trigger: AACCTGATAGAGTACTGACCAACTCAACCTATCCCC...TGACTGCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp TTCATTTGCATCTATACCTTTGAGCTTCATAACTGTCTCCTCCTGTGCTTCTTGCGTATCAACTGTTCCTaGGCACACACAGTTGCACCT +
Preference number: 4 (lower is better)
Translates to: FICIYTFELHNCLLLCFLRINCS*AHTVAP
Trigger: AGGTGCAACTGTGTGTGCCCAGGAACAGTTGATACG...CAAGAAGCACAGGAGGAGACAGTTATGAAGCTCAAAGGTATAGATGCAAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508136.1
CDS-3UTR TCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTCTGCAAAAGGAGCATTaGAGGCACCACAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVLQKEH*RHHNSW
Trigger: CCAGCTGTTGTGGTGCCTTCAATGCTCCTTTTGCAG...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp ACTGCATGTGCCAGAAGTAAACTTGTCAAAACTCAGATTGTGTTTCCCCTAAAGCAAAATGCACACTGCTaGACACAGCTAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: TACARSKLVKTQIVFPLKQNAHC*TQLAQT
Trigger: TGTCTGTGCTAGCTGTGTTCAGCAGTGTGCATTTTG...CTTTAGGGGAAACACAATCTGAGTTTTGACAAGTTTACTTCTGGCACATGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGTTTCTCTCCATGTaGCCTTGCTGTGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLLFLSM*PCCVQS
Trigger: GCTTTGGACACAGCAAGGTCACATGGAGAGAAACAA...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCACCTGGGAAACAGCATaGAGTGTAACACTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGTWETA*SVTLFG
Trigger: ACCAAAAAGTGTTACACTTCATGCTGTTTCCCAGGT...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTGCATGCCATTTGTTATaGCCCTGTCCAGTAAACCAT +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSACHLL*PCPVNH
Trigger: ATGGTTTACTGGACAGGGTCATAACAAATGGCATGC...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503103.5
CDS-3UTR GCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACAGAGGAAGACCACTTGTaGTTGATCTGCACATTATCG +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATEEDHL*LICTLS
Trigger: CGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTC...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAACAAGAAGAGCAGATGTaGACGCCTCCACAATACAGG +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEQEEQM*TPPQYR
Trigger: CCTGTATTGTGGAGGCGTGCACATCTGCTCTTCTTG...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACAAAGAACAGATCCAGTTaGCACACCAATTACCACCTC +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATKNRSS*HTNYHL
Trigger: GAGGTGGTAATTGGTGTGGCAACTGGATCTGTTCTT...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTAGTATCAATACTGCAATaGCTACGGTGGCAACACAAA +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLVSILQ*LRWQHK
Trigger: TTTGTGTTGCCACCGTAGGCATTGCAGTATTGATAC...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp TGTCTTCTCATCTGTAAAGGACGCTGTGGTGGTGGTGTGAGAATAAATGAGACAAATTCGTATCAATACTaGAATGCCTACGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: CLLICKGRCGGGVRINETNSYQY*NAYGGN
Trigger: GTTGCCACCGTAGGCATTGCAGTATTGATACGAATT...TGTCTCATTTATTCTCACACCACCACCACAGCGTCCTTTACAGATGAGAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp CACAAAAGCAGAGATGGCCTGTTACAAAGTAGGATAAAATATGACCTATGCAGGGAGACAACACTTAGCTaGCTCACAGCCGGATATGAT +
Preference number: 4 (lower is better)
Translates to: HKSRDGLLQSRIKYDLCRETTLS*LTAGYD
Trigger: ATCATATCCGGCTGTGAGGCAGCTAAGTGTTGTCTC...CCTGCATAGGTCATATTTTATCCTACTTTGTAACAGGCCATCTCTGCTTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp AGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATAGATCTTCCCTCAGCCAATaGCCTACTTTCTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RVTLLVLTNQPVSLDRNRSSLSQ*PTFSGK
Trigger: CTTCCCAGAGAAAGTAGGGCATTGGCTGAGGGAAGA...TCTATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp TGTCTCCTCCTGTGCTTCTTGATGCATGGAGGGCGTGTAATTCATTCCTGTGGATGTAATTCATTCCTGTaGATGGTTCTGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: CLLLCFLMHGGRVIHSCGCNSFL*MVLNLH
Trigger: ATGAAGATTCAGAACCATCCACAGGAATGAATTACA...TCCACAGGAATGAATTACACGCCCTCCATGCATCAAGAAGCACAGGAGGAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508136.1
CDS-3UTR CCA 90 bp GTTGGTTCATTTGCATCTATACCTTTGAGCTTCATAACTGTCTCCTCCTGTGCTGTGCTTCTTGATGCATaGAGGGCGTGTAATTCATTC +
Preference number: 4 (lower is better)
Translates to: VGSFASIPLSFITVSSCAVLLDA*RACNSF
Trigger: GAATGAATTACACGCCCTCCATGCATCAAGAAGCAC...AGCACAGGAGGAGACAGTTATGAAGCTCAAAGGTATAGATGCAAATGAACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508136.1
CDS-3UTR CCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTCAATACAGGGACCCATaGACAGTCTTACACAAACGC +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLQYRDP*TVLHKR
Trigger: GCGTTTGTGTAAGACTGTCCATGGGTCCCTGTATTG...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp TATCAGGTTAACCCTAAGTTCACCAACCAAGTCAAGAGATGTGGCTTTCAATGTCACACAAGTTTGTCCTaGTCACGGCTTGGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: YQVNPKFTNQVKRCGFQCHTSLS*SRLGKY
Trigger: GTACTTTCCAAGCCGTGACCAGGACAAACTTGTGTG...ACATTGAAAGCCACATCTCTTGACTTGGTTGGTGAACTTAGGGTTAACCTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp TGTCTTCTCATCTGTAAAGGACGCTGTGGTGGTGGTGTGAGAATAAATGAGACAAAGGCCTACAGTTTCTaGTCTGAGAGATGCAATAGA +
Preference number: 4 (lower is better)
Translates to: CLLICKGRCGGGVRINETKAYSF*SERCNR
Trigger: TCTATTGCATCTCTCAGACCAGAAACTGTAGGCCTT...TGTCTCATTTATTCTCACACCACCACCACAGCGTCCTTTACAGATGAGAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGCTGCAATGCCTACGGTaGCAACACAAAGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: KLINIPSLLLGENATDDLLQCLR*QHKGLQ
Trigger: CTGTAGGCCTTTGTGTTGCCACCGTAGGCATTGCAG...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp ATAGGCACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCCTGAACTGTGGCCTTTaGAAGCCATGCAAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: IGTNFRDPIEEVKKPALGLNCGL*KPCKRN
Trigger: ATTTCTTTTGCATGGCTTCCAAAGGCCACAGTTCAG...GCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCCTGAACTGTGGCCTTTaGAAGCCATGCAAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGLNCGL*KPCKRN
Trigger: ATTTCTTTTGCATGGCTTCCAAAGGCCACAGTTCAG...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503230.5
CDS-3UTR CCA 90 bp AATCTTATGTGGAAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGTTGCAGCCTGAACTGTaGCCTTTGGAAGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: NLMWKVVCERNESGAALMLQPEL*PLEAMQ
Trigger: TTGCATGGCTTCCAAAGGCCACAGTTCAGGCTGCAA...CATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTTCCACATAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACATTGCAGCCTGAACTGTaGCCTTTGGAAGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETLQPEL*PLEAMQ
Trigger: TTGCATGGCTTCCAAAGGCCACAGTTCAGGCTGCAA...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503230.5
CDS-3UTR CCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTATCATTACCACCCACATaGAAAGAGCAAGGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLSLPPT*KEQGLK
Trigger: TTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACAAGGCATCAGAGCCTaGGCAAATATGAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATQGIRA*ANMNQE
Trigger: TTCCTGATTCATATTTGCCCAGGCTCTGATGCCTTG...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR CCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTATAAAGGAACCTGGGTaGTCAGCTAGGGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVIKEPG*SARGQD
Trigger: ATCCTGCCCCCTAGCTGACCACCCAGGTTCCTTTAT...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTAAGAGGAACTTATGAGTaGTACACAAAAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLRGTYE*YTKAEM
Trigger: CATCTCTGCTTTTGTGTATCACTCATAAGTTCCTCT...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCCTACCCATAGGGAGCTaGTTTAATAAGAGACAAACA +
Preference number: 4 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGLPIGS*FNKRQT
Trigger: TGTTTGTCTCTTATTAAATCAGCTCCCTATGGGTAG...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGAACTGTCTCCTCCTGTaGTTCTTGATGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLNCLLL*FLMHGG
Trigger: CCCTCCATGCATCAAGAAGCACAGGAGGAGACAGTT...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTACACTTGTGCTTGATCTaGACATTATCGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLHLCLI*TLSLMT
