RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC9A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000066230

Ensembl transcript IDs: ENST00000264938.8, ENST00000507407.1, ENST00000514375.1, ENST00000644203.1

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTCGGGCGGCTCTGCGGGCGCAGGCGCGGCACTCTCGGAGTTCTaGGCAGGCGCTGGCGTGGGCGAGGCGGGGCTCGGGGCTCGCGGT +
Preference number: 1 (lower is better)
Translates to: PSGGSAGAGAALSEF*AGAGVGEAGLGARG
Trigger: ACCGCGAGCCCCGAGCCCCGCCTCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCGCAGAGCCGCCCGAGGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR CCA 90 bp CGGGCGCAGGCGCGGCACTCTCGGAGTTCTGCGCAGGCGCTGGCGTaGGCGAGGCGGGGCTCGGGGCTCGCGGTCGCTGTAGCCGCGCGG +
Preference number: 1 (lower is better)
Translates to: RAQARHSRSSAQALA*ARRGSGLAVAVAAR
Trigger: CCGCGCGGCTACAGCGACCGCGAGCCCCGAGCCCCGCCTCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR CCA 90 bp GACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTaGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGACCGGGCGCG +
Preference number: 1 (lower is better)
Translates to: DLRARCDSSGRRPRL*GRAVSGAATLRPGA
Trigger: CGCGCCCGGTCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp ATCTGGGGTTTCTCTGGGACAGCGGCGGCGGCGGTGGGCGGACCGTaGCGCGGGGACGAGCGGCCGGTTAGCGGCGTGTCGGAGCCGGTG +
Preference number: 1 (lower is better)
Translates to: IWGFSGTAAAAVGGP*RGDERPVSGVSEPV
Trigger: CACCGGCTCCGACACGCCGCTAACCGGCCGCTCGTCCCCGCGCCACGGTCCGCCCACCGCCGCCGCCGCTGTCCCAGAGAAACCCCAGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR GCA 90 bp CACCTCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTaGGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTG +
Preference number: 1 (lower is better)
Translates to: HLSPSQGTPGDLRAR*DSSGRRPRLWGRAV
Trigger: CACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGAGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp TTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCAGCGGTaGGAAAGGGCGCGAGCGGCCAGCCATGGCGCGCGGACCCTTCCC +
Preference number: 1 (lower is better)
Translates to: FTQIRLGRASVSRQR*ERARAASHGARTLP
Trigger: GGGAAGGGTCCGCGCGCCATGGCTGGCCGCTCGCGCCCTTTCCCACCGCTGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR GCA 90 bp CCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTaGCTCCCAGAGCTTGGGCTGGATGGTCTCCCTGCAGAGGACCAG +
Preference number: 1 (lower is better)
Translates to: PPRLSTRGLRPLNGL*LPELGLDGLPAEDQ
Trigger: CTGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp CGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATaGACTGTGCCTCCCAGAGCTTGGGCTGGATGGTCTCCCTGCAGA +
Preference number: 1 (lower is better)
Translates to: RAPSPAQHPRPPPTQ*TVPPRAWAGWSPCR
Trigger: TCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp TTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGATGGATaGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCC +
Preference number: 1 (lower is better)
Translates to: FRWVGPCGTCRLRDG*TPSTLPGSAPAASA
Trigger: GGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp ACGTTCCTGCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTaGAAACGGCGCTCGGCCCAGGCCGCTTGCGGGCGCTGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: TFLPLYLQFKDLARA*KRRSAQAACGRWAC
Trigger: GCAGGCCCAGCGCCCGCAAGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGCAGGAACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp CAGCTGCTGGGCCCCACCATCCACTTAAGGACTGGCCGTGATTCTTaGCAAGCTCCGCCCGCCAGGCCACCTCTCACCCAGCCAGGGCAC +
Preference number: 1 (lower is better)
Translates to: QLLGPTIHLRTGRDS*QAPPARPPLTQPGH
Trigger: GTGCCCTGGCTGGGTGAGAGGTGGCCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGTCCTTAAGTGGATGGTGGGGCCCAGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp AGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGATaGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTC +
Preference number: 1 (lower is better)
Translates to: RFQVGWTLWDLPSEG*MDSEHPPRLSTRGL
Trigger: GAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR TCA 90 bp GACAGAGCAGCTGCTGGGCCCCACCATCCACTTAAGGACTGGCCGTaGTTCTTGGCAAGCTCCGCCCGCCAGGCCACCTCTCACCCAGCC +
Preference number: 1 (lower is better)
Translates to: DRAAAGPHHPLKDWP*FLASSARQATSHPA
Trigger: GGCTGGGTGAGAGGTGGCCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGTCCTTAAGTGGATGGTGGGGCCCAGCAGCTGCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR TCA 90 bp TGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTaGGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCG +
Preference number: 1 (lower is better)
Translates to: CRQVSGGLDPVGLAV*GMDGLRAPSPAQHP
Trigger: CGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp CCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATaGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCC +
Preference number: 1 (lower is better)
Translates to: PPPTQWTVPPRAWAG*SPCRGPGALSKASP
Trigger: GGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp GCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTaGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTC +
Preference number: 1 (lower is better)
Translates to: AASAHSMDCASQSLG*MVSLQRTRSSVQGL
Trigger: GAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp CACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTaGGCTGGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAG +
Preference number: 1 (lower is better)
Translates to: HPRPPPTQWTVPPRA*AGWSPCRGPGALSK
Trigger: CTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR GCA 90 bp TCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTaGCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCA +
Preference number: 1 (lower is better)
Translates to: STVQAGFRWVGPCGT*RLRDGWTPSTLPGS
Trigger: TGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR GCA 90 bp ACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGTCTCCCTaGAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGCT +
Preference number: 1 (lower is better)
Translates to: TQWTVPPRAWAGWSP*RGPGALSKASPWDA
Trigger: AGCGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp CACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTaGGACTTGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCC +
Preference number: 1 (lower is better)
Translates to: HHFHRAGRFQVGWTL*DLPSEGWMDSEHPP
Trigger: GGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp GCTCCGATGAACGTCAGGACGGTGGCTGCAGCAGGGAACCAGGGCTaGCCTTGGATCTGTCCAGTAGGGTCACTGACTGGGCAGGGCTTG +
Preference number: 1 (lower is better)
Translates to: APMNVRTVAAAGNQG*PWICPVGSLTGQGL
Trigger: CAAGCCCTGCCCAGTCAGTGACCCTACTGGACAGATCCAAGGCCAGCCCTGGTTCCCTGCTGCAGCCACCGTCCTGACGTTCATCGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp GTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTaGACCCTGTGGGACTTGCCGTCTGAGGGATGGATGGACTCCGAG +
Preference number: 1 (lower is better)
Translates to: VHLHHFHRAGRFQVG*TLWDLPSEGWMDSE
Trigger: CTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTaGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGATGGATGGACT +
Preference number: 1 (lower is better)
Translates to: GVSTSTTSTVQAGFR*VGPCGTCRLRDGWT
Trigger: AGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 90 bp ATGAACGTCAGGACGGTGGCTGCAGCAGGGAACCAGGGCTGGCCTTaGATCTGTCCAGTAGGGTCACTGACTGGGCAGGGCTTGCTGCAT +
Preference number: 1 (lower is better)
Translates to: MNVRTVAAAGNQGWP*ICPVGSLTGQGLLH
Trigger: ATGCAGCAAGCCCTGCCCAGTCAGTGACCCTACTGGACAGATCCAAGGCCAGCCCTGGTTCCCTGCTGCAGCCACCGTCCTGACGTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR TCA 90 bp GGCTTGCTGCATAGAGGATGGCTGCATTTTGTGCTCAGAGTTGGTTaGAATGGCTACGAAGTGTGGAGAATAACCACTGAATCCCAAAAA +
Preference number: 1 (lower is better)
Translates to: GLLHRGWLHFVLRVG*NGYEVWRITTESQK
Trigger: TTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTAGCCATTTCAACCAACTCTGAGCACAAAATGCAGCCATCCTCTATGCAGCAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CCA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCAGTTCTGCGCAGGCGCTaGCGTGGGCGAGGCGGGGCT +
Preference number: 2 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPVLRRR*RGRGGA
Trigger: AGCCCCGCCTCGCCCACGCCAGCGCCTGCGCAGAAC...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR-3UTR CCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGGACCTGGCGAGGGCCTaGAAACGGCGCTCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SHPARAPRATSAPGATAQDLARA*KRRSAQ
Trigger: CTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTC...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGCGGAGACCTCGTCTGTaGGGACGGGCCGTGTCCGGG +
Preference number: 2 (lower is better)
Translates to: SHPARAPRATSAPGATAQRRPRL*GRAVSG
Trigger: CCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCG...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR TCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACCGCTCGGGAGGTCCCTaGGTCGGTCCCCGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHRSGGP*VGPRVS
Trigger: ACTGACTCGGGGACCGACTCAGGGACCTCCCGAGCG...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR GCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGGCACTCTCGGAGTTCTaGGCAGGCGCTGGCGTGGGC +
Preference number: 2 (lower is better)
Translates to: SHPARAPRATSAPGATAQALSEF*AGAGVG
Trigger: GCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGC...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR-3UTR TCA 90 bp ACTTGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCCGCTCGGGAGGTCCCTaGGTCGGTCCCCGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: TCRLRDGWTPSTLPGSAPRSGGP*VGPRVS
Trigger: ACTGACTCGGGGACCGACTCAGGGACCTCCCGAGCG...GGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR GCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGGGGACAGAGCAGCTaGTGGGCCCCACCATCCACT +
Preference number: 2 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWAGGQSS*WAPPST
Trigger: AGTGGATGGTGGGGCCCAGCAGCTGCTCTGTCCCCC...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CCA 90 bp CCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGGATCTGGGGTTTCTCTaGGACAGCGGCGGCGGCGGT +
Preference number: 2 (lower is better)
