RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC9A7 (Homo sapiens)

Ensembl gene IDs: ENSG00000065923

Ensembl transcript IDs: ENST00000616978.5

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTTTGAAAGGTGGTCATCAGAAGGAGAAGGTGACTTCTGCTGTGTaGGCTCCTGTCTGCTTTGGACCTTTTCAAAGGGCAGCACAGCAG +
Preference number: 1 (lower is better)
Translates to: LLKGGHQKEKVTSAV*APVCFGPFQRAAQQ
Trigger: CTGCTGTGCTGCCCTTTGAAAAGGTCCAAAGCAGACAGGAGCGCACACAGCAGAAGTCACCTTCTCCTTCTGATGACCACCTTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 90 bp GTTAAGCCTTTTGAAAGGTGGTCATCAGAAGGAGAAGGTGACTTCTaGTGTGTGCGCTCCTGTCTGCTTTGGACCTTTTCAAAGGGCAGC +
Preference number: 1 (lower is better)
Translates to: VKPFERWSSEGEGDF*CVRSCLLWTFSKGS
Trigger: GCTGCCCTTTGAAAAGGTCCAAAGCAGACAGGAGCGCACACAGCAGAAGTCACCTTCTCCTTCTGATGACCACCTTTCAAAAGGCTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp GTGATAGCAAAGGACCACAACCTTCTACTTTGCTCCAGCAGTAAATaGGCCCACCCTTATTCTGAGGAATCCAGTGTGGACTCAGGCATG +
Preference number: 1 (lower is better)
Translates to: VIAKDHNLLLCSSSK*AHPYSEESSVDSGM
Trigger: CATGCCTGAGTCCACACTGGATTCCTCAGAATAAGGGTGGGCCCATTTACTGCTGGAGCAAAGTAGAAGGTTGTGGTCCTTTGCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 90 bp AGGTCTGCTGCGAGCTCTAGACTAAAGGCTCTTGTCAATCCTGGCTaGACATCAAGAACACTCCTGAGGTTCCAAACAAAGCATGGATTC +
Preference number: 1 (lower is better)
Translates to: RSAASSRLKALVNPG*TSRTLLRFQTKHGF
Trigger: GAATCCATGCTTTGTTTGGAACCTCAGGAGTGTTCTTGATGTGCAGCCAGGATTGACAAGAGCCTTTAGTCTAGAGCTCGCAGCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 90 bp ATGCCAGACTGGCAGCAGATAGTTGGCCTTGTGTTGAATGATGCCTaGCATGGCATAGGCAAAATTCTTCTAGATGTGGAACCACTTGAC +
Preference number: 1 (lower is better)
Translates to: MPDWQQIVGLVLNDA*HGIGKILLDVEPLD
Trigger: GTCAAGTGGTTCCACATCTAGAAGAATTTTGCCTATGCCATGTCAGGCATCATTCAACACAAGGCCAACTATCTGCTGCCAGTCTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 90 bp TCTCTCTGTCAGGGCTATACAAAAGTGTGCATCTCCTTAATTACCTaGTACGGAAACCACCACCATCACCATGTGATAGCAAAGGACCAC +
Preference number: 1 (lower is better)
Translates to: SLCQGYTKVCISLIT*YGNHHHHHVIAKDH
Trigger: GTGGTCCTTTGCTATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACTTTTGTATAGCCCTGACAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp CATGGCATAGGCAAAATTCTTCTAGATGTGGAACCACTTGACGAATaGATTCACATTCCCAGGACCCCTGGTAAGGTCAGGGTTATTCTC +
Preference number: 1 (lower is better)
Translates to: HGIGKILLDVEPLDE*IHIPRTPGKVRVIL
Trigger: GAGAATAACCCTGACCTTACCAGGGGTCCTGGGAATGTGAATCCATTCGTCAAGTGGTTCCACATCTAGAAGAATTTTGCCTATGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp TCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATaGGCCACGACTATAGTATACCCTGCTTACAAAAATAAGACTAAC +
Preference number: 1 (lower is better)
Translates to: SKAQVAENRLPVCSI*ATTIVYPAYKNKTN
Trigger: GTTAGTCTTATTTTTGTAAGCAGGGTATACTATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 90 bp TCAGCCAAACCACAGAGGACATTTTCGGGTCTAGAGAACACAGCCTaGAGAGATCCTTGCTGTTTGCTTGATGAAACATTTGATGTCGCA +
Preference number: 1 (lower is better)
Translates to: SAKPQRTFSGLENTA*RDPCCLLDETFDVA
Trigger: TGCGACATCAAATGTTTCATCAAGCAAACAGCAAGGATCTCTTCAGGCTGTGTTCTCTAGACCCGAAAATGTCCTCTGTGGTTTGGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 90 bp GAAAGCTGGAGAGGAATAGCTTACACCCAGAAAAGAACCTCTCAGTaGGGGAAACAGACTAAGAATAGTATCACACTACAGCCTTCTACC +
Preference number: 1 (lower is better)
Translates to: ESWRGIAYTQKRTSQ*GKQTKNSITLQPST
Trigger: GGTAGAAGGCTGTAGTGTGATACTATTCTTAGTCTGTTTCCCTCACTGAGAGGTTCTTTTCTGGGTGTAAGCTATTCCTCTCCAGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp CTTAAGTCCTTCACTAGCCTAGTTGACCCTGAGGGCTCATGGGTTTaGATAGGTTGTTTAGCATTTTTCAAACTTCCAAAGCCCATGGAT +
Preference number: 1 (lower is better)
Translates to: LKSFTSLVDPEGSWV*IGCLAFFKLPKPMD
Trigger: ATCCATGGGCTTTGGAAGTTTGAAAAATGCTAAACAACCTATCCAAACCCATGAGCCCTCAGGGTCAACTAGGCTAGTGAAGGACTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp CTTATTCTTAAGTCCTTCACTAGCCTAGTTGACCCTGAGGGCTCATaGGTTTGGATAGGTTGTTTAGCATTTTTCAAACTTCCAAAGCCC +
Preference number: 1 (lower is better)
Translates to: LILKSFTSLVDPEGS*VWIGCLAFFKLPKP
Trigger: GGGCTTTGGAAGTTTGAAAAATGCTAAACAACCTATCCAAACCCATGAGCCCTCAGGGTCAACTAGGCTAGTGAAGGACTTAAGAATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp CTGAACTGTCGTCCCCACCAACCCAGAACAAATACGTGTATAAGATaGACTTGGGTTTACTCTCTTGGAAGAACTTTGTTTATTTGGATG +
Preference number: 1 (lower is better)
Translates to: LNCRPHQPRTNTCIR*TWVYSLGRTLFIWM
Trigger: CATCCAAATAAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACACGTATTTGTTCTGGGTTGGTGGGGACGACAGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 90 bp AAGGTTTTCGTGATCTTTTCAGCTGTACTTTATGGAGTATGTTCTTaGGTTCTGCAAAGATTAGCATCAAACTCTCTCACAGCTGCCCTG +
Preference number: 1 (lower is better)
Translates to: KVFVIFSAVLYGVCS*VLQRLASNSLTAAL
Trigger: CAGGGCAGCTGTGAGAGAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCTGAAAAGATCACGAAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 90 bp AAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTaGACGATCAATTTCAGTGGTAAATTCCCAATCCATAGACTTAAC +
Preference number: 1 (lower is better)
Translates to: KGQLRRSWPYYEVTL*TINFSGKFPIHRLN
Trigger: GTTAAGTCTATGGATTGGGAATTTACCACTGAAATTGATCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp TGTCGTCCCCACCAACCCAGAACAAATACGTGTATAAGATGGACTTaGGTTTACTCTCTTGGAAGAACTTTGTTTATTTGGATGTACCAT +
Preference number: 1 (lower is better)
Translates to: CRPHQPRTNTCIRWT*VYSLGRTLFIWMYH
Trigger: ATGGTACATCCAAATAAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACACGTATTTGTTCTGGGTTGGTGGGGACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp CCTCGAAGGCTCCAAGGTTTTCGTGATCTTTTCAGCTGTACTTTATaGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCTCT +
Preference number: 1 (lower is better)
Translates to: PRRLQGFRDLFSCTL*SMFLSSAKISIKLS
Trigger: AGAGAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCTGAAAAGATCACGAAAACCTTGGAGCCTTCGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 90 bp AGAACTTTGTTTATTTGGATGTACCATTACTTAGCAGTTTCAATCTaGTCTTATGCCAGACTGGCAGCAGATAGTTGGCCTTGTGTTGAA +
Preference number: 1 (lower is better)
Translates to: RTLFIWMYHYLAVSI*SYARLAADSWPCVE
Trigger: TTCAACACAAGGCCAACTATCTGCTGCCAGTCTGGCATAAGATCAGATTGAAACTGCTAAGTAATGGTACATCCAAATAAACAAAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 90 bp ACCCAGAACAAATACGTGTATAAGATGGACTTGGGTTTACTCTCTTaGAAGAACTTTGTTTATTTGGATGTACCATTACTTAGCAGTTTC +
Preference number: 1 (lower is better)
Translates to: TQNKYVYKMDLGLLS*KNFVYLDVPLLSSF
Trigger: GAAACTGCTAAGTAATGGTACATCCAAATAAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACACGTATTTGTTCTGGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGAGGTGGAGATTGCAGTaGGCCGAGGTCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVRWRLQ*AEVMPL
Trigger: CAGTGGCATGACCTCGGCTCACTGCAATCTCCACCT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAAGTGAGCCGAGGTCATaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTISEPRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGACCTCGGCTCACT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCCCTTCCAGGGGCTATaGAAGCTCTTTCTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVPFQGL*KLFLWL
Trigger: CAGCCAGAGAAAGAGCTTTCATAGCCCCTGGAAGGG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGGTGAGATCAGCAGGCTaGCTTTCTAGCAGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVVRSAG*LSSSPH
Trigger: ATGAGGGCTGCTAGAAAGTCAGCCTGCTGATCTCAC...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGGGGCCCTCTCTTCCCTaGGTAGGACTTCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVGPSLP*VGLLGG
Trigger: CCCACCCAGAAGTCCTACCCAGGGAAGAGAGGGCCC...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGTAGCCCTCAAAAGTTaGATGCTGGCCAGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTIVALKS*MLARCS
Trigger: ACTGCACCTGGCCAGCATTCAACTTTTGAGGGCTAC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGGTAGGAGAATCGCTTaGACCCAGGAGGTGGAGATT +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTIGRRIA*TQEVEI
Trigger: AATCTCCACCTCCTGGGTTCAAGCGATTCTCCTACC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCAGGGAGAGATAGGATaGTGGGATGACGTCAAACAG +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVQGEIG*WDDVKQ
Trigger: CTGTTTGACGTCATCCCATCATCCTATCTCTCCCTG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGCTCATCGCAACCTCTaGCTCTTGGGCTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTIAHRNL*LLGSSN