Trigger: AGTCATCAACGATAATGTGCAGATCAAGCACAAGTG...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTGAGGAAGACCACTTGTaGTTGATCTGCACATTATCG +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLEEDHL*LICTLS
Trigger: CGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTC...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp CACAAAAGCAGAGATGGCCTGTTACAAAGTAGGATAAAATATGACCTATGCAGGAGTATAAATCCCCATTaGCATGGTAAACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HKSRDGLLQSRIKYDLCRSINPH*HGKPSR
Trigger: CCTGCTGGGTTTACCATGGCAATGGGGATTTATACT...CCTGCATAGGTCATATTTTATCCTACTTTGTAACAGGCCATCTCTGCTTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp ACTGCATGTGCCAGAAGTAAACTTGTCAAAACTCAGATTGTGTTTCCCCTAAAGAAGAACAGATCCAGTTaGCACACCAATTACCACCTC +
Preference number: 4 (lower is better)
Translates to: TACARSKLVKTQIVFPLKKNRSS*HTNYHL
Trigger: GAGGTGGTAATTGGTGTGGCAACTGGATCTGTTCTT...CTTTAGGGGAAACACAATCTGAGTTTTGACAAGTTTACTTCTGGCACATGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACACCAGGGAAACCAAAATaGACACTGCTGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETPGKPK*TLLNTA
Trigger: AGCTGTGTTCAGCAGTGTGCATTTTGGTTTCCCTGG...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp TATCAGGTTAACCCTAAGTTCACCAACCAAGTCAAGAGATGTGGCTTTCAATGTGTCTACTGTGTTCCATaGCCTGTGAAAAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: YQVNPKFTNQVKRCGFQCVYCVP*PVKNAE
Trigger: CTCAGCATTTTTCACAGGGCATGGAACACAGTAGAC...ACATTGAAAGCCACATCTCTTGACTTGGTTGGTGAACTTAGGGTTAACCTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTCTGATGAGAAACCCTaGAAGCAGCATGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLSDEKP*KQHAIC
Trigger: ACAAATGGCATGCTGCTTGCAGGGTTTCTCATCAGA...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAAGCCACAGATCCTATTaGAGCCTACAGTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKESHRSY*SLQFLV
Trigger: GACCAGAAACTGTAGGCTGCAATAGGATCTGTGGCT...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503103.5
CDS-3UTR CCA 90 bp AGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATGTGCTTCTTGATGCATaGAGGGCGTGTAATTCATTC +
Preference number: 4 (lower is better)
Translates to: SRVTLLVLTNQPVSLDRNVLLDA*RACNSF
Trigger: GAATGAATTACACGCCCTCCATGCATCAAGAAGCAC...ATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AATCTTATGTGGAAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGCAATACAGGGACCCATaGACAGTCTTACACAAACGC +
Preference number: 4 (lower is better)
Translates to: NLMWKVVCERNESGAALMQYRDP*TVLHKR
Trigger: GCGTTTGTGTAAGACTGTCCATGGGTCCCTGTATTG...CATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTTCCACATAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAACAATACAGGGACCCATaGACAGTCTTACACAAACGC +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEQYRDP*TVLHKR
Trigger: GCGTTTGTGTAAGACTGTCCATGGGTCCCTGTATTG...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACACACACAAGTTTGTCCTaGTCACGGCTTGGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETHTSLS*SRLGKY
Trigger: GTACTTTCCAAGCCGTGACCAGGACAAACTTGTGTG...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACAAAGGCCTACAGTTTCTaGTCTGAGAGATGCAATAGA +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATKAYSF*SERCNR
Trigger: TCTATTGCATCTCTCAGACCAGAAACTGTAGGCCTT...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503230.5
CDS-3UTR CCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAAAGCAGACTTCCAATTaGGGCTGTGATGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEKQTSN*GCDEDG
Trigger: TCCATCCTCATCACAGCCCCAATTGGAAGTCTGCTT...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACATCATTACCACCCACATaGAAAGAGCAAGGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATSLPPT*KEQGLK
Trigger: TTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp GCAGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCGTCTGTTTTCTCTATTaGACTGTTAAATCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: AVASGALQSFLYSVDFHFVCFLY*TVKSLR
Trigger: CCTTAAGGATTTAACAGTCCAATAGAGAAAACAGAC...GAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACATTACATCCCTTTTGCTaGCTAAGTCCTAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATLHPFC*LSPNLP
Trigger: GGGAAGATTAGGACTTAGCCAGCAAAAGGGATGTAA...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp TGTCTTCTCATCTGTAAAGGACGCTGTGGTGGTGGTGTGAGAATAAATGAGACATCCTGTGGATGGTTCTaGATCTTCATATGTAATTCT +
Preference number: 4 (lower is better)
Translates to: CLLICKGRCGGGVRINETSCGWF*IFICNS
Trigger: AGAATTACATATGAAGATTCAGAACCATCCACAGGA...TGTCTCATTTATTCTCACACCACCACCACAGCGTCCTTTACAGATGAGAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR TCA 90 bp ATAGGCACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCTCCTGTGGATGGTTCTaGATCTTCATATGTAATTCT +
Preference number: 4 (lower is better)
Translates to: IGTNFRDPIEEVKKPALGSCGWF*IFICNS
Trigger: AGAATTACATATGAAGATTCAGAACCATCCACAGGA...GCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTGCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGCAAAATGCACACTGCTaGACACAGCTAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLQNAHC*TQLAQT
Trigger: TGTCTGTGCTAGCTGTGTTCAGCAGTGTGCATTTTG...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGTTGTTTCTCTCCATGTaGCCTTGCTGTGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLLFLSM*PCCVQS
Trigger: GCTTTGGACACAGCAAGGTCACATGGAGAGAAACAA...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTAAAGAGTTTGCTGCATaGCCTCAAAATGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSKEFAA*PQNENR
Trigger: CCTGTTTTCATTTTGAGGTCATGCAGCAAACTCTTT...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp AGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATAGAACTTCTTTCAGGGACTaGATTATGTCCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: RVTLLVLTNQPVSLDRNRTSFRD*IMSFPT
Trigger: TGTGGGGAAGGACATAATTCAGTCCCTGAAAGAAGT...TCTATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAGCATGCCATTTGTTATaGCCCTGTCCAGTAAACCAT +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEACHLL*PCPVNH
Trigger: ATGGTTTACTGGACAGGGTCATAACAAATGGCATGC...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGTCTGATGAGAAACCCTaGAAGCAGCATGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: KLINIPSLLLGENATDDLSDEKP*KQHAKK
Trigger: CTTCTTGGCATGCTGCTTGCAGGGTTTCTCATCAGA...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAATTCTGGTCTGAGAGATaGAATAGATACCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEFWSER*NRYLCS
Trigger: GGAGCAGAGGTATCTATTGCATCTCTCAGACCAGAA...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTGTATCAATACTGCAATaGCTACGGTGGCAACACAAA +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLVSILQ*LRWQHK
Trigger: TTTGTGTTGCCACCGTAGGCATTGCAGTATTGATAC...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503230.5
CDS-3UTR GCA 90 bp TATCAGGTTAACCCTAAGTTCACCAACCAAGTCAAGAGATGTGGCTTTCAATGTAATTCGTATCAATACTaGAATGCCTACGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: YQVNPKFTNQVKRCGFQCNSYQY*NAYGGN
Trigger: GTTGCCACCGTAGGCATTGCAGTATTGATACGAATT...ACATTGAAAGCCACATCTCTTGACTTGGTTGGTGAACTTAGGGTTAACCTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTAATTCGTATCAATACTaGAATGCCTACGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLNSYQY*NAYGGN
Trigger: GTTGCCACCGTAGGCATTGCAGTATTGATACGAATT...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503230.5
CDS-3UTR GCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTCAGCCCTGTAGTTCCTaGATAATAGCACTTATCATA +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSQPCSS*IIALII
Trigger: TATGATAAGTGCTATTATGCAGGAACTACAGGGCTG...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGTGCTTCTTGATGCATaGAGGGCGTGTAATTCATTC +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETVLLDA*RACNSF
Trigger: GAATGAATTACACGCCCTCCATGCATCAAGAAGCAC...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp ACTGCATGTGCCAGAAGTAAACTTGTCAAAACTCAGATTGTGTTTCCCCTAAAGCTGAACTGTGGCCTTTaGAAGCCATGCAAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: TACARSKLVKTQIVFPLKLNCGL*KPCKRN
Trigger: ATTTCTTTTGCATGGCTTCCAAAGGCCACAGTTCAG...CTTTAGGGGAAACACAATCTGAGTTTTGACAAGTTTACTTCTGGCACATGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTAAGCAGACTTCCAATTaGGGCTGTGATGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVKQTSN*GCDEDG
