RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC9A8 (Homo sapiens)

Ensembl gene IDs: ENSG00000197818

Ensembl transcript IDs: ENST00000361573.3, ENST00000417961.5, ENST00000489787.1, ENST00000490250.1

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGGCCCACTGCTCACCAGCACTTCGCGCTCACTCCGAAGCCAGTaGAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCA +
Preference number: 1 (lower is better)
Translates to: TGPLLTSTSRSLRSQ*SPRRAAGETNSRAP
Trigger: TGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTTCACTGGCTTCGGAGTGAGCGCGAAGTGCTGGTGAGCAGTGGGCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp GCTGCTGGATGCACGCATCTCTGCGAGGCCCCTGCTGAGTGTCTGTaGGCAGCAAACGCCCATCCTGGGCCTGCCTGCCTGAAGCCTTGG +
Preference number: 1 (lower is better)
Translates to: AAGCTHLCEAPAECL*AANAHPGPACLKPW
Trigger: CCAAGGCTTCAGGCAGGCAGGCCCAGGATGGGCGTTTGCTGCGCACAGACACTCAGCAGGGGCCTCGCAGAGATGCGTGCATCCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp CTGGCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTaGGGGAACACGGACCTGAGACTTCATGAGGCCAAGCCCTGCCGA +
Preference number: 1 (lower is better)
Translates to: LASATLLRTLQACAP*GNTDLRLHEAKPCR
Trigger: TCGGCAGGGCTTGGCCTCATGAAGTCTCAGGTCCGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp GGCAGAAGAGGCTCAGAGGAGATCGAGGCAGGTGCTGGTACCTCCTaGGAACGGTCCCGCCACCCCCTTTGCCCCCAACAAATCCTGGGG +
Preference number: 1 (lower is better)
Translates to: GRRGSEEIEAGAGTS*ERSRHPLCPQQILG
Trigger: CCCCAGGATTTGTTGGGGGCAAAGGGGGTGGCGGGACCGTTCCCAGGAGGTACCAGCACCTGCCTCGATCTCCTCTGAGCCTCTTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp GAGGACCCGGGGCTGTGGAGATGCCTTCCCGAGGACTCTGCTTCATaGCTCCGCATCAGGAAGCTCAGGGTTTCCTACCCGCCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: EDPGLWRCLPEDSAS*LRIRKLRVSYPPPA
Trigger: TGCTGGGGGCGGGTAGGAAACCCTGAGCTTCCTGATGCGGAGTCATGAAGCAGAGTCCTCGGGAAGGCATCTCCACAGCCCCGGGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp CGGGCCTGGCCTCTCATTCCTGGCACAGAGGAACCTGGAAGGTCCTaGGGTCAGTCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: RAWPLIPGTEEPGRS*GQSLLTSGATLPEV
Trigger: CACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTCCTCTGTGCCAGGAATGAGAGGCCAGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp CCCGCCCTCTTATGTCTTGAAGGGGCTGCTGGATGCACGCATCTCTaGGAGGCCCCTGCTGAGTGTCTGTGCGCAGCAAACGCCCATCCT +
Preference number: 1 (lower is better)
Translates to: PALLCLEGAAGCTHL*EAPAECLCAANAHP
Trigger: AGGATGGGCGTTTGCTGCGCACAGACACTCAGCAGGGGCCTCGCAGAGATGCGTGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp AGTGAGTTCTGGCAGGGGTGCGAGAACAATCTGGTCTCAGATCCCTaGCCGCACTCGCCCAGGGGCAGGCAAAGGTCCCTACCCTCTGAC +
Preference number: 1 (lower is better)
Translates to: SEFWQGCENNLVSDP*PHSPRGRQRSLPSD
Trigger: GTCAGAGGGTAGGGACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTCTCGCACCCCTGCCAGAACTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp CAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTaGCACAGAGGAACCTGGAAGGTCCTGAGGTCAGTCCCTCCTGAC +
Preference number: 1 (lower is better)
Translates to: QGQGEVVGSGLASHS*HRGTWKVLRSVPPD
Trigger: GTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTCCTCTGTGCCAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp GAATTGTGGCTGCAGAGGCATCTTGATGACTCAAAGGCAGGTGGCTaGCCCCTGGCTCTGCCAGTCCGGCGGGGGCAGCATGAAGGCAGT +
Preference number: 1 (lower is better)
Translates to: ELWLQRHLDDSKAGG*PLALPVRRGQHEGS
Trigger: ACTGCCTTCATGCTGCCCCCGCCGGACTGGCAGAGCCAGGGGTCAGCCACCTGCCTTTGAGTCATCAAGATGCCTCTGCAGCCACAATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp GGTAGGGGCCGAGAGGGCTTCAGTTCTGCCTCTGGACAGTGTGTCTaGCCTCCAGATGATGGAACTGAGCCACCCTTAGCCTGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: GRGREGFSSASGQCV*PPDDGTEPPLAWPW
Trigger: CCAGGGCCAGGCTAAGGGTGGCTCAGTTCCATCATCTGGAGGTCAGACACACTGTCCAGAGGCAGAACTGAAGCCCTCTCGGCCCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp TTAGACAGAGGACCCGGGGCTGTGGAGATGCCTTCCCGAGGACTCTaGTTCATGACTCCGCATCAGGAAGCTCAGGGTTTCCTACCCGCC +
Preference number: 1 (lower is better)
Translates to: LDRGPGAVEMPSRGL*FMTPHQEAQGFLPA
Trigger: GGCGGGTAGGAAACCCTGAGCTTCCTGATGCGGAGTCATGAAGCAGAGTCCTCGGGAAGGCATCTCCACAGCCCCGGGTCCTCTGTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp ACAGTTTCCCAAGAAGTCGCCTGGCTCCAGAGGCCTGTCAGGTTCTaGACTAAGGCGACTCTGCAGCCAGTACCTCGCCCCGCCCTCTTA +
Preference number: 1 (lower is better)
Translates to: TVSQEVAWLQRPVRF*TKATLQPVPRPALL
Trigger: TAAGAGGGCGGGGCGAGGTACTGGCTGCAGAGTCGCCTTAGTCCAGAACCTGACAGGCCTCTGGAGCCAGGCGACTTCTTGGGAAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp GGCTCAGGGAGGAGTCGGGAGATGACAGTTTCCCAAGAAGTCGCCTaGCTCCAGAGGCCTGTCAGGTTCTGGACTAAGGCGACTCTGCAG +
Preference number: 1 (lower is better)
Translates to: GSGRSREMTVSQEVA*LQRPVRFWTKATLQ
Trigger: CTGCAGAGTCGCCTTAGTCCAGAACCTGACAGGCCTCTGGAGCCAGGCGACTTCTTGGGAAACTGTCATCTCCCGACTCCTCCCTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp GTGGTAGGATCGGGCCTGGCCTCTCATTCCTGGCACAGAGGAACCTaGAAGGTCCTGAGGTCAGTCCCTCCTGACATCTGGAGCCACACT +
Preference number: 1 (lower is better)
Translates to: VVGSGLASHSWHRGT*KVLRSVPPDIWSHT
Trigger: AGTGTGGCTCCAGATGTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTCCTCTGTGCCAGGAATGAGAGGCCAGGCCCGATCCTACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp CTTTTGACCACGGATGCACATCTTCCCATCCAATCACAGGCCCACTaGTCACCAGCACTTCGCGCTCACTCCGAAGCCAGTGAAGCCCCC +
Preference number: 1 (lower is better)
Translates to: LLTTDAHLPIQSQAH*SPALRAHSEASEAP
Trigger: GGGGGCTTCACTGGCTTCGGAGTGAGCGCGAAGTGCTGGTGAGCAGTGGGCCTGTGATTGGATGGGAAGATGTGCATCCGTGGTCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp GAGGCTCTGGTTCCGCAGGGCTGGCAGCTGACTTTTGACCACGGATaGACATCTTCCCATCCAATCACAGGCCCACTGCTCACCAGCACT +
Preference number: 1 (lower is better)
Translates to: EALVPQGWQLTFDHG*TSSHPITGPLLTST
Trigger: AGTGCTGGTGAGCAGTGGGCCTGTGATTGGATGGGAAGATGTGCATCCGTGGTCAAAAGTCAGCTGCCAGCCCTGCGGAACCAGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp TCTTTCAGCATTCCATGGCACACAAAGGAATCCTGTGGGCTAACCTaGGCGACTCTGGCGCTCAGGCCTACCCCTTGGCCTCATGCCAGC +
Preference number: 1 (lower is better)
Translates to: SFSIPWHTKESCGLT*ATLALRPTPWPHAS
Trigger: GCTGGCATGAGGCCAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTTGTGTGCCATGGAATGCTGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp CAGTCACCCATCTTTCAGCATTCCATGGCACACAAAGGAATCCTGTaGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGCC +
Preference number: 1 (lower is better)
Translates to: QSPIFQHSMAHKGIL*ANLGDSGAQAYPLA
Trigger: GGCCAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTTGTGTGCCATGGAATGCTGAAAGATGGGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp AAGGTCCTGAGGTCAGTCCCTCCTGACATCTGGAGCCACACTGCCTaGGGTGGAAGAGATGGAGATGTGCTTGCTCTAGCCCAGGGTCCA +
Preference number: 1 (lower is better)
Translates to: KVLRSVPPDIWSHTA*GGRDGDVLALAQGP
Trigger: TGGACCCTGGGCTAGAGCAAGCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGACTGACCTCAGGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp TTCCTGGCACAGAGGAACCTGGAAGGTCCTGAGGTCAGTCCCTCCTaGCATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGT +
Preference number: 1 (lower is better)
Translates to: FLAQRNLEGPEVSPS*HLEPHCLRWKRWRC
Trigger: ACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTCCTCTGTGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp TCTCCAAGCATGTGCGCCCTGCGGGAACACGGACCTGAGACTTCATaGGGCCAAGCCCTGCCGATGGCACCTTTGCCAAAGGTTTTAAGA +
Preference number: 1 (lower is better)
Translates to: SPSMCALREHGPETS*GQALPMAPLPKVLR
Trigger: TCTTAAAACCTTTGGCAAAGGTGCCATCGGCAGGGCTTGGCCTCATGAAGTCTCAGGTCCGTGTTCCCGCAGGGCGCACATGCTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp CTGTTCATACATCTATTCCTGACTCCCTTAAAGAGTCCAACGAGATaGCGCAGGGGCTCCTGCATGGCAGCCACAGGTCCCCCATCTCTG +
Preference number: 1 (lower is better)
Translates to: LFIHLFLTPLKSPTR*RRGSCMAATGPPSL
Trigger: CAGAGATGGGGGACCTGTGGCTGCCATGCAGGAGCCCCTGCGTCATCTCGTTGGACTCTTTAAGGGAGTCAGGAATAGATGTATGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp TTCCAAGGCTCCCTGGGACCCAGAACCACATACGGAAGTTGGCAATaGCTCTTTGATGAGCTGAGCAGTTTGAGGCTCGTCAAAGGGGAG +
Preference number: 1 (lower is better)
Translates to: FQGSLGPRTTYGSWQ*LFDELSSLRLVKGE
Trigger: CTCCCCTTTGACGAGCCTCAAACTGCTCAGCTCATCAAAGAGCCATTGCCAACTTCCGTATGTGGTTCTGGGTCCCAGGGAGCCTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp GCCAGGTTCCAAGGCTCCCTGGGACCCAGAACCACATACGGAAGTTaGCAATGGCTCTTTGATGAGCTGAGCAGTTTGAGGCTCGTCAAA +
Preference number: 1 (lower is better)
Translates to: ARFQGSLGPRTTYGS*QWLFDELSSLRLVK
Trigger: TTTGACGAGCCTCAAACTGCTCAGCTCATCAAAGAGCCATTGCCAACTTCCGTATGTGGTTCTGGGTCCCAGGGAGCCTTGGAACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp AGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGTAAAATaGAAATCAAGACAGCAGTTGTGGGCCGGCAGAAACCCTGTGCCT +
Preference number: 1 (lower is better)
Translates to: RWQEATRGSQHFAVK*KSRQQLWAGRNPVP
Trigger: AGGCACAGGGTTTCTGCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp AAGGTTTTAAGAAGGGTCCCCAGTCACCCATCTTTCAGCATTCCATaGCACACAAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCG +
Preference number: 1 (lower is better)
Translates to: KVLRRVPSHPSFSIP*HTKESCGLTWATLA
Trigger: CGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTTGTGTGCCATGGAATGCTGAAAGATGGGTGACTGGGGACCCTTCTTAAAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp AACAACTTACATCTGGGAGATGGGACCCTAAACTTCAGGGGAGAGTaGGTTCTGGCAGGGGTGCGAGAACAATCTGGTCTCAGATCCCTG +
Preference number: 1 (lower is better)
Translates to: NNLHLGDGTLNFRGE*VLAGVREQSGLRSL
Trigger: CAGGGATCTGAGACCAGATTGTTCTCGCACCCCTGCCAGAACTCACTCTCCCCTGAAGTTTAGGGTCCCATCTCCCAGATGTAAGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp CAAGCCACGGGGTGGTTGTTCCGAGGGGTCATAACAACTACAGGCTaGAGAAAGCATGGGATTCATTCCAAGAACTCGTTCCACACAGCA +
Preference number: 1 (lower is better)
Translates to: QATGWLFRGVITTTG*RKHGIHSKNSFHTA
Trigger: TGCTGTGTGGAACGAGTTCTTGGAATGAATCCCATGCTTTCTGCAGCCTGTAGTTGTTATGACCCCTCGGAACAACCACCCCGTGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp GCACAGGAAGTATCACAAAAGGCAGCGGGAGGTTTTCAGGATTTCTaGGCCCTGCCACTTAGGTCAGAATTGTGGCTGCAGAGGCATCTT +
Preference number: 1 (lower is better)
Translates to: AQEVSQKAAGGFQDF*ALPLRSELWLQRHL
Trigger: AAGATGCCTCTGCAGCCACAATTCTGACCTAAGTGGCAGGGCCCAGAAATCCTGAAAACCTCCCGCTGCCTTTTGTGATACTTCCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTaGGCCGGCAGAAACCCTGTGCCTCTAGCTTTTCCCTCTAGAGGG +
Preference number: 1 (lower is better)
Translates to: GSQHFAVKCKSRQQL*AGRNPVPLAFPSRG
Trigger: CCCTCTAGAGGGAAAAGCTAGAGGCACAGGGTTTCTGCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp AATGATGAATTAAACCACCCCAGGGTGCCAGGTTCCAAGGCTCCCTaGGACCCAGAACCACATACGGAAGTTGGCAATGGCTCTTTGATG +
Preference number: 1 (lower is better)
Translates to: NDELNHPRVPGSKAP*DPEPHTEVGNGSLM
Trigger: CATCAAAGAGCCATTGCCAACTTCCGTATGTGGTTCTGGGTCCCAGGGAGCCTTGGAACCTGGCACCCTGGGGTGGTTTAATTCATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp GTGGTTGTTCCGAGGGGTCATAACAACTACAGGCTGCAGAAAGCATaGGATTCATTCCAAGAACTCGTTCCACACAGCAGTGCCTGTGGT +
Preference number: 1 (lower is better)
Translates to: VVVPRGHNNYRLQKA*DSFQELVPHSSACG
Trigger: ACCACAGGCACTGCTGTGTGGAACGAGTTCTTGGAATGAATCCCATGCTTTCTGCAGCCTGTAGTTGTTATGACCCCTCGGAACAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp ATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCAAAGCCTTTaGTGTAAGCCAGGCCATGCCCACCATGCAGGTGGAAGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: IQDLQILTWRNRQSL*CKPGHAHHAGGSRE
Trigger: CTCCCTGCTTCCACCTGCATGGTGGGCATGGCCTGGCTTACACCAAAGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 90 bp AAGTATCACAAAAGGCAGCGGGAGGTTTTCAGGATTTCTGGGCCCTaGCACTTAGGTCAGAATTGTGGCTGCAGAGGCATCTTGATGACT +
Preference number: 1 (lower is better)
Translates to: KYHKRQREVFRISGP*HLGQNCGCRGILMT
Trigger: AGTCATCAAGATGCCTCTGCAGCCACAATTCTGACCTAAGTGGCAGGGCCCAGAAATCCTGAAAACCTCCCGCTGCCTTTTGTGATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 90 bp AGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTaGAGAAACCGTCAAAGCCTTTGGTGTAAGCCAGGCCATGCCCAC +
Preference number: 1 (lower is better)
Translates to: SFVILRTIQDLQILT*RNRQSLWCKPGHAH
Trigger: GTGGGCATGGCCTGGCTTACACCAAAGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 90 bp GTAAGATTCACATCCATCTTGAGGACAATTCAAGCTTCGTCATTTTaGGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTC +
Preference number: 1 (lower is better)
Translates to: VRFTSILRTIQASSF*GRFKICRSLLGETV
Trigger: GACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGAATTGTCCTCAAGATGGATGTGAATCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCCCGGCGGGGGCAGCATaGAGGCAGTGGCTGGGGAAT +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSPAGAA*RQWLGN
Trigger: ATTCCCCAGCCACTGCCTTCATGCTGCCCCCGCCGG...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCTGTGCGTGGAGCGTGTaGTCCAGGATGCTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSCAWSV*SRMLGP
Trigger: GGGCCCCAGCATCCTGGAGCACACGCTCCACGCACA...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCTGGTCTCAGATCCCTaGCCGCACTCGCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: ASATLLRTLQACAPCGNTLVSDP*PHSPRG
Trigger: GCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCTCCTGTGGGCTAACCTaGGCGACTCTGGCGCTCAGG +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSSCGLT*ATLALR
Trigger: CCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGA...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGTCCCGCCACCCCCTTTaGCCCCAACAAATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: ASATLLRTLQACAPCGNTSRHPL*PQQILG
Trigger: CCCCAGGATTTGTTGGGGGCAAAGGGGGTGGCGGGA...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGGAGATCGAGGCAGGTaGTGGTACCTCCTGGGAACG +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSGDRGR*WYLLGT
Trigger: CGTTCCCAGGAGGTACCAGCACCTGCCTCGATCTCC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCCAAGCATGTGCGCCCTaGGGGAACACGGACCTGAGA +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSQACAP*GNTDLR
Trigger: TCTCAGGTCCGTGTTCCCGCAGGGCGCACATGCTTG...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGAACCTGGAAGGTCCTaGGGTCAGTCCCTCCTGACA +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSEPGRS*GQSLLT
Trigger: TGTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTGCTGCTCTGGCCCCTaGCCCAGTGCTTTGGGGACC +
Preference number: 2 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPCCSGP*PSALGT
Trigger: GGTCCCCAAAGCACTGGGGCAGGGGCCAGAGCAGCA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCCATGAGGCCAAGCCCTaGCGATGGCACCTTTGCCAA +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSHEAKP*RWHLCQ
Trigger: TTGGCAAAGGTGCCATCGGCAGGGCTTGGCCTCATG...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGGTGCTGGTACCTCCTaGGAACGGTCCCGCCACCCC +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLGAGTS*ERSRHP
Trigger: GGGGTGGCGGGACCGTTCCCAGGAGGTACCAGCACC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGGCTGAGGAGCCACACTaGGCGGAGGCTGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLAEEPH*AEAGSG
Trigger: CCCTGAGCCAGCCTCCGCTCAGTGTGGCTCCTCAGC...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGTGTGCGTGGAGCGTGTaGTCCAGGATGCTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLCAWSV*SRMLGP
Trigger: GGGCCCCAGCATCCTGGAGCACACGCTCCACGCACA...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCTGGCACAACTGTAGATaGTGCTCCTCTAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSWHNCR*CSSRQG
Trigger: CCCCTGCCTAGAGGAGCACCATCTACAGTTGTGCCA...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCAAGGGCAGCAAACACTaGCTCTCACTCGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSKGSKH*LSLGRE
Trigger: TTCCCTGCCGAGTGAGAGCCAGTGTTTGCTGCCCTT...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCCCGGCGGGGGCAGCATaGAGGCAGTGGCTGGGGAAT +
Preference number: 2 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCPAGAA*RQWLGN
Trigger: ATTCCCCAGCCACTGCCTTCATGCTGCCCCCGCCGG...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCTCGTCAAAGGGGAGATaGGGAGAGGATGGGAGTCAT +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSSSKGR*GEDGSH
Trigger: ATGACTCCCATCCTCTCCTCATCTCCCCTTTGACGA...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGGAAGGGGCTGCTGGATaGACGCATCTCTGCGAGGCC +
Preference number: 2 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLEGAAG*THLCEA
Trigger: GGCCTCGCAGAGATGCGTGCATCCAGCAGCCCCTTC...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGAGTTCTGGCAGGGGTaGGAGAACAATCTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSEFWQG*ENNLVS
Trigger: TGAGACCAGATTGTTCTCGCACCCCTGCCAGAACTC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGCGTTCCACACAGCAGTaGCTGTGGTGGAGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLRSTQQ*LWWRGC
Trigger: GCAGCCCCTCCACCACAGGCACTGCTGTGTGGAACG...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGGGAGGGAGATCAGATaGCAGGAGGCGACTAGAGGC +
Preference number: 2 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVGREIR*QEATRG
Trigger: GCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGGCTATCACACCTGGTaGCGAGGGGGCAGACGGAAA +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLGYHTW*RGGRRK
Trigger: TTTCCGTCTGCCCCCTCGTCACCAGGTGTGATAGCC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCAGCCTTCACTCATCCTaGAGTATTCCTCCTACACGC +
Preference number: 2 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSSLHSS*SIPPTR
Trigger: GCGTGTAGGAGGAATACTTCAGGATGAGTGAAGGCT...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGAGATGGAGATGTGCTTaGTCTAGCCCAGGGTCCATG +
Preference number: 2 (lower is better)
Translates to: ASATLLRTLQACAPCGNTRWRCA*SSPGSM
Trigger: CATGGACCCTGGGCTAGAGCAAGCACATCTCCATCT...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCTGGTCTCAGATCCCTaGCCGCACTCGCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGLVSDP*PHSPRG
Trigger: GCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCAGCTTCACAGATGACTaGCACCTGGCCCCATGCTCC +
Preference number: 2 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVSFTDD*HLAPCS
Trigger: GGAGCATGGGGCCAGGTGCCAGTCATCTGTGAAGCT...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGTGGGGTGTGTGTGCGTaGAGCGTGTGCTCCAGGATG +
Preference number: 2 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLWGVCA*SVCSRM
Trigger: CATCCTGGAGCACACGCTCCACGCACACACACCCCA...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGAGGCCAGGTGTGACCTaGCTGGGGCTATCACACCTG +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLRPGVT*LGLSHL
Trigger: CAGGTGTGATAGCCCCAGCCAGGTCACACCTGGCCT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGAGGAGTCGGGAGATaGCAGTTTCCCAAGAAGTCG +
Preference number: 2 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPGGVGR*QFPKKS
Trigger: CGACTTCTTGGGAAACTGTCATCTCCCGACTCCTCC...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGCTGTGGTGGAGGGGCTaGTGGCTAAAGGGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLLWWRG*WLKGWF
Trigger: AAACCAGCCCTTTAGCCAGCAGCCCCTCCACCACAG...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTAGGCCTGTCAGGTTCTaGACTAAGGCGACTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPRPVRF*TKATLQ
Trigger: CTGCAGAGTCGCCTTAGTCCAGAACCTGACAGGCCT...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGGTTCCAAGGCTCCCTaGGACCCAGAACCACATACG +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLGSKAP*DPEPHT