Translates to: PRPPPTQWTVPPRAWAGWDLGFL*DSGGGG
Trigger: ACCGCCGCCGCCGCTGTCCCAGAGAAACCCCAGATC...CCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR CAA 90 bp GCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTaGGGCTGGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: APAASAHSMDCASQS*GWMVSLQRTRSSVQ
Trigger: TTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CCA 90 bp CCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGGGGGGCCCGGAACCTTaGGCTGGTTTCACGCAAATC +
Preference number: 2 (lower is better)
Translates to: PRPPPTQWTVPPRAWAGWGGPEP*AGFTQI
Trigger: GATTTGCGTGAAACCAGCCCAAGGTTCCGGGCCCCC...CCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CAA 90 bp TTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTaGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTC +
Preference number: 2 (lower is better)
Translates to: FHRAGRFQVGWTLWD*PSEGWMDSEHPPRL
Trigger: GAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CCA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCAGCCGCGCGGGGATCTaGGGTTTCTCTGGGACAGCG +
Preference number: 2 (lower is better)
Translates to: ATLPAVQRPGEGLETALGSRAGI*GFSGTA
Trigger: CGCTGTCCCAGAGAAACCCCAGATCCCCGCGCGGCT...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR-3UTR CCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTTCACGCAAATCCGTTTaGGGCGAGCCTCGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWASRKSV*GEPRFP
Trigger: GGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGA...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGTCCAAGGCCTCGCCCTaGGACGCTGGAAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWSKASP*DAGRGG
Trigger: CCCACCCCTTCCAGCGTCCCAGGGCGAGGCCTTGGA...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR GCA 90 bp CTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGGACGGAAGACGTTCCTaGCACTTTACCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: LPGSAPAASAHSMDCASQDGRRS*HFTCSS
Trigger: TGAACTGCAGGTAAAGTGGCAGGAACGTCTTCCGTC...CTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CAA 90 bp GATGAACGTCAGGACGGTGGCTGCAGCAGGGAACCAGGGCTGGCCTaGGATCTGTCCAGTAGGGTCACTGACTGGGCAGGGCTTGCTGCA +
Preference number: 2 (lower is better)
Translates to: DERQDGGCSREPGLA*DLSSRVTDWAGLAA
Trigger: TGCAGCAAGCCCTGCCCAGTCAGTGACCCTACTGGACAGATCCAAGGCCAGCCCTGGTTCCCTGCTGCAGCCACCGTCCTGACGTTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR GCA 90 bp TCCGAAGCAGCGGTCATGCAGGCTTTTGTGTGGCTGACGCTTCCCTTTTTCACAAGCGGCGTCTCCTCCTaGTCCAGCGCGTGCGGCGGT +
Preference number: 2 (lower is better)
Translates to: SEAAVMQAFVWLTLPFFTSGVSS*SSACGG
Trigger: ACCGCCGCACGCGCTGGAGCAGGAGGAGACGCCGCT...TGTGAAAAAGGGAAGCGTCAGCCACACAAAAGCCTGCATGACCGCTGCTTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR-3UTR GCA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGTCCTGCCACTTTACCTaGAGTTCAAAGACCTGGCGA +
Preference number: 2 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTSCHFT*SSKTWR
Trigger: TCGCCAGGTCTTTGAACTGCAGGTAAAGTGGCAGGA...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR GCA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCCACTCAATGGACTGTaGCTCCCAGAGCTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRPLNGL*LPELGL
Trigger: CAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGG...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGCCCGGAACCTTGGGCTaGTTTCACGCAAATCCGTTT +
Preference number: 2 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWPGTLG*FHANPF
Trigger: AAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGGG...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CCA 90 bp TTCACAACAGTAAAAAGCTATCAATGGGAAATTGTGGACTTTTCCCACCAGGGAGGGGGCCCGGAACCTTaGGCTGGTTTCACGCAAATC +
Preference number: 2 (lower is better)
Translates to: FTTVKSYQWEIVDFSHQGGGPEP*AGFTQI
Trigger: GATTTGCGTGAAACCAGCCCAAGGTTCCGGGCCCCC...TCCCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGCTTTTTACTGTTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR GCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGTCCTGCCACTTTACCTaGAGTTCAAAGACCTGGCGA +
Preference number: 2 (lower is better)
Translates to: YEVWRITTESQKVTALDLSCHFT*SSKTWR
Trigger: TCGCCAGGTCTTTGAACTGCAGGTAAAGTGGCAGGA...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR GCA 72 bp GGCTCTGCGGGCGCAGGCGCGGCACTCTCGGAGTTCTaGGCAGGCGCTGGCGTGGGCGAGGCGGGGCTCGGG +
Preference number: 3 (lower is better)
Translates to: GSAGAGAALSEF*AGAGVGEAGLG
Trigger: CCCGAGCCCCGCCTCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCGCAGAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR CCA 72 bp TTCTCTGGGACAGCGGCGGCGGCGGTGGGCGGACCGTaGCGCGGGGACGAGCGGCCGGTTAGCGGCGTGTCG +
Preference number: 3 (lower is better)
Translates to: FSGTAAAAVGGP*RGDERPVSGVS
Trigger: CGACACGCCGCTAACCGGCCGCTCGTCCCCGCGCCACGGTCCGCCCACCGCCGCCGCCGCTGTCCCAGAGAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
3UTR CCA 72 bp GCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTaGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGA +
Preference number: 3 (lower is better)
Translates to: ARCDSSGRRPRL*GRAVSGAATLR
Trigger: TCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR GCA 72 bp GCCCCGGCCTGCTCCGATGAACGTCAGGACGGTGGCTaGAGCAGGGAACCAGGGCTGGCCTTGGATCTGTCC +
Preference number: 3 (lower is better)
Translates to: APACSDERQDGG*SREPGLALDLS
Trigger: GGACAGATCCAAGGCCAGCCCTGGTTCCCTGCTGCAGCCACCGTCCTGACGTTCATCGGAGCAGGCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp CCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTaGAAACGGCGCTCGGCCCAGGCCGCTTGCGGGCGC +
Preference number: 3 (lower is better)
Translates to: PLYLQFKDLARA*KRRSAQAACGR
Trigger: GCGCCCGCAAGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp TCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATaGACTGTGCCTCCCAGAGCTTGGGCTGGATGGTCT +
Preference number: 3 (lower is better)
Translates to: SPAQHPRPPPTQ*TVPPRAWAGWS
Trigger: AGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp GTTGGACCCTGTGGGACTTGCCGTCTGAGGGATGGATaGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCG +
Preference number: 3 (lower is better)
Translates to: VGPCGTCRLRDG*TPSTLPGSAPA
Trigger: CGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR GCA 72 bp CTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTaGCTCCCAGAGCTTGGGCTGGATGGTCTCCCTGCA +
Preference number: 3 (lower is better)
Translates to: LSTRGLRPLNGL*LPELGLDGLPA
Trigger: TGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR TCA 72 bp GCTGCTGGGCCCCACCATCCACTTAAGGACTGGCCGTaGTTCTTGGCAAGCTCCGCCCGCCAGGCCACCTCT +
Preference number: 3 (lower is better)
Translates to: AAGPHHPLKDWP*FLASSARQATS
Trigger: AGAGGTGGCCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGTCCTTAAGTGGATGGTGGGGCCCAGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR GCA 72 bp ACTGTGCCTCCCAGAGCTTGGGCTGGATGGTCTCCCTaGAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCC +
Preference number: 3 (lower is better)
Translates to: TVPPRAWAGWSP*RGPGALSKASP
Trigger: GGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp GGCCCCACCATCCACTTAAGGACTGGCCGTGATTCTTaGCAAGCTCCGCCCGCCAGGCCACCTCTCACCCAG +
Preference number: 3 (lower is better)
Translates to: GPTIHLRTGRDS*QAPPARPPLTQ
Trigger: CTGGGTGAGAGGTGGCCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGTCCTTAAGTGGATGGTGGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR TCA 72 bp GTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTaGGGGATGGATGGACTCCGAGCACCCTCCCCGGCT +
Preference number: 3 (lower is better)
Translates to: VSGGLDPVGLAV*GMDGLRAPSPA
Trigger: AGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp GCCCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTaGGGCGAGCCTCGGTTTCCCGGCAGCGGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: ARNLGLVSRKSV*GEPRFPGSGGK
Trigger: TTTCCCACCGCTGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp AGACGTTCCTGCCACTTTACCTGCAGTTCAAAGACCTaGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCG +
Preference number: 3 (lower is better)
Translates to: RRSCHFTCSSKT*RGPGNGARPRP
Trigger: CGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGCAGGAACGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp CCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTaGGCTGGATGGTCTCCCTGCAGAGGACCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: PPPTQWTVPPRA*AGWSPCRGPGA
Trigger: AGCTCCTGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CAA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGTCCATGCCCCCTGGTTaGTTAAGGGGGACAGAGCAG +
Preference number: 3 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTSMPPG*LRGTEQ
Trigger: CTGCTCTGTCCCCCTTAACAAACCAGGGGGCATGGA...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CAA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGTGCCTCCCAGAGCTaGGGCTGGATGGTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGCASQS*GWMVSL
Trigger: CAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACA...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR GCA 72 bp CAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTaGCGTCTGAGGGATGGATGGACTCCGAGCACCCTC +
Preference number: 3 (lower is better)
Translates to: QAGFRWVGPCGT*RLRDGWTPSTL
Trigger: GAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp AACGTCAGGACGGTGGCTGCAGCAGGGAACCAGGGCTaGCCTTGGATCTGTCCAGTAGGGTCACTGACTGGG +
Preference number: 3 (lower is better)
Translates to: NVRTVAAAGNQG*PWICPVGSLTG
Trigger: CCCAGTCAGTGACCCTACTGGACAGATCCAAGGCCAGCCCTGGTTCCCTGCTGCAGCCACCGTCCTGACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp CACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTaGACCCTGTGGGACTTGCCGTCTGAGGGATGGATG +
Preference number: 3 (lower is better)
Translates to: HHFHRAGRFQVG*TLWDLPSEGWM
Trigger: CATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CCA 72 bp ACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTaGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAT +
Preference number: 3 (lower is better)
Translates to: TSTTSTVQAGFR*VGPCGTCRLRD