Trigger: TCCATCCTCATCACAGCCCCAATTGGAAGTCTGCTT...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGAAAAGTTTACCACCAATaGTGGCACAATAGAATAGGA +
Preference number: 4 (lower is better)
Translates to: PHKQSNPVGINEPASFIRKVYHQ*WHNRIG
Trigger: TCCTATTCTATTGTGCCATCATTGGTGGTAAACTTT...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp AGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATAGAGCAAGTCACAATTTCTaGAATCCCTGCCATAGAAGT +
Preference number: 4 (lower is better)
Translates to: RVTLLVLTNQPVSLDRNRASHNF*NPCHRS
Trigger: ACTTCTATGGCAGGGATTTCAGAAATTGTGACTTGC...TCTATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACATCTTTGTACGTGATTTaGTTCAGTTGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PPTWKEQGLKMLFKETATSLYVI*FSWCFL
Trigger: CAAGAAACACCAACTGAAGCAAATCACGTACAAAGA...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTAGTATAAATCCCCATTaGCATGGTAAACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVSINPH*HGKPSR
Trigger: CCTGCTGGGTTTACCATGGCAATGGGGATTTATACT...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTAAGAACAGATCCAGTTaGCACACCAATTACCACCTC +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVKNRSS*HTNYHL
Trigger: GAGGTGGTAATTGGTGTGGCAACTGGATCTGTTCTT...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAGAGGATGGACAAAAATaGCACTGTCAACACATCCAT +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEEDGQK*HCQHIH
Trigger: ATGGATGTGTTGACAGTGGCATTTTTGTCCATCCTC...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAGACAGGCTTTATTTATaGAGATCAGCTTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEDRLYL*RSAWWD
Trigger: ATCCCACCAAGCTGATCTGCATAAATAAAGCCTGTC...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTTCTACTTTTAGAGCCTaGAAAAATAGAGGACCAGAT +
Preference number: 4 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSSTFRA*KNRGPD
Trigger: ATCTGGTCCTCTATTTTTGCAGGCTCTAAAAGTAGA...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTTCTGATGAGAAACCCTaGAAGCAGCATGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVSDEKP*KQHAIC
Trigger: ACAAATGGCATGCTGCTTGCAGGGTTTCTCATCAGA...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGCAAGGCATCAGAGCCTaGGCAAATATGAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: KLINIPSLLLGENATDDLQGIRA*ANMNQE
Trigger: TTCCTGATTCATATTTGCCCAGGCTCTGATGCCTTG...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAAAGCCACCCAGTGTATaGTATTTTGTTATAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEKPPSV*YFVIAA
Trigger: GGCTGCTATAACAAAATACCATACACTGGGTGGCTT...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTGCAGCCTACAGTTTCTaGTCTGAGAGATGCAATAGA +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVAAYSF*SERCNR
Trigger: TCTATTGCATCTCTCAGACCAGAAACTGTAGGCTGC...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503103.5
3UTR CAA 72 bp GTAATTGTTTCTATCTGTGGTTTAAGAGGGGATAGGTaGAGTTGGTCAGTACTCTATCAGGTTAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: VIVSICGLRGDR*SWSVLYQVNPK
Trigger: CTTAGGGTTAACCTGATAGAGTACTGACCAACTCAACCTATCCCCTCTTAAACCACAGATAGAAACAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTCTTTGTACGTGATTTaGTTCAGTTGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLSLYVI*FSWCFL
Trigger: CAAGAAACACCAACTGAAGCAAATCACGTACAAAGA...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AATCTTATGTGGAAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGCACTTGTGCTTGATCTaGACATTATCGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: NLMWKVVCERNESGAALMHLCLI*TLSLMT
Trigger: AGTCATCAACGATAATGTGCAGATCAAGCACAAGTG...CATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTTCCACATAAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACACACTTGTGCTTGATCTaGACATTATCGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETHLCLI*TLSLMT
Trigger: AGTCATCAACGATAATGTGCAGATCAAGCACAAGTG...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATAGAAATGTCCCAGGCAACTaGAATTATCTTTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: RVTLLVLTNQPVSLDRNRNVPGN*NYLFNL
Trigger: GAGGTTGAAAAGATAATTGCAGTTGCCTGGGACATT...TCTATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAAATGTCCCAGGCAACTaGAATTATCTTTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETNVPGN*NYLFNL
Trigger: GAGGTTGAAAAGATAATTGCAGTTGCCTGGGACATT...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGGAGGATGGACAAAAATaGCACTGTCAACACATCCAT +
Preference number: 4 (lower is better)
Translates to: KLINIPSLLLGENATDDLEDGQK*HCQHIH
Trigger: ATGGATGTGTTGACAGTGGCATTTTTGTCCATCCTC...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGAGGATGGACAAAAATaGCACTGTCAACACATCCAT +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLEDGQK*HCQHIH
Trigger: ATGGATGTGTTGACAGTGGCATTTTTGTCCATCCTC...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAATTATTTATATCCCACTaGTCAAGGTCATTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKELFISH*SRSLPR
Trigger: CCTTGGCAATGACCTTGAGCAGTGGGATATAAATAA...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGATGTAATTCATTCCTGTaGATGGTTCTGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PHKQSNPVGINEPASFIRCNSFL*MVLNLH
Trigger: ATGAAGATTCAGAACCATCCACAGGAATGAATTACA...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CCA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGAAAGTGTAACACTTTTTaGTCTTACATCCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PHKQSNPVGINEPASFIRKCNTF*SYIPFA
Trigger: AGCAAAAGGGATGTAAGACCAAAAAGTGTTACACTT...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACATCCTGTGGATGGTTCTaGATCTTCATATGTAATTCT +
Preference number: 4 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETSCGWF*IFICNS
Trigger: AGAATTACATATGAAGATTCAGAACCATCCACAGGA...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR TCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGCCTCACAGCCGGATATaGTCAATACCAATAAATGTA +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLPHSRI*SIPINV
Trigger: TACATTTATTGGTATTGATCATATCCGGCTGTGAGG...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTCTGTTGGTTCATTTaGATCTATACCTTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PTWKEQGLKMLFKETATLFCWFI*IYTFEL
Trigger: AAGCTCAAAGGTATAGATGCAAATGAACCAACAGAA...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AATCTTATGTGGAAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGTCTTTGTACGTGATTTaGTTCAGTTGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: NLMWKVVCERNESGAALMSLYVI*FSWCFL
Trigger: CAAGAAACACCAACTGAAGCAAATCACGTACAAAGA...CATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTTCCACATAAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR GCA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAATCTTTGTACGTGATTTaGTTCAGTTGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKESLYVI*FSWCFL
Trigger: CAAGAAACACCAACTGAAGCAAATCACGTACAAAGA...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGCACTTGTGCTTGATCTaGACATTATCGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLHLCLI*TLSLMT
Trigger: AGTCATCAACGATAATGTGCAGATCAAGCACAAGTG...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGAATGTCCCAGGCAACTaGAATTATCTTTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLNVPGN*NYLFNL
Trigger: GAGGTTGAAAAGATAATTGCAGTTGCCTGGGACATT...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp AGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATTTATTCTTGATGATGTaGCTGGATCTCAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SRVTLLVLTNQPVSLDRNLFLMM*LDLKSF
Trigger: AAAGCTTTTGAGATCCAGGCACATCATCAAGAATAA...ATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTGTCTTACATCCCTTTTaGTGGCTAAGTCCTAATCTT +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVVLHPF*WLSPNL
Trigger: AAGATTAGGACTTAGCCAGCAAAAGGGATGTAAGAC...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR TCA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGCACACATTCATATGTTaGAGCCTTAACTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: KLINIPSLLLGENATDDLHTFIC*SLNFQC
Trigger: ACATTGGAAGTTAAGGCTTCAACATATGAATGTGTG...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR GCA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGTTCTGTTGGTTCATTTaGATCTATACCTTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TWKEQGLKMLFKETATLLFCWFI*IYTFEL