Trigger: CGTATGTGGTTCTGGGTCCCAGGGAGCCTTGGAACC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCTGAGGTGGAAGAGATaGAGATGTGCTTGCTCTAGC +
Preference number: 2 (lower is better)
Translates to: ASATLLRTLQACAPCGNTLRWKR*RCACSS
Trigger: GCTAGAGCAAGCACATCTCCATCTCTTCCACCTCAG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCATTCCATCTGGACATaGCTGGCAGCTCCTCACCCT +
Preference number: 2 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLHSIWT*LAAPHP
Trigger: AGGGTGAGGAGCTGCCAGTCATGTCCAGATGGAATG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCGGATGCACGCATCTCTaGGAGGCCCCTGCTGAGTGT +
Preference number: 2 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCGCTHL*EAPAEC
Trigger: ACACTCAGCAGGGGCCTCGCAGAGATGCGTGCATCC...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCTCCCAAGAAGTCGCCTaGCTCCAGAGGCCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCSQEVA*LQRPVR
Trigger: CCTGACAGGCCTCTGGAGCCAGGCGACTTCTTGGGA...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGTGGCACAACTGTAGATaGTGCTCCTCTAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLWHNCR*CSSRQG
Trigger: CCCCTGCCTAGAGGAGCACCATCTACAGTTGTGCCA...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCTGGGGTGTGTGTGCGTaGAGCGTGTGCTCCAGGATG +
Preference number: 2 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCWGVCA*SVCSRM
Trigger: CATCCTGGAGCACACGCTCCACGCACACACACCCCA...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAAGAGGATGGAACCCTaGCTAGCAGCGAAGATGGCA +
Preference number: 2 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLKRMEP*LAAKMA
Trigger: TGCCATCTTCGCTGCTAGTCAGGGTTCCATCCTCTT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGGACTAAGGCGACTCTaGAGCCAGTACCTCGCCCCG +
Preference number: 2 (lower is better)
Translates to: ATASFSSLSSKCEARCDLGLRRL*SQYLAP
Trigger: CGGGGCGAGGTACTGGCTGCAGAGTCGCCTTAGTCC...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGAGCAAACGCCCATCCTaGGCCTGCCTGCCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: ATASFSSLSSKCEARCDLSKRPS*ACLPEA
Trigger: GGCTTCAGGCAGGCAGGCCCAGGATGGGCGTTTGCT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGACACTGAGCGGAGGCTaGCTCAGGGAGGAGTCGGGA +
Preference number: 2 (lower is better)
Translates to: ATASFSSLSSKCEARCDLTLSGG*LREESG
Trigger: TCCCGACTCCTCCCTGAGCCAGCCTCCGCTCAGTGT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGCAGATGACTGGCACCTaGCCCCATGCTCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: ATASFSSLSSKCEARCDLQMTGT*PHAPSP
Trigger: AGGGGAGGGAGCATGGGGCCAGGTGCCAGTCATCTG...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGAGATGAGGAGAGGATaGGAGTCATTCCATCTGGAC +
Preference number: 2 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPEMRRG*ESFHLD
Trigger: GTCCAGATGGAATGACTCCCATCCTCTCCTCATCTC...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCGCCCTCTTATGTCTTaGAGGGGCTGCTGGATGCAC +
Preference number: 2 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGRPLMS*RGCWMH
Trigger: GTGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTAGACAAAAGAACAACTaGGTACGGGAATGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPRQKNN*VREWWG
Trigger: TCCCCACCATTCCCGTACTCAGTTGTTCTTTTGTCT...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGACCTGCTGAGTGTCTGTaGGCAGCAAACGCCCATCCT +
Preference number: 2 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRPAECL*AANAHP
Trigger: AGGATGGGCGTTTGCTGCGCACAGACACTCAGCAGG...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCAGGATTTCTGGGCCCTaGCACTTAGGTCAGAATTGT +
Preference number: 2 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVRISGP*HLGQNC
Trigger: ACAATTCTGACCTAAGTGGCAGGGCCCAGAAATCCT...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGGTTTTCAGGATTTCTaGGCCCTGCCACTTAGGTCA +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLGFQDF*ALPLRS
Trigger: TGACCTAAGTGGCAGGGCCCAGAAATCCTGAAAACC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGAGATGAGGAGAGGATaGGAGTCATTCCATCTGGAC +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLEMRRG*ESFHLD
Trigger: GTCCAGATGGAATGACTCCCATCCTCTCCTCATCTC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCTCGTCAAAGGGGAGATaGGGAGAGGATGGGAGTCAT +
Preference number: 2 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCSSKGR*GEDGSH
Trigger: ATGACTCCCATCCTCTCCTCATCTCCCCTTTGACGA...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCGTTCCACACAGCAGTaGCTGTGGTGGAGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKRSTQQ*LWWRGC
Trigger: GCAGCCCCTCCACCACAGGCACTGCTGTGTGGAACG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGCAGTGGCTGGGGAATaGCACAACTGTAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGAVAGE*HNCRWC
Trigger: GCACCATCTACAGTTGTGCCATTCCCCAGCCACTGC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCAGGTGGCTGACCCCTaGCTCTGCCAGTCCGGCGGG +
Preference number: 2 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWQVADP*LCQSGG
Trigger: CCCGCCGGACTGGCAGAGCCAGGGGTCAGCCACCTG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCCTTAGGTCAGAATTGTaGCTGCAGAGGCATCTTGAT +
Preference number: 2 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVLRSEL*LQRHLD
Trigger: ATCAAGATGCCTCTGCAGCCACAATTCTGACCTAAG...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCAGGGCCTCAGCACAGTaGCCTCCGATTAGACAAAAG +
Preference number: 2 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCRASAQ*PPIRQK
Trigger: CTTTTGTCTAATCGGAGGCCACTGTGCTGAGGCCCT...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCCATCTGGACATGACTaGCAGCTCCTCACCCTGAGA +
Preference number: 2 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGPSGHD*QLLTLR
Trigger: TCTCAGGGTGAGGAGCTGCCAGTCATGTCCAGATGG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGGGGAGAGTGAGTTCTaGCAGGGGTGCGAGAACAAT +
Preference number: 2 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGGESEF*QGCENN
Trigger: ATTGTTCTCGCACCCCTGCCAGAACTCACTCTCCCC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGCTGCTGACCTCACCTaGCCGACAGGGGGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKAADLT*PTGGRR
Trigger: TCTTCTGCCCCCTGTCGGCCAGGTGAGGTCAGCAGC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGACACTCCGTTTCTCTCTaGGGGAGCACAGGAAGTATC +
Preference number: 2 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRHSVSL*GSTGSI
Trigger: GATACTTCCTGTGCTCCCTCAGAGAGAAACGGAGTG...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGCGGGAACACGGACCTaGGACTTCATGAGGCCAAGC +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKAGTRT*DFMRPS
Trigger: GCTTGGCCTCATGAAGTCTCAGGTCCGTGTTCCCGC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGCTTAGGTCAGAATTGTaGCTGCAGAGGCATCTTGAT +
Preference number: 2 (lower is better)
Translates to: KGILWANLGDSGAQAYPLLRSEL*LQRHLD
Trigger: ATCAAGATGCCTCTGCAGCCACAATTCTGACCTAAG...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCGCCCTCTTATGTCTTaGAGGGGCTGCTGGATGCAC +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKRPLMS*RGCWMH
Trigger: GTGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCAGGCCTGTCAGGTTCTaGACTAAGGCGACTCTGCAG +
Preference number: 2 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGRPVRF*TKATLQ
Trigger: CTGCAGAGTCGCCTTAGTCCAGAACCTGACAGGCCT...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCAGGTGGCTGACCCCTaGCTCTGCCAGTCCGGCGGG +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRQVADP*LCQSGG
Trigger: CCCGCCGGACTGGCAGAGCCAGGGGTCAGCCACCTG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGTTGGGGACCCTAGCATaGGTGACGAATGGGATCCAA +
Preference number: 2 (lower is better)
Translates to: ATASFSSLSSKCEARCDLLGTLA*VTNGIQ
Trigger: TTGGATCCCATTCGTCACCCATGCTAGGGTCCCCAA...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGGTCAGAATTGTGGCTaGAGAGGCATCTTGATGACT +
Preference number: 2 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGGQNCG*RGILMT
Trigger: AGTCATCAAGATGCCTCTGCAGCCACAATTCTGACC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCCTTCCCGAGGACTCTaGTTCATGACTCCGCATCAG +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKPSRGL*FMTPHQ
Trigger: CTGATGCGGAGTCATGAAGCAGAGTCCTCGGGAAGG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGCTGAGGTGGAAGAGATaGAGATGTGCTTGCTCTAGC +
Preference number: 2 (lower is better)
Translates to: ATASFSSLSSKCEARCDLLRWKR*RCACSS
Trigger: GCTAGAGCAAGCACATCTCCATCTCTTCCACCTCAG...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCTGGCCTCTCATTCCTaGCACAGAGGAACCTGGAAG +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKLASHS*HRGTWK
Trigger: CTTCCAGGTTCCTCTGTGCCAGGAATGAGAGGCCAG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGGGGAGAGTGAGTTCTaGCAGGGGTGCGAGAACAAT +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKGESEF*QGCENN
Trigger: ATTGTTCTCGCACCCCTGCCAGAACTCACTCTCCCC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 90 bp ACCACATACGGAAGTTGGCAATGGCTCTTTGATGAGCTGAGCAGTTaGAGGCTCGTCAAAGGGGAGATGAGGAGAGGATGGGAGTCATTC +
Preference number: 2 (lower is better)
Translates to: TTYGSWQWLFDELSS*RLVKGEMRRGWESF
Trigger: GAATGACTCCCATCCTCTCCTCATCTCCCCTTTGACGAGCCTCAAACTGCTCAGCTCATCAAAGAGCCATTGCCAACTTCCGTATGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGAGACAAAAGAACAACTaGGTACGGGAATGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: ATASFSSLSSKCEARCDLRQKNN*VREWWG
Trigger: TCCCCACCATTCCCGTACTCAGTTGTTCTTTTGTCT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGACCACATACGGAAGTTaGCAATGGCTCTTTGATGAG +
Preference number: 2 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGTTYGS*QWLFDE
Trigger: CTCATCAAAGAGCCATTGCCAACTTCCGTATGTGGT...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCCACACTGCCTGAGGTaGAAGAGATGGAGATGTGCT +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKPHCLR*KRWRCA
Trigger: AGCACATCTCCATCTCTTCCACCTCAGGCAGTGTGG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCTTCAGTTCTGCCTCTaGACAGTGTGTCTGACCTCC +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKLQFCL*TVCLTS
Trigger: GGAGGTCAGACACACTGTCCAGAGGCAGAACTGAAG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTGAGGACCCGGGGCTGTaGAGATGCCTTCCCGAGGAC +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNREDPGL*RCLPED
Trigger: GTCCTCGGGAAGGCATCTCCACAGCCCCGGGTCCTC...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 90 bp AGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTaGTGGGCCGGCAGAAACCCTGTGCCTCTAGCTTTTCCCTCTAGA +
Preference number: 2 (lower is better)
Translates to: RGSQHFAVKCKSRQQ*WAGRNPVPLAFPSR
Trigger: TCTAGAGGGAAAAGCTAGAGGCACAGGGTTTCTGCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCCTGCTGAGTGTCTGTaGGCAGCAAACGCCCATCCT +
Preference number: 2 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWPAECL*AANAHP
Trigger: AGGATGGGCGTTTGCTGCGCACAGACACTCAGCAGG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGATCCCGCCACCCCCTTTaGCCCCAACAAATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRSRHPL*PQQILG
Trigger: CCCCAGGATTTGTTGGGGGCAAAGGGGGTGGCGGGA...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTAGCAAACGCCCATCCTaGGCCTGCCTGCCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRSKRPS*ACLPEA
Trigger: GGCTTCAGGCAGGCAGGCCCAGGATGGGCGTTTGCT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAACACTGAGCGGAGGCTaGCTCAGGGAGGAGTCGGGA +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRTLSGG*LREESG
Trigger: TCCCGACTCCTCCCTGAGCCAGCCTCCGCTCAGTGT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCAGATGACTGGCACCTaGCCCCATGCTCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRQMTGT*PHAPSP
Trigger: AGGGGAGGGAGCATGGGGCCAGGTGCCAGTCATCTG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGAGCTTCACAGATGACTaGCACCTGGCCCCATGCTCC +
Preference number: 2 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWSFTDD*HLAPCS
Trigger: GGAGCATGGGGCCAGGTGCCAGTCATCTGTGAAGCT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCTTACATCTGGGAGATaGGACCCTAAACTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKLTSGR*DPKLQG
Trigger: CCCCTGAAGTTTAGGGTCCCATCTCCCAGATGTAAG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAGCTGCTGACCTCACCTaGCCGACAGGGGGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRAADLT*PTGGRR
Trigger: TCTTCTGCCCCCTGTCGGCCAGGTGAGGTCAGCAGC...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGGAGGAGTCGGGAGATaGCAGTTTCCCAAGAAGTCG +
Preference number: 2 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWGGVGR*QFPKKS
Trigger: CGACTTCTTGGGAAACTGTCATCTCCCGACTCCTCC...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCGAAGATGGCAGCAGTaGGCAGACACTGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRRRWQQ*ADTAGP
Trigger: AGGCCCTGCAGTGTCTGCTCACTGCTGCCATCTTCG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTTTGGCTGGCCTGCTCTaGCTTCAGGGTCAAGGCGAG +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRLAGLL*LQGQGE
Trigger: CTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAA...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAGGCTATCACACCTGGTaGCGAGGGGGCAGACGGAAA +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRGYHTW*RGGRRK
Trigger: TTTCCGTCTGCCCCCTCGTCACCAGGTGTGATAGCC...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACCAGCTCACCCACTGTaGAGAGGGGTGGCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRPAHPL*RGVAGL
Trigger: TAAGCCAGCCACCCCTCTTCACAGTGGGTGAGCTGG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTGGACCTGAGACTTCATaGGGCCAAGCCCTGCCGATG +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRGPETS*GQALPM
Trigger: CATCGGCAGGGCTTGGCCTCATGAAGTCTCAGGTCC...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACCTCGGCTACCCTGCTaGGGACTCTCCAAGCATGTG +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRPRLPC*GLSKHV
Trigger: CACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAGCAGCAAACGGCCACTaGGCTTCTCCCCACACAGGA +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRAANGH*ASPHTG
Trigger: TCCTGTGTGGGGAGAAGCTCAGTGGCCGTTTGCTGC...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGGACTAAGGCGACTCTaGAGCCAGTACCTCGCCCCG +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIGLRRL*SQYLAP
Trigger: CGGGGCGAGGTACTGGCTGCAGAGTCGCCTTAGTCC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAGGAGATCGAGGCAGGTaGTGGTACCTCCTGGGAACG +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRGDRGR*WYLLGT
Trigger: CGTTCCCAGGAGGTACCAGCACCTGCCTCGATCTCC...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAACCCACACCCCAGCCTaGCCCATCCTCAGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRTHTPA*PILSRS
Trigger: ACTTCTGCTGAGGATGGGGCAGGCTGGGGTGTGGGT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCTTTTGTTACCAAGGTaGGCCAAGATTGCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKLLLPR*AKIAKE
Trigger: TTCCTTGGCAATCTTGGCTCACCTTGGTAACAAAAG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGGATGCACGCATCTCTaGGAGGCCCCTGCTGAGTGT +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIGCTHL*EAPAEC
Trigger: ACACTCAGCAGGGGCCTCGCAGAGATGCGTGCATCC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCTGTGGTGGAGGGGCTaGTGGCTAAAGGGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRLWWRG*WLKGWF
Trigger: AAACCAGCCCTTTAGCCAGCAGCCCCTCCACCACAG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGGGAGGGAGATCAGATaGCAGGAGGCGACTAGAGGC +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIGREIR*QEATRG
Trigger: GCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTTGCTTCCTGCTTGGCTaGCCTGCTCTGACTTCAGGG +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRCFLLG*PALTSG
Trigger: CCCTGAAGTCAGAGCAGGCCAGCCAAGCAGGAAGCA...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGAGTTCTCCTGTACCATaGCCTAGACCCAGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKSSPVP*PRPRRK
Trigger: TTTTCTTCTGGGTCTAGGCCATGGTACAGGAGAACT...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTTGCTGGCTAAAGGGCTaGTTTCCTCCAGCGCTCCCT +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRCWLKG*FPPALP
Trigger: AGGGAGCGCTGGAGGAAACCAGCCCTTTAGCCAGCA...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTAAGCAGGAATGCACATaGTCAGCCCAGGGTCCATGC +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRKQECT*SAQGPC
Trigger: GCATGGACCCTGGGCTGATCATGTGCATTCCTGCTT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTGCAGTGGCTGGGGAATaGCACAACTGTAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRAVAGE*HNCRWC
Trigger: GCACCATCTACAGTTGTGCCATTCCCCAGCCACTGC...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTAAGGGCAGCAAACACTaGCTCTCACTCGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRKGSKH*LSLGRE
Trigger: TTCCCTGCCGAGTGAGAGCCAGTGTTTGCTGCCCTT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGGTCAGAATTGTGGCTaGAGAGGCATCTTGATGACT +
Preference number: 2 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWGQNCG*RGILMT
Trigger: AGTCATCAAGATGCCTCTGCAGCCACAATTCTGACC...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGATTGGGGACCCTAGCATaGGTGACGAATGGGATCCAA +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRLGTLA*VTNGIQ
Trigger: TTGGATCCCATTCGTCACCCATGCTAGGGTCCCCAA...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCCATCTGGACATGACTaGCAGCTCCTCACCCTGAGA +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIPSGHD*QLLTLR
Trigger: TCTCAGGGTGAGGAGCTGCCAGTCATGTCCAGATGG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTATGGAGGGCGTGAAATaGAGGGCGTTAGACAGAGGA +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRMEGVK*RALDRG
Trigger: TCCTCTGTCTAACGCCCTCCATTTCACGCCCTCCAT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACGGCAGGAGACTAAATaGAAGGGGGCTGGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRRQETK*KGAGSL
Trigger: TAAAGAGCCAGCCCCCTTCCATTTAGTCTCCTGCCG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCACTCCGTTTCTCTCTaGGGGAGCACAGGAAGTATC +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIHSVSL*GSTGSI
Trigger: GATACTTCCTGTGCTCCCTCAGAGAGAAACGGAGTG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAGCCTTCACTCATCCTaGAGTATTCCTCCTACACGC +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRSLHSS*SIPPTR
Trigger: GCGTGTAGGAGGAATACTTCAGGATGAGTGAAGGCT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTAGATGGAGATGTGCTTaGTCTAGCCCAGGGTCCATG +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIRWRCA*SSPGSM
Trigger: CATGGACCCTGGGCTAGAGCAAGCACATCTCCATCT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGGTTTTCAGGATTTCTaGGCCCTGCCACTTAGGTCA +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIGFQDF*ALPLRS
Trigger: TGACCTAAGTGGCAGGGCCCAGAAATCCTGAAAACC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 90 bp CTTGAGGACAATTCAAGCTTCGTCATTTTGAGGACGATTCAAGATTaGCAGATCCTTACTTGGAGAAACCGTCAAAGCCTTTGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: LEDNSSFVILRTIQD*QILTWRNRQSLWCK
Trigger: CTTACACCAAAGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGAATTGTCCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTAGGATTTCTGGGCCCTaGCACTTAGGTCAGAATTGT +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIRISGP*HLGQNC
Trigger: ACAATTCTGACCTAAGTGGCAGGGCCCAGAAATCCT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR GCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTACTTTTGACCACGGATaGACATCTTCCCATCCAATC +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRTFDHG*TSSHPI