Trigger: ATTGCTTGAGCCCAAGAGGCAGAGGTTGCGATGAGC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGAGTAACCACCCTGGATaGTCGGATCCATATGCCCTT +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVSNHPG*SDPYAL
Trigger: AAGGGCATATGGATCCGAGCATCCAGGGTGGTTACT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCAGACTGGATTGCAGTaGCATGATCTCAGCTCATCG +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVQTGLQ*HDLSSS
Trigger: CGATGAGCTGAGATCATGCCACTGCAATCCAGTCTG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATAGGCAGAGGTTGCAGTaGGCCAAGACCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDRQRLQ*AKTTPL
Trigger: CAGTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCT...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGGCAAGAGAATCGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDGKRIA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCGATTCTCTTGCC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGAACATCGGACTCGGCTaGACTGTCGTCCCCACCAAC +
Preference number: 2 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVNIGLG*TVVPTN
Trigger: GTTGGTGGGGACGACAGTTCAGCCGAGTCCGATGTT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATTGCCCAGACTGGATTaGAGTGGCATGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTILPRLD*SGMISA
Trigger: AGCTGAGATCATGCCACTGCAATCCAGTCTGGGCAA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATCACCTCTGATGAGATaGTCTAACACCCTGCCACTG +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTISPLMR*SNTLPL
Trigger: CAGTGGCAGGGTGTTAGAGCATCTCATCAGAGGTGA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATACTGCATGGCACTCAGTaGTGTAAAGACACTCGGACT +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTILHGTQ*CKDTRT
Trigger: AGTCCGAGTGTCTTTACACCACTGAGTGCCATGCAG...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAGGAGGCAGAGGCGGGTaGATCACGAGGTCAGCAGAT +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERGGRGG*ITRSAD
Trigger: ATCTGCTGACCTCGTGATCCACCCGCCTCTGCCTCC...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCATATGCCCTTCCTGTaGTTGTGTCCTAGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVHMPFL*LCPRKK
Trigger: TTTCTTCCTAGGACACAATCACAGGAAGGGCATATG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGATAGGATGATGGGATaGCGTCAAACAGACCAACAG +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTIDRMMG*RQTDQQ
Trigger: CTGTTGGTCTGTTTGACGTCATCCCATCATCCTATC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGCCAGGCCTGGTAGCTaGTGTCTGCAACCTCACCCC +
Preference number: 2 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEARPGS*CLQPHP
Trigger: GGGGTGAGGTTGCAGACAGCAGCTACCAGGCCTGGC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGGCTGCAACTAGATTCTaGGCCCTCTCTTCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVAATRF*ALSSLG
Trigger: ACCCAGGGAAGAGAGGGCCCAGAATCTAGTTGCAGC...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGAACCACTTGACGAATaGATTCACATTCCCAGGACC +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTIEPLDE*IHIPRT
Trigger: GGTCCTGGGAATGTGAATCCATTCGTCAAGTGGTTC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGATGCACTGCTGTGTACTaGGATGCAGCCTCTCATGGG +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERCTAVY*DAASHG
Trigger: CCCATGAGAGGCTGCATCTCAGTACACAGCAGTGCA...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATCCATTGTTTGCCCTCTaGTTCCTCAGGTGGCCACTG +
Preference number: 2 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDPLFAL*FLRWPL
Trigger: CAGTGGCCACCTGAGGAATCAGAGGGCAAACAATGG...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGACAACAACAAAGCCTTaGGGTGAACAAAGAACCATC +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVTTTKP*GEQRTI
Trigger: GATGGTTCTTTGTTCACCTCAAGGCTTTGTTGTTGT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGCTGGTAGCTGCTGTCTaGAACCTCACCCCAGGATAT +
Preference number: 2 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVLVAAV*NLTPGY
Trigger: ATATCCTGGGGTGAGGTTGCAGACAGCAGCTACCAG...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGAGACCGAATCGTTCATaGATAGCTGAGATACCCTTT +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVRPNRS*IAEIPF
Trigger: AAAGGGTATCTCAGCTATCCATGAACGATTCGGTCT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGATGTGCCATCATGCCTaGCTCATTTTTGTATTTCTG +
Preference number: 2 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVMCHHA*LIFVFL
Trigger: CAGAAATACAAAAATGAGCCAGGCATGATGGCACAT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATACAACACTCTATGAATTaGACTAAGACTAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTIQHSMN*TKTRKG
Trigger: TCCCTTCCTAGTCTTAGTTCAATTCATAGAGTGTTG...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATTCTTCGTTCCATGTTaGAATGTTCGTGGATGTATT +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTIFFVPC*NVRGCI
Trigger: AATACATCCACGAACATTTCAACATGGAACGAAGAA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAAGCTTTCTAGTGGGCTaGAAATACTTAATGTTCCAT +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTISFLVG*KYLMFH
Trigger: ATGGAACATTAAGTATTTTCAGCCCACTAGAAAGCT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCTGATTCCAAATGGCTaGCAGCTCGGGGTTAGTGAC +
Preference number: 2 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINLIPNG*QLGVSD
Trigger: GTCACTAACCCCGAGCTGTCAGCCATTTGGAATCAG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGATCAAGCAGACTTCGTTaGCAGAGCCTCCAAATTGCT +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERSSRLR*QSLQIA
Trigger: AGCAATTTGGAGGCTCTGGCAACGAAGTCTGCTTGA...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATCAGAATCAAATGTTTaGAGTGAAGACTACAAGACC +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTISESNV*SEDYKT
Trigger: GGTCTTGTAGTCTTCACTGCAAACATTTGATTCTGA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGACCCTGAGGGCTCATaGGTTTGGATAGGTTGTTTA +
Preference number: 2 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDDPEGS*VWIGCL
Trigger: TAAACAACCTATCCAAACCCATGAGCCCTCAGGGTC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGGCTCTTGTCAATCCTaGCTGCACATCAAGAACACT +
Preference number: 2 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDGSCQS*LHIKNT
Trigger: AGTGTTCTTGATGTGCAGCCAGGATTGACAAGAGCC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 90 bp TTTAAAAACAAAAACTGGCCAGATGATCCTAATTCACAGCCAGGGTaGAGAACCTCTGCTCTAGAACATCGGACTCGGCTGAACTGTCGT +
Preference number: 2 (lower is better)
Translates to: FKNKNWPDDPNSQPG*RTSALEHRTRLNCR
Trigger: ACGACAGTTCAGCCGAGTCCGATGTTCTAGAGCAGAGGTTCTCAACCCTGGCTGTGAATTAGGATCATCTGGCCAGTTTTTGTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAAACAAAGCCTTGAGGTaGACAAAGAACCATCACCAG +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERNKALR*TKNHHQ
Trigger: CTGGTGATGGTTCTTTGTTCACCTCAAGGCTTTGTT...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATTGGCCTTGTGTTGAATaGTGCCTGACATGGCATAGG +
Preference number: 2 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINWPCVE*CLTWHR
Trigger: CCTATGCCATGTCAGGCATCATTCAACACAAGGCCA...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCCCAGGAGGTGGAGATTaGAGTGAGCCGAGGTCATGC +
Preference number: 2 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLPGGGD*SEPRSC
Trigger: GCATGACCTCGGCTCACTGCAATCTCCACCTCCTGG...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAAAATTAGGACCAAAGTaGCTTACTTTGATTCACCAA +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTIKLGPK*LTLIHQ
Trigger: TTGGTGAATCAAAGTAAGGCACTTTGGTCCTAATTT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGACTCTTTCTCTGGCTGTaGGGTGTAGGTCTTATTCTT +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERLFLWL*GVGLIL
Trigger: AAGAATAAGACCTACACCCCACAGCCAGAGAAAGAG...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAAATACGTGTATAAGATaGACTTGGGTTTACTCTCTT +
Preference number: 2 (lower is better)
Translates to: AQVAENRLPVCSIWATTINTCIR*TWVYSL
Trigger: AAGAGAGTAAACCCAAGTCCATCTTATACACGTATT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGATCAAATGTTTGCAGTaGAGACTACAAGACCCTTTG +
Preference number: 2 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVIKCLQ*RLQDPL
Trigger: CAAAGGGTCTTGTAGTCTTCACTGCAAACATTTGAT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGATTAGCAGTTTCAATCTaGTCTTATGCCAGACTGGCA +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERLAVSI*SYARLA
Trigger: TGCCAGTCTGGCATAAGATCAGATTGAAACTGCTAA...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAACTAGAGAACACAGCCTaGAGAGATCCTTGCTGTTTG +