Trigger: AAGCTCAAAGGTATAGATGCAAATGAACCAACAGAA...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR GCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTTTCTGTTGGTTCATTTaGATCTATACCTTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVFCWFI*IYTFEL
Trigger: AAGCTCAAAGGTATAGATGCAAATGAACCAACAGAA...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CCA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTTGTAATTCATTCCTGTaGATGGTTCTGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: WKEQGLKMLFKETATLLVCNSFL*MVLNLH
Trigger: ATGAAGATTCAGAACCATCCACAGGAATGAATTACA...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS CCA 90 bp GTCCGGCGGCGCGGGTGCAGAGCCGCGTGCGATGCCTGGTGCGCGTaGCTTCCCCCGGAAAGGTGGCGCCAGGCCGACCATGGGCCCACG +
Preference number: 5 (lower is better)
Translates to: VRRRGCRAACDAWCA*LPPERWRQADHGPT
Trigger: CGTGGGCCCATGGTCGGCCTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCGGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 90 bp CGCCGGGTTTCAGGTCCGGCGGCGCGGGTGCAGAGCCGCGTGCGATaGCTGGTGCGCGTGGCTTCCCCCGGAAAGGTGGCGCCAGGCCGA +
Preference number: 5 (lower is better)
Translates to: RRVSGPAARVQSRVR*LVRVASPGKVAPGR
Trigger: TCGGCCTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCGGACCTGAAACCCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 90 bp CCCTCCGCCGGGTTTCAGGTCCGGCGGCGCGGGTGCAGAGCCGCGTaGGATGCCTGGTGCGCGTGGCTTCCCCCGGAAAGGTGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: PSAGFQVRRRGCRAA*DAWCAWLPPERWRQ
Trigger: CTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCGGACCTGAAACCCGGCGGAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 90 bp CAGCCCCGTGTGCCCTCCGCCGGGTTTCAGGTCCGGCGGCGCGGGTaGAGAGCCGCGTGCGATGCCTGGTGCGCGTGGCTTCCCCCGGAA +
Preference number: 5 (lower is better)
Translates to: QPRVPSAGFQVRRRG*RAACDAWCAWLPPE
Trigger: TTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCGGACCTGAAACCCGGCGGAGGGCACACGGGGCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS CCA 90 bp CTGGTGCGCGTGGCTTCCCCCGGAAAGGTGGCGCCAGGCCGACCATaGGCCCACGTCCCGGGGCCTCGGAGCGGCACCGCGCGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LVRVASPGKVAPGRP*AHVPGPRSGTARSF
Trigger: GAAAGACCGCGCGGTGCCGCTCCGAGGCCCCGGGACGTGGGCCCATGGTCGGCCTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS CCA 90 bp AGAGCCGCGTGCGATGCCTGGTGCGCGTGGCTTCCCCCGGAAAGGTaGCGCCAGGCCGACCATGGGCCCACGTCCCGGGGCCTCGGAGCG +
Preference number: 5 (lower is better)
Translates to: RAACDAWCAWLPPER*RQADHGPTSRGLGA
Trigger: CGCTCCGAGGCCCCGGGACGTGGGCCCATGGTCGGCCTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 90 bp GCCCACGTCCCGGGGCCTCGGAGCGGCACCGCGCGGTCTTTCAGCTaGTTATCCTCCCTGGGCGGGTCCGCAGGCTTCTGGGGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: AHVPGPRSGTARSFS*LSSLGGSAGFWGQD
Trigger: GTCCTGGCCCCAGAAGCCTGCGGACCCGCCCAGGGAGGATAAGCAGCTGAAAGACCGCGCGGTGCCGCTCCGAGGCCCCGGGACGTGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 90 bp TTTCAGGTCCGGCGGCGCGGGTGCAGAGCCGCGTGCGATGCCTGGTaGGCGTGGCTTCCCCCGGAAAGGTGGCGCCAGGCCGACCATGGG +
Preference number: 5 (lower is better)
Translates to: FQVRRRGCRAACDAW*AWLPPERWRQADHG
Trigger: CCCATGGTCGGCCTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCGGACCTGAAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS CCA 90 bp GGGGCTGTGGGGGAGGCGGCGGAGCCCGGTCTAGCCACCGCGCTCTaGGGTTCCCGATTCGCGCATCTTCCCAGGCTGAGCCGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GAVGEAAEPGLATAL*GSRFAHLPRLSREA
Trigger: AGCCTCCCGGCTCAGCCTGGGAAGATGCGCGAATCGGGAACCCCAGAGCGCGGTGGCTAGACCGGGCTCCGCCGCCTCCCCCACAGCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000505838.1
CDS CCA 90 bp GGCCTCGGAGCGGCACCGCGCGGTCTTTCAGCTGCTTATCCTCCCTaGGCGGGTCCGCAGGCTTCTGGGGCCAGGACCAGCGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GLGAAPRGLSAAYPP*AGPQASGARTSELP
Trigger: CGGGAGCTCGCTGGTCCTGGCCCCAGAAGCCTGCGGACCCGCCCAGGGAGGATAAGCAGCTGAAAGACCGCGCGGTGCCGCTCCGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS TCA 90 bp GCTTACCCAGAGAGCGCGGACCCAGGCGCCGAGTCTTCCCGGAGATaGCGAGACACCGCGAGAGGAGCACAGCGCAGGCTCCTCGGGACT +
Preference number: 5 (lower is better)
Translates to: AYPESADPGAESSRR*RDTARGAQRRLLGT
Trigger: AGTCCCGAGGAGCCTGCGCTGTGCTCCTCTCGCGGTGTCTCGTCATCTCCGGGAAGACTCGGCGCCTGGGTCCGCGCTCTCTGGGTAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512806.1
CDS CCA 90 bp CGGTCTTTCAGCTGCTTATCCTCCCTGGGCGGGTCCGCAGGCTTCTaGGGCCAGGACCAGCGAGCTCCCGGGAAAGCTTCCCGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: RSFSCLSSLGGSAGF*GQDQRAPGKASRKA
Trigger: AGCTTTCCGGGAAGCTTTCCCGGGAGCTCGCTGGTCCTGGCCCCAGAAGCCTGCGGACCCGCCCAGGGAGGATAAGCAGCTGAAAGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS TCA 90 bp CCTCTGCCTTTTCGCTGGTCCATCCCATGCCTGCAAGGAAAGCCATaGCCAACGTGCACAGTCCTCCTGATCCAGGGAAACCAAAATGCA +
Preference number: 5 (lower is better)
Translates to: PLPFRWSIPCLQGKP*PTCTVLLIQGNQNA
Trigger: TGCATTTTGGTTTCCCTGGATCAGGAGGACTGTGCACGTTGGTCATGGCTTTCCTTGCAGGCATGGGATGGACCAGCGAAAAGGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
CDS-3UTR CAA 90 bp AATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCATGCCCAAGCATGTGTaGAAGCCAGTGATGGCCAGA +
Preference number: 5 (lower is better)
Translates to: NESGAALMVGPEALAFQSMPKHV*KPVMAR
Trigger: TCTGGCCATCACTGGCTTCAACACATGCTTGGGCAT...GGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp CCCGGCCTTCACATGGTGAGCCCTGCTGAATGGTCAGCCTCTGTCATTCTTGACCTCTTACACACAAGTTaGTCCTGGTCACGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: PGLHMVSPAEWSASVILDLLHTS*SWSRLG
Trigger: TCCAAGCCGTGACCAGGACAAACTTGTGTGTAAGAG...GTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp AAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGGCGCTTCCTCTAAACTaGCACAGAAGTCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KRSCVDGGPRSFGLSVPKALPLN*HRSLSL
Trigger: CAAGGAGAGACTTCTGTGCAAGTTTAGAGGAAGCGC...CTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp TGGTGGGACCAATCAGTTACAGTAATTCAAAGAAAGGTAGTAAGGGAAGGAGAACGGAGTAAGCATGGGTaGGTCCGGGGCCCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: WWDQSVTVIQRKVVREGERSKHG*VRGPQR
Trigger: CCGCTGCGGGCCCCGGACCAACCCATGCTTACTCCG...TTCTCCTTCCCTTACTACCTTTCTTTGAATTACTGTAACTGATTGGTCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS CCA 90 bp GGGCAAGAAGAGCAGATGTGCACGCCTCCACAATACAGGGACCCATaGACAGTCTTACACAAACGCCCTTTAACTTCTTCAGGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GQEEQMCTPPQYRDP*TVLHKRPLTSSGPL
Trigger: CAAAGGCCCTGAAGAAGTTAAAGGGCGTTTGTGTAAGACTGTCCATGGGTCCCTGTATTGTGGAGGCGTGCACATCTGCTCTTCTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS-3UTR CAA 90 bp CCCGGCCTTCACATGGTGAGCCCTGCTGAATGGTCAGCCTCTGTCATTCTTGACGAAGACCACTTGTGCTaGATCTGCACATTATCGTTG +
Preference number: 5 (lower is better)
Translates to: PGLHMVSPAEWSASVILDEDHLC*ICTLSL
Trigger: CAACGATAATGTGCAGATCAAGCACAAGTGGTCTTC...GTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp CGCTGTCACTTGCTAGCTATGGGACCTAGGCAAATACATCGTCTCCCTGAGGTTACTTCTTCAGGGCCTTaGAATCCAGACCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: RCHLLAMGPRQIHRLPEVTSSGP*NPDQGQ
Trigger: CTGGCCTTGGTCTGGATTCAAAGGCCCTGAAGAAGT...AACCTCAGGGAGACGATGTATTTGCCTAGGTCCCATAGCTAGCAAGTGACAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp ACATCACTGGGCATTTTAGCCAAAAAGCAGTGCTCGGGACTGCATGTGCCAGAAGTGGGCCCAGAAGCTTaGGCCTTTCAGTCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: TSLGILAKKQCSGLHVPEVGPEA*AFQSQS
Trigger: ACTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCAC...TTCTGGCACATGCAGTCCCGAGCACTGCTTTTTGGCTAAAATGCCCAGTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp GCAGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCAGCCGGGAGGCTGCGTaGACTGCAGATAAACGGTCT +
Preference number: 5 (lower is better)
Translates to: AVASGALQSFLYSVDFHFSREAA*TADKRS
Trigger: AGACCGTTTATCTGCAGTCAACGCAGCCTCCCGGCT...GAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp GTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTCCTGCAAAAGGAGCATaGAAGGCACCACAACAGCTG +
Preference number: 5 (lower is better)
Translates to: VVCERNESGAALMVGPEAPAKGA*KAPQQL