Trigger: GATTGGATGGGAAGATGTGCATCCGTGGTCAAAAGT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGGGGGCAGACGGAAATaGGATCTGACTCTTTTCATT +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIGGRRK*DLTLFI
Trigger: AATGAAAAGAGTCAGATCCCATTTCCGTCTGCCCCC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTAGTTCTCCTGTACCATaGCCTAGACCCAGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: FVILRTIQDLQILTWRNRSSPVP*PRPRRK
Trigger: TTTTCTTCTGGGTCTAGGCCATGGTACAGGAGAACT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCTTTTGTTACCAAGGTaGGCCAAGATTGCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: APNRIIGCAKGRQQQFVILLLPR*AKIAKE
Trigger: TTCCTTGGCAATCTTGGCTCACCTTGGTAACAAAAG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGATCTTTCAGCATTCCATaGCACACAAAGGAATCCTGT +
Preference number: 2 (lower is better)
Translates to: SSFVILRTIQDLQILTWRSFSIP*HTKESC
Trigger: ACAGGATTCCTTTGTGTGCCATGGAATGCTGAAAGA...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 90 bp TGTAAGATTCACATCCATCTTGAGGACAATTCAAGCTTCGTCATTTaGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGT +
Preference number: 2 (lower is better)
Translates to: CKIHIHLEDNSSFVI*RTIQDLQILTWRNR
Trigger: ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGAATTGTCCTCAAGATGGATGTGAATCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 90 bp CGTATTTTTATATCTTCTATGCATTCACTGCCCCAAATAGAATTATaGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCTCAGGC +
Preference number: 2 (lower is better)
Translates to: RIFISSMHSLPQIEL*GVLKVDSSNLLFSG
Trigger: GCCTGAGAATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGCAGTGAATGCATAGAAGATATAAAAATACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGGGTGCCCTCATCTCTaGGGGGCACTCTCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSGCPHL*GALSQA
Trigger: AGCCTGGGAGAGTGCCCCCAAGAGATGAGGGCACCC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp GGCTGCTGGATGCACGCATCTCTGCGAGGCCCCTGCTaGGTGTCTGTGCGCAGCAAACGCCCATCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: GCWMHASLRGPC*VSVRSKRPSWA
Trigger: GGCCCAGGATGGGCGTTTGCTGCGCACAGACACTCAGCAGGGGCCTCGCAGAGATGCGTGCATCCAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp TGCACGCATCTCTGCGAGGCCCCTGCTGAGTGTCTGTaGGCAGCAAACGCCCATCCTGGGCCTGCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: CTHLCEAPAECL*AANAHPGPACL
Trigger: CAGGCAGGCAGGCCCAGGATGGGCGTTTGCTGCGCACAGACACTCAGCAGGGGCCTCGCAGAGATGCGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp AGGGGGCAGAAGAGGCTCAGAGGAGATCGAGGCAGGTaGTGGTACCTCCTGGGAACGGTCCCGCCACCCCCT +
Preference number: 3 (lower is better)
Translates to: RGQKRLRGDRGR*WYLLGTVPPPP
Trigger: AGGGGGTGGCGGGACCGTTCCCAGGAGGTACCAGCACCTGCCTCGATCTCCTCTGAGCCTCTTCTGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp CTGCTCACCAGCACTTCGCGCTCACTCCGAAGCCAGTaGAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCA +
Preference number: 3 (lower is better)
Translates to: LLTSTSRSLRSQ*SPRRAAGETNS
Trigger: TGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTTCACTGGCTTCGGAGTGAGCGCGAAGTGCTGGTGAGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp GGCTCAGAGGAGATCGAGGCAGGTGCTGGTACCTCCTaGGAACGGTCCCGCCACCCCCTTTGCCCCCAACAA +
Preference number: 3 (lower is better)
Translates to: GSEEIEAGAGTS*ERSRHPLCPQQ
Trigger: TTGTTGGGGGCAAAGGGGGTGGCGGGACCGTTCCCAGGAGGTACCAGCACCTGCCTCGATCTCCTCTGAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp GGGCAGAAGAGGCTCAGAGGAGATCGAGGCAGGTGCTaGTACCTCCTGGGAACGGTCCCGCCACCCCCTTTG +
Preference number: 3 (lower is better)
Translates to: GQKRLRGDRGRC*YLLGTVPPPPL
Trigger: CAAAGGGGGTGGCGGGACCGTTCCCAGGAGGTACCAGCACCTGCCTCGATCTCCTCTGAGCCTCTTCTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp GCCCAGCCCAGCTCACCCACTGTGAAGAGGGGTGGCTaGCTTAGGGTAGGGGCCGAGAGGGCTTCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: AQPSSPTVKRGG*LRVGAERASVL
Trigger: CAGAACTGAAGCCCTCTCGGCCCCTACCCTAAGCCAGCCACCCCTCTTCACAGTGGGTGAGCTGGGCTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp CTCTCCAAGCATGTGCGCCCTGCGGGAACACGGACCTaGGACTTCATGAGGCCAAGCCCTGCCGATGGCACC +
Preference number: 3 (lower is better)
Translates to: LSKHVRPAGTRT*DFMRPSPADGT
Trigger: GGTGCCATCGGCAGGGCTTGGCCTCATGAAGTCTCAGGTCCGTGTTCCCGCAGGGCGCACATGCTTGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp TCCTCAGCAGAAGTGGCCTGGCCTCGGCTACCCTGCTaGGGACTCTCCAAGCATGTGCGCCCTGCGGGAACA +
Preference number: 3 (lower is better)
Translates to: SSAEVAWPRLPC*GLSKHVRPAGT
Trigger: TGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGCCAGGCCACTTCTGCTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp TGGCAGGGGTGCGAGAACAATCTGGTCTCAGATCCCTaGCCGCACTCGCCCAGGGGCAGGCAAAGGTCCCTA +
Preference number: 3 (lower is better)
Translates to: WQGCENNLVSDP*PHSPRGRQRSL
Trigger: TAGGGACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTCTCGCACCCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCCCTGCCCCAGTGCTTaGGGGACCCTAGCATGGGTG +
Preference number: 3 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLPCPSA*GTLAWV
Trigger: CACCCATGCTAGGGTCCCCAAAGCACTGGGGCAGGG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp TCTGCAGCCAGTACCTCGCCCCGCCCTCTTATGTCTTaGAGGGGCTGCTGGATGCACGCATCTCTGCGAGGC +
Preference number: 3 (lower is better)
Translates to: SAASTSPRPLMS*RGCWMHASLRG
Trigger: GCCTCGCAGAGATGCGTGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCGGGGCGAGGTACTGGCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp ACTCGTTCCACACAGCAGTGCCTGTGGTGGAGGGGCTaGTGGCTAAAGGGCTGGTTTCCTCCAGCGCTCCCT +
Preference number: 3 (lower is better)
Translates to: TRSTQQCLWWRG*WLKGWFPPALP
Trigger: AGGGAGCGCTGGAGGAAACCAGCCCTTTAGCCAGCAGCCCCTCCACCACAGGCACTGCTGTGTGGAACGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp CAAGAAGTCGCCTGGCTCCAGAGGCCTGTCAGGTTCTaGACTAAGGCGACTCTGCAGCCAGTACCTCGCCCC +
Preference number: 3 (lower is better)
Translates to: QEVAWLQRPVRF*TKATLQPVPRP
Trigger: GGGGCGAGGTACTGGCTGCAGAGTCGCCTTAGTCCAGAACCTGACAGGCCTCTGGAGCCAGGCGACTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp ATGTGCGCCCTGCGGGAACACGGACCTGAGACTTCATaGGGCCAAGCCCTGCCGATGGCACCTTTGCCAAAG +
Preference number: 3 (lower is better)
Translates to: MCALREHGPETS*GQALPMAPLPK
Trigger: CTTTGGCAAAGGTGCCATCGGCAGGGCTTGGCCTCATGAAGTCTCAGGTCCGTGTTCCCGCAGGGCGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp GCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTaGGGGAACACGGACCTGAGACTTCATGAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: ATLLRTLQACAP*GNTDLRLHEAK
Trigger: CTTGGCCTCATGAAGTCTCAGGTCCGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp GGACCCGGGGCTGTGGAGATGCCTTCCCGAGGACTCTaGTTCATGACTCCGCATCAGGAAGCTCAGGGTTTC +
Preference number: 3 (lower is better)
Translates to: GPGAVEMPSRGL*FMTPHQEAQGF
Trigger: GAAACCCTGAGCTTCCTGATGCGGAGTCATGAAGCAGAGTCCTCGGGAAGGCATCTCCACAGCCCCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp TCGGGCCTGGCCTCTCATTCCTGGCACAGAGGAACCTaGAAGGTCCTGAGGTCAGTCCCTCCTGACATCTGG +
Preference number: 3 (lower is better)
Translates to: SGLASHSWHRGT*KVLRSVPPDIW
Trigger: CCAGATGTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTCCTCTGTGCCAGGAATGAGAGGCCAGGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp CAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTaGCTGGGGCTATCACACCTGGTGACGAGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: QVSAQSVRPGVT*LGLSHLVTRGQ
Trigger: CTGCCCCCTCGTCACCAGGTGTGATAGCCCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCCCTGCCCCAGTGCTTaGGGGACCCTAGCATGGGTG +
Preference number: 3 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGPCPSA*GTLAWV
Trigger: CACCCATGCTAGGGTCCCCAAAGCACTGGGGCAGGG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp GGGCTGTGGAGATGCCTTCCCGAGGACTCTGCTTCATaGCTCCGCATCAGGAAGCTCAGGGTTTCCTACCCG +
Preference number: 3 (lower is better)
Translates to: GLWRCLPEDSAS*LRIRKLRVSYP
Trigger: CGGGTAGGAAACCCTGAGCTTCCTGATGCGGAGTCATGAAGCAGAGTCCTCGGGAAGGCATCTCCACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp TCCAGAGGCCTGTCAGGTTCTGGACTAAGGCGACTCTaGAGCCAGTACCTCGCCCCGCCCTCTTATGTCTTG +
Preference number: 3 (lower is better)
Translates to: SRGLSGSGLRRL*SQYLAPPSYVL
Trigger: CAAGACATAAGAGGGCGGGGCGAGGTACTGGCTGCAGAGTCGCCTTAGTCCAGAACCTGACAGGCCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp TACCAAGGTGAGCCAAGATTGCCAAGGAACACGGGGTaGCCTCATCTCTTGGGGGCACTCTCCCAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: YQGEPRLPRNTG*PHLLGALSQAA
Trigger: AGCAGCCTGGGAGAGTGCCCCCAAGAGATGAGGGCACCCCGTGTTCCTTGGCAATCTTGGCTCACCTTGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp GAGGAGAGGATGGGAGTCATTCCATCTGGACATGACTaGCAGCTCCTCACCCTGAGATGGCTGAGGGGGCCA +
Preference number: 3 (lower is better)
Translates to: EERMGVIPSGHD*QLLTLRWLRGP
Trigger: TGGCCCCCTCAGCCATCTCAGGGTGAGGAGCTGCCAGTCATGTCCAGATGGAATGACTCCCATCCTCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp ATTCCATGGCACACAAAGGAATCCTGTGGGCTAACCTaGGCGACTCTGGCGCTCAGGCCTACCCCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: IPWHTKESCGLT*ATLALRPTPWP
Trigger: AGGCCAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTTGTGTGCCATGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGGGCTGCAGAGGCATCTaGATGACTCAAAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLGCRGI*MTQRQV
Trigger: CACCTGCCTTTGAGTCATCAAGATGCCTCTGCAGCC...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGATGAGCTGAGCAGTTaGAGGCTCGTCAAAGGGGAG +
Preference number: 3 (lower is better)
Translates to: KGILWANLGDSGAQAYPLDELSS*RLVKGE
Trigger: CTCCCCTTTGACGAGCCTCAAACTGCTCAGCTCATC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGAAATCAAGACAGCAGTaGTGGGCCGGCAGAAACCCT +
Preference number: 3 (lower is better)
Translates to: KGILWANLGDSGAQAYPLKSRQQ*WAGRNP
Trigger: AGGGTTTCTGCCGGCCCACAACTGCTGTCTTGATTT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp CCTCTCATTCCTGGCACAGAGGAACCTGGAAGGTCCTaGGGTCAGTCCCTCCTGACATCTGGAGCCACACTG +
Preference number: 3 (lower is better)
Translates to: PLIPGTEEPGRS*GQSLLTSGATL
Trigger: CAGTGTGGCTCCAGATGTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTCCTCTGTGCCAGGAATGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp ACGGATGCACATCTTCCCATCCAATCACAGGCCCACTaGTCACCAGCACTTCGCGCTCACTCCGAAGCCAGT +
Preference number: 3 (lower is better)
Translates to: TDAHLPIQSQAH*SPALRAHSEAS
Trigger: ACTGGCTTCGGAGTGAGCGCGAAGTGCTGGTGAGCAGTGGGCCTGTGATTGGATGGGAAGATGTGCATCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp GTTCCGCAGGGCTGGCAGCTGACTTTTGACCACGGATaGACATCTTCCCATCCAATCACAGGCCCACTGCTC +
Preference number: 3 (lower is better)
Translates to: VPQGWQLTFDHG*TSSHPITGPLL
Trigger: GAGCAGTGGGCCTGTGATTGGATGGGAAGATGTGCATCCGTGGTCAAAAGTCAGCTGCCAGCCCTGCGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp AGGAGTCGGGAGATGACAGTTTCCCAAGAAGTCGCCTaGCTCCAGAGGCCTGTCAGGTTCTGGACTAAGGCG +
Preference number: 3 (lower is better)
Translates to: RSREMTVSQEVA*LQRPVRFWTKA
Trigger: CGCCTTAGTCCAGAACCTGACAGGCCTCTGGAGCCAGGCGACTTCTTGGGAAACTGTCATCTCCCGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp CTGCTGGCTAAAGGGCTGGTTTCCTCCAGCGCTCCCTaGCTCCAGCCTTCACTCATCCTGAAGTATTCCTCC +
Preference number: 3 (lower is better)
Translates to: LLAKGLVSSSAP*LQPSLILKYSS
Trigger: GGAGGAATACTTCAGGATGAGTGAAGGCTGGAGCCAGGGAGCGCTGGAGGAAACCAGCCCTTTAGCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp GGCCTTTATCTTGACTGTGAGATGGAGGGCGTGAAATaGAGGGCGTTAGACAGAGGACCCGGGGCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: GLYLDCEMEGVK*RALDRGPGAVE
Trigger: CTCCACAGCCCCGGGTCCTCTGTCTAACGCCCTCCATTTCACGCCCTCCATCTCACAGTCAAGATAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp CGAGAGGGCTTCAGTTCTGCCTCTGGACAGTGTGTCTaGCCTCCAGATGATGGAACTGAGCCACCCTTAGCC +
Preference number: 3 (lower is better)
Translates to: REGFSSASGQCV*PPDDGTEPPLA
Trigger: GGCTAAGGGTGGCTCAGTTCCATCATCTGGAGGTCAGACACACTGTCCAGAGGCAGAACTGAAGCCCTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp CATCTATTCCTGACTCCCTTAAAGAGTCCAACGAGATaGCGCAGGGGCTCCTGCATGGCAGCCACAGGTCCC +
Preference number: 3 (lower is better)
Translates to: HLFLTPLKSPTR*RRGSCMAATGP
Trigger: GGGACCTGTGGCTGCCATGCAGGAGCCCCTGCGTCATCTCGTTGGACTCTTTAAGGGAGTCAGGAATAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp CATCTGGGAGATGGGACCCTAAACTTCAGGGGAGAGTaGGTTCTGGCAGGGGTGCGAGAACAATCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: HLGDGTLNFRGE*VLAGVREQSGL
Trigger: GAGACCAGATTGTTCTCGCACCCCTGCCAGAACTCACTCTCCCCTGAAGTTTAGGGTCCCATCTCCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp AGAAGGGTCCCCAGTCACCCATCTTTCAGCATTCCATaGCACACAAAGGAATCCTGTGGGCTAACCTGGGCG +
Preference number: 3 (lower is better)
Translates to: RRVPSHPSFSIP*HTKESCGLTWA
Trigger: CGCCCAGGTTAGCCCACAGGATTCCTTTGTGTGCCATGGAATGCTGAAAGATGGGTGACTGGGGACCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp CATGTGAAATCCTTGTCAGTGGCAGCAAACGGCCACTaGGCTTCTCCCCACACAGGAATCAGGCAGCAGTTC +
Preference number: 3 (lower is better)
Translates to: HVKSLSVAANGH*ASPHTGIRQQF
Trigger: GAACTGCTGCCTGATTCCTGTGTGGGGAGAAGCTCAGTGGCCGTTTGCTGCCACTGACAAGGATTTCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp AAAAGGCAGCGGGAGGTTTTCAGGATTTCTGGGCCCTaGCACTTAGGTCAGAATTGTGGCTGCAGAGGCATC +
Preference number: 3 (lower is better)
Translates to: KRQREVFRISGP*HLGQNCGCRGI
Trigger: GATGCCTCTGCAGCCACAATTCTGACCTAAGTGGCAGGGCCCAGAAATCCTGAAAACCTCCCGCTGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp AGTTTGAGGCTCGTCAAAGGGGAGATGAGGAGAGGATaGGAGTCATTCCATCTGGACATGACTGGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SLRLVKGEMRRG*ESFHLDMTGSS
Trigger: GGAGCTGCCAGTCATGTCCAGATGGAATGACTCCCATCCTCTCCTCATCTCCCCTTTGACGAGCCTCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp TCCCTGGGACCCAGAACCACATACGGAAGTTGGCAATaGCTCTTTGATGAGCTGAGCAGTTTGAGGCTCGTC +
Preference number: 3 (lower is better)
Translates to: SLGPRTTYGSWQ*LFDELSSLRLV
Trigger: GACGAGCCTCAAACTGCTCAGCTCATCAAAGAGCCATTGCCAACTTCCGTATGTGGTTCTGGGTCCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGGCTGCAGAGGCATCTaGATGACTCAAAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGGCRGI*MTQRQV
Trigger: CACCTGCCTTTGAGTCATCAAGATGCCTCTGCAGCC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCCACTTAGGTCAGAATaGTGGCTGCAGAGGCATCTT +
Preference number: 3 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGPLRSE*WLQRHL
Trigger: AAGATGCCTCTGCAGCCACAATTCTGACCTAAGTGG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp TTGCAGATCCTTACTTGGAGAAACCGTCAAAGCCTTTaGTGTAAGCCAGGCCATGCCCACCATGCAGGTGGA +
Preference number: 3 (lower is better)
Translates to: LQILTWRNRQSL*CKPGHAHHAGG
Trigger: TCCACCTGCATGGTGGGCATGGCCTGGCTTACACCAAAGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCCCACTTAGGTCAGAATaGTGGCTGCAGAGGCATCTT +
Preference number: 3 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGPLRSE*WLQRHL
Trigger: AAGATGCCTCTGCAGCCACAATTCTGACCTAAGTGG...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGTCCCGCCACCCCCTTaGCCCCCAACAAATCCTGGG +
Preference number: 3 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIVPPPP*PPTNPG
Trigger: CCCAGGATTTGTTGGGGGCAAAGGGGGTGGCGGGAC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGGGTGCCCTCATCTCTaGGGGGCACTCTCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIGCPHL*GALSQA
Trigger: AGCCTGGGAGAGTGCCCCCAAGAGATGAGGGCACCC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCTGTTGGACAACTGTTaGGGAAACGGCAGGAGACTA +
Preference number: 3 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKLLDNC*GNGRRL
Trigger: TAGTCTCCTGCCGTTTCCCAAACAGTTGTCCAACAG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR GCA 72 bp GGGTGGTTGTTCCGAGGGGTCATAACAACTACAGGCTaGAGAAAGCATGGGATTCATTCCAAGAACTCGTTC +
Preference number: 3 (lower is better)
Translates to: GWLFRGVITTTG*RKHGIHSKNSF
Trigger: GAACGAGTTCTTGGAATGAATCCCATGCTTTCTGCAGCCTGTAGTTGTTATGACCCCTCGGAACAACCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACCGCCCTCTTATGTCTaGAAGGGGCTGCTGGATGCA +
Preference number: 3 (lower is better)
Translates to: SSFVILRTIQDLQILTWRPPSYV*KGLLDA
Trigger: TGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCGG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACAAGGTGAGCCAAGATaGCCAAGGAACACGGGGTGC +
Preference number: 3 (lower is better)
Translates to: SSFVILRTIQDLQILTWRQGEPR*PRNTGC
Trigger: GCACCCCGTGTTCCTTGGCAATCTTGGCTCACCTTG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CCA 72 bp ATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTaGAGAAACCGTCAAAGCCTTTGGTGTAAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: ILRTIQDLQILT*RNRQSLWCKPG
Trigger: GCCTGGCTTACACCAAAGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR-3UTR CAA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCCTGGCAAACTGAGTTaGCAAAACAACTTACATCTG +
Preference number: 3 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIPGKLS*QNNLHL
Trigger: CAGATGTAAGTTGTTTTGCAAACTCAGTTTGCCAGG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR TCA 72 bp ACATCCATCTTGAGGACAATTCAAGCTTCGTCATTTTaGGGACGATTCAAGATTTGCAGATCCTTACTTGGA +
Preference number: 3 (lower is better)
Translates to: TSILRTIQASSF*GRFKICRSLLG
Trigger: TCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGAATTGTCCTCAAGATGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCCTCCCCATCCCAGCCTaGGGCTCTGGTTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSLPIPA*GSGSAG
Trigger: CCCTGCGGAACCAGAGCCTCAGGCTGGGATGGGGAG...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCCTGGTCTCAGATCCCTaGCCGCACTCGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSLVSDP*PHSPRG
Trigger: GCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAG...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCCGTACTCCTCCTCCGTaGGCTCCGACAGGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSRTPPP*APTGAP
Trigger: CGGAGCACCTGTCGGAGCTCACGGAGGAGGAGTACG...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCTCACTCCGAAGCCAGTaGAGCCCCCGCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSSLRSQ*SPRRAA
Trigger: GGCTGCTCTGCGGGGGCTTCACTGGCTTCGGAGTGA...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGAAGGGGCTGCTGGATaGACGCATCTCTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSEGAAG*THLCEA
Trigger: GGCCTCGCAGAGATGCGTGCATCCAGCAGCCCCTTC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGCTGAGGAGCCACACTaGGCGGAGGCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVAEEPH*AEAGSG
Trigger: CCCTGAGCCAGCCTCCGCTCAGTGTGGCTCCTCAGC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGGACCTGAGACTTCATaGGGCCAAGCCCTGCCGATG +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSGPETS*GQALPM
Trigger: CATCGGCAGGGCTTGGCCTCATGAAGTCTCAGGTCC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCGGGGAGGATGGGCTTaGCAGGGGTCGGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPRGGWA*QGSGAP
Trigger: TGGTGCTCCCGACCCCTGGCAAGCCCATCCTCCCCG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCTGGACTGCTCCTCTTaGTGGGCCTGCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTLDCSS*WACSPV
Trigger: GACAGGGGAGCAGGCCCAGCAAGAGGAGCAGTCCAG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGGAAGGGGCTGCTGGATaGACGCATCTCTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTEGAAG*THLCEA
Trigger: GGCCTCGCAGAGATGCGTGCATCCAGCAGCCCCTTC...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCCGGGGCTGTGGAGATaGCTTCCCGAGGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTPGLWR*LPEDSA