Trigger: ATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR-3UTR CAA 90 bp TCCGAAGCAGCGGTCATGCAGGCTTTTGTGTGGCTGACGCTTCCCTTTTTCACATTCACGCAAATCCGTTaGGGGCGAGCCTCGGTTTCC +
Preference number: 3 (lower is better)
Translates to: SEAAVMQAFVWLTLPFFTFTQIR*GRASVS
Trigger: GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAA...TGTGAAAAAGGGAAGCGTCAGCCACACAAAAGCCTGCATGACCGCTGCTTCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TGCGGGCGCAGGCGCGGCACTCTCGGAGTTCTGCGCAGGCGCTGGCGTGGGCGAGGCCAGGCCCCGGCCTaGTCCGATGAACGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: CGRRRGTLGVLRRRWRGRGQAPA*SDERQD
Trigger: GTCCTGACGTTCATCGGAGCAGGCCGGGGCCTGGCC...TCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp TCTGTGGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGACCGGGCGCGGGCAGCACAGAACACCTGCCTaGCCACCCCCGGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVGTGRVRGRHPETGRGQHRTPA*PPPVLK
Trigger: CTTCAGCACCGGGGGTGGGCAGGCAGGTGTTCTGTG...CTGCCCGCGCCCGGTCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCACGGAGACCTCGTCTGTaGGGACGGGCCGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPRRPRL*GRAVSG
Trigger: CCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCG...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACCCCCACATTGCCGCCTaGTCAGCGCAGGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHPHIAA*SAQGWD
Trigger: GTCCCAGCCCTGCGCTGAGCAGGCGGCAATGTGGGG...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp TGCGGGCGCAGGCGCGGCACTCTCGGAGTTCTGCGCAGGCGCTGGCGTGGGCGAGGGGGACAGAGCAGCTaGTGGGCCCCACCATCCACT +
Preference number: 4 (lower is better)
Translates to: CGRRRGTLGVLRRRWRGRGGQSS*WAPPST
Trigger: AGTGGATGGTGGGGCCCAGCAGCTGCTCTGTCCCCC...TCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp TGCGGGCGCAGGCGCGGCACTCTCGGAGTTCTGCGCAGGCGCTGGCGTGGGCGACGTCAGGACGGTGGCTaGAGCAGGGAACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CGRRRGTLGVLRRRWRGRRQDGG*SREPGL
Trigger: CAGCCCTGGTTCCCTGCTGCAGCCACCGTCCTGACG...TCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR CCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACGGGACAGCCCGGTGGTaGCCGCGTTCCACACGGTAC +
Preference number: 4 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHGTARW*PRSTRY
Trigger: GTACCGTGTGGAACGCGGCCACCACCGGGCTGTCCC...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCAGGCCCAGCACGATaGGCAGGGCGCTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: TSAPGATAQAGDLVCGDGPGPAR*AGRSRE
Trigger: TTCCCGAGAGCGCCCTGCTCATCGTGCTGGGCCTGG...CCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCAGTAGCGTGTGGTGCGTaGCCATGTCCTCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPVACGA*PCPPRP
Trigger: GGGACGCGGAGGACATGGTCACGCACCACACGCTAC...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGCGTCCTCCGTGGGCGTaGGCTCGTGTCGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: SHPARAPRATSAPGATAQRPPWA*ARVGCT
Trigger: TGTACAGCCGACACGAGCTCACGCCCACGGAGGACG...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TCTGTGGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGACCGGGCGCGGGCAGTGTCGGCTGTACAGATaGTTGTACTCCTGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SVGTGRVRGRHPETGRGQCRLYR*LYSCRG
Trigger: GCCGCGGCAGGAGTACAAGCATCTGTACAGCCGACA...CTGCCCGCGCCCGGTCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACCGTCAGGACGGTGGCTaGAGCAGGGAACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHRQDGG*SREPGL
Trigger: CAGCCCTGGTTCCCTGCTGCAGCCACCGTCCTGACG...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGAGCCGCGCGGGGATCTaGGGTTTCTCTGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: SHPARAPRATSAPGATAQSRAGI*GFSGTA
Trigger: CGCTGTCCCAGAGAAACCCCAGATCCCCGCGCGGCT...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGTCCAAGGCCTCGCCCTaGGACGCTGGAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TSAPGATAQAGDLVCGDGSKASP*DAGRGG
Trigger: CCCACCCCTTCCAGCGTCCCAGGGCGAGGCCTTGGA...CCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGCCATGCATTGCGCGGTaGACCGCACGACGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SHPARAPRATSAPGATAQPCIAR*TARRSC
Trigger: GCAGGAGCGTCGTGCGGTCCACCGCGCAATGCATGG...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGGCCCACTCGAAGGTaGCCACCTGGAAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWAGPTRR*PPGSPR
Trigger: GCGGGGGCTTCCAGGTGGTCACCTTCGAGTGGGCCC...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACGGTCCACAGCCGCCATaGGGCTGCCAAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHGPQPP*GCQTGG
Trigger: TCCTCCTGTTTGGCAGCCTCATGGCGGCTGTGGACC...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACTGCTGGGGGAGCGGATaGAGGCCAGGGACCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDCWGSG*RPGTRG
Trigger: GCCGCGGGTCCCTGGCCTTCATCCGCTCCCCCAGCA...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATTGCTGGGGGAGCGGATaGAGGCCAGGGACCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDCWGSG*RPGTRG
Trigger: GCCGCGGGTCCCTGGCCTTCATCCGCTCCCCCAGCA...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TCTGTGGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGACCGGGCGCGGGCAGCCAGGCAGACAGCGCTaGCATTTTCTCTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SVGTGRVRGRHPETGRGQPGRQR*HFLSGG
Trigger: ACCTCCTGAGAGAAAATGTCAGCGCTGTCTGCCTGG...CTGCCCGCGCCCGGTCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TGCGGGCGCAGGCGCGGCACTCTCGGAGTTCTGCGCAGGCGCTGGCGTGGGCGAGCTCCAGCTGCACCATaGGGTAGCGGTTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CGRRRGTLGVLRRRWRGRAPAAP*GSGSEA
Trigger: GGCTTCTGAACCGCTACCGCATGGTGCAGCTGGAGC...TCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp ACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTCGGGGCCGTCTGCCTaGAGGAAGGAGTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: TPSTLPGSAPAASAHSMDSGPSA*RKESTD
Trigger: GTCCGTGGACTCCTTCCTGCAGGCAGACGGCCCCGA...GTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp GCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGCTGGAAGGGGTGAGCGGCGTCTCCTCCTaGTCCAGCGCGTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: AEDQELCPRPRPGTLEGVSGVSS*SSACGG
Trigger: ACCGCCGCACGCGCTGGAGCAGGAGGAGACGCCGCT...CACCCCTTCCAGCGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTAGCGGCGTCTCCTCCTaGTCCAGCGCGTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: LQFKDLARAWKRRSAQAASGVSS*SSACGG
Trigger: ACCGCCGCACGCGCTGGAGCAGGAGGAGACGCCGCT...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACCAGAACAGCCACTTGTaGCGGGAAGGCCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TPSTLPGSAPAASAHSMDQNSHL*REGQAP
Trigger: CGGGGCCTGGCCTTCCCGGCACAAGTGGCTGTTCTG...GTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTTGCTCAGCGCAGGGCTaGGACGCGCATGTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWACSAQG*DAHVAG
Trigger: CCCCGCGACATGCGCGTCCCAGCCCTGCGCTGAGCA...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR CCA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCAGCGCAGGGCTCTCCATaGGCAGCTTCCCATTGGGGA +
Preference number: 4 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPAQGSP*AASHWG
Trigger: TCCCCAATGGGAAGCTGCCCATGGAGAGCCCTGCGC...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACGATCTGGGGTTTCTCTaGGACAGCGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TPSTLPGSAPAASAHSMDDLGFL*DSGGGG
Trigger: ACCGCCGCCGCCGCTGTCCCAGAGAAACCCCAGATC...GTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGTTCTGCGCAGGCGCTaGCGTGGGCGAGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDVLRRR*RGRGGA
Trigger: AGCCCCGCCTCGCCCACGCCAGCGCCTGCGCAGAAC...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGGACCTGGCGAGGGCCTaGAAACGGCGCTCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRPPPTQWTVPPRAWAGWDLARA*KRRSAQ
Trigger: CTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTC...CCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTGGACGCTGGAAGGGGTaGGAAGGGTCAGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PAQHPRPPPTQWTVPPRAGRWKG*EGSGVR
Trigger: CCGGACCCCTGACCCTTCCCACCCCTTCCAGCGTCC...AGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACGGTCCACAGCCGCCATaGGGCTGCCAAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TPSTLPGSAPAASAHSMDGPQPP*GCQTGG
Trigger: TCCTCCTGTTTGGCAGCCTCATGGCGGCTGTGGACC...GTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTCCCGGCCTGCTCCGATaGACGTCAGGACGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQFKDLARAWKRRSAQAAPGLLR*TSGRWL
Trigger: CAGCCACCGTCCTGACGTTCATCGGAGCAGGCCGGG...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGCGTTCAGGATTTCGGTaGTGGGCCCTCCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SHPARAPRATSAPGATAQRSGFR*WALPVW
Trigger: CCAGACAGGGAGGGCCCATCACCGAAATCCTGAACG...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGGCTCCAGCTGCACCATaGGGTAGCGGTTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SHPARAPRATSAPGATAQAPAAP*GSGSEA
Trigger: GGCTTCTGAACCGCTACCGCATGGTGCAGCTGGAGC...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCAATGCTCCGCCGTCGCTaGTCCAGAGACTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPMLRRR*SRDCMS
Trigger: GGACATGCAGTCTCTGGAGCAGCGACGGCGGAGCAT...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGTCAACACAGAACACCTaGCTGCCCACCCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SHPARAPRATSAPGATAQSTQNT*LPTPGA
Trigger: AGCACCGGGGGTGGGCAGGCAGGTGTTCTGTGTTGA...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCAGGTGGAACCCGATCTTaGCCAAGCTGGCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPGGTRS*PSWPRG
Trigger: TCCTCGTGGCCAGCTTGGCCAAGATCGGGTTCCACC...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGGGGGGCCCGGAACCTTaGGCTGGTTTCACGCAAATC +
Preference number: 4 (lower is better)
Translates to: SHPARAPRATSAPGATAQGGPEP*AGFTQI
Trigger: GATTTGCGTGAAACCAGCCCAAGGTTCCGGGCCCCC...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGACCTGGCGAGGGCCTaGAAACGGCGCTCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDDLARA*KRRSAQ
Trigger: CTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTC...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACGGATCCAGAGCGCGATaGCGTAGGGATCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: TPSTLPGSAPAASAHSMDGSRAR*RRDPAR