Trigger: CAGCTGTTGTGGTGCCTTCAATGCTCCTTTTGCAGG...AGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp ACATCACTGGGCATTTTAGCCAAAAAGCAGTGCTCGGGACTGCATGTGCCAGAATCTCTCCATGTGACCTaGCTGTGTCCAAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: TSLGILAKKQCSGLHVPESLHVT*LCPKPQ
Trigger: CTGTGGCTTTGGACACAGCAAGGTCACATGGAGAGA...TTCTGGCACATGCAGTCCCGAGCACTGCTTTTTGGCTAAAATGCCCAGTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp CCCGGCCTTCACATGGTGAGCCCTGCTGAATGGTCAGCCTCTGTCATTCTTGACGAGGTAGAAAAGAGTTaGCTGCATGACCTCAAAATG +
Preference number: 5 (lower is better)
Translates to: PGLHMVSPAEWSASVILDEVEKS*LHDLKM
Trigger: CATTTTGAGGTCATGCAGCAAACTCTTTTCTACCTC...GTCAAGAATGACAGAGGCTGACCATTCAGCAGGGCTCACCATGTGAAGGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS TCA 90 bp AATGAATCTTTTCGCTGGTCCATCCCATGCCTGCAAGGAAAGCCATaGCCAACGTGCACAGTCCTCCTGATCCAGGGAAACCAAAATGCA +
Preference number: 5 (lower is better)
Translates to: NESFRWSIPCLQGKP*PTCTVLLIQGNQNA
Trigger: TGCATTTTGGTTTCCCTGGATCAGGAGGACTGTGCACGTTGGTCATGGCTTTCCTTGCAGGCATGGGATGGACCAGCGAAAAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510976.1
CDS GCA 90 bp ATTGCCATGGTAAACCCAGCAGGTAATGGGCAAGAAGAGCAGATGTaGACGCCTCCACAATACAGGGACCCATGGACAGTCTTACACAAA +
Preference number: 5 (lower is better)
Translates to: IAMVNPAGNGQEEQM*TPPQYRDPWTVLHK
Trigger: TTTGTGTAAGACTGTCCATGGGTCCCTGTATTGTGGAGGCGTGCACATCTGCTCTTCTTGCCCATTACCTGCTGGGTTTACCATGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS-3UTR CAA 90 bp AAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCCAAAGATCTGCACATTATCGTaGATGACTGGGATATTTCTG +
Preference number: 5 (lower is better)
Translates to: KRSCVDGGPRSFGLSVPKICTLS*MTGIFL
Trigger: CAGAAATATCCCAGTCATCAACGATAATGTGCAGAT...CTTTGGGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp AAGCCATGGTGGATAGGGCTCGAACAGAAGTCTAATGAAGAGAGGAATGGACAGTCTCTCCATGTGACCTaGCTGTGTCCAAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: KPWWIGLEQKSNEERNGQSLHVT*LCPKPQ
Trigger: CTGTGGCTTTGGACACAGCAAGGTCACATGGAGAGA...CTGTCCATTCCTCTCTTCATTAGACTTCTGTTCGAGCCCTATCCACCATGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp TGTCTTCTCATCTGTAAAGGACGCTGTGGTGGTGGTGTGAGAATAAATGAGACACTCCTCCTGTGCTTCTaGATGCATGGAGGGCGTGTA +
Preference number: 5 (lower is better)
Translates to: CLLICKGRCGGGVRINETLLLCF*MHGGRV
Trigger: TACACGCCCTCCATGCATCAAGAAGCACAGGAGGAG...TGTCTCATTTATTCTCACACCACCACCACAGCGTCCTTTACAGATGAGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp AATGAAAGCGGAGCTGCGTTGATGGTGGGCCCAGAAGCTTTGGCCTTTCAGTCCGTGCCAGAAGTAAACTaGTCAAAACTCAGATTGTGT +
Preference number: 5 (lower is better)
Translates to: NESGAALMVGPEALAFQSVPEVN*SKLRLC
Trigger: ACACAATCTGAGTTTTGACAAGTTTACTTCTGGCAC...GGACTGAAAGGCCAAAGCTTCTGGGCCCACCATCAACGCAGCTCCGCTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTCTCCTCCTGTGCTTCTaGATGCATGGAGGGCGTGTA +
Preference number: 5 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSLLLCF*MHGGRV
Trigger: TACACGCCCTCCATGCATCAAGAAGCACAGGAGGAG...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR CAA 90 bp CGCTGTCACTTGCTAGCTATGGGACCTAGGCAAATACATCGTCTCCCTGAGGTTAAAGAGGAAGACCACTaGTGCTTGATCTGCACATTA +
Preference number: 5 (lower is better)
Translates to: RCHLLAMGPRQIHRLPEVKEEDH*CLICTL
Trigger: TAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTT...AACCTCAGGGAGACGATGTATTTGCCTAGGTCCCATAGCTAGCAAGTGACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp ATAGGCACAAATTTCAGAGATCCAATAGAGGAAGTCAAAAAGCCAGCACTGGGCACTTCTTCAGGGCCTTaGAATCCAGACCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: IGTNFRDPIEEVKKPALGTSSGP*NPDQGQ
Trigger: CTGGCCTTGGTCTGGATTCAAAGGCCCTGAAGAAGT...GCCCAGTGCTGGCTTTTTGACTTCCTCTATTGGATCTCTGAAATTTGTGCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCAAGCCACAGATCCTATaGCAGCCTGAACTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGKPQIL*QPELWP
Trigger: AGGCCACAGTTCAGGCTGCAATAGGATCTGTGGCTT...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503230.5
CDS-3UTR CAA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTGAGACACCAGAGAGCTaGCTTGCTCTCTCTCGGCAT +
Preference number: 5 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSETPES*LALSRH
Trigger: ATGCCGAGAGAGAGCAAGCAAGCTCTCTGGTGTCTC...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTCTCCTCCTGTGCTTCTaGATGCATGGAGGGCGTGTA +
Preference number: 5 (lower is better)
Translates to: PTWKEQGLKMLFKETATLLLLCF*MHGGRV
Trigger: TACACGCCCTCCATGCATCAAGAAGCACAGGAGGAG...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TTCATTTGCATCTATACCTTTGAGCTTCATAACTGTCTCCTCCTGTGCTTCTTGCTCCTCCTGTGCTTCTaGATGCATGGAGGGCGTGTA +
Preference number: 5 (lower is better)
Translates to: FICIYTFELHNCLLLCFLLLLCF*MHGGRV
Trigger: TACACGCCCTCCATGCATCAAGAAGCACAGGAGGAG...CAAGAAGCACAGGAGGAGACAGTTATGAAGCTCAAAGGTATAGATGCAAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508136.1
CDS-3UTR CAA 90 bp GGCAAGTGTCTGGAACAAAGACGCTGTGTACAAAGTAAACACTTAATATACTGTCTGCAGCGCTGTCACTaGCTAGCTATGGGACCTAGG +
Preference number: 5 (lower is better)
Translates to: GKCLEQRRCVQSKHLIYCLQRCH*LAMGPR
Trigger: CCTAGGTCCCATAGCTAGCAAGTGACAGCGCTGCAG...ACAGTATATTAAGTGTTTACTTTGTACACAGCGTCTTTGTTCCAGACACTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp ACAGGTATTGGCAGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACACTGCTCAAGGTCATaGCCAAGGTCTGATTTTTCA +
Preference number: 5 (lower is better)
Translates to: TGIGSGFRCPSIISVLCGHCSRS*PRSDFS
Trigger: TGAAAAATCAGACCTTGGCAATGACCTTGAGCAGTG...TCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACTGCCAATACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS CCA 90 bp AGAGGAAGACCACTTGTGCTTGATCTGCACATTATCGTTGATGACTaGGATATTTCTGATGAGAAACCCTGCAAGCAGCATGCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: RGRPLVLDLHIIVDD*DISDEKPCKQHAKK
Trigger: CTTCTTGGCATGCTGCTTGCAGGGTTTCTCATCAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000506288.5
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACACTCCTCCTGTGCTTCTaGATGCATGGAGGGCGTGTA +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETLLLCF*MHGGRV
Trigger: TACACGCCCTCCATGCATCAAGAAGCACAGGAGGAG...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp CCTCCTGTGCTTCTTGATGCATGGAGGGCGTGTAATTCATTCCTGTGGATGGTTTTTGCATCTATACCTTaGAGCTTCATAACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: PPVLLDAWRACNSFLWMVFASIP*SFITVS
Trigger: GGAGACAGTTATGAAGCTCAAAGGTATAGATGCAAA...AACCATCCACAGGAATGAATTACACGCCCTCCATGCATCAAGAAGCACAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508136.1
CDS-3UTR CAA 90 bp ACATCACTGGGCATTTTAGCCAAAAAGCAGTGCTCGGGACTGCATGTGCCAGAACGTGATTTGCTTCAGTaGGTGTTTCTTGTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: TSLGILAKKQCSGLHVPERDLLQ*VFLVAF
Trigger: AAAAGCTACAAGAAACACCAACTGAAGCAAATCACG...TTCTGGCACATGCAGTCCCGAGCACTGCTTTTTGGCTAAAATGCCCAGTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp TGGTGGGACCAATCAGTTACAGTAATTCAAAGAAAGGTAGTAAGGGAAGGAGAAATGCCCAAGCATGTGTaGAAGCCAGTGATGGCCAGA +
Preference number: 5 (lower is better)
Translates to: WWDQSVTVIQRKVVREGEMPKHV*KPVMAR
Trigger: TCTGGCCATCACTGGCTTCAACACATGCTTGGGCAT...TTCTCCTTCCCTTACTACCTTTCTTTGAATTACTGTAACTGATTGGTCCCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTCTTACACACAAGTTaGTCCTGGTCACGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: PPTWKEQGLKMLFKETATLLHTS*SWSRLG
Trigger: TCCAAGCCGTGACCAGGACAAACTTGTGTGTAAGAG...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp CACAAAAGCAGAGATGGCCTGTTACAAAGTAGGATAAAATATGACCTATGCAGGAAGCCACAGATCCTATaGCAGCCTGAACTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: HKSRDGLLQSRIKYDLCRKPQIL*QPELWP
Trigger: AGGCCACAGTTCAGGCTGCAATAGGATCTGTGGCTT...CCTGCATAGGTCATATTTTATCCTACTTTGTAACAGGCCATCTCTGCTTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp AGTGGCTTCAGGTGCCCTTCAATCATTTCTGTACTCTGTGGACTTCCATTTCTAAGCAGAGTAACCCTGTaGGTATTAACGAACCAGCCA +
Preference number: 5 (lower is better)
Translates to: SGFRCPSIISVLCGLPFLSRVTL*VLTNQP
Trigger: TGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCT...TAGAAATGGAAGTCCACAGAGTACAGAAATGATTGAAGGGCACCTGAAGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGTGAGAATGTGGCCATaGGCAAGCCAGGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETVRMWP*ASQGER