Preference number: 2 (lower is better)
Translates to: LTVTLGDSVKPFERWSSELENTA*RDPCCL
Trigger: CAAACAGCAAGGATCTCTTCAGGCTGTGTTCTCTAG...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAATCTCCTTAATTACCTaGTACGGAAACCACCACCAT +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERISLIT*YGNHHH
Trigger: ATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGAT...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAATGCTCGGATCCATATaGCCTTCCTGTGATTGTGTC +
Preference number: 2 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEMLGSI*PSCDCV
Trigger: GACACAATCACAGGAAGGGCATATGGATCCGAGCAT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAAGAACTCACAACGGGTaGACAGTAGGTTTCCAAGTG +
Preference number: 2 (lower is better)
Translates to: LTVTLGDSVKPFERWSSERTHNG*TVGFQV
Trigger: CACTTGGAAACCTACTGTGCACCCGTTGTGAGTTCT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGAGGGCTCATGGGTTTaGATAGGTTGTTTAGCATTT +
Preference number: 2 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDEGSWV*IGCLAF
Trigger: AAATGCTAAACAACCTATCCAAACCCATGAGCCCTC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGGAAGGGAAACTGGGTaGTTATTTTTCTTCCCTAAG +
Preference number: 2 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDGRETG*LFFFPK
Trigger: CTTAGGGAAGAAAAATAACCACCCAGTTTCCCTTCC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGATCTTATGCCAGACTaGCAGCAGATAGTTGGCCTT +
Preference number: 2 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEDLMPD*QQIVGL
Trigger: AAGGCCAACTATCTGCTGCCAGTCTGGCATAAGATC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 90 bp GGGAAGCCCACCCCTCTAGTTTTGGTCTTGGCAATCTACATTTCCTaGTATGTGAGTAGATCAGAATCAAATGTTTGCAGTGAAGACTAC +
Preference number: 2 (lower is better)
Translates to: GKPTPLVLVLAIYIS*YVSRSESNVCSEDY
Trigger: GTAGTCTTCACTGCAAACATTTGATTCTGATCTACTCACATACAAGGAAATGTAGATTGCCAAGACCAAAACTAGAGGGGTGGGCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCTGGATTGCAGTGGCATaGTCTCAGCTCATCGCAACC +
Preference number: 2 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLWIAVA*SQLIAT
Trigger: GGTTGCGATGAGCTGAGATCATGCCACTGCAATCCA...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAAGATGTGGAACCACTTaGCGAATGGATTCACATTCC +
Preference number: 2 (lower is better)
Translates to: LTVTLGDSVKPFERWSSERCGTT*RMDSHS
Trigger: GGAATGTGAATCCATTCGTCAAGTGGTTCCACATCT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 90 bp CTGTCGTCCCCACCAACCCAGAACAAATACGTGTATAAGATGGACTaGGGTTTACTCTCTTGGAAGAACTTTGTTTATTTGGATGTACCA +
Preference number: 2 (lower is better)
Translates to: LSSPPTQNKYVYKMD*GLLSWKNFVYLDVP
Trigger: TGGTACATCCAAATAAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACACGTATTTGTTCTGGGTTGGTGGGGACGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATGCTCCAAGGTTTTCGTaGTCTTTTCAGCTGTACTTT +
Preference number: 2 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINAPRFS*SFQLYF
Trigger: AAAGTACAGCTGAAAAGATCACGAAAACCTTGGAGC...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR GCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCTGCTGTGTACTGAGATaGAGCCTCTCATGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLCCVLR*SLSWEE
Trigger: TTCCTCCCATGAGAGGCTGCATCTCAGTACACAGCA...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATACGGGTGGACTAGACTaGGACACAATATTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINTGGLD*DTIFCL
Trigger: AAGACAAAATATTGTGTCCCAGTCTAGTCCACCCGT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGATGTATAAGATGGACTTaGGTTTACTCTCTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERCIRWT*VYSLGR
Trigger: TCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACA...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 90 bp CAAGGTTTTCGTGATCTTTTCAGCTGTACTTTATGGAGTATGTTCTaGAGTTCTGCAAAGATTAGCATCAAACTCTCTCACAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: QGFRDLFSCTLWSMF*SSAKISIKLSHSCP
Trigger: AGGGCAGCTGTGAGAGAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCTGAAAAGATCACGAAAACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAAGAAGATTAAATGACTaGTTTCACTACGGGTGGACT +
Preference number: 2 (lower is better)
Translates to: LTVTLGDSVKPFERWSSERRLND*FHYGWT
Trigger: AGTCCACCCGTAGTGAAATCAGTCATTTAATCTTCT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGATTCAGCTGTACTTTATaGAGTATGTTCTTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERFSCTL*SMFLSS
Trigger: AGAACTCAAGAACATACTCCATAAAGTACAGCTGAA...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 90 bp ATCAACATCAAAAGGCAGACAAGAAACTTGTCAAGTTCCCCACTTTaGAAGTGGAATAAGAAGTCATATACTTGTGAGATCAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: INIKRQTRNLSSSPL*KWNKKSYTCEISRL
Trigger: CAGCCTGCTGATCTCACAAGTATATGACTTCTTATTCCACTTCAAAAGTGGGGAACTTGACAAGTTTCTTGTCTGCCTTTTGATGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGGAGGGCCCTTGCACTaGTTTAAAAACAAAAACTGG +
Preference number: 2 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLGGPLH*FKNKNW
Trigger: CCAGTTTTTGTTTTTAAATCAGTGCAAGGGCCCTCC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCCTGTTTTTACAAAATaGTCGAATATCAGCAAACTC +
Preference number: 2 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINPVFTK*SNISKL
Trigger: GAGTTTGCTGATATTCGACCATTTTGTAAAAACAGG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCCCCTGTCTGTATTACTaGTCAATACTCAGTTCGTTT +
Preference number: 2 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLPCLYY*SILSSF
Trigger: AAACGAACTGAGTATTGATCAGTAATACAGACAGGG...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 90 bp TATAAGATGGACTTGGGTTTACTCTCTTGGAAGAACTTTGTTTATTaGGATGTACCATTACTTAGCAGTTTCAATCTGATCTTATGCCAG +
Preference number: 2 (lower is better)
Translates to: YKMDLGLLSWKNFVY*DVPLLSSFNLILCQ
Trigger: CTGGCATAAGATCAGATTGAAACTGCTAAGTAATGGTACATCCAAATAAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 90 bp TTTCCCCCTAAGTGCATCAGTGGTGTTTCTACATTTGGAAATTACTaGTTCACATTAAACATCTGGTATGATTACATTAACTTCTACTGC +
Preference number: 2 (lower is better)
Translates to: FPPKCISGVSTFGNY*FTLNIWYDYINFYC
Trigger: GCAGTAGAAGTTAATGTAATCATACCAGATGTTTAATGTGAACAAGTAATTTCCAAATGTAGAAACACCACTGATGCACTTAGGGGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCAACTTCCAAAGCCCATaGATGACCATAAAATCAAAA +
Preference number: 2 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLNFQSP*MTIKSK
Trigger: TTTTGATTTTATGGTCATCCATGGGCTTTGGAAGTT...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 72 bp AAGGAGAAGGTGACTTCTGCTGTGTGCGCTCCTGTCTaGTTTGGACCTTTTCAAAGGGCAGCACAGCAGGCA +
Preference number: 3 (lower is better)
Translates to: KEKVTSAVCAPV*FGPFQRAAQQA
Trigger: TGCCTGCTGTGCTGCCCTTTGAAAAGGTCCAAAGCAGACAGGAGCGCACACAGCAGAAGTCACCTTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGTCAAGCAGACTTCGTaGCCAGAGCCTCCAAATTGC +
Preference number: 3 (lower is better)
Translates to: AQVAENRLPVCSIWATTIVKQTS*PEPPNC
Trigger: GCAATTTGGAGGCTCTGGCAACGAAGTCTGCTTGAC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGAATTCACAGCCAGGGTaGAGAACCTCTGCTCTAGAA +
Preference number: 3 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVNSQPG*RTSALE
Trigger: TTCTAGAGCAGAGGTTCTCAACCCTGGCTGTGAATT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 72 bp GCTTATTTGTCTGATCACCCCAGTAACCACCCTGGATaGTCGGATCCATATGCCCTTCCTGTGATTGTGTCC +
Preference number: 3 (lower is better)
Translates to: AYLSDHPSNHPG*SDPYALPVIVS
Trigger: GGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCAGGGTGGTTACTGGGGTGATCAGACAAATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAGGTAGCCCTCAAAAGTaGAATGCTGGCCAGGTGCAG +
Preference number: 3 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERGSPQK*NAGQVQ
Trigger: CTGCACCTGGCCAGCATTCAACTTTTGAGGGCTACC...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGATGCCTGGCTCATTTTaGTATTTCTGTAGAGACAGG +
Preference number: 3 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVMPGSF*YFCRDR
Trigger: CCTGTCTCTACAGAAATACAAAAATGAGCCAGGCAT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGTTGCCCAGACTGGATaGCAGTGGCATGATCTCAGC +
Preference number: 3 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDVAQTG*QWHDLS
Trigger: GCTGAGATCATGCCACTGCAATCCAGTCTGGGCAAC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCCTCTAGTTTTGGTCTaGGCAATCTACATTTCCTTG +
Preference number: 3 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVPLVLV*AIYISL
Trigger: CAAGGAAATGTAGATTGCCAAGACCAAAACTAGAGG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGGCATCAATGCTTATTaGTCTGATCACCCCAGTAAC +