Trigger: ACGTGCAGGATCCCTACGTCATCGCGCTCTGGATCC...GTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGCGGTGGGCGTCAGTGTaGAGGACGCGATGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: PRPPPTQWTVPPRAWAGWRWASV*RTRCGR
Trigger: CCGACCACATCGCGTCCTTCACACTGACGCCCACCG...CCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TCTCACCCAGCCAGGGCACCCCGGGCGACCTCCGCGCCAGGTGCGACAGCTCAGTGTACAGAACCACGGTaGCTGCGTCGTTCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SHPARAPRATSAPGATAQCTEPR*LRRSAA
Trigger: CGCTGCTGAACGACGCAGTCACCGTGGTTCTGTACA...CTGAGCTGTCGCACCTGGCGCGGAGGTCGCCCGGGGTGCCCTGGCTGGGTGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTCCACGGACTTGCTGCTaGGGCGGAAGGGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: LQFKDLARAWKRRSAQAAPRTCC*GGRASG
Trigger: GCCTGATGCCCTTCCGCCTCAGCAGCAAGTCCGTGG...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR TCA 90 bp ACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACCGTTCAGGATTTCGGTaGTGGGCCCTCCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TPSTLPGSAPAASAHSMDRSGFR*WALPVW
Trigger: CCAGACAGGGAGGGCCCATCACCGAAATCCTGAACG...GTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGATGCTCCGCCGTCGCTaGTCCAGAGACTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: LPGSAPAASAHSMDCASQMLRRR*SRDCMS
Trigger: GGACATGCAGTCTCTGGAGCAGCGACGGCGGAGCAT...CTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATAGAGGGACAGCCCGGTaGTGGCCGCGTTCCACACGG +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDRGTAR*WPRSTR
Trigger: CCGTGTGGAACGCGGCCACCACCGGGCTGTCCCTCT...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTAGCCGCGCGGGGATCTaGGGTTTCTCTGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWASRAGI*GFSGTA
Trigger: CGCTGTCCCAGAGAAACCCCAGATCCCCGCGCGGCT...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTACTGGCCGTGATTCTTaGCAAGCTCCGCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PAQHPRPPPTQWTVPPRATGRDS*QAPPAR
Trigger: CCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGT...AGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGGACGCTGGAAGGGGTaGGAAGGGTCAGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDGRWKG*EGSGVR
Trigger: CCGGACCCCTGACCCTTCCCACCCCTTCCAGCGTCC...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACTCCAAGGCCTCGCCCTaGGACGCTGGAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDSKASP*DAGRGG
Trigger: CCCACCCCTTCCAGCGTCCCAGGGCGAGGCCTTGGA...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGCCTCCGCCCACTCAATaGACTGTGCCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPGSAPAASAHSMDCASQPPPTQ*TVPPRA
Trigger: AGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGG...CTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACAGGTTTCAGGTGGGTTaGACCCTGTGGGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHRFQVG*TLWDLP
Trigger: CGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCT...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACTTGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCCGGTGGGCGTCAGTGTaGAGGACGCGATGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: TCRLRDGWTPSTLPGSAPRWASV*RTRCGR
Trigger: CCGACCACATCGCGTCCTTCACACTGACGCCCACCG...GGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTAGAGGCGGTTGGGCATaGAGTAGCCGGCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWARGGWA*SSRRPA
Trigger: TGCTGGACGCCGGCTACTTCATGCCCAACCGCCTCT...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTCGTGCAGCTTCTCGTTaGGCCGAGGTTCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWARAASR*AEVPGA
Trigger: AGCACCGGGAACCTCGGCTCAACGAGAAGCTGCACG...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTCCCGGCGCGCTCCGGTaGCGGTACCGGCTACAGTCC +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGPGALR*RYRLQS
Trigger: GGACTGTAGCCGGTACCGGCACCGGAGCGCGCCGGG...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp CCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTCGAAAGCGCGCCCGTaGAGCTTCTCGTTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: PAQHPRPPPTQWTVPPRASKARP*SFSLSR
Trigger: TCGGCTCAACGAGAAGCTGCACGGGCGCGCTTTCGA...AGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGACCTCCGCGTCCCGGATaGTCCGCCGTCGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGPPRPG*SAVAAP
Trigger: TGGAGCAGCGACGGCGGAGCATCCGGGACGCGGAGG...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCGCCTGGCCAGGAGGCTaGGGTCCAGGGCCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: PEPWAGFTQIRLGRASVSAWPGG*GPGPRP
Trigger: CGGACGAGGCCCTGGACCGCAGCCTCCTGGCCAGGC...GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR CCA 90 bp CCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTCGATCTTGGCCAAGCTaGCCACGAGGATCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PAQHPRPPPTQWTVPPRARSWPS*PRGSRA
Trigger: CGCTCTGGATCCTCGTGGCCAGCTTGGCCAAGATCG...AGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTATGGCCGAGAGGATGTaGTCGAAAGCGCGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWAMAERM*SKARPC
Trigger: GCACGGGCGCGCTTTCGACCACATCCTCTCGGCCAT...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACCTGTTTCTCCGCTTCTaGGCACGCTCCCGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TPSTLPGSAPAASAHSMDLFLRF*ARSRLY
Trigger: GTACAAGCGGGAGCGTGCCCAGAAGCGGAGAAACAG...GTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGAGCCAGGGCGGCAGCCTaGCCAGGAGGCTGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGARAAA*PGGCGP
Trigger: TGGACCGCAGCCTCCTGGCCAGGCTGCCGCCCTGGC...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR CCA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGGATCTGGGGTTTCTCTaGGACAGCGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTDLGFL*DSGGGG
Trigger: ACCGCCGCCGCCGCTGTCCCAGAGAAACCCCAGATC...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGACGGAGACCTCGTCTGTaGGGACGGGCCGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGRRPRL*GRAVSG
Trigger: CCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCG...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGCTGGAAGGGGTGCGTCTGAGGGATGGATaGACTCCGAGCACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AEDQELCPRPRPGTLEGVRLRDG*TPSTLP
Trigger: GGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACG...CACCCCTTCCAGCGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TCTGTGGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGACCGGGCGCGGGCAGCCACCAGGGACTCAATaGGGACTCAATGTGCAATAT +
Preference number: 4 (lower is better)
Translates to: SVGTGRVRGRHPETGRGQPPGTQ*GLNVQY
Trigger: ATATTGCACATTGAGTCCCCATTGAGTCCCTGGTGG...CTGCCCGCGCCCGGTCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTGGGCCCACTCGAAGGTaGCCACCTGGAAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGGPTRR*PPGSPR
Trigger: GCGGGGGCTTCCAGGTGGTCACCTTCGAGTGGGCCC...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATCCAGAGCGCGATaGCGTAGGGATCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWAGSRAR*RRDPAR
Trigger: ACGTGCAGGATCCCTACGTCATCGCGCTCTGGATCC...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGACCCGGCCTGCTCCGATaGACGTCAGGACGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGPGLLR*TSGRWL
Trigger: CAGCCACCGTCCTGACGTTCATCGGAGCAGGCCGGG...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTCAGCCTGGGCTGCCGTaGGTGAGGTGTTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: LQFKDLARAWKRRSAQAAQPGLP*VRCSHS
Trigger: AGAGTGAGAACACCTCACTCACGGCAGCCCAGGCTG...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCGAAGAAGGACACTATaGCCTTCACGCAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: TSAPGATAQAGDLVCGDGRRRTL*PSRSPR
Trigger: GCGTGGACTGCGTGAAGGGCATAGTGTCCTTCTTCG...CCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGTCGAAAGCGCGCCCGTaGAGCTTCTCGTTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: PRPPPTQWTVPPRAWAGWSKARP*SFSLSR
Trigger: TCGGCTCAACGAGAAGCTGCACGGGCGCGCTTTCGA...CCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCCTCCGCGTCCCGGATaGTCCGCCGTCGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PEPWAGFTQIRLGRASVSPPRPG*SAVAAP
Trigger: TGGAGCAGCGACGGCGGAGCATCCGGGACGCGGAGG...GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCAGCTTCCCATTGGGGATaGTGCTGTTTCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPASHWG*CCFSAS
Trigger: AGAAGCGGAGAAACAGCAGCATCCCCAATGGGAAGC...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTTGCGTGCGGGCCCTCTaGGAGGGGACCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRCVRAL*EGTTVS
Trigger: GGAGACGGTGGTCCCCTCGCAGAGGGCCCGCACGCA...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAGCACTCTCGGAGTTCTaGGCAGGCGCTGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGALSEF*AGAGVG
Trigger: GCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGC...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTCCACCACTTCCACCGTaGAGGCAGGTTTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LQFKDLARAWKRRSAQAAPPLPP*RQVSGG
Trigger: CCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGG...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCTGGGCAGGGCTTGCTaGATAGAGGATGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: TSAPGATAQAGDLVCGDGLGRAC*IEDGCI
Trigger: AATGCAGCCATCCTCTATGCAGCAAGCCCTGCCCAG...CCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGTGAAGGACGCGATGTaGTCGGCCGCCCAGACGATG +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDVKDAM*SAAQTM
Trigger: CATCGTCTGGGCGGCCGACCACATCGCGTCCTTCAC...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TTAAGGACTGGCCGTGATTCTTGGCAAGCTCCGCCCGCCAGGCCACCTCTCACCGGGACAGCCCGGTGGTaGCCGCGTTCCACACGGTAC +
Preference number: 4 (lower is better)
Translates to: LRTGRDSWQAPPARPPLTGTARW*PRSTRY
Trigger: GTACCGTGTGGAACGCGGCCACCACCGGGCTGTCCC...GGTGAGAGGTGGCCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGTCCTTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACACTGGCCGTGATTCTTaGCAAGCTCCGCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDTGRDS*QAPPAR
Trigger: CCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGT...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTCCAGGCAGACAGCGCTaGCATTTTCTCTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PAQHPRPPPTQWTVPPRAPGRQR*HFLSGG