Trigger: TCTCTCTCCCTGGCTTGCCAATGGCCACATTCTCAC...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS GCA 90 bp GACAGGGCTATGCTTCTCAAAGAGGAAGACCACTTGTGCTTGATCTaGACATTATCGTTGATGACTGGGATATTTCTGATGAGAAACCCT +
Preference number: 5 (lower is better)
Translates to: DRAMLLKEEDHLCLI*TLSLMTGIFLMRNP
Trigger: AGGGTTTCTCATCAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAGCATAGCCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS CCA 90 bp AGAGGAAGACCACTTGTGCTTGATCTGCACATTATCGTTGATGACTaGGATATTTCTGATGAGAAACCCTGCAAGCAGCATGCCATTTGT +
Preference number: 5 (lower is better)
Translates to: RGRPLVLDLHIIVDD*DISDEKPCKQHAIC
Trigger: ACAAATGGCATGCTGCTTGCAGGGTTTCTCATCAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503103.5
ENST00000503230.5
ENST00000515424.5
CDS-3UTR CAA 90 bp AAGCCATGGTGGATAGGGCTCGAACAGAAGTCTAATGAAGAGAGGAATGGACAGATCTGCACATTATCGTaGATGACTGGGATATTTCTG +
Preference number: 5 (lower is better)
Translates to: KPWWIGLEQKSNEERNGQICTLS*MTGIFL
Trigger: CAGAAATATCCCAGTCATCAACGATAATGTGCAGAT...CTGTCCATTCCTCTCTTCATTAGACTTCTGTTCGAGCCCTATCCACCATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp TGTCTTCTCATCTGTAAAGGACGCTGTGGTGGTGGTGTGAGAATAAATGAGACAGAAGACCACTTGTGCTaGATCTGCACATTATCGTTG +
Preference number: 5 (lower is better)
Translates to: CLLICKGRCGGGVRINETEDHLC*ICTLSL
Trigger: CAACGATAATGTGCAGATCAAGCACAAGTGGTCTTC...TGTCTCATTTATTCTCACACCACCACCACAGCGTCCTTTACAGATGAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCGAAGACCACTTGTGCTaGATCTGCACATTATCGTTG +
Preference number: 5 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGEDHLC*ICTLSL
Trigger: CAACGATAATGTGCAGATCAAGCACAAGTGGTCTTC...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAACTTCTTCAGGGCCTTaGAATCCAGACCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETTSSGP*NPDQGQ
Trigger: CTGGCCTTGGTCTGGATTCAAAGGCCCTGAAGAAGT...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACACCTGCAAAAGGAGCATaGAAGGCACCACAACAGCTG +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETPAKGA*KAPQQL
Trigger: CAGCTGTTGTGGTGCCTTCAATGCTCCTTTTGCAGG...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAATGCCCAAGCATGTGTaGAAGCCAGTGATGGCCAGA +
Preference number: 5 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKEMPKHV*KPVMAR
Trigger: TCTGGCCATCACTGGCTTCAACACATGCTTGGGCAT...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp GGCAAGTGTCTGGAACAAAGACGCTGTGTACAAAGTAAACACTTAATATACTGTAAGCCACAGATCCTATaGCAGCCTGAACTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GKCLEQRRCVQSKHLIYCKPQIL*QPELWP
Trigger: AGGCCACAGTTCAGGCTGCAATAGGATCTGTGGCTT...ACAGTATATTAAGTGTTTACTTTGTACACAGCGTCTTTGTTCCAGACACTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAATCTCTCCATGTGACCTaGCTGTGTCCAAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKESLHVT*LCPKPQ
Trigger: CTGTGGCTTTGGACACAGCAAGGTCACATGGAGAGA...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGCACCAGAGAGCTTGCTaGCTCTCTCTCGGCATCAAG +
Preference number: 5 (lower is better)
Translates to: KLINIPSLLLGENATDDLHQRAC*LSLGIK
Trigger: CTTGATGCCGAGAGAGAGCAAGCAAGCTCTCTGGTG...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTAAGCCACAGATCCTATaGCAGCCTACAGTTTCTGGT +
Preference number: 5 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSKPQIL*QPTVSG
Trigger: ACCAGAAACTGTAGGCTGCAATAGGATCTGTGGCTT...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503103.5
CDS TCA 90 bp TCTTACACACAAGTTTGTCCTGGTCACGGCTTGGAAAGTACTGAATaGAAAATCCAAGAACAGATCCAGTTGCCACACCAATTACCACCT +
Preference number: 5 (lower is better)
Translates to: SYTQVCPGHGLESTE*KIQEQIQLPHQLPP
Trigger: AGGTGGTAATTGGTGTGGCAACTGGATCTGTTCTTGGATTTTTCATTCAGTACTTTCCAAGCCGTGACCAGGACAAACTTGTGTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000510976.1
CDS-3UTR CAA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTACTTCTTCAGGGCCTTaGAATCCAGACCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: WKEQGLKMLFKETATLLVTSSGP*NPDQGQ
Trigger: CTGGCCTTGGTCTGGATTCAAAGGCCCTGAAGAAGT...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGCCTGCAAAAGGAGCATaGAAGGCACCACAACAGCTG +
Preference number: 5 (lower is better)
Translates to: TWKEQGLKMLFKETATLLPAKGA*KAPQQL
Trigger: CAGCTGTTGTGGTGCCTTCAATGCTCCTTTTGCAGG...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTCCTGCAAAAGGAGCATaGAAGGCACCACAACAGCTG +
Preference number: 5 (lower is better)
Translates to: WKEQGLKMLFKETATLLVPAKGA*KAPQQL
Trigger: CAGCTGTTGTGGTGCCTTCAATGCTCCTTTTGCAGG...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTATGCCCAAGCATGTGTaGAAGCCAGTGATGGCCAGA +
Preference number: 5 (lower is better)
Translates to: WKEQGLKMLFKETATLLVMPKHV*KPVMAR
Trigger: TCTGGCCATCACTGGCTTCAACACATGCTTGGGCAT...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp GGCAAGTGTCTGGAACAAAGACGCTGTGTACAAAGTAAACACTTAATATACTGTCTCTTACACACAAGTTaGTCCTGGTCACGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: GKCLEQRRCVQSKHLIYCLLHTS*SWSRLG
Trigger: TCCAAGCCGTGACCAGGACAAACTTGTGTGTAAGAG...ACAGTATATTAAGTGTTTACTTTGTACACAGCGTCTTTGTTCCAGACACTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACACTCTTACACACAAGTTaGTCCTGGTCACGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETLLHTS*SWSRLG
Trigger: TCCAAGCCGTGACCAGGACAAACTTGTGTGTAAGAG...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTTCTCTCCATGTGACCTaGCTGTGTCCAAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: WKEQGLKMLFKETATLLVSLHVT*LCPKPQ
Trigger: CTGTGGCTTTGGACACAGCAAGGTCACATGGAGAGA...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp GGTGGTGGTGTGAGAATAAATGAGACATGGCAAGTGTCTGGAACAAAGACGCTGCACAGAAGTCTCTCCTaGAACTTCTTCATCTTTATT +
Preference number: 5 (lower is better)
Translates to: GGGVRINETWQVSGTKTLHRSLS*NFFIFI
Trigger: AATAAAGATGAAGAAGTTCAAGGAGAGACTTCTGTG...CAGCGTCTTTGTTCCAGACACTTGCCATGTCTCATTTATTCTCACACCACCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS GCA 90 bp AGAATGATAGACAGGGCTATGCTTCTCAAAGAGGAAGACCACTTGTaGTTGATCTGCACATTATCGTTGATGACTGGGATATTTCTGATG +
Preference number: 5 (lower is better)
Translates to: RMIDRAMLLKEEDHL*LICTLSLMTGIFLM
Trigger: CATCAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAGCATAGCCCTGTCTATCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS GCA 90 bp ACGGCTTGGAAAGTACTGAATGAAAAATCCAAGAACAGATCCAGTTaGCACACCAATTACCACCTCCAAAACTCCTCTGAGGACATTAAA +
Preference number: 5 (lower is better)
Translates to: TAWKVLNEKSKNRSS*HTNYHLQNSSEDIK
Trigger: TTTAATGTCCTCAGAGGAGTTTTGGAGGTGGTAATTGGTGTGGCAACTGGATCTGTTCTTGGATTTTTCATTCAGTACTTTCCAAGCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000510976.1
CDS GCA 90 bp AGCAAAACACACCATCAGAAATGTAGTCAAAATTCGTATCAATACTaGAATGCCTACGGTGGCAACACAAAGGCCTACAGTTTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SKTHHQKCSQNSYQY*NAYGGNTKAYSFWS
Trigger: AGACCAGAAACTGTAGGCCTTTGTGTTGCCACCGTAGGCATTGCAGTATTGATACGAATTTTGACTACATTTCTGATGGTGTGTTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503230.5
CDS-3UTR CAA 90 bp TGTCTTCTCATCTGTAAAGGACGCTGTGGTGGTGGTGTGAGAATAAATGAGACATTTGCATCTATACCTTaGAGCTTCATAACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: CLLICKGRCGGGVRINETFASIP*SFITVS
Trigger: GGAGACAGTTATGAAGCTCAAAGGTATAGATGCAAA...TGTCTCATTTATTCTCACACCACCACCACAGCGTCCTTTACAGATGAGAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCGTCTTTGTACGTGATTaGCTTCAGTTGGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGVFVRD*LQLVFL
Trigger: AAGAAACACCAACTGAAGCAAATCACGTACAAAGAC...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTGAAGACCACTTGTGCTaGATCTGCACATTATCGTTG +
Preference number: 5 (lower is better)
Translates to: PTWKEQGLKMLFKETATLEDHLC*ICTLSL
Trigger: CAACGATAATGTGCAGATCAAGCACAAGTGGTCTTC...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTAAAGAGGAAGACCACTaGTGCTTGATCTGCACATTA +
Preference number: 5 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSKEEDH*CLICTL
Trigger: TAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTT...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR CAA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTTTTTCACCTCTAAACTaGCACAGAAGTCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSFSPLN*HRSLSL