Trigger: AGCAGAGTCCTCGGGAAGGCATCTCCACAGCCCCGG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCTCCCAAGAAGTCGCCTaGCTCCAGAGGCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSSQEVA*LQRPVR
Trigger: CCTGACAGGCCTCTGGAGCCAGGCGACTTCTTGGGA...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGGTGCTGGTACCTCCTaGGAACGGTCCCGCCACCCC +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVGAGTS*ERSRHP
Trigger: GGGGTGGCGGGACCGTTCCCAGGAGGTACCAGCACC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCTCCTCCAGCGCTCCCTaGCTCCAGCCTTCACTCATC +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSSSSAP*LQPSLI
Trigger: GATGAGTGAAGGCTGGAGCCAGGGAGCGCTGGAGGA...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGTCCTGTGGGCTAACCTaGGCGACTCTGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTSCGLT*ATLALR
Trigger: CCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGA...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGGGACCTGAGACTTCATaGGGCCAAGCCCTGCCGATG +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTGPETS*GQALPM
Trigger: CATCGGCAGGGCTTGGCCTCATGAAGTCTCAGGTCC...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCCTCGGCTACCCTGCTaGGGACTCTCCAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTPRLPC*GLSKHV
Trigger: CACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGCCTGCTCCCCTGTCTaGACGGGGAGGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPACSPV*TGRMGL
Trigger: CAAGCCCATCCTCCCCGTGCAGACAGGGGAGCAGGC...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTCCTCTTGCTGGGCCTaGTCCCCTGTCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPSSCWA*SPVCTG
Trigger: CCCCGTGCAGACAGGGGAGCAGGCCCAGCAAGAGGA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCCAAGGAACACGGGGTaGCCTCATCTCTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTPRNTG*PHLLGA
Trigger: TGCCCCCAAGAGATGAGGGCACCCCGTGTTCCTTGG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCTCTGCACGGGGAGGATaGGCTTGCCAGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVSARGG*ACQGSG
Trigger: TCCCGACCCCTGGCAAGCCCATCCTCCCCGTGCAGA...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGGTTCCAAGGCTCCCTaGGACCCAGAACCACATACG +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSGSKAP*DPEPHT
Trigger: CGTATGTGGTTCTGGGTCCCAGGGAGCCTTGGAACC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGAGGCCAGGTGTGACCTaGCTGGGGCTATCACACCTG +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTRPGVT*LGLSHL
Trigger: CAGGTGTGATAGCCCCAGCCAGGTCACACCTGGCCT...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGTCCTCCAGCGCTCCCTaGCTCCAGCCTTCACTCATC +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTSSSAP*LQPSLI
Trigger: GATGAGTGAAGGCTGGAGCCAGGGAGCGCTGGAGGA...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCTGGTGGTGGTGCCGATaGGCTGCCGCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVWWWCR*AAASPW
Trigger: CCATGGAGAAGCGGCAGCTCATCGGCACCACCACCA...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGGAGGAGTCGGGAGATaGCAGTTTCCCAAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSGGVGR*QFPKKS
Trigger: CGACTTCTTGGGAAACTGTCATCTCCCGACTCCTCC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGTGGTGCCGATGAGCTaGCGCTTCTCCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVVVPMS*RFSMGS
Trigger: GGAGCCCATGGAGAAGCGGCAGCTCATCGGCACCAC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGTGCTGCTCTGGCCCCTaGCCCAGTGCTTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLCCSGP*PSALGT
Trigger: GGTCCCCAAAGCACTGGGGCAGGGGCCAGAGCAGCA...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCATGAGGCCAAGCCCTaGCGATGGCACCTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTHEAKP*RWHLCQ
Trigger: TTGGCAAAGGTGCCATCGGCAGGGCTTGGCCTCATG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCAATCACAGGCCCACTaGTCACCAGCACTTCGCGCT +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTQSQAH*SPALRA
Trigger: AGCGCGAAGTGCTGGTGAGCAGTGGGCCTGTGATTG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGAGGGGTTCAGGTACTTaGCGTCCAGCCACACGAAGC +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTRGSGT*RPATRS
Trigger: GCTTCGTGTGGCTGGACGCCAAGTACCTGAACCCCT...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGTGAAGAGGGGTGGCTaGCTTAGGGTAGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVVKRGG*LRVGAE
Trigger: CTCGGCCCCTACCCTAAGCCAGCCACCCCTCTTCAC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTCCTGTGGGCTAACCTaGGCGACTCTGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPSCGLT*ATLALR
Trigger: CCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGAGGACCCGGGGCTGTaGAGATGCCTTCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLEDPGL*RCLPED
Trigger: GTCCTCGGGAAGGCATCTCCACAGCCCCGGGTCCTC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCTGGTTCCGCAGGGCTaGCAGCTGACTTTTGACCAC +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTLVPQG*QLTFDH
Trigger: GTGGTCAAAAGTCAGCTGCCAGCCCTGCGGAACCAG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGCAGGGGCTCCTGCATaGCAGCCACAGGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLAGAPA*QPQVPH
Trigger: ATGGGGGACCTGTGGCTGCCATGCAGGAGCCCCTGC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCAGAAATTAAGCCAGTaGGAGTGCCGAGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTQKLSQ*ECRALQ
Trigger: CTGCAGCGCTCGGCACTCTCACTGGCTTAATTTCTG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCTTGGCTGGCCTGCTCTaGCTTCAGGGTCAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVLAGLL*LQGQGE
Trigger: CTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAA...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCCCAGCTCACCCACTGTaGAGAGGGGTGGCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVPAHPL*RGVAGL
Trigger: TAAGCCAGCCACCCCTCTTCACAGTGGGTGAGCTGG...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCTCTTCTCCCCCATCCTaGGGAGCTTCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVSSPPS*GASRTT
Trigger: GGTGGTCCTGGAAGCTCCGCAGGATGGGGGAGAAGA...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTCTTCTCCCCCATCCTaGGGAGCTTCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPSSPPS*GASRTT
Trigger: GGTGGTCCTGGAAGCTCCGCAGGATGGGGGAGAAGA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGTCCTCTTGCTGGGCCTaGTCCCCTGTCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLSSCWA*SPVCTG
Trigger: CCCCGTGCAGACAGGGGAGCAGGCCCAGCAAGAGGA...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTGGTGCAGGTCCTCCTaGGTCAGCCTCCGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPWCRSS*VSLRVK
Trigger: CTTCACTCGGAGGCTGACGCAGGAGGACCTGCACCA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGCGTCAGAGCAGCTCCTaGTCGTCGTCCTCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLRQSSS*SSSSEP
Trigger: CGGCTCCGAGGACGACGAGCAGGAGCTGCTCTGACG...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCCACCAAGCCCCACATaGTCTTCCGCCACAGCATCG +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPPPSPT*SSATAS
Trigger: CGATGCTGTGGCGGAAGAGCATGTGGGGCTTGGTGG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGTCCCGCCACCCCCTTTaGCCCCAACAAATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLSRHPL*PQQILG
Trigger: CCCCAGGATTTGTTGGGGGCAAAGGGGGTGGCGGGA...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCCCAAGGAACACGGGGTaGCCTCATCTCTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVPRNTG*PHLLGA
Trigger: TGCCCCCAAGAGATGAGGGCACCCCGTGTTCCTTGG...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGAAGGTGAGCCAAGATTaGCAAGGAACACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTKVSQD*QGTRGA
Trigger: GGCACCCCGTGTTCCTTGGCAATCTTGGCTCACCTT...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGAGGCCATGCCCACCATaGAGGTGGAAGCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLRPCPP*RWKQGG
Trigger: GCCTCCCTGCTTCCACCTGCATGGTGGGCATGGCCT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGACACTGAGCGGAGGCTaGCTCAGGGAGGAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLTLSGG*LREESG
Trigger: TCCCGACTCCTCCCTGAGCCAGCCTCCGCTCAGTGT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCAGATGACTGGCACCTaGCCCCATGCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLQMTGT*PHAPSP
Trigger: AGGGGAGGGAGCATGGGGCCAGGTGCCAGTCATCTG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGACAGGTGGCTGACCCCTaGCTCTGCCAGTCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRQVADP*LCQSGG
Trigger: CCCGCCGGACTGGCAGAGCCAGGGGTCAGCCACCTG...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGGAGGGAGATCAGATaGCAGGAGGCGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPGREIR*QEATRG
Trigger: GCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCC...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTGGGGTGTGTGTGCGTaGAGCGTGTGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPWGVCA*SVCSRM
Trigger: CATCCTGGAGCACACGCTCCACGCACACACACCCCA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGGTGAAGAGGGGTGGCTaGCTTAGGGTAGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLVKRGG*LRVGAE
Trigger: CTCGGCCCCTACCCTAAGCCAGCCACCCCTCTTCAC...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGCTCAGGCCTACCCCTTaGCCTCATGCCAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLLRPTP*PHASQP
Trigger: GGGCTGGCTGGCATGAGGCCAAGGGGTAGGCCTGAG...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCAACCGTCAAAGCCTTTaGTGTAAGCCAGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSNRQSL*CKPGHA
Trigger: GGCATGGCCTGGCTTACACCAAAGGCTTTGACGGTT...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 72 bp CTCTGCAGCCAGTACCTCGCCCCGCCCTCTTATGTCTaGAAGGGGCTGCTGGATGCACGCATCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: LCSQYLAPPSYV*KGLLDARISAR
Trigger: CCTCGCAGAGATGCGTGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCGGGGCGAGGTACTGGCTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGCACCAGTTTCGTCGTaGCAACCAGGGTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVAPVSS*QPGWCG
Trigger: TCCACACCACCCTGGTTGTCACGACGAAACTGGTGC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCCGGCGGGGGCAGCATaGAGGCAGTGGCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGPAGAA*RQWLGN
Trigger: ATTCCCCAGCCACTGCCTTCATGCTGCCCCCGCCGG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGACCGGCGGGGGCAGCATaGAGGCAGTGGCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRPAGAA*RQWLGN
Trigger: ATTCCCCAGCCACTGCCTTCATGCTGCCCCCGCCGG...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGAACCTGGAAGGTCCTaGGGTCAGTCCCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVEPGRS*GQSLLT
Trigger: TGTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCTCCCCATCCCAGCCTaGGGCTCTGGTTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGLPIPA*GSGSAG
Trigger: CCCTGCGGAACCAGAGCCTCAGGCTGGGATGGGGAG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGTGCGGAGGGTCTGCTaGATGAGGATCTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVVRRVC*MRIWVT
Trigger: AGTCACCCAGATCCTCATGCAGCAGACCCTCCGCAC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCGTCCTTCTTGTTCCTaGGGTGTGCCTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPRPSCS*GVPWRP
Trigger: AGGACGCCAAGGCACACCGCAGGAACAAGAAGGACG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGTGAGCTCCGACAGGTaGTCCGACTCCACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVVSSDR*SDSTVL
Trigger: CAACACTGTGGAGTCGGAGCACCTGTCGGAGCTCAC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCCACCAAGCCCCACATaGTCTTCCGCCACAGCATCG +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLPPSPT*SSATAS
Trigger: CGATGCTGTGGCGGAAGAGCATGTGGGGCTTGGTGG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGCGTTCCACACAGCAGTaGCTGTGGTGGAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLRSTQQ*LWWRGC
Trigger: GCAGCCCCTCCACCACAGGCACTGCTGTGTGGAACG...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCATGAGGCCAAGCCCTaGCGATGGCACCTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPHEAKP*RWHLCQ
Trigger: TTGGCAAAGGTGCCATCGGCAGGGCTTGGCCTCATG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGCTGCCGCTTCTCCATaGGCTCCAGGTCCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLAAASP*APGPGV
Trigger: TACACCTGGACCTGGAGCCCATGGAGAAGCGGCAGC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGATCTGGATGCGCCCGTaGTGCAGGTCCTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLIWMRP*CRSSCV
Trigger: GACGCAGGAGGACCTGCACCACGGGCGCATCCAGAT...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCCACACTGCCTGAGGTaGAAGAGATGGAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTPHCLR*KRWRCA
Trigger: AGCACATCTCCATCTCTTCCACCTCAGGCAGTGTGG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGGTGCTGGTACCTCCTaGGAACGGTCCCGCCACCCC +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGGAGTS*ERSRHP
Trigger: GGGGTGGCGGGACCGTTCCCAGGAGGTACCAGCACC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTGCTGGCTAAAGGGCTaGTTTCCTCCAGCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPCWLKG*FPPALP
Trigger: AGGGAGCGCTGGAGGAAACCAGCCCTTTAGCCAGCA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCCAGAAATTAAGCCAGTaGGAGTGCCGAGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVQKLSQ*ECRALQ
Trigger: CTGCAGCGCTCGGCACTCTCACTGGCTTAATTTCTG...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGGGACATCACGATGCCTaGGAAAAGGATGGCCATGAT +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTGHHDA*EKDGHD
Trigger: ATCATGGCCATCCTTTTCTCAGGCATCGTGATGTCC...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGCGTCAGCCTCCGAGTaGAGAAGGGGTTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLASASE*RRGSGT
Trigger: AGTACCTGAACCCCTTCTTCACTCGGAGGCTGACGC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCATTCCATCTGGACATaGCTGGCAGCTCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPHSIWT*LAAPHP
Trigger: AGGGTGAGGAGCTGCCAGTCATGTCCAGATGGAATG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGAACTTCAGGGGAGAGTaGGTTCTGGCAGGGGTGCGA +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLNFRGE*VLAGVR
Trigger: TCGCACCCCTGCCAGAACTCACTCTCCCCTGAAGTT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCGGACTAAGGCGACTCTaGAGCCAGTACCTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCGLRRL*SQYLAP
Trigger: CGGGGCGAGGTACTGGCTGCAGAGTCGCCTTAGTCC...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCGGTCAGAATTGTGGCTaGAGAGGCATCTTGATGACT +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSGQNCG*RGILMT
Trigger: AGTCATCAAGATGCCTCTGCAGCCACAATTCTGACC...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGCTGGTCTCAGATCCCTaGCCGCACTCGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLLVSDP*PHSPRG
Trigger: GCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAG...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCCCTGGCCCATCCCCCTaGACACTTATCTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCPGPSP*TLISGT
Trigger: GGTCCCCGAGATAAGTGTGCAGGGGGATGGGCCAGG...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCAAATGGTCATGCCGCTaGACTGCTCCTCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVKWSCR*TAPLAG
Trigger: CCCAGCAAGAGGAGCAGTCCAGCGGCATGACCATTT...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCACACTGAGCGGAGGCTaGCTCAGGGAGGAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCTLSGG*LREESG
Trigger: TCCCGACTCCTCCCTGAGCCAGCCTCCGCTCAGTGT...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGAGCTTCACAGATGACTaGCACCTGGCCCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLSFTDD*HLAPCS
Trigger: GGAGCATGGGGCCAGGTGCCAGTCATCTGTGAAGCT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCTGGCACAACTGTAGATaGTGCTCCTCTAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVWHNCR*CSSRQG
Trigger: CCCCTGCCTAGAGGAGCACCATCTACAGTTGTGCCA...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGCAGTGGCTGGGGAATaGCACAACTGTAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPAVAGE*HNCRWC
Trigger: GCACCATCTACAGTTGTGCCATTCCCCAGCCACTGC...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGTGGGGTGTGTGTGCGTaGAGCGTGTGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLWGVCA*SVCSRM
Trigger: CATCCTGGAGCACACGCTCCACGCACACACACCCCA...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGTGCTTCCTGCTTGGCTaGCCTGCTCTGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLCFLLG*PALTSG
Trigger: CCCTGAAGTCAGAGCAGGCCAGCCAAGCAGGAAGCA...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGGGAGAGTGAGTTCTaGCAGGGGTGCGAGAACAAT +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPGESEF*QGCENN
Trigger: ATTGTTCTCGCACCCCTGCCAGAACTCACTCTCCCC...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGCCCCCAACAAATCCTaGGGCCCCTCCACCAAGCCC +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRAPNKS*GPSTKP
Trigger: GGGCTTGGTGGAGGGGCCCCAGGATTTGTTGGGGGC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTACACAAGCCACGGGGTaGTTGTTCCGAGGGGTCATA +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPTQATG*LFRGVI
Trigger: TATGACCCCTCGGAACAACCACCCCGTGGCTTGTGT...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGAGGACCCGGGGCTGTaGAGATGCCTTCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGEDPGL*RCLPED
Trigger: GTCCTCGGGAAGGCATCTCCACAGCCCCGGGTCCTC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCACATTGAAACCCTCATaGGTTGTATTGGGGAACCTC +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSTLKPS*VVLGNL
Trigger: GAGGTTCCCCAATACAACTCATGAGGGTTTCAATGT...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGGCGTCAGCCTCCGAGTaGAGAAGGGGTTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLASASE*RRGSGT
Trigger: AGTACCTGAACCCCTTCTTCACTCGGAGGCTGACGC...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCACTCCGTTTCTCTCTaGGGGAGCACAGGAAGTATC +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPHSVSL*GSTGSI
Trigger: GATACTTCCTGTGCTCCCTCAGAGAGAAACGGAGTG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCGCAGCAAACGGCCACTaGGCTTCTCCCCACACAGGA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCAANGH*ASPHTG
Trigger: TCCTGTGTGGGGAGAAGCTCAGTGGCCGTTTGCTGC...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCCGCAGGGCTGGCAGCTaGCTTTTGACCACGGATGCA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCRRAGS*LLTTDA
Trigger: TGCATCCGTGGTCAAAAGTCAGCTGCCAGCCCTGCG...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGGTGAGCTCCGACAGGTaGTCCGACTCCACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLVSSDR*SDSTVL
Trigger: CAACACTGTGGAGTCGGAGCACCTGTCGGAGCTCAC...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGTGGATGCGCCCGTGGTaGAGGTCCTCCTGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLWMRPW*RSSCVS
Trigger: GCTGACGCAGGAGGACCTGCACCACGGGCGCATCCA...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGATCCCGCCACCCCCTTTaGCCCCAACAAATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRSRHPL*PQQILG
Trigger: CCCCAGGATTTGTTGGGGGCAAAGGGGGTGGCGGGA...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCGGAGATCGAGGCAGGTaGTGGTACCTCCTGGGAACG +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCGDRGR*WYLLGT
Trigger: CGTTCCCAGGAGGTACCAGCACCTGCCTCGATCTCC...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAAGGTGAGCCAAGATTaGCAAGGAACACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLKVSQD*QGTRGA