Trigger: ACCTCCTGAGAGAAAATGTCAGCGCTGTCTGCCTGG...AGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCGTCCTCCGTGGGCGTaGGCTCGTGTCGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: ATLPAVQRPGEGLETALGRPPWA*ARVGCT
Trigger: TGTACAGCCGACACGAGCTCACGCCCACGGAGGACG...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAGCCCACCCCCGGTGCTaGAGACCGACCAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGAHPRC*RPTSQG
Trigger: TCCTTGACTGGTCGGTCTTCAGCACCGGGGGTGGGC...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTCTGGGCTGCCGTGAGTaGGGTGTTCTCACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LQFKDLARAWKRRSAQAALGCRE*GVLTLV
Trigger: AACCAGAGTGAGAACACCTCACTCACGGCAGCCCAG...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACTTGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGGATGGTCCCCAGGTTaGCGAAGAAGAGGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: TCRLRDGWTPSTLPGSAPGWSPG*RRRGGW
Trigger: CCAACCGCCTCTTCTTCGGCAACCTGGGGACCATCC...GGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGTCGATGATACGCACATaGTTGGTGAAGCGCGTCACC +
Preference number: 4 (lower is better)
Translates to: TSAPGATAQAGDLVCGDGSMIRT*LVKRVT
Trigger: GGTGACGCGCTTCACCAAGCATGTGCGTATCATCGA...CCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGTTCAGAAGCCAGGTCTaGAGGACCACACCGATGGCC +
Preference number: 4 (lower is better)
Translates to: PRPPPTQWTVPPRAWAGWFRSQV*RTTPMA
Trigger: GGCCATCGGTGTGGTCCTGCAGACCTGGCTTCTGAA...CCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATAGCCGAGGTTCCCGGTaGTCGCTCCTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDSRGSR*SLLFTF
Trigger: GAAGGTGAAGAGGAGCGAGCACCGGGAACCTCGGCT...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTGCACTCTCGGAGTTCTaGGCAGGCGCTGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRALSEF*AGAGVG
Trigger: GCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGC...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACTTGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCTGGATGGTCTCCCTaGAGAGGACCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TCRLRDGWTPSTLPGSAPAGWSP*RGPGAL
Trigger: CAGAGCTCCTGGTCCTCTGCAGGGAGACCATCCAGC...GGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGGGACCCTGTGGGACTTaGCGTCTGAGGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTGPCGT*RLRDGW
Trigger: CCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCC...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCAGGCCAGGCCCCGGCCTaGTCCGATGAACGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPAGQAPA*SDERQD
Trigger: GTCCTGACGTTCATCGGAGCAGGCCGGGGCCTGGCC...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCAGAACAGCCACTTGTaGCGGGAAGGCCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ATLPAVQRPGEGLETALGQNSHL*REGQAP
Trigger: CGGGGCCTGGCCTTCCCGGCACAAGTGGCTGTTCTG...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACTCAACACAGAACACCTaGCTGCCCACCCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDSTQNT*LPTPGA
Trigger: AGCACCGGGGGTGGGCAGGCAGGTGTTCTGTGTTGA...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TTAAGGACTGGCCGTGATTCTTGGCAAGCTCCGCCCGCCAGGCCACCTCTCACCGGAGCCGGTGTCACCTaGAGGGGAGTCGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: LRTGRDSWQAPPARPPLTGAGVT*RGVGRC
Trigger: ACAGCGTCCGACTCCCCTGCAGGTGACACCGGCTCC...GGTGAGAGGTGGCCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGTCCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGTGGAACCCGATCTTaGCCAAGCTGGCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDGGTRS*PSWPRG
Trigger: TCCTCGTGGCCAGCTTGGCCAAGATCGGGTTCCACC...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGAGAGGGACAGCCCGGTaGTGGCCGCGTTCCACACGG +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWRGTAR*WPRSTR
Trigger: CCGTGTGGAACGCGGCCACCACCGGGCTGTCCCTCT...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCCGGAACCTTGGGCTaGTTTCACGCAAATCCGTTT +
Preference number: 4 (lower is better)
Translates to: TSAPGATAQAGDLVCGDGPGTLG*FHANPF
Trigger: AAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGGG...CCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTAGAGCTTGGGCTGGATaGTCTCCCTGCAGAGGACCA +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWARAWAG*SPCRGP
Trigger: TGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCT...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGCCTCCGCCCACTCAATaGACTGTGCCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTPPPTQ*TVPPRA
Trigger: AGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGG...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TCTGTGGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGACCGGGCGCGGGCAGAATGGCTACGAAGTGTaGAGAATAACCACTGAATCC +
Preference number: 4 (lower is better)
Translates to: SVGTGRVRGRHPETGRGQNGYEV*RITTES
Trigger: GGATTCAGTGGTTATTCTCCACACTTCGTAGCCATT...CTGCCCGCGCCCGGTCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTGCAGGGAACCAGGGCTaGCCTTGGATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LQFKDLARAWKRRSAQAAAGNQG*PWICPV
Trigger: TACTGGACAGATCCAAGGCCAGCCCTGGTTCCCTGC...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATTGTTCCAGGTCCAGATaGACGGGTTCACGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDCSRSR*TGSRPR
Trigger: TCTCGGCCGTGAACCCGTTCATCTGGACCTGGAACA...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACTGTTCCAGGTCCAGATaGACGGGTTCACGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDCSRSR*TGSRPR
Trigger: TCTCGGCCGTGAACCCGTTCATCTGGACCTGGAACA...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTGTAGCGTGTGGTGCGTaGCCATGTCCTCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRVACGA*PCPPRP
Trigger: GGGACGCGGAGGACATGGTCACGCACCACACGCTAC...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACAGGCTTTTGTGTGGCTaGCGCTTCCCTTTTTCACAA +
Preference number: 4 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHRLLCG*RFPFSQ
Trigger: TTGTGAAAAAGGGAAGCGTCAGCCACACAAAAGCCT...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATCTGGGCTGCCGTGAGTaGGGTGTTCTCACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDLGCRE*GVLTLV
Trigger: AACCAGAGTGAGAACACCTCACTCACGGCAGCCCAG...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAAGTAGGGAATCTGCGTaGGGGCCCTCTGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGSRESA*GPSARG
Trigger: TCCCCTCGCAGAGGGCCCGCACGCAGATTCCCTACT...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCGGAATCGCCATGCATTaGGCGGTGGACCGCACGACG +
Preference number: 4 (lower is better)
Translates to: ATLPAVQRPGEGLETALGGIAMH*AVDRTT
Trigger: CGTCGTGCGGTCCACCGCGCAATGCATGGCGATTCC...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGATCGAAGGTGACCACCTaGAAGCCCCCGCTCTCGCCG +
Preference number: 4 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGSKVTT*KPPLSP
Trigger: CGGCGAGAGCGGGGGCTTCCAGGTGGTCACCTTCGA...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACTGCAGTTCAAAGACCTaGCGAGGGCCTGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDCSSKT*RGPGNG
Trigger: GCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCA...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATAGAGCTTGGGCTGGATaGTCTCCCTGCAGAGGACCA +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDRAWAG*SPCRGP
Trigger: TGGTCCTCTGCAGGGAGACCATCCAGCCCAAGCTCT...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACAGGTTTCAGGTGGGTTaGACCCTGTGGGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDRFQVG*TLWDLP
Trigger: CGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCT...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCAATGCAGGCTTTTGTGTaGCTGACGCTTCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPMQAFV*LTLPFF
Trigger: GAAAAAGGGAAGCGTCAGCCACACAAAAGCCTGCAT...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TCTGTGGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGACCGGGCGCGGGCAGTTTTGTGCTCAGAGTTaGTTGAAATGGCTACGAAGT +
Preference number: 4 (lower is better)
Translates to: SVGTGRVRGRHPETGRGQFCAQS*LKWLRS
Trigger: ACTTCGTAGCCATTTCAACCAACTCTGAGCACAAAA...CTGCCCGCGCCCGGTCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGCCATGCATTGCGCGGTaGACCGCACGACGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWPCIAR*TARRSC
Trigger: GCAGGAGCGTCGTGCGGTCCACCGCGCAATGCATGG...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCAAGAGGCGGTTGGGCATaGAGTAGCCGGCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPARGGWA*SSRRPA
Trigger: TGCTGGACGCCGGCTACTTCATGCCCAACCGCCTCT...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGCGAAGAAGGACACTATaGCCTTCACGCAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTRRRTL*PSRSPR
Trigger: GCGTGGACTGCGTGAAGGGCATAGTGTCCTTCTTCG...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAAGCCGAGGTTCCCGGTaGTCGCTCCTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGSRGSR*SLLFTF
Trigger: GAAGGTGAAGAGGAGCGAGCACCGGGAACCTCGGCT...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCTGCTGTAGCGTGTGGTaGGTGACCATGTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: ATLPAVQRPGEGLETALGCCSVW*VTMSSA
Trigger: CGCGGAGGACATGGTCACGCACCACACGCTACAGCA...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGATGCTGTAGCGTGTGGTaGGTGACCATGTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGCCSVW*VTMSSA
Trigger: CGCGGAGGACATGGTCACGCACCACACGCTACAGCA...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAGCTGGATGGTCTCCCTaGAGAGGACCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGAGWSP*RGPGAL
Trigger: CAGAGCTCCTGGTCCTCTGCAGGGAGACCATCCAGC...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAGGACCCTGTGGGACTTaGCGTCTGAGGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGGPCGT*RLRDGW
Trigger: CCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCC...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGAGGAATCGCCATGCATTaGGCGGTGGACCGCACGACG +
Preference number: 4 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGGIAMH*AVDRTT
Trigger: CGTCGTGCGGTCCACCGCGCAATGCATGGCGATTCC...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTGTGAAGGACGCGATGTaGTCGGCCGCCCAGACGATG +
Preference number: 4 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRVKDAM*SAAQTM
Trigger: CATCGTCTGGGCGGCCGACCACATCGCGTCCTTCAC...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCGTCTGAGGGATGGATaGACTCCGAGCACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRRLRDG*TPSTLP