Trigger: CAAGGAGAGACTTCTGTGCAAGTTTAGAGGTGAAAA...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR CAA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACATTTTCACCTCTAAACTaGCACAGAAGTCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PPTWKEQGLKMLFKETATFSPLN*HRSLSL
Trigger: CAAGGAGAGACTTCTGTGCAAGTTTAGAGGTGAAAA...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCGAATACTTCCTTCTGTaGGTTCATTTGCATCTATAC +
Preference number: 5 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGEYFLL*VHLHLY
Trigger: GTATAGATGCAAATGAACCAACAGAAGGAAGTATTC...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTCGTGATTTGCTTCAGTaGGTGTTTCTTGTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSRDLLQ*VFLVAF
Trigger: AAAAGCTACAAGAAACACCAACTGAAGCAAATCACG...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000503103.5
CDS-3UTR CAA 90 bp CCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACAGTCTTTGTACGTGATTaGCTTCAGTTGGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PPTWKEQGLKMLFKETATVFVRD*LQLVFL
Trigger: AAGAAACACCAACTGAAGCAAATCACGTACAAAGAC...TGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTAAAGAGGAAGACCACTaGTGCTTGATCTGCACATTA +
Preference number: 5 (lower is better)
Translates to: PTWKEQGLKMLFKETATLKEEDH*CLICTL
Trigger: TAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTT...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp GAGATTAAGGTTGGTGATATAGATCATTACCACCCACATGGAAAGAGCAAGGGCCACAGAAGTCTCTCCTaGAACTTCTTCATCTTTATT +
Preference number: 5 (lower is better)
Translates to: EIKVGDIDHYHPHGKSKGHRSLS*NFFIFI
Trigger: AATAAAGATGAAGAAGTTCAAGGAGAGACTTCTGTG...GCCCTTGCTCTTTCCATGTGGGTGGTAATGATCTATATCACCAACCTTAATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp CCTCATAAGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGAAAGACTGGCATAGATTaGAAACTTACCTATCTCCCA +
Preference number: 5 (lower is better)
Translates to: PHKQSNPVGINEPASFIRKTGID*KLTYLP
Trigger: TGGGAGATAGGTAAGTTTCAAATCTATGCCAGTCTT...TCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCTTATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp CTGAAGAGGATACTGAAGCTGGTCTTTCCCACATTAACTGTAAACTGTGGTAGTTTTATGCAGATCAGCTaGGTGGGATTAGGATATTCA +
Preference number: 5 (lower is better)
Translates to: LKRILKLVFPTLTVNCGSFMQIS*VGLGYS
Trigger: TGAATATCCTAATCCCACCAAGCTGATCTGCATAAA...ACTACCACAGTTTACAGTTAATGTGGGAAAGACCAGCTTCAGTATCCTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp CCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTAAGAGGGGATAGGTaGAGTTGGTCAGTACTCTAT +
Preference number: 5 (lower is better)
Translates to: PTWKEQGLKMLFKETATLLRGDR*SWSVLY
Trigger: ATAGAGTACTGACCAACTCAACCTATCCCCTCTTAA...AAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp AGCAGAGTAACCCTGTTGGTATTAACGAACCAGCCAGTTTCATTAGACAGAAATGTCTTTGTACGTGATTaGCTTCAGTTGGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SRVTLLVLTNQPVSLDRNVFVRD*LQLVFL
Trigger: AAGAAACACCAACTGAAGCAAATCACGTACAAAGAC...ATTTCTGTCTAATGAAACTGGCTGGTTCGTTAATACCAACAGGGTTACTCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAAAAGAGGAAGACCACTaGTGCTTGATCTGCACATTA +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETKEEDH*CLICTL
Trigger: TAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTT...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACATTTGCATCTATACCTTaGAGCTTCATAACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETFASIP*SFITVS
Trigger: GGAGACAGTTATGAAGCTCAAAGGTATAGATGCAAA...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp ACTGCATGTGCCAGAAGTAAACTTGTCAAAACTCAGATTGTGTTTCCCCTAAAGGAATACTTCCTTCTGTaGGTTCATTTGCATCTATAC +
Preference number: 5 (lower is better)
Translates to: TACARSKLVKTQIVFPLKEYFLL*VHLHLY
Trigger: GTATAGATGCAAATGAACCAACAGAAGGAAGTATTC...CTTTAGGGGAAACACAATCTGAGTTTTGACAAGTTTACTTCTGGCACATGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACACGTGATTTGCTTCAGTaGGTGTTTCTTGTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETRDLLQ*VFLVAF
Trigger: AAAAGCTACAAGAAACACCAACTGAAGCAAATCACG...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp AGATCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAACGTGATTTGCTTCAGTaGGTGTTTCTTGTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: RSLPPTWKEQGLKMLFKERDLLQ*VFLVAF
Trigger: AAAAGCTACAAGAAACACCAACTGAAGCAAATCACG...TTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp AATCTTATGTGGAAAGTTGTATGTGAAAGAAATGAAAGCGGAGCTGCGTTGATGGTCTTTGTACGTGATTaGCTTCAGTTGGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: NLMWKVVCERNESGAALMVFVRD*LQLVFL
Trigger: AAGAAACACCAACTGAAGCAAATCACGTACAAAGAC...CATCAACGCAGCTCCGCTTTCATTTCTTTCACATACAACTTTCCACATAAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362026.7
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAATCTGCACATTATCGTaGATGACTGGGATATTTCTG +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETICTLS*MTGIFL
Trigger: CAGAAATATCCCAGTCATCAACGATAATGTGCAGAT...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGTTTTCACCTCTAAACTaGCACAGAAGTCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TWKEQGLKMLFKETATLLFSPLN*HRSLSL
Trigger: CAAGGAGAGACTTCTGTGCAAGTTTAGAGGTGAAAA...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TCATTACCACCCACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAAGAAACCATTCATTCTaGTCTCTCAGGTCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SLPPTWKEQGLKMLFKETRNHSF*SLRSSF
Trigger: AAAAGAGGACCTGAGAGACAAGAATGAATGGTTTCT...TGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGTGGGTGGTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503230.5
CDS-3UTR CAA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGTTTGCATCTATACCTTaGAGCTTCATAACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TWKEQGLKMLFKETATLLFASIP*SFITVS
Trigger: GGAGACAGTTATGAAGCTCAAAGGTATAGATGCAAA...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp AAGTTAATAAATATTCCAAGCCTGTTACTTGGAGAAAATGCCACTGATGACCTGAGTAGTTTTCTGATATaGAGAGAGGATCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: KLINIPSLLLGENATDDLSSFLI*REDPLP
Trigger: AGGAAGAGGATCCTCTCTCAATATCAGAAAACTACT...CAGGTCATCAGTGGCATTTTCTCCAAGTAACAGGCTTGGAATATTTATTAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS-3UTR CAA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTGAATACTTCCTTCTGTaGGTTCATTTGCATCTATAC +
Preference number: 5 (lower is better)
Translates to: WKEQGLKMLFKETATLLVEYFLL*VHLHLY
Trigger: GTATAGATGCAAATGAACCAACAGAAGGAAGTATTC...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp ACATGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGCACAGAAGTCTCTCCTaGAACTTCTTCATCTTTATT +
Preference number: 5 (lower is better)
Translates to: TWKEQGLKMLFKETATLLHRSLS*NFFIFI
Trigger: AATAAAGATGAAGAAGTTCAAGGAGAGACTTCTGTG...CAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS-3UTR CAA 90 bp TGGAAAGAGCAAGGGCTAAAAATGCTGTTTAAAGAAACAGCTACACTTTTGGTTCACAGAAGTCTCTCCTaGAACTTCTTCATCTTTATT +
Preference number: 5 (lower is better)
Translates to: WKEQGLKMLFKETATLLVHRSLS*NFFIFI
Trigger: AATAAAGATGAAGAAGTTCAAGGAGAGACTTCTGTG...AACCAAAAGTGTAGCTGTTTCTTTAAACAGCATTTTTAGCCCTTGCTCTTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
CDS GCA 72 bp CGGCGGCGCGGGTGCAGAGCCGCGTGCGATGCCTGGTaGGCGTGGCTTCCCCCGGAAAGGTGGCGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RRRGCRAACDAW*AWLPPERWRQA
Trigger: GGCCTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS CCA 72 bp GTGGCTTCCCCCGGAAAGGTGGCGCCAGGCCGACCATaGGCCCACGTCCCGGGGCCTCGGAGCGGCACCGCG +
Preference number: 6 (lower is better)
Translates to: VASPGKVAPGRP*AHVPGPRSGTA
Trigger: CGCGGTGCCGCTCCGAGGCCCCGGGACGTGGGCCCATGGTCGGCCTGGCGCCACCTTTCCGGGGGAAGCCAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 72 bp TCAGGTCCGGCGGCGCGGGTGCAGAGCCGCGTGCGATaGCTGGTGCGCGTGGCTTCCCCCGGAAAGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SGPAARVQSRVR*LVRVASPGKVA
Trigger: CGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCGGACCTGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 72 bp GTGCCCTCCGCCGGGTTTCAGGTCCGGCGGCGCGGGTaGAGAGCCGCGTGCGATGCCTGGTGCGCGTGGCTT +