Trigger: GGCACCCCGTGTTCCTTGGCAATCTTGGCTCACCTT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGCTGTGGTGGAGGGGCTaGTGGCTAAAGGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLLWWRG*WLKGWF
Trigger: AAACCAGCCCTTTAGCCAGCAGCCCCTCCACCACAG...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGTACCCCTTGGCCTCATaGCAGCCAGCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLYPLAS*QPAQPS
Trigger: GCTGGGCTGGGCTGGCTGGCATGAGGCCAAGGGGTA...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCACTTTTGACCACGGATaGACATCTTCCCATCCAATC +
Preference number: 4 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSTFDHG*TSSHPI
Trigger: GATTGGATGGGAAGATGTGCATCCGTGGTCAAAAGT...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGTCTGCACGGGGAGGATaGGCTTGCCAGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLSARGG*ACQGSG
Trigger: TCCCGACCCCTGGCAAGCCCATCCTCCCCGTGCAGA...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGTGCTTCCTGCTTGGCTaGCCTGCTCTGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLCFLLG*PALTSG
Trigger: CCCTGAAGTCAGAGCAGGCCAGCCAAGCAGGAAGCA...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGCTGCTGACCTCACCTaGCCGACAGGGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRAADLT*PTGGRR
Trigger: TCTTCTGCCCCCTGTCGGCCAGGTGAGGTCAGCAGC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCCATCCTCAGCAGAAGTaGCCTGGCCTCGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCHPQQK*PGLGYP
Trigger: AGGGTAGCCGAGGCCAGGCCACTTCTGCTGAGGATG...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCCGGCAGGAGACTAAATaGAAGGGGGCTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVRQETK*KGAGSL
Trigger: TAAAGAGCCAGCCCCCTTCCATTTAGTCTCCTGCCG...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCAGGGGCTCCTGCATaGCAGCCACAGGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLAGAPA*QPQVPH
Trigger: ATGGGGGACCTGTGGCTGCCATGCAGGAGCCCCTGC...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGTCAGTGGCCCGAGGGTaGGAGAAAGCGCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLSVARG*EKARGR
Trigger: CCTCCCACGCGCTTTCTCCCACCCTCGGGCCACTGA...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417961.5
CDS-3UTR TCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCTAGGACAAGGAGGCTaGAGAAAATGGTCATGCCGC +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLLGQGG*RKWSCR
Trigger: GCGGCATGACCATTTTCTTCAGCCTCCTTGTCCTAG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCAGCACGGGGTCCACATaGAGTGCATTGAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVSTGST*SALKMA
Trigger: TGCCATTTTCAATGCACTTCATGTGGACCCCGTGCT...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCAAAGACCAGCATGTTaGGCACGGGGTCCACATGAA +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLQRPAC*ARGPHE
Trigger: TTCATGTGGACCCCGTGCTCAACATGCTGGTCTTTG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCCGTACTCCTCCTCCGTaGGCTCCGACAGGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGRTPPP*APTGAP
Trigger: CGGAGCACCTGTCGGAGCTCACGGAGGAGGAGTACG...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCGAAGATGGCAGCAGTaGGCAGACACTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGRRWQQ*ADTAGP
Trigger: AGGCCCTGCAGTGTCTGCTCACTGCTGCCATCTTCG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGTGGAGCCACACTGCCTaGGGTGGAAGAGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLWSHTA*GGRDGD
Trigger: ATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCA...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGCGGGAACACGGACCTaGGACTTCATGAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRAGTRT*DFMRPS
Trigger: GCTTGGCCTCATGAAGTCTCAGGTCCGTGTTCCCGC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCTGGCAGCTGACTTTTaGCCACGGATGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLLAADF*PRMHIF
Trigger: GAAGATGTGCATCCGTGGTCAAAAGTCAGCTGCCAG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGCTGGCAGCTGACTTTTaGCCACGGATGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLLAADF*PRMHIF
Trigger: GAAGATGTGCATCCGTGGTCAAAAGTCAGCTGCCAG...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCAAGAGTCCAACGAGATaGCGCAGGGGCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCKSPTR*RRGSCM
Trigger: CATGCAGGAGCCCCTGCGTCATCTCGTTGGACTCTT...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAAGCAGGACCCGCTTTTaGTTCCGGCTTCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRSRTRF*FRLPLE
Trigger: CTCCAGCGGAAGCCGGAAGCAAAAGCGGGTCCTGCT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGCCTGCTCCCCTGTCTaGACGGGGAGGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGACSPV*TGRMGL
Trigger: CAAGCCCATCCTCCCCGTGCAGACAGGGGAGCAGGC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGTCATGCCGCTGGACTaGTCCTCTTGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLVMPLD*SSCWAC
Trigger: GCAGGCCCAGCAAGAGGAGCAGTCCAGCGGCATGAC...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCTGGATGCGCCCGTGGTaGAGGTCCTCCTGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGWMRPW*RSSCVS
Trigger: GCTGACGCAGGAGGACCTGCACCACGGGCGCATCCA...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGGAGTTTTCATCTGGATaGGCCCGTGGTGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLEFSSG*ARGAGP
Trigger: AGGACCTGCACCACGGGCGCATCCAGATGAAAACTC...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCCGTCAGAGCAGCTCCTaGTCGTCGTCCTCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGRQSSS*SSSSEP
Trigger: CGGCTCCGAGGACGACGAGCAGGAGCTGCTCTGACG...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGGATGCACGCATCTCTaGGAGGCCCCTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGGCTHL*EAPAEC
Trigger: ACACTCAGCAGGGGCCTCGCAGAGATGCGTGCATCC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGAGATGGAGATGTGCTTaGTCTAGCCCAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLRWRCA*SSPGSM
Trigger: CATGGACCCTGGGCTAGAGCAAGCACATCTCCATCT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGGAGATCGAGGCAGGTaGTGGTACCTCCTGGGAACG +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRGDRGR*WYLLGT
Trigger: CGTTCCCAGGAGGTACCAGCACCTGCCTCGATCTCC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGCCGGGGCTGTGGAGATaGCTTCCCGAGGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLPGLWR*LPEDSA
Trigger: AGCAGAGTCCTCGGGAAGGCATCTCCACAGCCCCGG...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAGAGCAGCACATCACTaGTCAGGAAACAGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLRAAHH*SGNRGL
Trigger: TAGGCCCCTGTTTCCTGAGCAGTGATGTGCTGCTCT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCAGGGGTTCAGGTACTTaGCGTCCAGCCACACGAAGC +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCRGSGT*RPATRS
Trigger: GCTTCGTGTGGCTGGACGCCAAGTACCTGAACCCCT...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCTTAGGTCAGAATTGTaGCTGCAGAGGCATCTTGAT +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTLRSEL*LQRHLD
Trigger: ATCAAGATGCCTCTGCAGCCACAATTCTGACCTAAG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCGGTTTTCAGGATTTCTaGGCCCTGCCACTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVGFQDF*ALPLRS
Trigger: TGACCTAAGTGGCAGGGCCCAGAAATCCTGAAAACC...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAGGGCCTCAGCACAGTaGCCTCCGATTAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLRASAQ*PPIRQK
Trigger: CTTTTGTCTAATCGGAGGCCACTGTGCTGAGGCCCT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGTTGGGGACCCTAGCATaGGTGACGAATGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLLGTLA*VTNGIQ
Trigger: TTGGATCCCATTCGTCACCCATGCTAGGGTCCCCAA...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGCCACACTGCCTGAGGTaGAAGAGATGGAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLPHCLR*KRWRCA
Trigger: AGCACATCTCCATCTCTTCCACCTCAGGCAGTGTGG...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCGGTGCGAGAACAATCTaGTCTCAGATCCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCGARTI*SQIPAR
Trigger: GCGGGCAGGGATCTGAGACCAGATTGTTCTCGCACC...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAAGGCCAGGTGTGACCTaGCTGGGGCTATCACACCTG +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRRPGVT*LGLSHL
Trigger: CAGGTGTGATAGCCCCAGCCAGGTCACACCTGGCCT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGCCCCCAACAAATCCTaGGGCCCCTCCACCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGAPNKS*GPSTKP
Trigger: GGGCTTGGTGGAGGGGCCCCAGGATTTGTTGGGGGC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCCTCAGGCCTACCCCTTaGCCTCATGCCAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGLRPTP*PHASQP
Trigger: GGGCTGGCTGGCATGAGGCCAAGGGGTAGGCCTGAG...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGCACAAAGGAATCCTGTaGGCTAACCTGGGCGACTCT +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLHKGIL*ANLGDS
Trigger: AGAGTCGCCCAGGTTAGCCCACAGGATTCCTTTGTG...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCATCCTCAGCAGAAGTaGCCTGGCCTCGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGHPQQK*PGLGYP
Trigger: AGGGTAGCCGAGGCCAGGCCACTTCTGCTGAGGATG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGATGGAGGGCGTGAAATaGAGGGCGTTAGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLMEGVK*RALDRG
Trigger: TCCTCTGTCTAACGCCCTCCATTTCACGCCCTCCAT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCCCAGCCTGAGGCTCTaGTTCCGCAGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKPSLRL*FRRAGS
Trigger: GCTGCCAGCCCTGCGGAACCAGAGCCTCAGGCTGGG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGGTGGGAGAAAGCGCGTaGGAGGATTGCTTCTTAGTC +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLVGESA*EDCFLV
Trigger: GACTAAGAAGCAATCCTCCCACGCGCTTTCTCCCAC...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417961.5
CDS-3UTR TCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCAGACAAAAGAACAACTaGGTACGGGAATGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVRQKNN*VREWWG
Trigger: TCCCCACCATTCCCGTACTCAGTTGTTCTTTTGTCT...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGTCGTCAAAGGGGAGATaGGGAGAGGATGGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLSSKGR*GEDGSH
Trigger: ATGACTCCCATCCTCTCCTCATCTCCCCTTTGACGA...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCTGGAGCCACACTGCCTaGGGTGGAAGAGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCWSHTA*GGRDGD
Trigger: ATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCA...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAGCCTTCACTCATCCTaGAGTATTCCTCCTACACGC +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLSLHSS*SIPPTR
Trigger: GCGTGTAGGAGGAATACTTCAGGATGAGTGAAGGCT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGAAGAGTCCAACGAGATaGCGCAGGGGCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGKSPTR*RRGSCM
Trigger: CATGCAGGAGCCCCTGCGTCATCTCGTTGGACTCTT...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCCTGGACTGCTCCTCTTaGTGGGCCTGCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGLDCSS*WACSPV
Trigger: GACAGGGGAGCAGGCCCAGCAAGAGGAGCAGTCCAG...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGACGGTGCGGAGGGTCTaGTGCATGAGGATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLTVRRV*CMRIWV
Trigger: CACCCAGATCCTCATGCAGCAGACCCTCCGCACCGT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGTGGTGCCGATGAGCTaGCGCTTCTCCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGVVPMS*RFSMGS
Trigger: GGAGCCCATGGAGAAGCGGCAGCTCATCGGCACCAC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGTACCCCTTGGCCTCATaGCAGCCAGCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKYPLAS*QPAQPS
Trigger: GCTGGGCTGGGCTGGCTGGCATGAGGCCAAGGGGTA...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCAATCACAGGCCCACTaGTCACCAGCACTTCGCGCT +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGQSQAH*SPALRA
Trigger: AGCGCGAAGTGCTGGTGAGCAGTGGGCCTGTGATTG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGAGCGCGTGGGAGGATTaGTTCTTAGTCTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGSAWED*FLVSPG
Trigger: CCCGGGAGAGACTAAGAAGCAATCCTCCCACGCGCT...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCCCATCTGGACATGACTaGCAGCTCCTCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCPSGHD*QLLTLR
Trigger: TCTCAGGGTGAGGAGCTGCCAGTCATGTCCAGATGG...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCCTGGCCTCTCATTCCTaGCACAGAGGAACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCLASHS*HRGTWK
Trigger: CTTCCAGGTTCCTCTGTGCCAGGAATGAGAGGCCAG...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGGTGCGAGAACAATCTaGTCTCAGATCCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRGARTI*SQIPAR
Trigger: GCGGGCAGGGATCTGAGACCAGATTGTTCTCGCACC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGCTTCAGTTCTGCCTCTaGACAGTGTGTCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLLQFCL*TVCLTS
Trigger: GGAGGTCAGACACACTGTCCAGAGGCAGAACTGAAG...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTACATTGAAACCCTCATaGGTTGTATTGGGGAACCTC +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPTLKPS*VVLGNL
Trigger: GAGGTTCCCCAATACAACTCATGAGGGTTTCAATGT...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCGTACCACTTGTTGGTaGGAGTTTTCATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLRTTCW*EFSSGC
Trigger: GCATCCAGATGAAAACTCTCACCAACAAGTGGTACG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAAAGCAGGAATGCACATaGTCAGCCCAGGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRKQECT*SAQGPC
Trigger: GCATGGACCCTGGGCTGATCATGTGCATTCCTGCTT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGGCTATCACACCTGGTaGCGAGGGGGCAGACGGAAA +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGGYHTW*RGGRRK
Trigger: TTTCCGTCTGCCCCCTCGTCACCAGGTGTGATAGCC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCTTTTGTTACCAAGGTaGGCCAAGATTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPLLLPR*AKIAKE
Trigger: TTCCTTGGCAATCTTGGCTCACCTTGGTAACAAAAG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGAGGACTCTGCTTCATaGCTCCGCATCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGREDSAS*LRIRKL
Trigger: GAGCTTCCTGATGCGGAGTCATGAAGCAGAGTCCTC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGTCATGCCGCTGGACTaGTCCTCTTGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKVMPLD*SSCWAC
Trigger: GCAGGCCCAGCAAGAGGAGCAGTCCAGCGGCATGAC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGTGCGGAGGGTCTGCTaGATGAGGATCTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLVRRVC*MRIWVT
Trigger: AGTCACCCAGATCCTCATGCAGCAGACCCTCCGCAC...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAGGATTTCTGGGCCCTaGCACTTAGGTCAGAATTGT +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLRISGP*HLGQNC
Trigger: ACAATTCTGACCTAAGTGGCAGGGCCCAGAAATCCT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCTGCTGCATGAGGATCTaGGTGACTGGGGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCCCMRI*VTGERL
Trigger: TAACCTCTCCCCAGTCACCCAGATCCTCATGCAGCA...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGTGAGAGTTTTCATCTaGATGCGCCCGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGVRVFI*MRPWCR
Trigger: CCTGCACCACGGGCGCATCCAGATGAAAACTCTCAC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGAGGCCTGTCAGGTTCTaGACTAAGGCGACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGRPVRF*TKATLQ
Trigger: CTGCAGAGTCGCCTTAGTCCAGAACCTGACAGGCCT...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGGGTTTTCAGGATTTCTaGGCCCTGCCACTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLGFQDF*ALPLRS
Trigger: TGACCTAAGTGGCAGGGCCCAGAAATCCTGAAAACC...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCACCACATACGGAAGTTaGCAATGGCTCTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVTTYGS*QWLFDE
Trigger: CTCATCAAAGAGCCATTGCCAACTTCCGTATGTGGT...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGCTGAGGTGGAAGAGATaGAGATGTGCTTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLLRWKR*RCACSS
Trigger: GCTAGAGCAAGCACATCTCCATCTCTTCCACCTCAG...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCCTCTTGCAGCTCACTTaGGGGAGAAAAATGAGTAAG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVLLQLT*GRKMSK
Trigger: CTTACTCATTTTTCTCCCCCAAGTGAGCTGCAAGAG...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGTCCCTCCGTCTCAGTaGCCCGAGGGTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKVPPSQ*PEGGRK
Trigger: CTTTCTCCCACCCTCGGGCCACTGAGACGGAGGGAC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417961.5
CDS-3UTR TCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCGAAGATGGCAGCAGTaGGCAGACACTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKRRWQQ*ADTAGP
Trigger: AGGCCCTGCAGTGTCTGCTCACTGCTGCCATCTTCG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGAAGCAGGAATGCACATaGTCAGCCCAGGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLKQECT*SAQGPC
Trigger: GCATGGACCCTGGGCTGATCATGTGCATTCCTGCTT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCAACTTCAGGGGAGAGTaGGTTCTGGCAGGGGTGCGA +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGNFRGE*VLAGVR
Trigger: TCGCACCCCTGCCAGAACTCACTCTCCCCTGAAGTT...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGAGGACTCTGCTTCATaGCTCCGCATCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLEDSAS*LRIRKL
Trigger: GAGCTTCCTGATGCGGAGTCATGAAGCAGAGTCCTC...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCAAGCTTCGTCATTTTaGGGACGATTCAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPQASSF*GRFKIC
Trigger: GCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGCTTGGGGGAGAAAAATaGGTAAGTCTGGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLLGGEK*VSLAFI
Trigger: TATGAAGGCCAGACTTACTCATTTTTCTCCCCCAAG...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGTTCCTCAAGTCAATATaGTTCAGCACTAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: ASATLLRTLQACAPCGNTFLKSI*FSTNAE
Trigger: TTCTGCATTAGTGCTGAAGCATATTGACTTGAGGAA...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCAGTGGGACATCACGATaGCTGAGAAAAGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCSGTSR*LRKGWP
Trigger: TGGCCATCCTTTTCTCAGGCATCGTGATGTCCCACT...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCCGTCCTTCTTGTTCCTaGGGTGTGCCTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGRPSCS*GVPWRP
Trigger: AGGACGCCAAGGCACACCGCAGGAACAAGAAGGACG...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGACCGACTCCACAGTGTTaGCCATCTTCTCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRPTPQC*PSSQSC
Trigger: GCAAGACTGAGAAGATGGGCAACACTGTGGAGTCGG...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGAGTTCTGGCAGGGGTaGGAGAACAATCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGREFWQG*ENNLVS
Trigger: TGAGACCAGATTGTTCTCGCACCCCTGCCAGAACTC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAAGAGGGCTTCAGTTCTaGCTCTGGACAGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRRGLQF*LWTVCL
Trigger: CAGACACACTGTCCAGAGGCAGAACTGAAGCCCTCT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGCCTTCCCGAGGACTCTaGTTCATGACTCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLPSRGL*FMTPHQ
Trigger: CTGATGCGGAGTCATGAAGCAGAGTCCTCGGGAAGG...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCGAGATGAGGAGAGGATaGGAGTCATTCCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCEMRRG*ESFHLD
Trigger: GTCCAGATGGAATGACTCCCATCCTCTCCTCATCTC...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGACCACATACGGAAGTTaGCAATGGCTCTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLTTYGS*QWLFDE
Trigger: CTCATCAAAGAGCCATTGCCAACTTCCGTATGTGGT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGAGGCTGCAGAAAGCATaGGATTCATTCCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLRLQKA*DSFQEL