Trigger: GGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACG...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TTAAGGACTGGCCGTGATTCTTGGCAAGCTCCGCCCGCCAGGCCACCTCTCACCGTGGGTTGGACCCTGTaGGACTTGCCGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LRTGRDSWQAPPARPPLTVGWTL*DLPSEG
Trigger: TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCAC...GGTGAGAGGTGGCCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGTCCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CAA 72 bp GCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTaGCCGTCTGAGGGATGGATGGACTCCGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: AGRFQVGWTLWD*PSEGWMDSEHP
Trigger: AGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCTGTACAGAACCACGGTaGCTGCGTCGTTCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ATLPAVQRPGEGLETALGCTEPR*LRRSAA
Trigger: CGCTGCTGAACGACGCAGTCACCGTGGTTCTGTACA...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGCCCGGTACACGGAGATaGAGACCAGCGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWPGTRR*RPASGA
Trigger: TGCTCCTGACGCTGGTCTTCATCTCCGTGTACCGGG...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGAGTGGGACTTGCCGTCTaGGGGATGGATGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGVGLAV*GMDGLR
Trigger: TCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCAC...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACAAAAGTCACTGCGCTTaGTCTGATCCAAGTAACAGT +
Preference number: 4 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHKSHCA*SDPSNS
Trigger: ACTGTTACTTGGATCAGATCAAGCGCAGTGACTTTT...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGCAGCCTGGGCTGCCGTaGGTGAGGTGTTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWQPGLP*VRCSHS
Trigger: AGAGTGAGAACACCTCACTCACGGCAGCCCAGGCTG...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACGCTGCTCCAGAGACTaGATGTCCAGGCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGRCSRD*MSRQTA
Trigger: CGCTGTCTGCCTGGACATGCAGTCTCTGGAGCAGCG...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTCGCTGCTCCAGAGACTaGATGTCCAGGCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGRCSRD*MSRQTA
Trigger: CGCTGTCTGCCTGGACATGCAGTCTCTGGAGCAGCG...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGCTTCCCATTGGGGATaGTGCTGTTTCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDASHWG*CCFSAS
Trigger: AGAAGCGGAGAAACAGCAGCATCCCCAATGGGAAGC...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGCTGGAAGGGGTGGACGGAAGACGTTCCTaGCACTTTACCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: AEDQELCPRPRPGTLEGVDGRRS*HFTCSS
Trigger: TGAACTGCAGGTAAAGTGGCAGGAACGTCTTCCGTC...CACCCCTTCCAGCGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCCACCACTTCCACCGTaGAGGCAGGTTTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PEPWAGFTQIRLGRASVSPPLPP*RQVSGG
Trigger: CCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGG...GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCGATCTTGGCCAAGCTaGCCACGAGGATCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRRSWPS*PRGSRA
Trigger: CGCTCTGGATCCTCGTGGCCAGCTTGGCCAAGATCG...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCACGGTCTCGAGACTTCTaGGCCGACCGTCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPARSRDF*ADRLMR
Trigger: CCTCATGAGACGGTCGGCCCAGAAGTCTCGAGACCG...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGGGGGGCCCGGAACCTTaGGCTGGTTTCACGCAAATC +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWGGPEP*AGFTQI
Trigger: GATTTGCGTGAAACCAGCCCAAGGTTCCGGGCCCCC...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCAGTGGGTTGGACCCTGTaGGACTTGCCGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPAVGWTL*DLPSEG
Trigger: TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCAC...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACAATGGCTACGAAGTGTaGAGAATAACCACTGAATCC +
Preference number: 4 (lower is better)
Translates to: DGWTPSTLPGSAPAASAHNGYEV*RITTES
Trigger: GGATTCAGTGGTTATTCTCCACACTTCGTAGCCATT...GTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGTTGCTGCATAGAGGATaGCTGCATTTTGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LPGSAPAASAHSMDCASQLLHRG*LHFVLR
Trigger: TCTGAGCACAAAATGCAGCCATCCTCTATGCAGCAA...CTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAGCAGGGAACCAGGGCTaGCCTTGGATCTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGAGNQG*PWICPV
Trigger: TACTGGACAGATCCAAGGCCAGCCCTGGTTCCCTGC...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCAGAACCACGGTGACTaGGTCGTTCAGCAGCGACTC +
Preference number: 4 (lower is better)
Translates to: PEPWAGFTQIRLGRASVSQNHGD*VVQQRL
Trigger: GAGTCGCTGCTGAACGACGCAGTCACCGTGGTTCTG...GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTTCAGAAGCCAGGTCTaGAGGACCACACCGATGGCC +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGFRSQV*RTTPMA
Trigger: GGCCATCGGTGTGGTCCTGCAGACCTGGCTTCTGAA...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGTCGGCTGTACAGATaGTTGTACTCCTGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGCRLYR*LYSCRG
Trigger: GCCGCGGCAGGAGTACAAGCATCTGTACAGCCGACA...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCAGGGTTGTCAATTCCTaGAGGGGAGTCGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: ATLPAVQRPGEGLETALGRVVNS*RGVGRC
Trigger: ACAGCGTCCGACTCCCCTGCAGGAATTGACAACCCT...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTCAGGCGGCAGAAGGTaGCGGGAGAGTAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGSGGRR*RESRES
Trigger: AGATTCCCTACTCTCCCGGCACCTTCTGCCGCCTGA...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR GCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACTCCTGCCACTTTACCTaGAGTTCAAAGACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDSCHFT*SSKTWR
Trigger: TCGCCAGGTCTTTGAACTGCAGGTAAAGTGGCAGGA...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCCACTCAATGGACTGTaGCTCCCAGAGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PEPWAGFTQIRLGRASVSPLNGL*LPELGL
Trigger: CAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGG...GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTCCACTCAATGGACTGTaGCTCCCAGAGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGPLNGL*LPELGL
Trigger: CAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGG...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCACTGTTTCTCCGCTTCTaGGCACGCTCCCGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPALFLRF*ARSRLY
Trigger: GTACAAGCGGGAGCGTGCCCAGAAGCGGAGAAACAG...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCATCACGCAAATCCGTTTaGGGCGAGCCTCGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPASRKSV*GEPRFP
Trigger: GGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGA...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTCACGCAAATCCGTTTaGGGCGAGCCTCGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGSRKSV*GEPRFP
Trigger: GGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGA...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCATGCAGTTCAAAGACCTaGCGAGGGCCTGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPACSSKT*RGPGNG
Trigger: GCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCA...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGCAGGCAGGTTTCAGGTaGGTTGGACCCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWQAGFR*VGPCGT
Trigger: AGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTG...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGCCACCAGGGACTCAATaGGGACTCAATGTGCAATAT +
Preference number: 4 (lower is better)
Translates to: PRPPPTQWTVPPRAWAGWPPGTQ*GLNVQY
Trigger: ATATTGCACATTGAGTCCCCATTGAGTCCCTGGTGG...CCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTTTTAAGAACTCCTCCTaGCTGGTGACTGTCAACACT +
Preference number: 4 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWAFKNSS*LVTVNT
Trigger: AGTGTTGACAGTCACCAGTCAGGAGGAGTTCTTAAA...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGAGGCTTTTGTGTGGCTaGCGCTTCCCTTTTTCACAA +
Preference number: 4 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTRLLCG*RFPFSQ
Trigger: TTGTGAAAAAGGGAAGCGTCAGCCACACAAAAGCCT...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTCTGGGCAGGGCTTGCTaGATAGAGGATGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGLGRAC*IEDGCI
Trigger: AATGCAGCCATCCTCTATGCAGCAAGCCCTGCCCAG...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp CTCCCCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGTTTGTGTTTAGCCTGTaGAATTCTCGTCAACACAGA +
Preference number: 4 (lower is better)
Translates to: LPGSAPAASAHSMDCASQFVFSL*NSRQHR
Trigger: TCTGTGTTGACGAGAATTGCACAGGCTAAACACAAA...CTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGTACTGCTGTAGCGTGTaGTGCGTGACCATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWYCCSV*CVTMSS
Trigger: GGAGGACATGGTCACGCACCACACGCTACAGCAGTA...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTATCAATGGGAAATTGTaGACTTTTCCCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LQFKDLARAWKRRSAQAAINGKL*TFPTRD
Trigger: GTCCCTGGTGGGAAAAGTCCACAATTTCCCATTGAT...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACTTGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCTTTAAGAACTCCTCCTaGCTGGTGACTGTCAACACT +
Preference number: 4 (lower is better)
Translates to: TCRLRDGWTPSTLPGSAPFKNSS*LVTVNT
Trigger: AGTGTTGACAGTCACCAGTCAGGAGGAGTTCTTAAA...GGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACTGCATAGAGGATGGCTaGATTTTGTGCTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: GWSPCRGPGALSKASPWDCIEDG*ILCSEL
Trigger: CAACTCTGAGCACAAAATGCAGCCATCCTCTATGCA...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CCTAGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTCCCGGAACCTTGGGCTaGTTTCACGCAAATCCGTTT +
Preference number: 4 (lower is better)
Translates to: PRSVHLHHFHRAGRFQVGPGTLG*FHANPF
Trigger: AAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGGG...ACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGATCAATGGGAAATTGTaGACTTTTCCCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTINGKL*TFPTRD
Trigger: GTCCCTGGTGGGAAAAGTCCACAATTTCCCATTGAT...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCAGTGCTCAGAGTTGGTTaGAATGGCTACGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPAVLRVG*NGYEVW