Preference number: 3 (lower is better)
Translates to: AQVAENRLPVCSIWATTIGINAY*SDHPSN
Trigger: GTTACTGGGGTGATCAGACAAATAAGCATTGATGCC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp CTCTTGTCAATCCTGGCTGCACATCAAGAACACTCCTaGGGTTCCAAACAAAGCATGGATTCCAGGTCCCAC +
Preference number: 3 (lower is better)
Translates to: LLSILAAHQEHS*GSKQSMDSRSH
Trigger: GTGGGACCTGGAATCCATGCTTTGTTTGGAACCTCAGGAGTGTTCTTGATGTGCAGCCAGGATTGACAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 72 bp GCGAGCTCTAGACTAAAGGCTCTTGTCAATCCTGGCTaGACATCAAGAACACTCCTGAGGTTCCAAACAAAG +
Preference number: 3 (lower is better)
Translates to: ASSRLKALVNPG*TSRTLLRFQTK
Trigger: CTTTGTTTGGAACCTCAGGAGTGTTCTTGATGTGCAGCCAGGATTGACAAGAGCCTTTAGTCTAGAGCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 72 bp CACCATGTGATAGCAAAGGACCACAACCTTCTACTTTaGTCCAGCAGTAAATGGGCCCACCCTTATTCTGAG +
Preference number: 3 (lower is better)
Translates to: HHVIAKDHNLLL*SSSKWAHPYSE
Trigger: CTCAGAATAAGGGTGGGCCCATTTACTGCTGGAGCAAAGTAGAAGGTTGTGGTCCTTTGCTATCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 72 bp TTTGAAAGGTGGTCATCAGAAGGAGAAGGTGACTTCTaGTGTGTGCGCTCCTGTCTGCTTTGGACCTTTTCA +
Preference number: 3 (lower is better)
Translates to: FERWSSEGEGDF*CVRSCLLWTFS
Trigger: TGAAAAGGTCCAAAGCAGACAGGAGCGCACACAGCAGAAGTCACCTTCTCCTTCTGATGACCACCTTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 72 bp GGCAAAATTCTTCTAGATGTGGAACCACTTGACGAATaGATTCACATTCCCAGGACCCCTGGTAAGGTCAGG +
Preference number: 3 (lower is better)
Translates to: GKILLDVEPLDE*IHIPRTPGKVR
Trigger: CCTGACCTTACCAGGGGTCCTGGGAATGTGAATCCATTCGTCAAGTGGTTCCACATCTAGAAGAATTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGAGAGATCCTTGCTGTTaGCTTGATGAAACATTTGAT +
Preference number: 3 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVRDPCC*LDETFD
Trigger: ATCAAATGTTTCATCAAGCAAACAGCAAGGATCTCT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGCGCTCCTGTCTGCTTaGGACCTTTTCAAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEALLSA*DLFKGQ
Trigger: CTGCCCTTTGAAAAGGTCCAAAGCAGACAGGAGCGC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCAGGCAAGAGAATCGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLRQENR*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCGATTCTCTTGCCT...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGAGACTACAAGACCCTTaGGGGATAAACACAACACTC +
Preference number: 3 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVRLQDP*GINTTL
Trigger: GAGTGTTGTGTTTATCCCCAAAGGGTCTTGTAGTCT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGACCCACCCCTCTAGTTTaGGTCTTGGCAATCTACATT +
Preference number: 3 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERPTPLV*VLAIYI
Trigger: AATGTAGATTGCCAAGACCAAAACTAGAGGGGTGGG...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATACTTGTTTTGAAAGGATaGTTGATGAGTCTACTTGCT +
Preference number: 3 (lower is better)
Translates to: AQVAENRLPVCSIWATTILVLKG*LMSLLA
Trigger: AGCAAGTAGACTCATCAACAATCCTTTCAAAACAAG...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp GCCAGACTGGCAGCAGATAGTTGGCCTTGTGTTGAATaGTGCCTGACATGGCATAGGCAAAATTCTTCTAGA +
Preference number: 3 (lower is better)
Translates to: ARLAADSWPCVE*CLTWHRQNSSR
Trigger: TCTAGAAGAATTTTGCCTATGCCATGTCAGGCATCATTCAACACAAGGCCAACTATCTGCTGCCAGTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp TCCAGGTCCCACCTGAAGCTACTGAATCTGAATCTCTaGGGGGAGGGCCCTTGCACTGATTTAAAAACAAAA +
Preference number: 3 (lower is better)
Translates to: SRSHLKLLNLNL*GEGPCTDLKTK
Trigger: TTTTGTTTTTAAATCAGTGCAAGGGCCCTCCCCTCAGAGATTCAGATTCAGTAGCTTCAGGTGGGACCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp CTGCAGACAAGGACAGGGAGAGATAGGATGATGGGATaGCGTCAAACAGACCAACAGACCTCTATTTTGGAA +
Preference number: 3 (lower is better)
Translates to: LQTRTGRDRMMG*RQTDQQTSILE
Trigger: TTCCAAAATAGAGGTCTGTTGGTCTGTTTGACGTCATCCCATCATCCTATCTCTCCCTGTCCTTGTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 72 bp CAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATaGGCCACGACTATAGTATACCCTGCTTACAAAAAT +
Preference number: 3 (lower is better)
Translates to: QVAENRLPVCSI*ATTIVYPAYKN
Trigger: ATTTTTGTAAGCAGGGTATACTATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 72 bp CAGGGCTATACAAAAGTGTGCATCTCCTTAATTACCTaGTACGGAAACCACCACCATCACCATGTGATAGCA +
Preference number: 3 (lower is better)
Translates to: QGYTKVCISLIT*YGNHHHHHVIA
Trigger: TGCTATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACTTTTGTATAGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp TGGCAGCAGATAGTTGGCCTTGTGTTGAATGATGCCTaGCATGGCATAGGCAAAATTCTTCTAGATGTGGAA +
Preference number: 3 (lower is better)
Translates to: WQQIVGLVLNDA*HGIGKILLDVE
Trigger: TTCCACATCTAGAAGAATTTTGCCTATGCCATGTCAGGCATCATTCAACACAAGGCCAACTATCTGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGATTCTTCGTTCCATGTaGAAATGTTCGTGGATGTAT +
Preference number: 3 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVILRSM*KCSWMY
Trigger: ATACATCCACGAACATTTCAACATGGAACGAAGAAT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCCAGGGTTTTGCCATGTaGCCCAGTCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLQGFAM*PSLVLN
Trigger: GTTCAAGACCAGACTGGGCAACATGGCAAAACCCTG...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp CACCCTTCTCTTTCCTCGAAGGCTCCAAGGTTTTCGTaGTCTTTTCAGCTGTACTTTATGGAGTATGTTCTT +
Preference number: 3 (lower is better)
Translates to: HPSLSSKAPRFS*SFQLYFMEYVL
Trigger: AAGAACATACTCCATAAAGTACAGCTGAAAAGATCACGAAAACCTTGGAGCCTTCGAGGAAAGAGAAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp CTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTaGACGATCAATTTCAGTGGTAAATTCCCAATCCAT +
Preference number: 3 (lower is better)
Translates to: LRRSWPYYEVTL*TINFSGKFPIH
Trigger: ATGGATTGGGAATTTACCACTGAAATTGATCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 72 bp TTCACTAGCCTAGTTGACCCTGAGGGCTCATGGGTTTaGATAGGTTGTTTAGCATTTTTCAAACTTCCAAAG +
Preference number: 3 (lower is better)
Translates to: FTSLVDPEGSWV*IGCLAFFKLPK
Trigger: CTTTGGAAGTTTGAAAAATGCTAAACAACCTATCCAAACCCATGAGCCCTCAGGGTCAACTAGGCTAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 72 bp AAGTCCTTCACTAGCCTAGTTGACCCTGAGGGCTCATaGGTTTGGATAGGTTGTTTAGCATTTTTCAAACTT +
Preference number: 3 (lower is better)
Translates to: KSFTSLVDPEGS*VWIGCLAFFKL
Trigger: AAGTTTGAAAAATGCTAAACAACCTATCCAAACCCATGAGCCCTCAGGGTCAACTAGGCTAGTGAAGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 72 bp CGTCCCCACCAACCCAGAACAAATACGTGTATAAGATaGACTTGGGTTTACTCTCTTGGAAGAACTTTGTTT +
Preference number: 3 (lower is better)
Translates to: RPHQPRTNTCIR*TWVYSLGRTLF
Trigger: AAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACACGTATTTGTTCTGGGTTGGTGGGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATTTAATGTTCCATTGTTaGCCCTCTGATTCCTCAGGT +
Preference number: 3 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINLMFHC*PSDSSG
Trigger: ACCTGAGGAATCAGAGGGCAAACAATGGAACATTAA...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGTGTATAAGATGGACTaGGGTTTACTCTCTTGGAAG +
Preference number: 3 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEVYKMD*GLLSWK
Trigger: CTTCCAAGAGAGTAAACCCAAGTCCATCTTATACAC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTTATGGAGTATGTTCTaGAGTTCTGCAAAGATTAGC +
Preference number: 3 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDLWSMF*SSAKIS
Trigger: GCTAATCTTTGCAGAACTCAAGAACATACTCCATAA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGATCTCTAGGTCTTGTTTaGAAAGGATTGTTGATGAGT +
Preference number: 3 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERSLGLV*KGLLMS
Trigger: ACTCATCAACAATCCTTTCAAAACAAGACCTAGAGA...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp AACAAACAACAACAACACAACAACAAAGCCTTGAGGTaGACAAAGAACCATCACCAGGGTGTGTCTGTTAGT +
Preference number: 3 (lower is better)
Translates to: NKQQQHNNKALR*TKNHHQGVSVS
Trigger: ACTAACAGACACACCCTGGTGATGGTTCTTTGTTCACCTCAAGGCTTTGTTGTTGTGTTGTTGTTGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR GCA 72 bp AGTTCTGCAAAGATTAGCATCAAACTCTCTCACAGCTaGCCTGTCTGTATTACTGATCAATACTCAGTTCGT +
Preference number: 3 (lower is better)
Translates to: SSAKISIKLSHS*PVCITDQYSVR
Trigger: ACGAACTGAGTATTGATCAGTAATACAGACAGGGCAGCTGTGAGAGAGTTTGATGCTAATCTTTGCAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCTCGTCGGCTCAAAGTTaGGAATTCTACCTAGTCTTG +
Preference number: 3 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLSSAQS*EFYLVL