Trigger: GAGTTCTTGGAATGAATCCCATGCTTTCTGCAGCCT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTCTTTCAGCATTCCATaGCACACAAAGGAATCCTGT +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPSFSIP*HTKESC
Trigger: ACAGGATTCCTTTGTGTGCCATGGAATGCTGAAAGA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCTTGCAGATCCTTACTTaGAGAAACCGTCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVLQILT*RNRQSL
Trigger: AAGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAA...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGCACCAGTTTCGTCGTaGCAACCAGGGTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKAPVSS*QPGWCG
Trigger: TCCACACCACCCTGGTTGTCACGACGAAACTGGTGC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAAGCACGGGGTCCACATaGAGTGCATTGAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRSTGST*SALKMA
Trigger: TGCCATTTTCAATGCACTTCATGTGGACCCCGTGCT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGACATCATCTTCGGTGTaGTTTTATGATCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KGILWANLGDSGAQAYPLTSSSV*FYDPGR
Trigger: TCTTCCGGGATCATAAAATCACACCGAAGATGATGT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGGAGGAGTCGGGAGATaGCAGTTTCCCAAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGGGVGR*QFPKKS
Trigger: CGACTTCTTGGGAAACTGTCATCTCCCGACTCCTCC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGTCGTCAAAGGGGAGATaGGGAGAGGATGGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLSSKGR*GEDGSH
Trigger: ATGACTCCCATCCTCTCCTCATCTCCCCTTTGACGA...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGACGGAAATGGGATCTaGCTCTTTTCATTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPDGNGI*LFSLLY
Trigger: ATAAAGCAATGAAAAGAGTCAGATCCCATTTCCGTC...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGAGCCTTCACTCATCCTaGAGTATTCCTCCTACACGC +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGSLHSS*SIPPTR
Trigger: GCGTGTAGGAGGAATACTTCAGGATGAGTGAAGGCT...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGATCTGGACAGTGTGTCTaGCCTCCAGATGATGGAACT +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRSGQCV*PPDDGT
Trigger: AGTTCCATCATCTGGAGGTCAGACACACTGTCCAGA...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAAGTGGGACATCACGATaGCTGAGAAAAGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRSGTSR*LRKGWP
Trigger: TGGCCATCCTTTTCTCAGGCATCGTGATGTCCCACT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCTTGTTCCTGCGGTGTaGCTTGGCGTCCTCGATGTC +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKLVPAV*LGVLDV
Trigger: GACATCGAGGACGCCAAGGCACACCGCAGGAACAAG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCCTGCTGAGTGTCTGTaGGCAGCAAACGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKPAECL*AANAHP
Trigger: AGGATGGGCGTTTGCTGCGCACAGACACTCAGCAGG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCATAACAACTACAGGCTaGAGAAAGCATGGGATTCAT +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVITTTG*RKHGIH
Trigger: ATGAATCCCATGCTTTCTGCAGCCTGTAGTTGTTAT...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGCAGTGGCTGGGGAATaGCACAACTGTAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGAVAGE*HNCRWC
Trigger: GCACCATCTACAGTTGTGCCATTCCCCAGCCACTGC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGAGGGCCTCAGCACAGTaGCCTCCGATTAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLRASAQ*PPIRQK
Trigger: CTTTTGTCTAATCGGAGGCCACTGTGCTGAGGCCCT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGAGATGAGGAGAGGATaGGAGTCATTCCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGEMRRG*ESFHLD
Trigger: GTCCAGATGGAATGACTCCCATCCTCTCCTCATCTC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCGGGGGCAGACGGAAATaGGATCTGACTCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCGGRRK*DLTLFI
Trigger: AATGAAAAGAGTCAGATCCCATTTCCGTCTGCCCCC...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGTGCTGGCTAAAGGGCTaGTTTCCTCCAGCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKCWLKG*FPPALP
Trigger: AGGGAGCGCTGGAGGAAACCAGCCCTTTAGCCAGCA...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCAAGGGCAGCAAACACTaGCTCTCACTCGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGKGSKH*LSLGRE
Trigger: TTCCCTGCCGAGTGAGAGCCAGTGTTTGCTGCCCTT...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCTCAATGTCTAACTGTTaGACAACTGTTTGGGAAACG +
Preference number: 4 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVSMSNC*TTVWET
Trigger: CGTTTCCCAAACAGTTGTCCAACAGTTAGACATTGA...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 72 bp GGAAGTTGGCAATGGCTCTTTGATGAGCTGAGCAGTTaGAGGCTCGTCAAAGGGGAGATGAGGAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: GSWQWLFDELSS*RLVKGEMRRGW
Trigger: CCATCCTCTCCTCATCTCCCCTTTGACGAGCCTCAAACTGCTCAGCTCATCAAAGAGCCATTGCCAACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTGCTGAGGAGCCACACTaGGCGGAGGCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRAEEPH*AEAGSG
Trigger: CCCTGAGCCAGCCTCCGCTCAGTGTGGCTCCTCAGC...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCAAGAGGATGGAACCCTaGCTAGCAGCGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGKRMEP*LAAKMA
Trigger: TGCCATCTTCGCTGCTAGTCAGGGTTCCATCCTCTT...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCCTTTTGTTACCAAGGTaGGCCAAGATTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCLLLPR*AKIAKE
Trigger: TTCCTTGGCAATCTTGGCTCACCTTGGTAACAAAAG...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGGACTAAGGCGACTCTaGAGCCAGTACCTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWGLRRL*SQYLAP
Trigger: CGGGGCGAGGTACTGGCTGCAGAGTCGCCTTAGTCC...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCAGAGGGCTTCAGTTCTaGCTCTGGACAGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGRGLQF*LWTVCL
Trigger: CAGACACACTGTCCAGAGGCAGAACTGAAGCCCTCT...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGAGGATCTGGGTGACTaGGGAGAGGTTATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKEDLGD*GEVMVR
Trigger: ACGCACCATAACCTCTCCCCAGTCACCCAGATCCTC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTGAGCCGGAGGGGCCCTaGCGTACCTCCTCGTACCAC +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNREPEGP*RTSSYH
Trigger: GTGGTACGAGGAGGTACGCCAGGGCCCCTCCGGCTC...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAGAGCCGGAGGGGCCCTaGCGTACCTCCTCGTACCAC +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWREPEGP*RTSSYH
Trigger: GTGGTACGAGGAGGTACGCCAGGGCCCCTCCGGCTC...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCCTTCAGTTCTGCCTCTaGACAGTGTGTCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGLQFCL*TVCLTS
Trigger: GGAGGTCAGACACACTGTCCAGAGGCAGAACTGAAG...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGAAGGGCAGCAAACACTaGCTCTCACTCGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKKGSKH*LSLGRE
Trigger: TTCCCTGCCGAGTGAGAGCCAGTGTTTGCTGCCCTT...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCAACCGTCAAAGCCTTTaGTGTAAGCCAGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGNRQSL*CKPGHA
Trigger: GGCATGGCCTGGCTTACACCAAAGGCTTTGACGGTT...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCACATCATCTTCGGTGTaGTTTTATGATCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCTSSSV*FYDPGR
Trigger: TCTTCCGGGATCATAAAATCACACCGAAGATGATGT...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGGCTATCACACCTGGTaGCGAGGGGGCAGACGGAAA +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWGYHTW*RGGRRK
Trigger: TTTCCGTCTGCCCCCTCGTCACCAGGTGTGATAGCC...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTTCACTCCGAAGCCAGTaGAGCCCCCGCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRSLRSQ*SPRRAA
Trigger: GGCTGCTCTGCGGGGGCTTCACTGGCTTCGGAGTGA...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCGCAGGGCTGGCAGCTaGCTTTTGACCACGGATGCA +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWRRAGS*LLTTDA
Trigger: TGCATCCGTGGTCAAAAGTCAGCTGCCAGCCCTGCG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCTACAAAAGCGGAGATTaGCGTCCCAAAAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCYKSGD*RPKNSK
Trigger: TTTGCTGTTTTTGGGACGGCAATCTCCGCTTTTGTA...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGACGGTGCGGAGGGTCTaGTGCATGAGGATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWTVRRV*CMRIWV
Trigger: CACCCAGATCCTCATGCAGCAGACCCTCCGCACCGT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAAATGTTTACCGCTCTaGCAAATAGTACAAGCACTA +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLKCLPL*QIVQAL
Trigger: TAGTGCTTGTACTATTTGGCAGAGCGGTAAACATTT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGGATGCACGCATCTCTaGGAGGCCCCTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWGCTHL*EAPAEC
Trigger: ACACTCAGCAGGGGCCTCGCAGAGATGCGTGCATCC...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGAGTTCTGGCAGGGGTaGGAGAACAATCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKEFWQG*ENNLVS
Trigger: TGAGACCAGATTGTTCTCGCACCCCTGCCAGAACTC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCAAGCATGTGCGCCCTaGGGGAACACGGACCTGAGA +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWQACAP*GNTDLR
Trigger: TCTCAGGTCCGTGTTCCCGCAGGGCGCACATGCTTG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGACCCACACCCCAGCCTaGCCCATCCTCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWTHTPA*PILSRS
Trigger: ACTTCTGCTGAGGATGGGGCAGGCTGGGGTGTGGGT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGGGACGATTCAAGATTTaGAGATCCTTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLGRFKI*RSLLGE
Trigger: TTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCC...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCTTAGGTCAGAATTGTaGCTGCAGAGGCATCTTGAT +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGLRSEL*LQRHLD
Trigger: ATCAAGATGCCTCTGCAGCCACAATTCTGACCTAAG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGTTGGGGACCCTAGCATaGGTGACGAATGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKLGTLA*VTNGIQ
Trigger: TTGGATCCCATTCGTCACCCATGCTAGGGTCCCCAA...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAAGTTCTCCTGTACCATaGCCTAGACCCAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRSSPVP*PRPRRK
Trigger: TTTTCTTCTGGGTCTAGGCCATGGTACAGGAGAACT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGGACATCACGATGCCTaGGAAAAGGATGGCCATGAT +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKGHHDA*EKDGHD
Trigger: ATCATGGCCATCCTTTTCTCAGGCATCGTGATGTCC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTTGGTGGTGGTGCCGATaGGCTGCCGCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRWWWCR*AAASPW
Trigger: CCATGGAGAAGCGGCAGCTCATCGGCACCACCACCA...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCAGACAAAAGAACAACTaGGTACGGGAATGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGRQKNN*VREWWG
Trigger: TCCCCACCATTCCCGTACTCAGTTGTTCTTTTGTCT...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGTATCGGATCAGTAAATaGACCAATATGATGCAGATA +
Preference number: 4 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLYRISK*TNMMQI
Trigger: TATCTGCATCATATTGGTGCATTTACTGATCCGATA...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGGGGTCCACATGAAGTaGATTGAAAATGGCAATAGT +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGGVHMK*IENGNS
Trigger: ACTATTGCCATTTTCAATGCACTTCATGTGGACCCC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGGCTTGTAAAAATGTTTaGCACCCACTGACATCTGAC +
Preference number: 4 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGACKNV*HPLTSD
Trigger: GTCAGATGTCAGTGGGTGGCAAACATTTTTACAAGC...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTTGCTGCTCTGGCCCCTaGCCCAGTGCTTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVICCSGP*PSALGT
Trigger: GGTCCCCAAAGCACTGGGGCAGGGGCCAGAGCAGCA...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCCTGGCCCATCCCCCTaGACACTTATCTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRPGPSP*TLISGT
Trigger: GGTCCCCGAGATAAGTGTGCAGGGGGATGGGCCAGG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTAGGCCATGCCCACCATaGAGGTGGAAGCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRRPCPP*RWKQGG
Trigger: GCCTCCCTGCTTCCACCTGCATGGTGGGCATGGCCT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGAACCTTCAGCTGTGTTaGTCAGAACAATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLNLQLC*SEQWRL
Trigger: CAGTCTCCATTGTTCTGACCAACACAGCTGAAGGTT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAATCTGGATGCGCCCGTaGTGCAGGTCCTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRIWMRP*CRSSCV
Trigger: GACGCAGGAGGACCTGCACCACGGGCGCATCCAGAT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGGTTCCAAGGCTCCCTaGGACCCAGAACCACATACG +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWGSKAP*DPEPHT
Trigger: CGTATGTGGTTCTGGGTCCCAGGGAGCCTTGGAACC...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGGGGGCAGACGGAAATaGGATCTGACTCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGGGRRK*DLTLFI
Trigger: AATGAAAAGAGTCAGATCCCATTTCCGTCTGCCCCC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAGCAGGACCCGCTTTTaGTTCCGGCTTCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRSRTRF*FRLPLE
Trigger: CTCCAGCGGAAGCCGGAAGCAAAAGCGGGTCCTGCT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTTGGTGCAGGTCCTCCTaGGTCAGCCTCCGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRWCRSS*VSLRVK
Trigger: CTTCACTCGGAGGCTGACGCAGGAGGACCTGCACCA...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACAAGCATGTGCGCCCTaGGGGAACACGGACCTGAGA +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRQACAP*GNTDLR
Trigger: TCTCAGGTCCGTGTTCCCGCAGGGCGCACATGCTTG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGGACGATTCAAGATTTaGAGATCCTTACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRGRFKI*RSLLGE
Trigger: TTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCTAACAGGGGCCTCTTaGAGCTCACTTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWLTGAS*SSLGGE
Trigger: TTCTCCCCCAAGTGAGCTGCAAGAGGCCCCTGTTAG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGAGGCCTGTCAGGTTCTaGACTAAGGCGACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWRPVRF*TKATLQ
Trigger: CTGCAGAGTCGCCTTAGTCCAGAACCTGACAGGCCT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGTTGCAGATCCTTACTTaGAGAAACCGTCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ATASFSSLSSKCEARCDLLQILT*RNRQSL
Trigger: AAGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAA...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 72 bp CAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTaGTGGGCCGGCAGAAACCCTGTGCCTCTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QHFAVKCKSRQQ*WAGRNPVPLAF
Trigger: AAAAGCTAGAGGCACAGGGTTTCTGCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCTTCGGTGTGATTTTATaGTCCCGGAAGAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGFGVIL*SRKKFR
Trigger: CCTGAATTTCTTCCGGGATCATAAAATCACACCGAA...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCGCCCTCTTATGTCTTaGAGGGGCTGCTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRRPLMS*RGCWMH
Trigger: GTGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTGAACCTGGAAGGTCCTaGGGTCAGTCCCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNREPGRS*GQSLLT
Trigger: TGTCAGGAGGGACTGACCTCAGGACCTTCCAGGTTC...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTTTGGCTGGCCTGCTCTaGCTTCAGGGTCAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVILAGLL*LQGQGE
Trigger: CTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAA...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCCAGCTCACCCACTGTaGAGAGGGGTGGCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIPAHPL*RGVAGL
Trigger: TAAGCCAGCCACCCCTCTTCACAGTGGGTGAGCTGG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGCGGGAACACGGACCTaGGACTTCATGAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIAGTRT*DFMRPS
Trigger: GCTTGGCCTCATGAAGTCTCAGGTCCGTGTTCCCGC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCTATCGGATCAGTAAATaGACCAATATGATGCAGATA +
Preference number: 4 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCYRISK*TNMMQI
Trigger: TATCTGCATCATATTGGTGCATTTACTGATCCGATA...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCGCTTGTAAAAATGTTTaGCACCCACTGACATCTGAC +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGACKNV*HPLTSD
Trigger: GTCAGATGTCAGTGGGTGGCAAACATTTTTACAAGC...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGAGATGGAGATGTGCTTaGTCTAGCCCAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWRWRCA*SSPGSM
Trigger: CATGGACCCTGGGCTAGAGCAAGCACATCTCCATCT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACTGTGGTGGAGGGGCTaGTGGCTAAAGGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRLWWRG*WLKGWF
Trigger: AAACCAGCCCTTTAGCCAGCAGCCCCTCCACCACAG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGACTCTCCAAGCATGTaGGCCCTGCGGGAACACGGA +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIDSPSM*ALREHG
Trigger: TCCGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAGCTTCACAGATGACTaGCACCTGGCCCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRSFTDD*HLAPCS
Trigger: GGAGCATGGGGCCAGGTGCCAGTCATCTGTGAAGCT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCTCTTTCAGCATTCCATaGCACACAAAGGAATCCTGT +
Preference number: 4 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGSFSIP*HTKESC
Trigger: ACAGGATTCCTTTGTGTGCCATGGAATGCTGAAAGA...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCGGCAGGAGACTAAATaGAAGGGGGCTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWRQETK*KGAGSL
Trigger: TAAAGAGCCAGCCCCCTTCCATTTAGTCTCCTGCCG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGTTCGGTGTGATTTTATaGTCCCGGAAGAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKFGVIL*SRKKFR
Trigger: CCTGAATTTCTTCCGGGATCATAAAATCACACCGAA...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCTTGTTCCTGCGGTGTaGCTTGGCGTCCTCGATGTC +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVILVPAV*LGVLDV
Trigger: GACATCGAGGACGCCAAGGCACACCGCAGGAACAAG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCCTGCTGAGTGTCTGTaGGCAGCAAACGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIPAECL*AANAHP
Trigger: AGGATGGGCGTTTGCTGCGCACAGACACTCAGCAGG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCCTTCCCGAGGACTCTaGTTCATGACTCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRPSRGL*FMTPHQ
Trigger: CTGATGCGGAGTCATGAAGCAGAGTCCTCGGGAAGG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAGAGGATCTGGGTGACTaGGGAGAGGTTATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWREDLGD*GEVMVR
Trigger: ACGCACCATAACCTCTCCCCAGTCACCCAGATCCTC...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCCATCTGGACATGACTaGCAGCTCCTCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRPSGHD*QLLTLR
Trigger: TCTCAGGGTGAGGAGCTGCCAGTCATGTCCAGATGG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAGGGGAGAGTGAGTTCTaGCAGGGGTGCGAGAACAAT +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRGESEF*QGCENN
Trigger: ATTGTTCTCGCACCCCTGCCAGAACTCACTCTCCCC...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCTTACATCTGGGAGATaGGACCCTAAACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWLTSGR*DPKLQG
Trigger: CCCCTGAAGTTTAGGGTCCCATCTCCCAGATGTAAG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTACACAAGCCACGGGGTaGTTGTTCCGAGGGGTCATA +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRTQATG*LFRGVI