Preference number: 6 (lower is better)
Translates to: VPSAGFQVRRRG*RAACDAWCAWL
Trigger: AAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCGGACCTGAAACCCGGCGGAGGGCAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS CCA 72 bp TGCGATGCCTGGTGCGCGTGGCTTCCCCCGGAAAGGTaGCGCCAGGCCGACCATGGGCCCACGTCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: CDAWCAWLPPER*RQADHGPTSRG
Trigger: GCCCCGGGACGTGGGCCCATGGTCGGCCTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 72 bp GGGTTTCAGGTCCGGCGGCGCGGGTGCAGAGCCGCGTaGGATGCCTGGTGCGCGTGGCTTCCCCCGGAAAGG +
Preference number: 6 (lower is better)
Translates to: GFQVRRRGCRAA*DAWCAWLPPER
Trigger: CCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCGCCGCCGGACCTGAAACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS CCA 72 bp CGCGGGTGCAGAGCCGCGTGCGATGCCTGGTGCGCGTaGCTTCCCCCGGAAAGGTGGCGCCAGGCCGACCAT +
Preference number: 6 (lower is better)
Translates to: RGCRAACDAWCA*LPPERWRQADH
Trigger: ATGGTCGGCCTGGCGCCACCTTTCCGGGGGAAGCCACGCGCACCAGGCATCGCACGCGGCTCTGCACCCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS GCA 72 bp CCGGGGCCTCGGAGCGGCACCGCGCGGTCTTTCAGCTaGTTATCCTCCCTGGGCGGGTCCGCAGGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PGPRSGTARSFS*LSSLGGSAGFW
Trigger: CCAGAAGCCTGCGGACCCGCCCAGGGAGGATAAGCAGCTGAAAGACCGCGCGGTGCCGCTCCGAGGCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS CCA 72 bp GGGGAGGCGGCGGAGCCCGGTCTAGCCACCGCGCTCTaGGGTTCCCGATTCGCGCATCTTCCCAGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: GEAAEPGLATAL*GSRFAHLPRLS
Trigger: GCTCAGCCTGGGAAGATGCGCGAATCGGGAACCCCAGAGCGCGGTGGCTAGACCGGGCTCCGCCGCCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394785.9
ENST00000503103.5
ENST00000505838.1
CDS TCA 72 bp GAGAGCGCGGACCCAGGCGCCGAGTCTTCCCGGAGATaGCGAGACACCGCGAGAGGAGCACAGCGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: ESADPGAESSRR*RDTARGAQRRL
Trigger: GAGCCTGCGCTGTGCTCCTCTCGCGGTGTCTCGTCATCTCCGGGAAGACTCGGCGCCTGGGTCCGCGCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512806.1
CDS CCA 72 bp AGCTGCTTATCCTCCCTGGGCGGGTCCGCAGGCTTCTaGGGCCAGGACCAGCGAGCTCCCGGGAAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SCLSSLGGSAGF*GQDQRAPGKAS
Trigger: GGAAGCTTTCCCGGGAGCTCGCTGGTCCTGGCCCCAGAAGCCTGCGGACCCGCCCAGGGAGGATAAGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394785.9
ENST00000512806.1
CDS CAA 72 bp TTCGCGCATCTTCCCAGGCTGAGCCGGGAGGCTGCGTaGACTGCAGATAAACGGTCTCAGGGCGCGGCACCG +
Preference number: 6 (lower is better)
Translates to: FAHLPRLSREAA*TADKRSQGAAP
Trigger: CGGTGCCGCGCCCTGAGACCGTTTATCTGCAGTCAACGCAGCCTCCCGGCTCAGCCTGGGAAGATGCGCGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS CAA 90 bp GGTTCCCGATTCGCGCATCTTCCCAGGCTGAGCCGGGAGGCTGCGTaGACTGCAGATAAACGGTCTCAGGGCGCGGCACCGCGTGTAGTC +
Preference number: 6 (lower is better)
Translates to: GSRFAHLPRLSREAA*TADKRSQGAAPRVV
Trigger: GACTACACGCGGTGCCGCGCCCTGAGACCGTTTATCTGCAGTCAACGCAGCCTCCCGGCTCAGCCTGGGAAGATGCGCGAATCGGGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394785.9
CDS CAA 90 bp GCAGGCTCCTCGGGACTCCGCGGCGCAGGCCGGGCAGCCCGTTACTaGTTTTATCGTTCCCGAAACCAACCTCTAAGTTGTCTATCAGTC +
Preference number: 6 (lower is better)
Translates to: AGSSGLRGAGRAARY*FYRSRNQPLSCLSV
Trigger: GACTGATAGACAACTTAGAGGTTGGTTTCGGGAACGATAAAACAAGTAACGGGCTGCCCGGCCTGCGCCGCGGAGTCCCGAGGAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512806.1
CDS CAA 72 bp TCGGGACTCCGCGGCGCAGGCCGGGCAGCCCGTTACTaGTTTTATCGTTCCCGAAACCAACCTCTAAGTTGT +
Preference number: 6 (lower is better)
Translates to: SGLRGAGRAARY*FYRSRNQPLSC
Trigger: ACAACTTAGAGGTTGGTTTCGGGAACGATAAAACAAGTAACGGGCTGCCCGGCCTGCGCCGCGGAGTCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512806.1
CDS TCA 72 bp TTTCGCTGGTCCATCCCATGCCTGCAAGGAAAGCCATaGCCAACGTGCACAGTCCTCCTGATCCAGGGAAAC +
Preference number: 6 (lower is better)
Translates to: FRWSIPCLQGKP*PTCTVLLIQGN
Trigger: GTTTCCCTGGATCAGGAGGACTGTGCACGTTGGTCATGGCTTTCCTTGCAGGCATGGGATGGACCAGCGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000510976.1
CDS TCA 72 bp TGCAAGGAAAGCCATGACCAACGTGCACAGTCCTCCTaGTCCAGGGAAACCAAAATGCACACTGCTGAACAC +
Preference number: 6 (lower is better)
Translates to: CKESHDQRAQSS*SRETKMHTAEH
Trigger: GTGTTCAGCAGTGTGCATTTTGGTTTCCCTGGATCAGGAGGACTGTGCACGTTGGTCATGGCTTTCCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000510976.1
CDS CCA 72 bp GAGCAGATGTGCACGCCTCCACAATACAGGGACCCATaGACAGTCTTACACAAACGCCCTTTAACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: EQMCTPPQYRDP*TVLHKRPLTSS
Trigger: TGAAGAAGTTAAAGGGCGTTTGTGTAAGACTGTCCATGGGTCCCTGTATTGTGGAGGCGTGCACATCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS GCA 72 bp GACAGGGCTATGCTTCTCAAAGAGGAAGACCACTTGTaGTTGATCTGCACATTATCGTTGATGACTGGGATA +
Preference number: 6 (lower is better)
Translates to: DRAMLLKEEDHL*LICTLSLMTGI
Trigger: TATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAGCATAGCCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS CAA 72 bp ATAGACAGGGCTATGCTTCTCAAAGAGGAAGACCACTaGTGCTTGATCTGCACATTATCGTTGATGACTGGG +
Preference number: 6 (lower is better)
Translates to: IDRAMLLKEEDH*CLICTLSLMTG
Trigger: CCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAGCATAGCCCTGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS CAA 90 bp CTTCTCAAAGAGGAAGACCACTTGTGCTTGATCTGCACATTATCGTaGATGACTGGGATATTTCTGATGAGAAACCCTGCAAGCAGCATG +
Preference number: 6 (lower is better)
Translates to: LLKEEDHLCLICTLS*MTGIFLMRNPASSM
Trigger: CATGCTGCTTGCAGGGTTTCTCATCAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS TCA 72 bp CAAGTTTGTCCTGGTCACGGCTTGGAAAGTACTGAATaGAAAATCCAAGAACAGATCCAGTTGCCACACCAA +
Preference number: 6 (lower is better)
Translates to: QVCPGHGLESTE*KIQEQIQLPHQ
Trigger: TTGGTGTGGCAACTGGATCTGTTCTTGGATTTTTCATTCAGTACTTTCCAAGCCGTGACCAGGACAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000510976.1
CDS TCA 72 bp ACGTTAGGTGGAATCCGGTATCTCTTTAACAGGCATTaGATCAGGTGTAGGCAAAAGACCACGACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: TLGGIRYLFNRH*IRCRQKTTTSS
Trigger: TGAAGAAGTCGTGGTCTTTTGCCTACACCTGATTCAATGCCTGTTAAAGAGATACCGGATTCCACCTAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515424.5
CDS CAA 72 bp GAGGAAGACCACTTGTGCTTGATCTGCACATTATCGTaGATGACTGGGATATTTCTGATGAGAAACCCTGCA +
Preference number: 6 (lower is better)
Translates to: EEDHLCLICTLS*MTGIFLMRNPA
Trigger: TGCAGGGTTTCTCATCAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS CAA 90 bp ACCAGAATGATAGACAGGGCTATGCTTCTCAAAGAGGAAGACCACTaGTGCTTGATCTGCACATTATCGTTGATGACTGGGATATTTCTG +
Preference number: 6 (lower is better)
Translates to: TRMIDRAMLLKEEDH*CLICTLSLMTGIFL
Trigger: CAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAGCATAGCCCTGTCTATCATTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS GCA 72 bp CACCATCAGAAATGTAGTCAAAATTCGTATCAATACTaGAATGCCTACGGTGGCAACACAAAGGCCTACAGT +
Preference number: 6 (lower is better)
Translates to: HHQKCSQNSYQY*NAYGGNTKAYS
Trigger: ACTGTAGGCCTTTGTGTTGCCACCGTAGGCATTGCAGTATTGATACGAATTTTGACTACATTTCTGATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503230.5
CDS CAA 72 bp AGGGCTATGCTTCTCAAAGAGGAAGACCACTTGTGCTaGATCTGCACATTATCGTTGATGACTGGGATATTT +
Preference number: 6 (lower is better)
Translates to: RAMLLKEEDHLC*ICTLSLMTGIF
Trigger: AAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAGCATAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS CAA 90 bp ATGATAGACAGGGCTATGCTTCTCAAAGAGGAAGACCACTTGTGCTaGATCTGCACATTATCGTTGATGACTGGGATATTTCTGATGAGA +
Preference number: 6 (lower is better)
Translates to: MIDRAMLLKEEDHLC*ICTLSLMTGIFLMR
Trigger: TCTCATCAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAGCATAGCCCTGTCTATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5
CDS GCA 72 bp ATGCTTCTCAAAGAGGAAGACCACTTGTGCTTGATCTaGACATTATCGTTGATGACTGGGATATTTCTGATG +
Preference number: 6 (lower is better)
Translates to: MLLKEEDHLCLI*TLSLMTGIFLM
Trigger: CATCAGAAATATCCCAGTCATCAACGATAATGTGCAGATCAAGCACAAGTGGTCTTCCTCTTTGAGAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362026.7
ENST00000394785.9
ENST00000503103.5
ENST00000503230.5
ENST00000506288.5
ENST00000515424.5