Trigger: CAAGACTAGGTAGAATTCCAAACTTTGAGCCGACGA...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR-3UTR CAA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGCAATCTACATTTCCTaGTATGTGAGTAGATCAGAA +
Preference number: 3 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEAIYIS*YVSRSE
Trigger: TTCTGATCTACTCACATACAAGGAAATGTAGATTGC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp TTTATTTGGATGTACCATTACTTAGCAGTTTCAATCTaGTCTTATGCCAGACTGGCAGCAGATAGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: FIWMYHYLAVSI*SYARLAADSWP
Trigger: AGGCCAACTATCTGCTGCCAGTCTGGCATAAGATCAGATTGAAACTGCTAAGTAATGGTACATCCAAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR TCA 72 bp CATCAAACTCTCTCACAGCTGCCCTGTCTGTATTACTaGTCAATACTCAGTTCGTTTCACATGACTAACAAT +
Preference number: 3 (lower is better)
Translates to: HQTLSQLPCLYY*SILSSFHMTNN
Trigger: ATTGTTAGTCATGTGAAACGAACTGAGTATTGATCAGTAATACAGACAGGGCAGCTGTGAGAGAGTTTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 72 bp CACCAACCCAGAACAAATACGTGTATAAGATGGACTTaGGTTTACTCTCTTGGAAGAACTTTGTTTATTTGG +
Preference number: 3 (lower is better)
Translates to: HQPRTNTCIRWT*VYSLGRTLFIW
Trigger: CCAAATAAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACACGTATTTGTTCTGGGTTGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CCA 72 bp GAACTGTTAGTTCTTTGTCCTAGACCGAATCGTTCATaGATAGCTGAGATACCCTTTTGCATGTTTTCTAAA +
Preference number: 3 (lower is better)
Translates to: ELLVLCPRPNRS*IAEIPFCMFSK
Trigger: TTTAGAAAACATGCAAAAGGGTATCTCAGCTATCCATGAACGATTCGGTCTAGGACAAAGAACTAACAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGCCGTCGGCGGGTTCTaGCAGCACCGCGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIAVGGF*QHRGPA
Trigger: GGCAGGTCCGCGGTGCTGCCAGAACCCGCCGACGGC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGGCCAGGCCTGGTAGCTaGTGTCTGCAACCTCACCCC +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVARPGS*CLQPHP
Trigger: GGGGTGAGGTTGCAGACAGCAGCTACCAGGCCTGGC...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGGCACTTCCTCCGAGCTaGTCTTCGTTCTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVALPPS*SSFSGC
Trigger: GCAGCCGGAGAACGAAGAGCAGCTCGGAGGAAGTGC...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAAGGTGGAGATTGCAGTaGGCCGAGGTCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIRWRLQ*AEVMPL
Trigger: CAGTGGCATGACCTCGGCTCACTGCAATCTCCACCT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAAACATCGGACTCGGCTaGACTGTCGTCCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTINIGLG*TVVPTN
Trigger: GTTGGTGGGGACGACAGTTCAGCCGAGTCCGATGTT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATACCAGGAGGTGGAGATTaGAGTGAGCCGAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIPGGGD*SEPRSC
Trigger: GCATGACCTCGGCTCACTGCAATCTCCACCTCCTGG...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGACCAGGCGGGGAGCGTaGTGGTTAGTGGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVTRRGA*WLVGDH
Trigger: GTGGTCCCCCACTAACCACCACGCTCCCCGCCTGGT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATACCATTGTTTGCCCTCTaGTTCCTCAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIPLFAL*FLRWPL
Trigger: CAGTGGCCACCTGAGGAATCAGAGGGCAAACAATGG...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCTGATTCCAAATGGCTaGCAGCTCGGGGTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVLIPNG*QLGVSD
Trigger: GTCACTAACCCCGAGCTGTCAGCCATTTGGAATCAG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGTTGCCCAGACTGGATTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVLPRLD*SGMISA
Trigger: AGCTGAGATCATGCCACTGCAATCCAGTCTGGGCAA...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGTCACCTCTGATGAGATaGTCTAACACCCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVSPLMR*SNTLPL
Trigger: CAGTGGCAGGGTGTTAGAGCATCTCATCAGAGGTGA...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATAGGCGGGGAGCGTGGTaGTTAGTGGGGGACCACTGT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDRRGAW*LVGDHC
Trigger: ACAGTGGTCCCCCACTAACCACCACGCTCCCCGCCT...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATGCTGTGTACTGAGATaGAGCCTCTCATGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTICCVLR*SLSWEE
Trigger: TTCCTCCCATGAGAGGCTGCATCTCAGTACACAGCA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAAGTGAGCCGAGGTCATaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERSEPRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGACCTCGGCTCACT...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGATGCTCGGATCCATATaGCCTTCCTGTGATTGTGTC +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVMLGSI*PSCDCV
Trigger: GACACAATCACAGGAAGGGCATATGGATCCGAGCAT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATCTCTCAGTGGCTCTTaGTTATCGTACACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTISLSGS*LSYTWG
Trigger: TCCCCAGGTGTACGATAACCAAGAGCCACTGAGAGA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGGGAGGGCCCTTGCACTaGTTTAAAAACAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVGGPLH*FKNKNW
Trigger: CCAGTTTTTGTTTTTAAATCAGTGCAAGGGCCCTCC...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGAGATGTGCGCGGCTCTaGCCAGGAAGATGGCAACAA +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVRCARL*PGRWQQ
Trigger: TTGTTGCCATCTTCCTGGGCAGAGCCGCGCACATCT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATCAAGCAGACTTCGTTaGCAGAGCCTCCAAATTGCT +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTISSRLR*QSLQIA
Trigger: AGCAATTTGGAGGCTCTGGCAACGAAGTCTGCTTGA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAAGAACTCACAACGGGTaGACAGTAGGTTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIRTHNG*TVGFQV
Trigger: CACTTGGAAACCTACTGTGCACCCGTTGTGAGTTCT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGCGCCAGCACAGTCACTaGGTCAGTGGCAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVRQHSH*VSGRDD
Trigger: ATCATCTCTGCCACTGACCCAGTGACTGTGCTGGCG...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGACCCTGAGGGCTCATaGGTTTGGATAGGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIDPEGS*VWIGCL
Trigger: TAAACAACCTATCCAAACCCATGAGCCCTCAGGGTC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCCTGTGTGTTCCATATaGGCCACGACTATAGTATAC +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVPVCSI*ATTIVY
Trigger: GTATACTATAGTCGTGGCCCATATGGAACACACAGG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATACAGACAATTTTCCACTaGCCAAGAGCTGACTGTGAC +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIQTIFH*PRADCD
Trigger: GTCACAGTCAGCTCTTGGCCAGTGGAAAATTGTCTG...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTGCACTGCTGTGTACTaGGATGCAGCCTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDCTAVY*DAASHG
Trigger: CCCATGAGAGGCTGCATCTCAGTACACAGCAGTGCA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAAACAAAGCCTTGAGGTaGACAAAGAACCATCACCAG +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTINKALR*TKNHHQ
Trigger: CTGGTGATGGTTCTTTGTTCACCTCAAGGCTTTGTT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGGCCCACCCTTATTCTaGGGAATCCAGTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDGPPLF*GIQCGL
Trigger: GAGTCCACACTGGATTCCTCAGAATAAGGGTGGGCC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGGAAAGCTGTCGTTGTTaGGTGGTGGGTCTTGATCGG +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVESCRC*VVGLDR
Trigger: CCGATCAAGACCCACCACCCAACAACGACAGCTTTC...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGGAGGGCTCATGGGTTTaGATAGGTTGTTTAGCATTT +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVEGSWV*IGCLAF
Trigger: AAATGCTAAACAACCTATCCAAACCCATGAGCCCTC...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 72 bp AAAAACTGGCCAGATGATCCTAATTCACAGCCAGGGTaGAGAACCTCTGCTCTAGAACATCGGACTCGGCTG +
Preference number: 4 (lower is better)
Translates to: KNWPDDPNSQPG*RTSALEHRTRL
Trigger: CAGCCGAGTCCGATGTTCTAGAGCAGAGGTTCTCAACCCTGGCTGTGAATTAGGATCATCTGGCCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGTAGCCCTCAAAAGTTaGATGCTGGCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDVALKS*MLARCS
Trigger: ACTGCACCTGGCCAGCATTCAACTTTTGAGGGCTAC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGATGGATTGCAGTGGCATaGTCTCAGCTCATCGCAACC +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERWIAVA*SQLIAT
Trigger: GGTTGCGATGAGCTGAGATCATGCCACTGCAATCCA...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCAACACTCTATGAATTaGACTAAGACTAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVQHSMN*TKTRKG