Trigger: TATGACCCCTCGGAACAACCACCCCGTGGCTTGTGT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCTGGTTCCGCAGGGCTaGCAGCTGACTTTTGACCAC +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVILVPQG*QLTFDH
Trigger: GTGGTCAAAAGTCAGCTGCCAGCCCTGCGGAACCAG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGAGAAAAGGATGGCCATaGTGCCTGAGAGTGAGATTC +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWRKGWP*CLRVRF
Trigger: GAATCTCACTCTCAGGCATCATGGCCATCCTTTTCT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTAAGAGGATGGAACCCTaGCTAGCAGCGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRKRMEP*LAAKMA
Trigger: TGCCATCTTCGCTGCTAGTCAGGGTTCCATCCTCTT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGGACGGAAATGGGATCTaGCTCTTTTCATTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKDGNGI*LFSLLY
Trigger: ATAAAGCAATGAAAAGAGTCAGATCCCATTTCCGTC...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCCGACTCCACAGTGTTaGCCATCTTCTCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRPTPQC*PSSQSC
Trigger: GCAAGACTGAGAAGATGGGCAACACTGTGGAGTCGG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGAGGATTTCTGGGCCCTaGCACTTAGGTCAGAATTGT +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWRISGP*HLGQNC
Trigger: ACAATTCTGACCTAAGTGGCAGGGCCCAGAAATCCT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTAGAGCAGCACATCACTaGTCAGGAAACAGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: FVILRTIQDLQILTWRNRRAAHH*SGNRGL
Trigger: TAGGCCCCTGTTTCCTGAGCAGTGATGTGCTGCTCT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAACAACCAGGGTGGTGTaGAGGGTGACATTGAAACCC +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRTTRVV*RVTLKP
Trigger: GGGTTTCAATGTCACCCTCCACACCACCCTGGTTGT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGTGAGAGTTTTCATCTaGATGCGCCCGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIVRVFI*MRPWCR
Trigger: CCTGCACCACGGGCGCATCCAGATGAAAACTCTCAC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACACAAAGGAATCCTGTaGGCTAACCTGGGCGACTCT +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRHKGIL*ANLGDS
Trigger: AGAGTCGCCCAGGTTAGCCCACAGGATTCCTTTGTG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCAAAGACCAGCATGTTaGGCACGGGGTCCACATGAA +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIQRPAC*ARGPHE
Trigger: TTCATGTGGACCCCGTGCTCAACATGCTGGTCTTTG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGATCTGGACAGTGTGTCTaGCCTCCAGATGATGGAACT +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRSGQCV*PPDDGT
Trigger: AGTTCCATCATCTGGAGGTCAGACACACTGTCCAGA...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTACAACCAGGGTGGTGTaGAGGGTGACATTGAAACCC +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVITTRVV*RVTLKP
Trigger: GGGTTTCAATGTCACCCTCCACACCACCCTGGTTGT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTTGCTGCATGAGGATCTaGGTGACTGGGGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVICCMRI*VTGERL
Trigger: TAACCTCTCCCCAGTCACCCAGATCCTCATGCAGCA...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACTTACATCTGGGAGATaGGACCCTAAACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRLTSGR*DPKLQG
Trigger: CCCCTGAAGTTTAGGGTCCCATCTCCCAGATGTAAG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGAGGCTGCAGAAAGCATaGGATTCATTCCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWRLQKA*DSFQEL
Trigger: GAGTTCTTGGAATGAATCCCATGCTTTCTGCAGCCT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAGAAAAGGATGGCCATaGTGCCTGAGAGTGAGATTC +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRRKGWP*CLRVRF
Trigger: GAATCTCACTCTCAGGCATCATGGCCATCCTTTTCT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCACTATGCACCAGATaGCAAAGGAAATTTCAAACT +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWALCTR*QRKFQT
Trigger: AGTTTGAAATTTCCTTTGTCATCTGGTGCATAGTGC...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCGTACCACTTGTTGGTaGGAGTTTTCATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIRTTCW*EFSSGC
Trigger: GCATCCAGATGAAAACTCTCACCAACAAGTGGTACG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACTTGGGGGAGAAAAATaGGTAAGTCTGGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRLGGEK*VSLAFI
Trigger: TATGAAGGCCAGACTTACTCATTTTTCTCCCCCAAG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGTCAATGTCTAACTGTTaGACAACTGTTTGGGAAACG +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWSMSNC*TTVWET
Trigger: CGTTTCCCAAACAGTTGTCCAACAGTTAGACATTGA...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGACTCTTGCAGCTCACTTaGGGGAGAAAAATGAGTAAG +
Preference number: 4 (lower is better)
Translates to: SSFVILRTIQDLQILTWRLLQLT*GRKMSK
Trigger: CTTACTCATTTTTCTCCCCCAAGTGAGCTGCAAGAG...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
3UTR CAA 72 bp CACATCCATCTTGAGGACAATTCAAGCTTCGTCATTTaGAGGACGATTCAAGATTTGCAGATCCTTACTTGG +
Preference number: 4 (lower is better)
Translates to: HIHLEDNSSFVI*RTIQDLQILTW
Trigger: CCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGAATTGTCCTCAAGATGGATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGTTCCTCAAGTCAATATaGTTCAGCACTAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWFLKSI*FSTNAE
Trigger: TTCTGCATTAGTGCTGAAGCATATTGACTTGAGGAA...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGAAATGTTTACCGCTCTaGCAAATAGTACAAGCACTA +
Preference number: 4 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWKCLPL*QIVQAL
Trigger: TAGTGCTTGTACTATTTGGCAGAGCGGTAAACATTT...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTACTTTTGACCACGGATaGACATCTTCCCATCCAATC +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVITFDHG*TSSHPI
Trigger: GATTGGATGGGAAGATGTGCATCCGTGGTCAAAAGT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTAACCTTCAGCTGTGTTaGTCAGAACAATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVINLQLC*SEQWRL
Trigger: CAGTCTCCATTGTTCTGACCAACACAGCTGAAGGTT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTAGTTCTCCTGTACCATaGCCTAGACCCAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVISSPVP*PRPRRK
Trigger: TTTTCTTCTGGGTCTAGGCCATGGTACAGGAGAACT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCAAGCTTCGTCATTTTaGGGACGATTCAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIQASSF*GRFKIC
Trigger: GCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTTACAAAAGCGGAGATTaGCGTCCCAAAAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIYKSGD*RPKNSK
Trigger: TTTGCTGTTTTTGGGACGGCAATCTCCGCTTTTGTA...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR TCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTGCACTATGCACCAGATaGCAAAGGAAATTTCAAACT +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIALCTR*QRKFQT
Trigger: AGTTTGAAATTTCCTTTGTCATCTGGTGCATAGTGC...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR GCA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTATAACAACTACAGGCTaGAGAAAGCATGGGATTCAT +
Preference number: 4 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIITTTG*RKHGIH
Trigger: ATGAATCCCATGCTTTCTGCAGCCTGTAGTTGTTAT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS GCA 90 bp CAGGACCACCGAGTTCGGAGCCGCGGGGCTAGCAGGACCCGCTTTTaGTTCCGGCTTCCGCTGGAGGCGCGGGCGGGCGAGCGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: QDHRVRSRGASRTRF*FRLPLEARAGEREA
Trigger: CGCCTCCCGCTCGCCCGCCCGCGCCTCCAGCGGAAGCCGGAAGCAAAAGCGGGTCCTGCTAGCCCCGCGGCTCCGAACTCGGTGGTCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417961.5
CDS CCA 90 bp GGGGCCTCGGCCGCGCGAGGGCGGCCCTCTGTCCCTCCGTCTCAGTaGCCCGAGGGTGGGAGAAAGCGCGTGGGAGGATTGCTTCTTAGT +
Preference number: 5 (lower is better)
Translates to: GASAARGRPSVPPSQ*PEGGRKRVGGLLLS
Trigger: ACTAAGAAGCAATCCTCCCACGCGCTTTCTCCCACCCTCGGGCCACTGAGACGGAGGGACAGAGGGCCGCCCTCGCGCGGCCGAGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417961.5
CDS TCA 90 bp TCCTCCGTGAGCTCCGACAGGTGCTCCGACTCCACAGTGTTGCCCTaGGCAGGGAGGAAAGGCGGCCCGACGGCCACCAGCTGGCACCAT +
Preference number: 5 (lower is better)
Translates to: SSVSSDRCSDSTVLP*AGRKGGPTATSWHH
Trigger: ATGGTGCCAGCTGGTGGCCGTCGGGCCGCCTTTCCTCCCTGCTCAGGGCAACACTGTGGAGTCGGAGCACCTGTCGGAGCTCACGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS-3UTR CAA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGGGGTGCCCTCATCTCTaGGGGGCACTCTCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ASATLLRTLQACAPCGNTGCPHL*GALSQA
Trigger: AGCCTGGGAGAGTGCCCCCAAGAGATGAGGGCACCC...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS TCA 90 bp CTGAGTGTCTGTGCGCAGCAAACGCCCATCCTGGGCCTGCCTGCCTaGAGCCTTGGCACCTGGCGTCAGAGCAGCTCCTGCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LSVCAQQTPILGLPA*SLGTWRQSSSCSSS
Trigger: GGACGACGAGCAGGAGCTGCTCTGACGCCAGGTGCCAAGGCTTCAGGCAGGCAGGCCCAGGATGGGCGTTTGCTGCGCACAGACACTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS GCA 90 bp CCCAGGCCGCCAGTGTCCCCAACCCTAACTCCACTTGACCATCAATaGAGGGTGACGGGCAGCAGACGGCCTCCTGGGAGCCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PRPPVSPTLTPLDHQ*RVTGSRRPPGSLQG
Trigger: TCCCTGCAGGCTCCCAGGAGGCCGTCTGCTGCCCGTCACCCTGCATTGATGGTCAAGTGGAGTTAGGGTTGGGGACACTGGCGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS TCA 90 bp CGGAGCCGGAGGGGCCCTGGCGTACCTCCTCGTACCACTTGTTGGTaGGAGTTTTCATCTGGATGCGCCCGTGGTGCAGGTCCTCCTGCG +
Preference number: 5 (lower is better)
Translates to: RSRRGPGVPPRTTCW*EFSSGCARGAGPPA
Trigger: CGCAGGAGGACCTGCACCACGGGCGCATCCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGGCCCCTCCGGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS-3UTR CAA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTGCCTGCCTGAAGCCTaGGCACCTGGCGTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPCLPEA*APGVRA
Trigger: TGCTCTGACGCCAGGTGCCAAGGCTTCAGGCAGGCA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS CCA 90 bp CGTCAGAGCAGCTCCTGCTCGTCGTCCTCGGAGCCGGAGGGGCCCTaGCGTACCTCCTCGTACCACTTGTTGGTGAGAGTTTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: RQSSSCSSSSEPEGP*RTSSYHLLVRVFIW
Trigger: CCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGGCCCCTCCGGCTCCGAGGACGACGAGCAGGAGCTGCTCTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS-3UTR CAA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAACGGGGAGGATGGGCTaGCCAGGGGTCGGGAGCACC +
Preference number: 5 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRTGRMG*PGVGST
Trigger: GGTGCTCCCGACCCCTGGCAAGCCCATCCTCCCCGT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGGATGAGCTGAGCAGTTaGAGGCTCGTCAAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: ASATLLRTLQACAPCGNTDELSS*RLVKGE
Trigger: CTCCCCTTTGACGAGCCTCAAACTGCTCAGCTCATC...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGGGGTGCCCTCATCTCTaGGGGGCACTCTCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLGCPHL*GALSQA
Trigger: AGCCTGGGAGAGTGCCCCCAAGAGATGAGGGCACCC...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GAACAATCTGGTCTCAGATCCCTGCCCGCACTCGCCCAGGGGCAGGCAAAGGTCCCTAACAGGGGCCTCTaGCAGCTCACTTGGGGGAGA +
Preference number: 5 (lower is better)
Translates to: EQSGLRSLPALAQGQAKVPNRGL*QLTWGR
Trigger: TCTCCCCCAAGTGAGCTGCAAGAGGCCCCTGTTAGG...GACCTTTGCCTGCCCCTGGGCGAGTGCGGGCAGGGATCTGAGACCAGATTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS GCA 90 bp AGGATGGTGAAGAGCACGATGACGATGGTGGTGGTGCCGATGAGCTaGCGCTTCTCCATGGGCTCCAGGTCCAGGTGTAGGCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RMVKSTMTMVVVPMS*RFSMGSRSRCRLRA
Trigger: TGCCCTGAGCCTACACCTGGACCTGGAGCCCATGGAGAAGCGGCAGCTCATCGGCACCACCACCATCGTCATCGTGCTCTTCACCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS GCA 90 bp TGGGAGCCTGCAGGGAGGCAGGAACGTCCATCAGGGCACAATGGATaGCCAGGACCCCACCTAGGACAGCTAAAACAGAAGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: WEPAGRQERPSGHNG*PGPHLGQLKQKDWA
Trigger: GGCCCAGTCCTTCTGTTTTAGCTGTCCTAGGTGGGGTCCTGGGCATCCATTGTGCCCTGATGGACGTTCCTGCCTCCCTGCAGGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS CCA 90 bp CCCTGGCGTACCTCCTCGTACCACTTGTTGGTGAGAGTTTTCATCTaGATGCGCCCGTGGTGCAGGTCCTCCTGCGTCAGCCTCCGAGTG +
Preference number: 5 (lower is better)
Translates to: PWRTSSYHLLVRVFI*MRPWCRSSCVSLRV
Trigger: CACTCGGAGGCTGACGCAGGAGGACCTGCACCACGGGCGCATCCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS-3UTR CAA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGTCCGACTCCACAGTGTaGCCCATCTTCTCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: ASATLLRTLQACAPCGNTSDSTV*PIFSVL
Trigger: CAAGACTGAGAAGATGGGCAACACTGTGGAGTCGGA...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCTGCATGTGAAATCCTaGTCAGTGGCAGCAAACGGC +
Preference number: 5 (lower is better)
Translates to: ASATLLRTLQACAPCGNTLHVKS*SVAANG
Trigger: GCCGTTTGCTGCCACTGACAAGGATTTCACATGCAG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS CCA 90 bp CTCCTGGGAGCCTGCAGGGAGGCAGGAACGTCCATCAGGGCACAATaGATGCCCAGGACCCCACCTAGGACAGCTAAAACAGAAGGACTG +
Preference number: 5 (lower is better)
Translates to: LLGACREAGTSIRAQ*MPRTPPRTAKTEGL
Trigger: CAGTCCTTCTGTTTTAGCTGTCCTAGGTGGGGTCCTGGGCATCCATTGTGCCCTGATGGACGTTCCTGCCTCCCTGCAGGCTCCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS-3UTR CAA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGCTGGACTGCTCCTCTaGCTGGGCCTGCTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRAGLLL*LGLLPC
Trigger: ACAGGGGAGCAGGCCCAGCAAGAGGAGCAGTCCAGC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGTCAGTCTTGCTGAGGTaGACGTCCTTCTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: ASATLLRTLQACAPCGNTSVLLR*TSFLFL
Trigger: CAGGAACAAGAAGGACGTCAACCTCAGCAAGACTGA...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCTCCTCGTACCACTTGTaGGTGAGAGTTTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSSSYHL*VRVFIW
Trigger: CCAGATGAAAACTCTCACCAACAAGTGGTACGAGGA...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCCACTTAGGTCAGAATaGTGGCTGCAGAGGCATCTT +
Preference number: 5 (lower is better)
Translates to: ASATLLRTLQACAPCGNTPLRSE*WLQRHL
Trigger: AAGATGCCTCTGCAGCCACAATTCTGACCTAAGTGG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAGTCCCGCCACCCCCTTaGCCCCCAACAAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRVPPPP*PPTNPG
Trigger: CCCAGGATTTGTTGGGGGCAAAGGGGGTGGCGGGAC...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGCTGTTGGACAACTGTTaGGGAAACGGCAGGAGACTA +
Preference number: 5 (lower is better)
Translates to: ASATLLRTLQACAPCGNTLLDNC*GNGRRL
Trigger: TAGTCTCCTGCCGTTTCCCAAACAGTTGTCCAACAG...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGATGCCTGCCTGAAGCCTaGGCACCTGGCGTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRCLPEA*APGVRA
Trigger: TGCTCTGACGCCAGGTGCCAAGGCTTCAGGCAGGCA...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTCTGCATGTGAAATCCTaGTCAGTGGCAGCAAACGGC +
Preference number: 5 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPLHVKS*SVAANG
Trigger: GCCGTTTGCTGCCACTGACAAGGATTTCACATGCAG...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCATGGAGACTGCATCGTaGAGAATACTTTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSMETAS*RILSPK
Trigger: CTTTGGAGAAAGTATTCTCAACGATGCAGTCTCCAT...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGTTCCTGCGGTGTGCCTaGGCGTCCTCGATGTCCATG +
Preference number: 5 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGFLRCA*ASSMSM
Trigger: CATGGACATCGAGGACGCCAAGGCACACCGCAGGAA...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGGGCTGCAGAGGCATCTaGATGACTCAAAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLGCRGI*MTQRQV
Trigger: CACCTGCCTTTGAGTCATCAAGATGCCTCTGCAGCC...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAAATCAAGACAGCAGTaGTGGGCCGGCAGAAACCCT +
Preference number: 5 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLKSRQQ*WAGRNP
Trigger: AGGGTTTCTGCCGGCCCACAACTGCTGTCTTGATTT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCCAAGGTGAGCCAAGATaGCCAAGGAACACGGGGTGC +
Preference number: 5 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCQGEPR*PRNTGC
Trigger: GCACCCCGTGTTCCTTGGCAATCTTGGCTCACCTTG...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAGCCCCCGCAGAGCAGCCGGGGAGACCAACTCAAGGGCACCAGAGGCCACAGCCCCCAAATAGAATTATaGGGTGTGCTAAAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: KPPQSSRGDQLKGTRGHSPQIEL*GVLKVD
Trigger: GTCTACCTTTAGCACACCCAATAATTCTATTTGGGG...GCTGTGGCCTCTGGTGCCCTTGAGTTGGTCTCCCCGGCTGCTCTGCGGGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGACCTAACAGGGGCCTCTaGCAGCTCACTTGGGGGAGA +
Preference number: 5 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRPNRGL*QLTWGR
Trigger: TCTCCCCCAAGTGAGCTGCAAGAGGCCCCTGTTAGG...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS GCA 90 bp CTTCTCAGTCTTGCTGAGGTTGACGTCCTTCTTGTTCCTGCGGTGTaGCTTGGCGTCCTCGATGTCCATGAGGCGAATGAGGGGCATGGT +
Preference number: 5 (lower is better)
Translates to: LLSLAEVDVLLVPAV*LGVLDVHEANEGHG
Trigger: ACCATGCCCCTCATTCGCCTCATGGACATCGAGGACGCCAAGGCACACCGCAGGAACAAGAAGGACGTCAACCTCAGCAAGACTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGCCACTTAGGTCAGAATaGTGGCTGCAGAGGCATCTT +
Preference number: 5 (lower is better)
Translates to: KGILWANLGDSGAQAYPLPLRSE*WLQRHL
Trigger: AAGATGCCTCTGCAGCCACAATTCTGACCTAAGTGG...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGCTGCCGATGGCACCTTaGCCAAAGGTTTTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: KGILWANLGDSGAQAYPLLPMAP*PKVLRR
Trigger: CCTTCTTAAAACCTTTGGCAAAGGTGCCATCGGCAG...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCTCGGCTACCCTGCTGAGGACTCTCCAAGCATGTGCGCCCTGCGGGAACACGAGGACGATTCAAGATTaGCAGATCCTTACTTGGAGA +
Preference number: 5 (lower is better)
Translates to: ASATLLRTLQACAPCGNTRTIQD*QILTWR
Trigger: TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCT...CGTGTTCCCGCAGGGCGCACATGCTTGGAGAGTCCTCAGCAGGGTAGCCGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAACATTCAGAACATGCCCAGAGAAGGGCAGCAGCCGTCTGCTACCCAGGGAGAAAGCGCGTGGGAGGATaGCTTCTTAGTCTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: KHSEHAQRRAAAVCYPGRKRVGG*LLSLSR
Trigger: CCGGGAGAGACTAAGAAGCAATCCTCCCACGCGCTT...TCTCCCTGGGTAGCAGACGGCTGCTGCCCTTCTCTGGGCATGTTCTGAATGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417961.5
CDS-3UTR CAA 90 bp GGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGGCCGGCTTCCTGCGGTGTGCCTaGGCGTCCTCGATGTCCATG +
Preference number: 5 (lower is better)
Translates to: GSQHFAVKCKSRQQLWAGFLRCA*ASSMSM
Trigger: CATGGACATCGAGGACGCCAAGGCACACCGCAGGAA...GCCGGCCCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGTCAGTCTTGCTGAGGTaGACGTCCTTCTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLSVLLR*TSFLFL
Trigger: CAGGAACAAGAAGGACGTCAACCTCAGCAAGACTGA...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCTCCGACTCCACAGTGTaGCCCATCTTCTCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCSDSTV*PIFSVL
Trigger: CAAGACTGAGAAGATGGGCAACACTGTGGAGTCGGA...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGAAGGGGTTCAGGTACTaGGCGTCCAGCCACACGAAG +
Preference number: 5 (lower is better)
Translates to: ATASFSSLSSKCEARCDLKGFRY*ASSHTK
Trigger: CTTCGTGTGGCTGGACGCCAAGTACCTGAACCCCTT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGCAAGCCACGGGGTGGTaGTTCCGAGGGGTCATAACA +
Preference number: 5 (lower is better)
Translates to: ATASFSSLSSKCEARCDLQATGW*FRGVIT
Trigger: TGTTATGACCCCTCGGAACAACCACCCCGTGGCTTG...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCTCGAGGCCTTTATCTaGACTGTGAGATGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGLEAFI*TVRWRA