Trigger: CCACACTTCGTAGCCATTTCAACCAACTCTGAGCAC...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TCCGAAGCAGCGGTCATGCAGGCTTTTGTGTGGCTGACGCTTCCCTTTTTCACACAGGCAGGTTTCAGGTaGGTTGGACCCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: SEAAVMQAFVWLTLPFFTQAGFR*VGPCGT
Trigger: AGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTG...TGTGAAAAAGGGAAGCGTCAGCCACACAAAAGCCTGCATGACCGCTGCTTCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGATGCAGGCTTTTGTGTaGCTGACGCTTCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWMQAFV*LTLPFF
Trigger: GAAAAAGGGAAGCGTCAGCCACACAAAAGCCTGCAT...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAAAAAGTCACTGCGCTTaGTCTGATCCAAGTAACAGT +
Preference number: 4 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGKSHCA*SDPSNS
Trigger: ACTGTTACTTGGATCAGATCAAGCGCAGTGACTTTT...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp ACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCGGCATGCATAGAGGATGGCTaGATTTTGTGCTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TLGWFHANPFGASLGFPACIEDG*ILCSEL
Trigger: CAACTCTGAGCACAAAATGCAGCCATCCTCTATGCA...TGCCGGGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TTCACAACAGTAAAAAGCTATCAATGGGAAATTGTGGACTTTTCCCACCAGGGAGTTCTGCGCAGGCGCTaGCGTGGGCGAGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: FTTVKSYQWEIVDFSHQGVLRRR*RGRGGA
Trigger: AGCCCCGCCTCGCCCACGCCAGCGCCTGCGCAGAAC...TCCCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGCTTTTTACTGTTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTTTGCTGCATAGAGGATaGCTGCATTTTGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRLLHRG*LHFVLR
Trigger: TCTGAGCACAAAATGCAGCCATCCTCTATGCAGCAA...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
3UTR CAA 72 bp TGGATCTGTCCAGTAGGGTCACTGACTGGGCAGGGCTaGCTGCATAGAGGATGGCTGCATTTTGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: WICPVGSLTGQG*LHRGWLHFVLR
Trigger: TCTGAGCACAAAATGCAGCCATCCTCTATGCAGCAAGCCCTGCCCAGTCAGTGACCCTACTGGACAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGGCCCACCCCCGGTGCTaGAGACCGACCAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLAHPRC*RPTSQG
Trigger: TCCTTGACTGGTCGGTCTTCAGCACCGGGGGTGGGC...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGGGGGGACAGAGCAGCTaGTGGGCCCCACCATCCACT +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLGGQSS*WAPPST
Trigger: AGTGGATGGTGGGGCCCAGCAGCTGCTCTGTCCCCC...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGTCGAAGGTGACCACCTaGAAGCCCCCGCTCTCGCCG +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLSKVTT*KPPLSP
Trigger: CGGCGAGAGCGGGGGCTTCCAGGTGGTCACCTTCGA...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCCAGAGTTGGTTGAAATaGCTACGAAGTGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PEPWAGFTQIRLGRASVSQSWLK*LRSVEN
Trigger: ATTCTCCACACTTCGTAGCCATTTCAACCAACTCTG...GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACAGAGTTGGTTGAAATaGCTACGAAGTGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGQSWLK*LRSVEN
Trigger: ATTCTCCACACTTCGTAGCCATTTCAACCAACTCTG...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGCGTGCAGCTTCTCGTTaGGCCGAGGTTCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLRAASR*AEVPGA
Trigger: AGCACCGGGAACCTCGGCTCAACGAGAAGCTGCACG...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TCCGAAGCAGCGGTCATGCAGGCTTTTGTGTGGCTGACGCTTCCCTTTTTCACAGGGACCACTTGTCTCTaGGATAATTGTGCCCGATCT +
Preference number: 4 (lower is better)
Translates to: SEAAVMQAFVWLTLPFFTGTTCL*DNCARS
Trigger: AGATCGGGCACAATTATCTCAGAGACAAGTGGTCCC...TGTGAAAAAGGGAAGCGTCAGCCACACAAAAGCCTGCATGACCGCTGCTTCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TTCACAACAGTAAAAAGCTATCAATGGGAAATTGTGGACTTTTCCCACCAGGGACGCTCGGGAGGTCCCTaGGTCGGTCCCCGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: FTTVKSYQWEIVDFSHQGRSGGP*VGPRVS
Trigger: ACTGACTCGGGGACCGACTCAGGGACCTCCCGAGCG...TCCCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGCTTTTTACTGTTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGTTTGTGTTTAGCCTGTaGAATTCTCGTCAACACAGA +
Preference number: 4 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWFVFSL*NSRQHR
Trigger: TCTGTGTTGACGAGAATTGCACAGGCTAAACACAAA...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGGCGCAGGGCTCTCCATaGGCAGCTTCCCATTGGGGA +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLAQGSP*AASHWG
Trigger: TCCCCAATGGGAAGCTGCCCATGGAGAGCCCTGCGC...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGGTGGGACTTGCCGTCTaGGGGATGGATGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLVGLAV*GMDGLR
Trigger: TCGGAGTCCATCCATCCCTCAGACGGCAAGTCCCAC...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGGGATGGTCCCCAGGTTaGCGAAGAAGAGGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLGWSPG*RRRGGW
Trigger: CCAACCGCCTCTTCTTCGGCAACCTGGGGACCATCC...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGCGGTCTCGAGACTTCTaGGCCGACCGTCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLRSRDF*ADRLMR
Trigger: CCTCATGAGACGGTCGGCCCAGAAGTCTCGAGACCG...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TTCACAACAGTAAAAAGCTATCAATGGGAAATTGTGGACTTTTCCCACCAGGGACACAGAACACCTGCCTaGCCACCCCCGGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FTTVKSYQWEIVDFSHQGHRTPA*PPPVLK
Trigger: CTTCAGCACCGGGGGTGGGCAGGCAGGTGTTCTGTG...TCCCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGCTTTTTACTGTTGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TTCACAACAGTAAAAAGCTATCAATGGGAAATTGTGGACTTTTCCCACCAGGGAATGGCCGAGAGGATGTaGTCGAAAGCGCGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: FTTVKSYQWEIVDFSHQGMAERM*SKARPC
Trigger: GCACGGGCGCGCTTTCGACCACATCCTCTCGGCCAT...TCCCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGCTTTTTACTGTTGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGAGTAAAAAGCTATCAATaGGAAATTGTGGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGVKSYQ*EIVDFS
Trigger: GGAAAAGTCCACAATTTCCCATTGATAGCTTTTTAC...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp CCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCGTAAAAAGCTATCAATaGGAAATTGTGGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: PEPWAGFTQIRLGRASVSVKSYQ*EIVDFS
Trigger: GGAAAAGTCCACAATTTCCCATTGATAGCTTTTTAC...GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR TCA 90 bp TTCACAACAGTAAAAAGCTATCAATGGGAAATTGTGGACTTTTCCCACCAGGGACCCGGTACACGGAGATaGAGACCAGCGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FTTVKSYQWEIVDFSHQGPGTRR*RPASGA
Trigger: TGCTCCTGACGCTGGTCTTCATCTCCGTGTACCGGG...TCCCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGCTTTTTACTGTTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGTACTGCTGTAGCGTGTaGTGCGTGACCATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLYCCSV*CVTMSS
Trigger: GGAGGACATGGTCACGCACCACACGCTACAGCAGTA...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR GCA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGGACGGAAGACGTTCCTaGCACTTTACCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YEVWRITTESQKVTALDLDGRRS*HFTCSS
Trigger: TGAACTGCAGGTAAAGTGGCAGGAACGTCTTCCGTC...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CCA 90 bp TTCACAACAGTAAAAAGCTATCAATGGGAAATTGTGGACTTTTCCCACCAGGGATTTTGTGCTCAGAGTTaGTTGAAATGGCTACGAAGT +
Preference number: 4 (lower is better)
Translates to: FTTVKSYQWEIVDFSHQGFCAQS*LKWLRS
Trigger: ACTTCGTAGCCATTTCAACCAACTCTGAGCACAAAA...TCCCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGCTTTTTACTGTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp ACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGCCGTGTCCGGGGCCGCCATCCACGCCAGTCACGTaGTCACCTCCCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: TAQAGDLVCGDGPCPGPPSTPVT*SPPSAT
Trigger: CGTGGCGCTGGGAGGTGACAACGTGACTGGCGTGGA...TGGCGGCCCCGGACACGGCCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp TGCGGGCGCAGGCGCGGCACTCTCGGAGTTCTGCGCAGGCGCTGGCGTGGGCGATGGAATCGCCATGCATaGCGCGGTGGACCGCACGAC +
Preference number: 5 (lower is better)
Translates to: CGRRRGTLGVLRRRWRGRWNRHA*RGGPHD
Trigger: GTCGTGCGGTCCACCGCGCAATGCATGGCGATTCCA...TCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR CAA 90 bp ACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGTCCACGCCAGTCACGTaGTCACCTCCCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: TSAPGATAQAGDLVCGDGSTPVT*SPPSAT
Trigger: CGTGGCGCTGGGAGGTGACAACGTGACTGGCGTGGA...CCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp TCTGTGGGGACGGGCCGTGTCCGGGGCCGCCACCCTGAGACCGGGCGCGGGCAGATGATACGCACATGCTaGGTGAAGCGCGTCACCAGC +
Preference number: 5 (lower is better)
Translates to: SVGTGRVRGRHPETGRGQMIRTC*VKRVTS
Trigger: GCTGGTGACGCGCTTCACCAAGCATGTGCGTATCAT...CTGCCCGCGCCCGGTCTCAGGGTGGCGGCCCCGGACACGGCCCGTCCCCACAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS GCA 90 bp CTGGGATTCCCAGGGCATCAGAAGGCCCATCAGCCTCCCGTGAACTaGTGGGGTGGGCCTGGCCTTGGGACGCGGGTGCAGGGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LGFPGHQKAHQPPVN*WGGPGLGTRVQGPL
Trigger: GAGAGGCCCCTGCACCCGCGTCCCAAGGCCAGGCCCACCCCAGCAGTTCACGGGAGGCTGATGGGCCTTCTGATGCCCTGGGAATCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507407.1
CDS-3UTR CAA 90 bp TGCGGGCGCAGGCGCGGCACTCTCGGAGTTCTGCGCAGGCGCTGGCGTGGGCGATTCACGCAAATCCGTTaGGGGCGAGCCTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: CGRRRGTLGVLRRRWRGRFTQIR*GRASVS
Trigger: GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAA...TCGCCCACGCCAGCGCCTGCGCAGAACTCCGAGAGTGCCGCGCCTGCGCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR CAA 90 bp ACCTCCGCGCCAGGTGCGACAGCTCAGGCCGGAGACCTCGTCTGTGGGGACGGGTGTGCCTCCCAGAGCTaGGGCTGGATGGTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: TSAPGATAQAGDLVCGDGCASQS*GWMVSL
Trigger: CAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACA...CCCGTCCCCACAGACGAGGTCTCCGGCCTGAGCTGTCGCACCTGGCGCGGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp CCGGCTCAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTAGGTGGAACCCGATCTaGGCCAAGCTGGCCACGAGG +
Preference number: 5 (lower is better)
Translates to: PAQHPRPPPTQWTVPPRARWNPI*AKLATR