Trigger: TCCCTTCCTAGTCTTAGTTCAATTCATAGAGTGTTG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGCTCCAAGGTTTTCGTaGTCTTTTCAGCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIAPRFS*SFQLYF
Trigger: AAAGTACAGCTGAAAAGATCACGAAAACCTTGGAGC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAGCTCATCGCAACCTCTaGCTCTTGGGCTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERAHRNL*LLGSSN
Trigger: ATTGCTTGAGCCCAAGAGGCAGAGGTTGCGATGAGC...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAATCTCCTTAATTACCTaGTACGGAAACCACCACCAT +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIISLIT*YGNHHH
Trigger: ATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGAT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAGGAAAGACGGCACTTTaGGGGCCTACTGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERGKTAL*GPTAVF
Trigger: GAAAACTGCAGTAGGCCCCCAAAGTGCCGTCTTTCC...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAAGTAACCACCCTGGATaGTCGGATCCATATGCCCTT +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERSNHPG*SDPYAL
Trigger: AAGGGCATATGGATCCGAGCATCCAGGGTGGTTACT...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGTCGCAGTGTGATTTCTaGCTTCCAGGCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVSQCDF*LPGINA
Trigger: AGCATTGATGCCTGGAAGGCAGAAATCACACTGCGA...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGGAGAAGGTGACTTCTaGTGTGTGCGCTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEGEGDF*CVRSCL
Trigger: CAGACAGGAGCGCACACAGCAGAAGTCACCTTCTCC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAAGTGTTCAGTCCCGCTaGCTGGTAGGCAACAATAGA +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERSVQSR*LVGNNR
Trigger: TCTATTGTTGCCTACCAGCCAGCGGGACTGAACACT...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAACAGTGGTGTTCATTCTaGTCCTCTTCGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEQWCSF*SSSEGS
Trigger: GGAGCCCTCCGAAGAGGACCAGAATGAACACCACTG...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAATGTGCCATCATGCCTaGCTCATTTTTGTATTTCTG +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTIMCHHA*LIFVFL
Trigger: CAGAAATACAAAAATGAGCCAGGCATGATGGCACAT...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGGGCCCTCTCTTCCCTaGGTAGGACTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLGPSLP*VGLLGG
Trigger: CCCACCCAGAAGTCCTACCCAGGGAAGAGAGGGCCC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTGCTCCAGCAGTAAATaGGCCCACCCTTATTCTGAG +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDCSSSK*AHPYSE
Trigger: CTCAGAATAAGGGTGGGCCCATTTACTGCTGGAGCA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGATGTAGCAGCCGACACTaGCAATCCAGAGTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERCSSRH*QSRVSV
Trigger: AACTGACACTCTGGATTGCCAGTGTCGGCTGCTACA...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATAAGGCCCTGTCTTCCTaGGTGCAGCTGAGTGATTTG +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINKALSS*VQLSDL
Trigger: CAAATCACTCAGCTGCACTCAGGAAGACAGGGCCTT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCGCCTTCGGTCAGGATaGAATCAGAGTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINRLRSG*NQSLPL
Trigger: GAGAGGAAGACTCTGATTTCATCCTGACCGAAGGCG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGATAGGATGATGGGATaGCGTCAAACAGACCAACAG +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDDRMMG*RQTDQQ
Trigger: CTGTTGGTCTGTTTGACGTCATCCCATCATCCTATC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGAGCTGGCCCTACTATaGAGTCACACTTTGAACGAT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDELALL*SHTLND
Trigger: ATCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCTGGTAGCTGCTGTCTaGAACCTCACCCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINLVAAV*NLTPGY
Trigger: ATATCCTGGGGTGAGGTTGCAGACAGCAGCTACCAG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGTGACTTCTGCTGTGTaGGCTCCTGTCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEVTSAV*APVCFG
Trigger: TCCAAAGCAGACAGGAGCGCACACAGCAGAAGTCAC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGACTTTGGGGGCCTACTaGAGTTTTCCTTATTGCACA +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVTLGAY*SFPYCT
Trigger: TGTGCAATAAGGAAAACTGCAGTAGGCCCCCAAAGT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGGAGGCAGAGGCGGGTaGATCACGAGGTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLGGRGG*ITRSAD
Trigger: ATCTGCTGACCTCGTGATCCACCCGCCTCTGCCTCC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAGATCTTATGCCAGACTaGCAGCAGATAGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERDLMPD*QQIVGL
Trigger: AAGGCCAACTATCTGCTGCCAGTCTGGCATAAGATC...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATGTATAAGATGGACTTaGGTTTACTCTCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTICIRWT*VYSLGR
Trigger: TCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATCCAAAGCCCACAATTaGAATAATCACAACACAAGT +
Preference number: 4 (lower is better)
Translates to: AQVAENRLPVCSIWATTISKAHN*NNHNTS
Trigger: ACTTGTGTTGTGATTATTCCAATTGTGGGCTTTGGA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGACAACTTAGGAGGAGCTaGCCCTACTATGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERQLRRS*PYYEVT
Trigger: TGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTG...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGAGGCCTAAAGAAAGCTaGAGAGGAATAGCTTACACC +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVRPKES*RGIAYT
Trigger: GGTGTAAGCTATTCCTCTCCAGCTTTCTTTAGGCCT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATAGATGTGGAACCACTTaGCGAATGGATTCACATTCC +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDRCGTT*RMDSHS
Trigger: GGAATGTGAATCCATTCGTCAAGTGGTTCCACATCT...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAATGGCCTTGTGTTGAATaGTGCCTGACATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEWPCVE*CLTWHR
Trigger: CCTATGCCATGTCAGGCATCATTCAACACAAGGCCA...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGCTGTCGTTGTTGGGTaGTGGGTCTTGATCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLAVVVG*WVLIGV
Trigger: GACCCCGATCAAGACCCACCACCCAACAACGACAGC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCTGCATGGCACTCAGTaGTGTAAAGACACTCGGACT +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINLHGTQ*CKDTRT
Trigger: AGTCCGAGTGTCTTTACACCACTGAGTGCCATGCAG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAACAGACTGGATTGCAGTaGCATGATCTCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEQTGLQ*HDLSSS
Trigger: CGATGAGCTGAGATCATGCCACTGCAATCCAGTCTG...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 72 bp AACCCTGATGGGAAGCCCACCCCTCTAGTTTTGGTCTaGGCAATCTACATTTCCTTGTATGTGAGTAGATCA +
Preference number: 4 (lower is better)
Translates to: NPDGKPTPLVLV*AIYISLYVSRS
Trigger: TGATCTACTCACATACAAGGAAATGTAGATTGCCAAGACCAAAACTAGAGGGGTGGGCTTCCCATCAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGGATCACCCCAACGATaGGCCCATAGATCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLGSPQR*AHRSWP
Trigger: TGGCCATGATCTATGGGCTCATCGTTGGGGTGATCC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATCGAAGAACTTTCCGCTaGCATTCACTAATAAGGTAC +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDRRTFR*HSLIRY
Trigger: GTACCTTATTAGTGAATGTCAGCGGAAAGTTCTTCG...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCCCCTTCCAGGGGCTATaGAAGCTCTTTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLPFQGL*KLFLWL
Trigger: CAGCCAGAGAAAGAGCTTTCATAGCCCCTGGAAGGG...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTTAGCAGTTTCAATCTaGTCTTATGCCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDLAVSI*SYARLA
Trigger: TGCCAGTCTGGCATAAGATCAGATTGAAACTGCTAA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCTAGAGAACACAGCCTaGAGAGATCCTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINLENTA*RDPCCL
Trigger: CAAACAGCAAGGATCTCTTCAGGCTGTGTTCTCTAG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGAAGTCATATACTTGTaGGATCAGCAGGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDEVIYL*DQQADF
Trigger: AAAGTCAGCCTGCTGATCTCACAAGTATATGACTTC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCACAACCTTCTACTTTaGTCCAGCAGTAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINHNLLL*SSSKWA
Trigger: GGCCCATTTACTGCTGGAGCAAAGTAGAAGGTTGTG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTACATTAACTTCTACTaGAGACAAGGACAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDYINFY*RQGQGE