Trigger: CGCCCTCCATCTCACAGTCAAGATAAAGGCCTCGAG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TGGGGAGGGAGATCAGATGGCAGGAGGCGACTAGAGGCTCTCAGCACTTTGCTGCTACAAAAGCGGAGATaGCCGTCCCAAAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: WGGRSDGRRRLEALSTLLLQKRR*PSQKQQ
Trigger: TTGCTGTTTTTGGGACGGCAATCTCCGCTTTTGTAG...CAGCAAAGTGCTGAGAGCCTCTAGTCGCCTCCTGCCATCTGATCTCCCTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp AAAGGAATCCTGTGGGCTAACCTGGGCGACTCTGGCGCTCAGGCCTACCCCTTGAAACCTTCAGCTGTGTaGGTCAGAACAATGGAGACT +
Preference number: 5 (lower is better)
Translates to: KGILWANLGDSGAQAYPLKPSAV*VRTMET
Trigger: AGTCTCCATTGTTCTGACCAACACAGCTGAAGGTTT...CAAGGGGTAGGCCTGAGCGCCAGAGTCGCCCAGGTTAGCCCACAGGATTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp CTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTGGCCTCTCATTCCTGAAACCTTCAGCTGTGTaGGTCAGAACAATGGAGACT +
Preference number: 5 (lower is better)
Translates to: LTSGSRRGGRIGPGLSFLKPSAV*VRTMET
Trigger: AGTCTCCATTGTTCTGACCAACACAGCTGAAGGTTT...CAGGAATGAGAGGCCAGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGCTCGAGGCCTTTATCTaGACTGTGAGATGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: ATASFSSLSSKCEARCDLLEAFI*TVRWRA
Trigger: CGCCCTCCATCTCACAGTCAAGATAAAGGCCTCGAG...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTACGGGGAGGATGGGCTaGCCAGGGGTCGGGAGCACC +
Preference number: 5 (lower is better)
Translates to: FVILRTIQDLQILTWRNRTGRMG*PGVGST
Trigger: GGTGCTCCCGACCCCTGGCAAGCCCATCCTCCCCGT...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGCCCATCTTCTCAGTCTaGCTGAGGTTGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: ATASFSSLSSKCEARCDLPIFSV*LRLTSF
Trigger: GAAGGACGTCAACCTCAGCAAGACTGAGAAGATGGG...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp CAGGGGGTGTGTGTTAGTCTTCCTCCTTCTGTTACATGCCTGGTAACAGTGAAGCAAGCCACGGGGTGGTaGTTCCGAGGGGTCATAACA +
Preference number: 5 (lower is better)
Translates to: QGVCVSLPPSVTCLVTVKQATGW*FRGVIT
Trigger: TGTTATGACCCCTCGGAACAACCACCCCGTGGCTTG...CTTCACTGTTACCAGGCATGTAACAGAAGGAGGAAGACTAACACACACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGCTGTTGGACAACTGTTaGGGAAACGGCAGGAGACTA +
Preference number: 5 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGLLDNC*GNGRRL
Trigger: TAGTCTCCTGCCGTTTCCCAAACAGTTGTCCAACAG...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp CTTGGCTGGCCTGCTCTGACTTCAGGGTCAAGGCGAGGTGGTAGGATCGGGCCTTCAAGCTTCGTCATTTaGAGGACGATTCAAGATTTG +
Preference number: 5 (lower is better)
Translates to: LGWPALTSGSRRGGRIGPSSFVI*RTIQDL
Trigger: CAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA...AGGCCCGATCCTACCACCTCGCCTTGACCCTGAAGTCAGAGCAGGCCAGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAGCTGGACTGCTCCTCTaGCTGGGCCTGCTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: SSFVILRTIQDLQILTWRAGLLL*LGLLPC
Trigger: ACAGGGGAGCAGGCCCAGCAAGAGGAGCAGTCCAGC...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TCCCTCCTGACATCTGGAGCCACACTGCCTGAGGTGGAAGAGATGGAGATGTGCATGGAGACTGCATCGTaGAGAATACTTTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: SLLTSGATLPEVEEMEMCMETAS*RILSPK
Trigger: CTTTGGAGAAAGTATTCTCAACGATGCAGTCTCCAT...GCACATCTCCATCTCTTCCACCTCAGGCAGTGTGGCTCCAGATGTCAGGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGTCCTCGTACCACTTGTaGGTGAGAGTTTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: ATASFSSLSSKCEARCDLSSYHL*VRVFIW
Trigger: CCAGATGAAAACTCTCACCAACAAGTGGTACGAGGA...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCACAGCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGACCTCCTCGTACCACTaGTTGGTGAGAGTTTTCATC +
Preference number: 5 (lower is better)
Translates to: ATASFSSLSSKCEARCDLTSSYH*LVRVFI
Trigger: GATGAAAACTCTCACCAACAAGTGGTACGAGGAGGT...CAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTGTCCCGCCACCCCCTTaGCCCCCAACAAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: FVILRTIQDLQILTWRNRVPPPP*PPTNPG
Trigger: CCCAGGATTTGTTGGGGGCAAAGGGGGTGGCGGGAC...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCATCGTTTTCAAGTCTCAGCTCAAAGTGTGAGGCCAGGTGTGACCTGGCTGGGTTTGCAGATCCTTACTaGGAGAAACCGTCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: ASFSSLSSKCEARCDLAGFADPY*EKPSKP
Trigger: AGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAAA...CCCAGCCAGGTCACACCTGGCCTCACACTTTGAGCTGAGACTTGAAAACGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCCGCCCTCTTATGTCTaGAAGGGGCTGCTGGATGCA +
Preference number: 5 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWPPSYV*KGLLDA
Trigger: TGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCGG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS TCA 90 bp AGAATACTTTCTCCAAAGACCAGCATGTTGAGCACGGGGTCCACATaGAGTGCATTGAAAATGGCAATAGTGGCCACTGGATCGACAGCA +
Preference number: 5 (lower is better)
Translates to: RILSPKTSMLSTGST*SALKMAIVATGSTA
Trigger: TGCTGTCGATCCAGTGGCCACTATTGCCATTTTCAATGCACTTCATGTGGACCCCGTGCTCAACATGCTGGTCTTTGGAGAAAGTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS GCA 90 bp ACTTTCTCCAAAGACCAGCATGTTGAGCACGGGGTCCACATGAAGTaGATTGAAAATGGCAATAGTGGCCACTGGATCGACAGCAGATAT +
Preference number: 5 (lower is better)
Translates to: TFSKDQHVEHGVHMK*IENGNSGHWIDSRY
Trigger: ATATCTGCTGTCGATCCAGTGGCCACTATTGCCATTTTCAATGCACTTCATGTGGACCCCGTGCTCAACATGCTGGTCTTTGGAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAACCGTCAAGGTGAGCCAAGATaGCCAAGGAACACGGGGTGC +
Preference number: 5 (lower is better)
Translates to: FVILRTIQDLQILTWRNRQGEPR*PRNTGC
Trigger: GCACCCCGTGTTCCTTGGCAATCTTGGCTCACCTTG...ACGGTTTCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAGGTTGACGTCCTTCTaGTTCCTGCGGTGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: SSFVILRTIQDLQILTWRRLTSF*FLRCAL
Trigger: CAAGGCACACCGCAGGAACAAGAAGGACGTCAACCT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTAAGGGGTTCAGGTACTaGGCGTCCAGCCACACGAAG +
Preference number: 5 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIKGFRY*ASSHTK
Trigger: CTTCGTGTGGCTGGACGCCAAGTACCTGAACCCCTT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCCGCCCTCTTATGTCTaGAAGGGGCTGCTGGATGCA +
Preference number: 5 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIPPSYV*KGLLDA
Trigger: TGCATCCAGCAGCCCCTTCAAGACATAAGAGGGCGG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTAGGTTGACGTCCTTCTaGTTCCTGCGGTGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIRLTSF*FLRCAL
Trigger: CAAGGCACACCGCAGGAACAAGAAGGACGTCAACCT...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCCCATCTTCTCAGTCTaGCTGAGGTTGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: APNRIIGCAKGRQQQFVIPIFSV*LRLTSF
Trigger: GAAGGACGTCAACCTCAGCAAGACTGAGAAGATGGG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAACCTCCTCGTACCACTaGTTGGTGAGAGTTTTCATC +
Preference number: 5 (lower is better)
Translates to: SSFVILRTIQDLQILTWRTSSYH*LVRVFI
Trigger: GATGAAAACTCTCACCAACAAGTGGTACGAGGAGGT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp ACTAGAGGCTCTCAGCACTTTGCTGTAAAATGCAAATCAAGACAGCAGTTGTGGCCTGGCAAACTGAGTTaGCAAAACAACTTACATCTG +
Preference number: 5 (lower is better)
Translates to: TRGSQHFAVKCKSRQQLWPGKLS*QNNLHL
Trigger: CAGATGTAAGTTGTTTTGCAAACTCAGTTTGCCAGG...CCACAACTGCTGTCTTGATTTGCATTTTACAGCAAAGTGCTGAGAGCCTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp GCCCCAAATAGAATTATTGGGTGTGCTAAAGGTAGACAGCAGCAATTTGTTATTCTGCCGATGGCACCTTaGCCAAAGGTTTTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: APNRIIGCAKGRQQQFVILPMAP*PKVLRR
Trigger: CCTTCTTAAAACCTTTGGCAAAGGTGCCATCGGCAG...AATAACAAATTGCTGCTGTCTACCTTTAGCACACCCAATAATTCTATTTGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGATTTGCAGATCCTTACTaGGAGAAACCGTCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: SSFVILRTIQDLQILTWRFADPY*EKPSKP
Trigger: AGGCTTTGACGGTTTCTCCAAGTAAGGATCTGCAAA...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS-3UTR CAA 90 bp TCAAGCTTCGTCATTTTGAGGACGATTCAAGATTTGCAGATCCTTACTTGGAGAAGGACGATTCAAGATTaGCAGATCCTTACTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SSFVILRTIQDLQILTWRRTIQD*QILTWR
Trigger: TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCT...TCTCCAAGTAAGGATCTGCAAATCTTGAATCGTCCTCAAAATGACGAAGCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS GCA 72 bp CGAGTTCGGAGCCGCGGGGCTAGCAGGACCCGCTTTTaGTTCCGGCTTCCGCTGGAGGCGCGGGCGGGCGAG +
Preference number: 6 (lower is better)
Translates to: RVRSRGASRTRF*FRLPLEARAGE
Trigger: CTCGCCCGCCCGCGCCTCCAGCGGAAGCCGGAAGCAAAAGCGGGTCCTGCTAGCCCCGCGGCTCCGAACTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS TCA 72 bp AGCTCCGACAGGTGCTCCGACTCCACAGTGTTGCCCTaGGCAGGGAGGAAAGGCGGCCCGACGGCCACCAGC +
Preference number: 6 (lower is better)
Translates to: SSDRCSDSTVLP*AGRKGGPTATS
Trigger: GCTGGTGGCCGTCGGGCCGCCTTTCCTCCCTGCTCAGGGCAACACTGTGGAGTCGGAGCACCTGTCGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS CAA 90 bp TCTGTGCGCAGCAAACGCCCATCCTGGGCCTGCCTGCCTGAAGCCTaGGCACCTGGCGTCAGAGCAGCTCCTGCTCGTCGTCCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: SVRSKRPSWACLPEA*APGVRAAPARRPRS
Trigger: GCTCCGAGGACGACGAGCAGGAGCTGCTCTGACGCCAGGTGCCAAGGCTTCAGGCAGGCAGGCCCAGGATGGGCGTTTGCTGCGCACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS TCA 72 bp TGTGCGCAGCAAACGCCCATCCTGGGCCTGCCTGCCTaGAGCCTTGGCACCTGGCGTCAGAGCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: CAQQTPILGLPA*SLGTWRQSSSC
Trigger: GCAGGAGCTGCTCTGACGCCAGGTGCCAAGGCTTCAGGCAGGCAGGCCCAGGATGGGCGTTTGCTGCGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS CCA 72 bp CCATCAATGCAGGGTGACGGGCAGCAGACGGCCTCCTaGGAGCCTGCAGGGAGGCAGGAACGTCCATCAGGG +
Preference number: 6 (lower is better)
Translates to: PSMQGDGQQTAS*EPAGRQERPSG
Trigger: CCCTGATGGACGTTCCTGCCTCCCTGCAGGCTCCCAGGAGGCCGTCTGCTGCCCGTCACCCTGCATTGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS GCA 72 bp ATGGTCATGCCGCTGGACTGCTCCTCTTGCTGGGCCTaGTCCCCTGTCTGCACGGGGAGGATGGGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: MVMPLDCSSCWA*SPVCTGRMGLP
Trigger: TGGCAAGCCCATCCTCCCCGTGCAGACAGGGGAGCAGGCCCAGCAAGAGGAGCAGTCCAGCGGCATGACCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000489787.1
CDS CAA 72 bp AGCAAACGCCCATCCTGGGCCTGCCTGCCTGAAGCCTaGGCACCTGGCGTCAGAGCAGCTCCTGCTCGTCGT +
Preference number: 6 (lower is better)
Translates to: SKRPSWACLPEA*APGVRAAPARR
Trigger: ACGACGAGCAGGAGCTGCTCTGACGCCAGGTGCCAAGGCTTCAGGCAGGCAGGCCCAGGATGGGCGTTTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS TCA 72 bp GCCCGTGGTGCAGGTCCTCCTGCGTCAGCCTCCGAGTaGAGAAGGGGTTCAGGTACTTGGCGTCCAGCCACA +
Preference number: 6 (lower is better)
Translates to: ARGAGPPASASE*RRGSGTWRPAT
Trigger: TGTGGCTGGACGCCAAGTACCTGAACCCCTTCTTCACTCGGAGGCTGACGCAGGAGGACCTGCACCACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS TCA 72 bp ACCCAGGCCGCCAGTGTCCCCAACCCTAACTCCACTTaGCCATCAATGCAGGGTGACGGGCAGCAGACGGCC +
Preference number: 6 (lower is better)
Translates to: TQAASVPNPNST*PSMQGDGQQTA
Trigger: GGCCGTCTGCTGCCCGTCACCCTGCATTGATGGTCAAGTGGAGTTAGGGTTGGGGACACTGGCGGCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS CCA 72 bp AGCTCCTGCTCGTCGTCCTCGGAGCCGGAGGGGCCCTaGCGTACCTCCTCGTACCACTTGTTGGTGAGAGTT +
Preference number: 6 (lower is better)
Translates to: SSCSSSSEPEGP*RTSSYHLLVRV
Trigger: AACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGGCCCCTCCGGCTCCGAGGACGACGAGCAGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS CAA 90 bp TCCTCGGAGCCGGAGGGGCCCTGGCGTACCTCCTCGTACCACTTGTaGGTGAGAGTTTTCATCTGGATGCGCCCGTGGTGCAGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSEPEGPWRTSSYHL*VRVFIWMRPWCRSS
Trigger: GGAGGACCTGCACCACGGGCGCATCCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGGCCCCTCCGGCTCCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS CAA 90 bp TCGTCCTCGGAGCCGGAGGGGCCCTGGCGTACCTCCTCGTACCACTaGTTGGTGAGAGTTTTCATCTGGATGCGCCCGTGGTGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SSSEPEGPWRTSSYH*LVRVFIWMRPWCRS
Trigger: GGACCTGCACCACGGGCGCATCCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGGCCCCTCCGGCTCCGAGGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS GCA 72 bp CCAGTGTCCCCAACCCTAACTCCACTTGACCATCAATaGAGGGTGACGGGCAGCAGACGGCCTCCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: PVSPTLTPLDHQ*RVTGSRRPPGS
Trigger: GCTCCCAGGAGGCCGTCTGCTGCCCGTCACCCTGCATTGATGGTCAAGTGGAGTTAGGGTTGGGGACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS CCA 72 bp CTCCGTCTCAGTGGCCCGAGGGTGGGAGAAAGCGCGTaGGAGGATTGCTTCTTAGTCTCTCCCGGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: LRLSGPRVGESA*EDCFLVSPGAF
Trigger: GAAAGCCCCGGGAGAGACTAAGAAGCAATCCTCCCACGCGCTTTCTCCCACCCTCGGGCCACTGAGACGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417961.5
CDS CAA 72 bp CCGGAGGGGCCCTGGCGTACCTCCTCGTACCACTTGTaGGTGAGAGTTTTCATCTGGATGCGCCCGTGGTGC +
Preference number: 6 (lower is better)
Translates to: PEGPWRTSSYHL*VRVFIWMRPWC
Trigger: GCACCACGGGCGCATCCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGGCCCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS CAA 72 bp GAGCCGGAGGGGCCCTGGCGTACCTCCTCGTACCACTaGTTGGTGAGAGTTTTCATCTGGATGCGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: EPEGPWRTSSYH*LVRVFIWMRPW
Trigger: CCACGGGCGCATCCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGGCCCCTCCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS CAA 90 bp AGGTCCTCCTGCGTCAGCCTCCGAGTGAAGAAGGGGTTCAGGTACTaGGCGTCCAGCCACACGAAGCCCTTAAGGTCCTGCCGCCTGATG +
Preference number: 6 (lower is better)
Translates to: RSSCVSLRVKKGFRY*ASSHTKPLRSCRLM
Trigger: CATCAGGCGGCAGGACCTTAAGGGCTTCGTGTGGCTGGACGCCAAGTACCTGAACCCCTTCTTCACTCGGAGGCTGACGCAGGAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS GCA 72 bp TGGGCCTCGTACTCCTCCTCCGTGAGCTCCGACAGGTaGTCCGACTCCACAGTGTTGCCCATCTTCTCAGTC +
Preference number: 6 (lower is better)
Translates to: WASYSSSVSSDR*SDSTVLPIFSV
Trigger: GACTGAGAAGATGGGCAACACTGTGGAGTCGGAGCACCTGTCGGAGCTCACGGAGGAGGAGTACGAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS TCA 72 bp AGGGGCCCTGGCGTACCTCCTCGTACCACTTGTTGGTaGGAGTTTTCATCTGGATGCGCCCGTGGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: RGPGVPPRTTCW*EFSSGCARGAG
Trigger: ACCTGCACCACGGGCGCATCCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGTACGCCAGGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS CCA 72 bp GCCTGCAGGGAGGCAGGAACGTCCATCAGGGCACAATaGATGCCCAGGACCCCACCTAGGACAGCTAAAACA +
Preference number: 6 (lower is better)
Translates to: ACREAGTSIRAQ*MPRTPPRTAKT
Trigger: TGTTTTAGCTGTCCTAGGTGGGGTCCTGGGCATCCATTGTGCCCTGATGGACGTTCCTGCCTCCCTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS CAA 72 bp CTGAGGTTGACGTCCTTCTTGTTCCTGCGGTGTGCCTaGGCGTCCTCGATGTCCATGAGGCGAATGAGGGGC +
Preference number: 6 (lower is better)
Translates to: LRLTSFLFLRCA*ASSMSMRRMRG
Trigger: GCCCCTCATTCGCCTCATGGACATCGAGGACGCCAAGGCACACCGCAGGAACAAGAAGGACGTCAACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS CAA 72 bp TGCGTCAGCCTCCGAGTGAAGAAGGGGTTCAGGTACTaGGCGTCCAGCCACACGAAGCCCTTAAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: CVSLRVKKGFRY*ASSHTKPLRSC
Trigger: GCAGGACCTTAAGGGCTTCGTGTGGCTGGACGCCAAGTACCTGAACCCCTTCTTCACTCGGAGGCTGACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS CAA 90 bp TCAGTCTTGCTGAGGTTGACGTCCTTCTTGTTCCTGCGGTGTGCCTaGGCGTCCTCGATGTCCATGAGGCGAATGAGGGGCATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: SVLLRLTSFLFLRCA*ASSMSMRRMRGMVL
Trigger: CAGCACCATGCCCCTCATTCGCCTCATGGACATCGAGGACGCCAAGGCACACCGCAGGAACAAGAAGGACGTCAACCTCAGCAAGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS CCA 72 bp ACCTCCTCGTACCACTTGTTGGTGAGAGTTTTCATCTaGATGCGCCCGTGGTGCAGGTCCTCCTGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: TSSYHLLVRVFI*MRPWCRSSCVS
Trigger: GCTGACGCAGGAGGACCTGCACCACGGGCGCATCCAGATGAAAACTCTCACCAACAAGTGGTACGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000490250.1
CDS CAA 90 bp TGCTCCGACTCCACAGTGTTGCCCATCTTCTCAGTCTTGCTGAGGTaGACGTCCTTCTTGTTCCTGCGGTGTGCCTTGGCGTCCTCGATG +
Preference number: 6 (lower is better)
Translates to: CSDSTVLPIFSVLLR*TSFLFLRCALASSM
Trigger: CATCGAGGACGCCAAGGCACACCGCAGGAACAAGAAGGACGTCAACCTCAGCAAGACTGAGAAGATGGGCAACACTGTGGAGTCGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS CAA 90 bp ACAGTGTTGCCCATCTTCTCAGTCTTGCTGAGGTTGACGTCCTTCTaGTTCCTGCGGTGTGCCTTGGCGTCCTCGATGTCCATGAGGCGA +
Preference number: 6 (lower is better)
Translates to: TVLPIFSVLLRLTSF*FLRCALASSMSMRR
Trigger: TCGCCTCATGGACATCGAGGACGCCAAGGCACACCGCAGGAACAAGAAGGACGTCAACCTCAGCAAGACTGAGAAGATGGGCAACACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS TCA 72 bp ACCAGGGTGGTGTGGAGGGTGACATTGAAACCCTCATaGGTTGTATTGGGGAACCTCTCCTCTTCCGCCATC +
Preference number: 6 (lower is better)
Translates to: TRVVWRVTLKPS*VVLGNLSSSAI
Trigger: GATGGCGGAAGAGGAGAGGTTCCCCAATACAACTCATGAGGGTTTCAATGTCACCCTCCACACCACCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361573.3
ENST00000417961.5
ENST00000489787.1
CDS CAA 90 bp AGGACTGGGCCAGGCTGGGGCTTGGTCTTTAAGCTTTTCAAGCTTTaGGGTGATTCTATCATGCAACCAGGACCAGAACTGCTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: RTGPGWGLVFKLFKL*GDSIMQPGPELLFW
Trigger: CCAGAACAGCAGTTCTGGTCCTGGTTGCATGATAGAATCACCCAAAAGCTTGAAAAGCTTAAAGACCAAGCCCCAGCCTGGCCCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS TCA 72 bp TCTCCAAAGACCAGCATGTTGAGCACGGGGTCCACATaGAGTGCATTGAAAATGGCAATAGTGGCCACTGGA +
Preference number: 6 (lower is better)
Translates to: SPKTSMLSTGST*SALKMAIVATG
Trigger: TCCAGTGGCCACTATTGCCATTTTCAATGCACTTCATGTGGACCCCGTGCTCAACATGCTGGTCTTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS TCA 72 bp GATGACAGTGTCCATATTCACCTAGGACAAGGAGGCTaGAGAAAATGGTCATGCCGCTGGACTGCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: DDSVHIHLGQGG*RKWSCRWTAPL
Trigger: AAGAGGAGCAGTCCAGCGGCATGACCATTTTCTTCAGCCTCCTTGTCCTAGGTGAATATGGACACTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489787.1
CDS GCA 72 bp AAAGACCAGCATGTTGAGCACGGGGTCCACATGAAGTaGATTGAAAATGGCAATAGTGGCCACTGGATCGAC +
Preference number: 6 (lower is better)
Translates to: KDQHVEHGVHMK*IENGNSGHWID
Trigger: GTCGATCCAGTGGCCACTATTGCCATTTTCAATGCACTTCATGTGGACCCCGTGCTCAACATGCTGGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS CAA 90 bp GTTAAACCTTCAGCTGTGTTGGTCAGAACAATGGAGACTGCATCGTaGAGAATACTTTCTCCAAAGACCAGCATGTTGAGCACGGGGTCC +
Preference number: 6 (lower is better)
Translates to: VKPSAVLVRTMETAS*RILSPKTSMLSTGS
Trigger: GGACCCCGTGCTCAACATGCTGGTCTTTGGAGAAAGTATTCTCAACGATGCAGTCTCCATTGTTCTGACCAACACAGCTGAAGGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS TCA 72 bp CAATATGCTTCAGCACTAATGCAGAAATTAAGCCAGTaGGAGTGCCGAGCGCTGCAGAGCCAAAGAACATTT +
Preference number: 6 (lower is better)
Translates to: QYASALMQKLSQ*ECRALQSQRTF
Trigger: AAATGTTCTTTGGCTCTGCAGCGCTCGGCACTCTCACTGGCTTAATTTCTGCATTAGTGCTGAAGCATATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5
CDS GCA 72 bp TTTTGGGTGATTCTATCATGCAACCAGGACCAGAACTaGTGTTCTGGGCTTTTCATTAGCAGCAAATCGCAC +
Preference number: 6 (lower is better)
Translates to: FWVILSCNQDQN*CSGLFISSKSH
Trigger: GTGCGATTTGCTGCTAATGAAAAGCCCAGAACAGCAGTTCTGGTCCTGGTTGCATGATAGAATCACCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490250.1
CDS CAA 72 bp TCAGCTGTGTTGGTCAGAACAATGGAGACTGCATCGTaGAGAATACTTTCTCCAAAGACCAGCATGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SAVLVRTMETAS*RILSPKTSMLS
Trigger: GCTCAACATGCTGGTCTTTGGAGAAAGTATTCTCAACGATGCAGTCTCCATTGTTCTGACCAACACAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361573.3
ENST00000417961.5