Trigger: CCTCGTGGCCAGCTTGGCCAAGATCGGGTTCCACCT...AGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTGAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp GGATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACTCCACGTTGACCACGTaGTCGGTGCTGGGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: GWSPCRGPGALSKASPWDSTLTT*SVLGER
Trigger: CCGCTCCCCCAGCACCGACAACGTGGTCAACGTGGA...GTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp CTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCCAGGCCGCTAAGGAGTCCACGGACTaGCTGCTGAGGCGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LQFKDLARAWKRRSAQAAKESTD*LLRRKG
Trigger: GCCCTTCCGCCTCAGCAGCAAGTCCGTGGACTCCTT...AGCGGCCTGGGCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR CAA 90 bp ACTTGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCAGGTGGAACCCGATCTaGGCCAAGCTGGCCACGAGG +
Preference number: 5 (lower is better)
Translates to: TCRLRDGWTPSTLPGSAPRWNPI*AKLATR
Trigger: CCTCGTGGCCAGCTTGGCCAAGATCGGGTTCCACCT...GGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATTGTGCCTCCCAGAGCTaGGGCTGGATGGTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDCASQS*GWMVSL
Trigger: CAGGGAGACCATCCAGCCCAAGCTCTGGGAGGCACA...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp GCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGCTGGAAGGGGTGTGGACCCTGTGGGACTaGCCGTCTGAGGGATGGATG +
Preference number: 5 (lower is better)
Translates to: AEDQELCPRPRPGTLEGVWTLWD*PSEGWM
Trigger: CATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCA...CACCCCTTCCAGCGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGACCGTGCAGCTTCTCGTaGAGCCGAGGTTCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGPCSFS*SRGSRC
Trigger: GCACCGGGAACCTCGGCTCAACGAGAAGCTGCACGG...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCTCCACGTTGACCACGTaGTCGGTGCTGGGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: ATLPAVQRPGEGLETALGSTLTT*SVLGER
Trigger: CCGCTCCCCCAGCACCGACAACGTGGTCAACGTGGA...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATCGGCTGTACAGATGCTaGTACTCCTGCCGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDRLYRC*YSCRGL
Trigger: CAAGCCGCGGCAGGAGTACAAGCATCTGTACAGCCG...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp CCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATGGTCGGACGCTGTGTCCTaGGTGACACTAGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PRPPPTQWTVPPRAWAGWSDAVS*VTLARN
Trigger: GTTCCTGGCTAGTGTCACCAAGGACACAGCGTCCGA...CCATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp ACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGGATTGGACCCTGTGGGACTaGCCGTCTGAGGGATGGATG +
Preference number: 5 (lower is better)
Translates to: TRGLRPLNGLCLPELGLDWTLWD*PSEGWM
Trigger: CATCCATCCCTCAGACGGCAAGTCCCACAGGGTCCA...ATCCAGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp AGGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGCCGTGCAGCTTCTCGTaGAGCCGAGGTTCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: RSVHLHHFHRAGRFQVGWPCSFS*SRGSRC
Trigger: GCACCGGGAACCTCGGCTCAACGAGAAGCTGCACGG...CCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp GATGGTCTCCCTGCAGAGGACCAGGAGCTCTGTCCAAGGCCTCGCCCTGGGACGTCGGACGCTGTGTCCTaGGTGACACTAGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: DGLPAEDQELCPRPRPGTSDAVS*VTLARN
Trigger: GTTCCTGGCTAGTGTCACCAAGGACACAGCGTCCGA...CGTCCCAGGGCGAGGCCTTGGACAGAGCTCCTGGTCCTCTGCAGGGAGACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp ACTTGCCGTCTGAGGGATGGATGGACTCCGAGCACCCTCCCCGGCTCAGCACCCTCCATGCCCCCTGGTTaGTTAAGGGGGACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: TCRLRDGWTPSTLPGSAPSMPPG*LRGTEQ
Trigger: CTGCTCTGTCCCCCTTAACAAACCAGGGGGCATGGA...GGGTGCTGAGCCGGGGAGGGTGCTCGGAGTCCATCCATCCCTCAGACGGCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp GCCACTTTACCTGCAGTTCAAAGACCTGGCGAGGGCCTGGAAACGGCGCTCGGCCTGACTGGGCAGGGCTaGCTGCATAGAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: ATLPAVQRPGEGLETALGLTGQG*LHRGWL
Trigger: CAGCCATCCTCTATGCAGCAAGCCCTGCCCAGTCAG...GCCGAGCGCCGTTTCCAGGCCCTCGCCAGGTCTTTGAACTGCAGGTAAAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp TTAAGGACTGGCCGTGATTCTTGGCAAGCTCCGCCCGCCAGGCCACCTCTCACCGAACCAGGGCTGGCCTaGGATCTGTCCAGTAGGGTC +
Preference number: 5 (lower is better)
Translates to: LRTGRDSWQAPPARPPLTEPGLA*DLSSRV
Trigger: GACCCTACTGGACAGATCCAAGGCCAGCCCTGGTTC...GGTGAGAGGTGGCCTGGCGGGCGGAGCTTGCCAAGAATCACGGCCAGTCCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp CCGGAACCTTGGGCTGGTTTCACGCAAATCCGTTTGGGGCGAGCCTCGGTTTCCTGGAATCGCCATGCATaGCGCGGTGGACCGCACGAC +
Preference number: 5 (lower is better)
Translates to: PEPWAGFTQIRLGRASVSWNRHA*RGGPHD
Trigger: GTCGTGCGGTCCACCGCGCAATGCATGGCGATTCCA...GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAAACCAGCCCAAGGTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGATTCACGCAAATCCGTTaGGGGCGAGCCTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGFTQIR*GRASVS
Trigger: GGAAACCGAGGCTCGCCCCAAACGGATTTGCGTGAA...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGACTGGGCAGGGCTaGCTGCATAGAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRLTGQG*LHRGWL
Trigger: CAGCCATCCTCTATGCAGCAAGCCCTGCCCAGTCAG...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp CAGCACCCGCGGCCTCCGCCCACTCAATGGACTGTGCCTCCCAGAGCTTGGGCTGCTATCAATGGGAAATaGTGGACTTTTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: QHPRPPPTQWTVPPRAWAAINGK*WTFPTR
Trigger: CCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGC...AGCCCAAGCTCTGGGAGGCACAGTCCATTGAGTGGGCGGAGGCCGCGGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGAGGAGAAAACACAGGGTaGTCAATTCCTGCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGGENTG*SIPAGE
Trigger: CTCCCCTGCAGGAATTGACAACCCTGTGTTTTCTCC...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264938.8
CDS-3UTR CAA 90 bp TCCGAAGCAGCGGTCATGCAGGCTTTTGTGTGGCTGACGCTTCCCTTTTTCACACGGCTGTACAGATGCTaGTACTCCTGCCGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: SEAAVMQAFVWLTLPFFTRLYRC*YSCRGL
Trigger: CAAGCCGCGGCAGGAGTACAAGCATCTGTACAGCCG...TGTGAAAAAGGGAAGCGTCAGCCACACAAAAGCCTGCATGACCGCTGCTTCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp CGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTCTGAGGGAGAGGATGGCTGCATTTaGTGCTCAGAGTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: RAGRFQVGWTLWDLPSEGEDGCI*CSELVE
Trigger: TTCAACCAACTCTGAGCACAAAATGCAGCCATCCTC...TCCCTCAGACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp ACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGACCCTGTGGGACTTGCCGTTGTGCTCAGAGTTGGTaGAAATGGCTACGAAGTGTG +
Preference number: 5 (lower is better)
Translates to: TSTVQAGFRWVGPCGTCRCAQSW*KWLRSV
Trigger: CACACTTCGTAGCCATTTCAACCAACTCTGAGCACA...ACGGCAAGTCCCACAGGGTCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp GGAGTGTCCACCTCCACCACTTCCACCGTGCAGGCAGGTTTCAGGTGGGTTGGAGAGGATGGCTGCATTTaGTGCTCAGAGTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: GVSTSTTSTVQAGFRWVGEDGCI*CSELVE
Trigger: TTCAACCAACTCTGAGCACAAAATGCAGCCATCCTC...TCCAACCCACCTGAAACCTGCCTGCACGGTGGAAGTGGTGGAGGTGGACACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp TCCGAAGCAGCGGTCATGCAGGCTTTTGTGTGGCTGACGCTTCCCTTTTTCACAGCTATCAATGGGAAATaGTGGACTTTTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: SEAAVMQAFVWLTLPFFTAINGK*WTFPTR
Trigger: CCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGC...TGTGAAAAAGGGAAGCGTCAGCCACACAAAAGCCTGCATGACCGCTGCTTCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp TTCACAACAGTAAAAAGCTATCAATGGGAAATTGTGGACTTTTCCCACCAGGGATCCATGCCCCCTGGTTaGTTAAGGGGGACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: FTTVKSYQWEIVDFSHQGSMPPG*LRGTEQ
Trigger: CTGCTCTGTCCCCCTTAACAAACCAGGGGGCATGGA...TCCCTGGTGGGAAAAGTCCACAATTTCCCATTGATAGCTTTTTACTGTTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS-3UTR CAA 90 bp TACGAAGTGTGGAGAATAACCACTGAATCCCAAAAAGTCACTGCGCTTGATCTGTGTGCTCAGAGTTGGTaGAAATGGCTACGAAGTGTG +
Preference number: 5 (lower is better)
Translates to: YEVWRITTESQKVTALDLCAQSW*KWLRSV
Trigger: CACACTTCGTAGCCATTTCAACCAACTCTGAGCACA...CAGATCAAGCGCAGTGACTTTTTGGGATTCAGTGGTTATTCTCCACACTTCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264938.8
ENST00000644203.1
CDS GCA 72 bp CCAGGGCATCAGAAGGCCCATCAGCCTCCCGTGAACTaGTGGGGTGGGCCTGGCCTTGGGACGCGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: PGHQKAHQPPVN*WGGPGLGTRVQ
Trigger: CTGCACCCGCGTCCCAAGGCCAGGCCCACCCCAGCAGTTCACGGGAGGCTGATGGGCCTTCTGATGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507407.1
CDS GCA 72 bp ACCATGTCCTCCGCGTCCCGGATGCTCCGCCGTCGCTaGTCCAGAGACTGCATGTCCAGGCAGACAGCGCTG +
Preference number: 6 (lower is better)
Translates to: TMSSASRMLRRR*SRDCMSRQTAL
Trigger: CAGCGCTGTCTGCCTGGACATGCAGTCTCTGGAGCAGCGACGGCGGAGCATCCGGGACGCGGAGGACATGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264938.8
ENST00000514375.1
ENST00000644203.1
CDS GCA 72 bp CCTGCTGCAGCCCCGACCCGGCAGAGCAAGCGGCTCTaGTACCTCAGCCACGTAGCTGATGGCATCCTTCAG +
Preference number: 6 (lower is better)
Translates to: PAAAPTRQSKRL*YLSHVADGILQ
Trigger: CTGAAGGATGCCATCAGCTACGTGGCTGAGGTAGCAGAGCCGCTTGCTCTGCCGGGTCGGGGCTGCAGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507407.1
CDS TCA 72 bp TCTGCAGGACCACACCGATGGCCCGGTACACGGAGATaGAGACCAGCGTCAGGAGCACGAAGGCCGTGTTCC +
Preference number: 6 (lower is better)
Translates to: SAGPHRWPGTRR*RPASGARRPCS
Trigger: GGAACACGGCCTTCGTGCTCCTGACGCTGGTCTTCATCTCCGTGTACCGGGCCATCGGTGTGGTCCTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264938.8
ENST00000514375.1
ENST00000644203.1
CDS GCA 72 bp GCGTCCCGGATGCTCCGCCGTCGCTGCTCCAGAGACTaGATGTCCAGGCAGACAGCGCTGACATTTTCTCTC +
Preference number: 6 (lower is better)
Translates to: ASRMLRRRCSRD*MSRQTALTFSL
Trigger: GAGAGAAAATGTCAGCGCTGTCTGCCTGGACATGCAGTCTCTGGAGCAGCGACGGCGGAGCATCCGGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264938.8
ENST00000514375.1
ENST00000644203.1
CDS CAA 72 bp GACACTATGCCCTTCACGCAGTCCACGCCAGTCACGTaGTCACCTCCCAGCGCCACGAAAGATTCAAACACA +
Preference number: 6 (lower is better)
Translates to: DTMPFTQSTPVT*SPPSATKDSNT
Trigger: TGTGTTTGAATCTTTCGTGGCGCTGGGAGGTGACAACGTGACTGGCGTGGACTGCGTGAAGGGCATAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264938.8
ENST00000514375.1
ENST00000644203.1