Trigger: CTCTCCCTGTCCTTGTCTGCAGTAGAAGTTAATGTA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAACGGGTGGACTAGACTaGGACACAATATTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERTGGLD*DTIFCL
Trigger: AAGACAAAATATTGTGTCCCAGTCTAGTCCACCCGT...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGCTGCAACTAGATTCTaGGCCCTCTCTTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLAATRF*ALSSLG
Trigger: ACCCAGGGAAGAGAGGGCCCAGAATCTAGTTGCAGC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGAACCACTTGACGAATaGATTCACATTCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEEPLDE*IHIPRT
Trigger: GGTCCTGGGAATGTGAATCCATTCGTCAAGTGGTTC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGGCTCTTGTCAATCCTaGCTGCACATCAAGAACACT +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEGSCQS*LHIKNT
Trigger: AGTGTTCTTGATGTGCAGCCAGGATTGACAAGAGCC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGTTCTTCGTTCCATGTTaGAATGTTCGTGGATGTATT +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVFFVPC*NVRGCI
Trigger: AATACATCCACGAACATTTCAACATGGAACGAAGAA...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGGTAGGAGAATCGCTTaGACCCAGGAGGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLGRRIA*TQEVEI
Trigger: AATCTCCACCTCCTGGGTTCAAGCGATTCTCCTACC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATATCAAATGTTTGCAGTaGAGACTACAAGACCCTTTG +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDIKCLQ*RLQDPL
Trigger: CAAAGGGTCTTGTAGTCTTCACTGCAAACATTTGAT...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATCCCTGTCTGTATTACTaGTCAATACTCAGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDPCLYY*SILSSF
Trigger: AAACGAACTGAGTATTGATCAGTAATACAGACAGGG...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATAGAAACCTTCATGCTTaGTTAGTTAGCAGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDRNLHA*LVSSSV
Trigger: AACTGAGCTGCTAACTAATCAAGCATGAAGGTTTCT...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGTGAGATCAGCAGGCTaGCTTTCTAGCAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLVRSAG*LSSSPH
Trigger: ATGAGGGCTGCTAGAAAGTCAGCCTGCTGATCTCAC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCTCTCCAAAAAGAAGTaGGTAAAGATCCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINLSKKK*VKIHVC
Trigger: GCAGACGTGGATCTTTACGCACTTCTTTTTGGAGAG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATCTAAACTACAACTCTTaGCCACTAGATTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDLNYNS*PLDSFD
Trigger: GTCAAAGGAATCTAGTGGCCAAGAGTTGTAGTTTAG...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCATGCCATTGCTCCCCTaGGGCCTGAAAACATCATCA +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLMPLLP*GLKTSS
Trigger: TGATGATGTTTTCAGGCCTCAGGGGAGCAATGGCAT...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAACAACAACAAAGCCTTaGGGTGAACAAAGAACCATC +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSETTTKP*GEQRTI
Trigger: GATGGTTCTTTGTTCACCTCAAGGCTTTGTTGTTGT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATTCGTTCATGGATAGCTaGGATACCCTTTTGCATGTT +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINSFMDS*DTLLHV
Trigger: AACATGCAAAAGGGTATCTCAGCTATCCATGAACGA...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCCAGGGAGAGATAGGATaGTGGGATGACGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLQGEIG*WDDVKQ
Trigger: CTGTTTGACGTCATCCCATCATCCTATCTCTCCCTG...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGAGTAAAATCAGCTTTCTaGTACACTCTTAGAACTCAC +
Preference number: 4 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERVKSAF*YTLRTH
Trigger: GTGAGTTCTAAGAGTGTATCAGAAAGCTGATTTTAC...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTTTGCTAGCACTGGGTaGCAAGATGTGTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDFASTG*QDVFNF
Trigger: AAAATTAAACACATCTTGTCACCCAGTGCTAGCAAA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTATGAAGTCACACTTTaGACGATCAATTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDYEVTL*TINFSG
Trigger: ACCACTGAAATTGATCGTTCAAAGTGTGACTTCATA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATAGACCGAATCGTTCATaGATAGCTGAGATACCCTTT +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINRPNRS*IAEIPF
Trigger: AAAGGGTATCTCAGCTATCCATGAACGATTCGGTCT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGAACAGACCTCTATTTTaGAAGGAACTGTTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVNRPLF*KELLVL
Trigger: AAGAACTAACAGTTCCTTCCAAAATAGAGGTCTGTT...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAAAGCCTTTTGAAAGGTaGTCATCAGAAGGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEKPFER*SSEGEG
Trigger: ACCTTCTCCTTCTGATGACCACCTTTCAAAAGGCTT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCTCACTAATAAGGTACTaGAGGCCCTGTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLSLIRY*RPCLPE
Trigger: CTCAGGAAGACAGGGCCTTCAGTACCTTATTAGTGA...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATAGAAGATTAAATGACTaGTTTCACTACGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINRRLND*FHYGWT
Trigger: AGTCCACCCGTAGTGAAATCAGTCATTTAATCTTCT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGCCACTAGATTCCTTTaGCTTACTGTATCAGAATGT +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEATRFL*LTVSEC
Trigger: ACATTCTGATACAGTAAGTCAAAGGAATCTAGTGGC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAAAAAGAACCTCTCAGTaGGGGAAACAGACTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEKRTSQ*GKQTKN
Trigger: ATTCTTAGTCTGTTTCCCTCACTGAGAGGTTCTTTT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAAGATCCACGTCTGCATaGAATTCATTAAATATCGCC +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSERSTSA*NSLNIA
Trigger: GGCGATATTTAATGAATTGCATGCAGACGTGGATCT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATAATACGTGTATAAGATaGACTTGGGTTTACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDNTCIR*TWVYSL
Trigger: AAGAGAGTAAACCCAAGTCCATCTTATACACGTATT...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTTCAGCTGTACTTTATaGAGTATGTTCTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDFSCTL*SMFLSS
Trigger: AGAACTCAAGAACATACTCCATAAAGTACAGCTGAA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAAGCTTTCTAGTGGGCTaGAAATACTTAATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSESFLVG*KYLMFH
Trigger: ATGGAACATTAAGTATTTTCAGCCCACTAGAAAGCT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCCATATGCCCTTCCTGTaGTTGTGTCCTAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLHMPFL*LCPRKK
Trigger: TTTCTTCCTAGGACACAATCACAGGAAGGGCATATG...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAAAGTCCTTTTCTATCTaGGTTCCTCCAACATATACA +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEKSFSI*VPPTYT
Trigger: TGTATATGTTGGAGGAACTCAGATAGAAAAGGACTT...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR GCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATAAATTAGGACCAAAGTaGCTTACTTTGATTCACCAA +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINKLGPK*LTLIHQ
Trigger: TTGGTGAATCAAAGTAAGGCACTTTGGTCCTAATTT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAACCTGTTTTTACAAAATaGTCGAATATCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEPVFTK*SNISKL
Trigger: GAGTTTGCTGATATTCGACCATTTTGTAAAAACAGG...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATAACTTCCAAAGCCCATaGATGACCATAAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINNFQSP*MTIKSK
Trigger: TTTTGATTTTATGGTCATCCATGGGCTTTGGAAGTT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGGAAGGGAAACTGGGTaGTTATTTTTCTTCCCTAAG +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLGRETG*LFFFPK
Trigger: CTTAGGGAAGAAAAATAACCACCCAGTTTCCCTTCC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 72 bp ACCCCTCTAGTTTTGGTCTTGGCAATCTACATTTCCTaGTATGTGAGTAGATCAGAATCAAATGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TPLVLVLAIYIS*YVSRSESNVCS
Trigger: ACTGCAAACATTTGATTCTGATCTACTCACATACAAGGAAATGTAGATTGCCAAGACCAAAACTAGAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 72 bp CCACCAACCCAGAACAAATACGTGTATAAGATGGACTaGGGTTTACTCTCTTGGAAGAACTTTGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: PPTQNKYVYKMD*GLLSWKNFVYL
Trigger: CAAATAAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTATACACGTATTTGTTCTGGGTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 72 bp CGTGATCTTTTCAGCTGTACTTTATGGAGTATGTTCTaGAGTTCTGCAAAGATTAGCATCAAACTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: RDLFSCTLWSMF*SSAKISIKLSH
Trigger: GTGAGAGAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCTGAAAAGATCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR TCA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCTATGGAGTATGTTCTTaGGTTCTGCAAAGATTAGCA +
Preference number: 4 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLYGVCS*VLQRLA
Trigger: TGCTAATCTTTGCAGAACTCAAGAACATACTCCATA...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
3UTR CAA 72 bp ATAAGATGGACTTGGGTTTACTCTCTTGGAAGAACTTaGTTTATTTGGATGTACCATTACTTAGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: IRWTWVYSLGRT*FIWMYHYLAVS
Trigger: TGAAACTGCTAAGTAATGGTACATCCAAATAAACAAAGTTCTTCCAAGAGAGTAAACCCAAGTCCATCTTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGGTGCAGCTGAGTGATTaGTCACGGCCACTGGTAGCA +
Preference number: 5 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVVQLSD*SRPLVA
Trigger: TGCTACCAGTGGCCGTGACAAATCACTCAGCTGCAC...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGGGGAAAGACGGCACTTaGGGGGCCTACTGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVGKDGT*GAYCSF
Trigger: AAAACTGCAGTAGGCCCCCAAAGTGCCGTCTTTCCC...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGGTCAAGCAGACTTCGTaGCCAGAGCCTCCAAATTGC +
Preference number: 5 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVVKQTS*PEPPNC
Trigger: GCAATTTGGAGGCTCTGGCAACGAAGTCTGCTTGAC...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATAGGGAAGCAGTGCAGTTaGGTAAACTTAGTCACTAGA +
Preference number: 5 (lower is better)
Translates to: AQVAENRLPVCSIWATTIGKQCS*VNLVTR
Trigger: TCTAGTGACTAAGTTTACCAAACTGCACTGCTTCCC...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATAGGCAAGAGAATCGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINRQENR*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCGATTCTCTTGCCT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATGCGCTCCTGTCTGCTTaGGACCTTTTCAAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDALLSA*DLFKGQ
Trigger: CTGCCCTTTGAAAAGGTCCAAAGCAGACAGGAGCGC...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGCTGCAGTTTTCCTTATaGCACATAAAGGTTGTGGAT +
Preference number: 5 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVLQFSL*HIKVVD
Trigger: ATCCACAACCTTTATGTGCAATAAGGAAAACTGCAG...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCTCTCTCAGTGGCTCTaGGTTATCGTACACCTGGGG +
Preference number: 5 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINLSQWL*VIVHLG
Trigger: CCCCAGGTGTACGATAACCAAGAGCCACTGAGAGAG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGATTCTTCGTTCCATGTaGAAATGTTCGTGGATGTAT +
Preference number: 5 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVILRSM*KCSWMY
Trigger: ATACATCCACGAACATTTCAACATGGAACGAAGAAT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATGTTGCCCAGACTGGATaGCAGTGGCATGATCTCAGC +
Preference number: 5 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINVAQTG*QWHDLS
Trigger: GCTGAGATCATGCCACTGCAATCCAGTCTGGGCAAC...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CCCTTCCTTCTCATCTTCTCCAAGGCTCAGGTAGCAGAAAACCGGCTGCCTGTGACCAGTTTGCTACTGTaGAATGGAAATAGAAGACAA +
Preference number: 5 (lower is better)
Translates to: PFLLIFSKAQVAENRLPVTSLLL*NGNRRQ
Trigger: TTGTCTTCTATTTCCATTCAACAGTAGCAAACTGGT...CACAGGCAGCCGGTTTTCTGCTACCTGAGCCTTGGAGAAGATGAGAAGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAACAGGGTTTTGCCATGTaGCCCAGTCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEQGFAM*PSLVLN
Trigger: GTTCAAGACCAGACTGGGCAACATGGCAAAACCCTG...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATAATTCACAGCCAGGGTaGAGAACCTCTGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDNSQPG*RTSALE
Trigger: TTCTAGAGCAGAGGTTCTCAACCCTGGCTGTGAATT...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp GCTCAGGTAGCAGAAAACCGGCTGCCTGTGTGTTCCATATGGGCCACGACTATATTATGGAGTATGTTCTaGAGTTCTGCAAAGATTAGC +
Preference number: 5 (lower is better)
Translates to: AQVAENRLPVCSIWATTILWSMF*SSAKIS
Trigger: GCTAATCTTTGCAGAACTCAAGAACATACTCCATAA...TATAGTCGTGGCCCATATGGAACACACAGGCAGCCGGTTTTCTGCTACCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGGCAGTGGGCTGGACTaGGTTCAGGAGCCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLGSGLD*VQEPAV
Trigger: TACAGCTGGCTCCTGAACCAAGTCCAGCCCACTGCC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATACCTCAAAGAGCTGCTaGGTTCGACTTCTTGATTCC +
Preference number: 5 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINTSKSC*VRLLDS
Trigger: GGAATCAAGAAGTCGAACCAAGCAGCTCTTTGAGGT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGGTAGCCCTCAAAAGTaGAATGCTGGCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLGSPQK*NAGQVQ
Trigger: CTGCACCTGGCCAGCATTCAACTTTTGAGGGCTACC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTTAATGTTCCATTGTTaGCCCTCTGATTCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDLMFHC*PSDSSG
Trigger: ACCTGAGGAATCAGAGGGCAAACAATGGAACATTAA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATATGCCTGGCTCATTTTaGTATTTCTGTAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDMPGSF*YFCRDR
Trigger: CCTGTCTCTACAGAAATACAAAAATGAGCCAGGCAT...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CAAAAGGACAACTTAGGAGGAGCTGGCCCTACTATGAAGTCACACTTTGAACGACCTCTAGTTTTGGTCTaGGCAATCTACATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: QKDNLGGAGPTMKSHFERPLVLV*AIYISL
Trigger: CAAGGAAATGTAGATTGCCAAGACCAAAACTAGAGG...TCGTTCAAAGTGTGACTTCATAGTAGGGCCAGCTCCTCCTAAGTTGTCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATCCCACCCCTCTAGTTTaGGTCTTGGCAATCTACATT +
Preference number: 5 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINPTPLV*VLAIYI
Trigger: AATGTAGATTGCCAAGACCAAAACTAGAGGGGTGGG...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATTGCTCTTTACAATTTTaGCTAGCACTGGGTGACAAG +
Preference number: 5 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDCSLQF*LALGDK
Trigger: CTTGTCACCCAGTGCTAGCAAAAATTGTAAAGAGCA...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGGCAATCTACATTTCCTaGTATGTGAGTAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVAIYIS*YVSRSE
Trigger: TTCTGATCTACTCACATACAAGGAAATGTAGATTGC...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAAGGCATCAATGCTTATTaGTCTGATCACCCCAGTAAC +
Preference number: 5 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEGINAY*SDHPSN
Trigger: GTTACTGGGGTGATCAGACAAATAAGCATTGATGCC...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp TGGATGCTCGGATCCATATGCCCTTCCTGTGATTGTGTCCTAGGAAGAAATGTGTCTCTAGGTCTTGTTTaGAAAGGATTGTTGATGAGT +
Preference number: 5 (lower is better)
Translates to: WMLGSICPSCDCVLGRNVSLGLV*KGLLMS
Trigger: ACTCATCAACAATCCTTTCAAAACAAGACCTAGAGA...CACATTTCTTCCTAGGACACAATCACAGGAAGGGCATATGGATCCGAGCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGTGTGCATCTCCTTAATTACCTGCTACGGAAACCACCACCATCACCATGTGATCTTGTTTTGAAAGGATaGTTGATGAGTCTACTTGCT +
Preference number: 5 (lower is better)
Translates to: SVHLLNYLLRKPPPSPCDLVLKG*LMSLLA
Trigger: AGCAAGTAGACTCATCAACAATCCTTTCAAAACAAG...ATCACATGGTGATGGTGGTGGTTTCCGTAGCAGGTAATTAAGGAGATGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp CTGACTGTGACACTTGGTGATTCTGTTAAGCCTTTTGAAAGGTGGTCATCAGAACAACAGACCTCTATTTaGGAAGGAACTGTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: LTVTLGDSVKPFERWSSEQQTSI*EGTVSS
Trigger: AGAACTAACAGTTCCTTCCAAAATAGAGGTCTGTTG...TTCTGATGACCACCTTTCAAAAGGCTTAACAGAATCACCAAGTGTCACAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp TGCTTGATGAAACATTTGATGTCGCAGTGTGATTTCTGCCTTCCAGGCATCAATAGAGATCCTTGCTGTTaGCTTGATGAAACATTTGAT +
Preference number: 5 (lower is better)
Translates to: CLMKHLMSQCDFCLPGINRDPCC*LDETFD
Trigger: ATCAAATGTTTCATCAAGCAAACAGCAAGGATCTCT...ATTGATGCCTGGAAGGCAGAAATCACACTGCGACATCAAATGTTTCATCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCAGGCAGACAAGAAACTaGTCAAGTTCCCCACTTTTG +
Preference number: 5 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLRQTRN*SSSPLL
Trigger: CAAAAGTGGGGAACTTGACAAGTTTCTTGTCTGCCT...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCGTGTATAAGATGGACTaGGGTTTACTCTCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLVYKMD*GLLSWK
Trigger: CTTCCAAGAGAGTAAACCCAAGTCCATCTTATACAC...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5
CDS-3UTR CAA 90 bp AGCTGTACTTTATGGAGTATGTTCTTGAGTTCTGCAAAGATTAGCATCAAACTCATCCTTGCTGTTTGCTaGATGAAACATTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: SCTLWSMFLSSAKISIKLILAVC*MKHLMS
Trigger: CGACATCAAATGTTTCATCAAGCAAACAGCAAGGAT...GAGTTTGATGCTAATCTTTGCAGAACTCAAGAACATACTCCATAAAGTACAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616978.5