RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC9A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000115616

Ensembl transcript IDs: ENST00000233969.3, ENST00000467657.1, ENST00000469286.1

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCATAAGGTGTCTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTaGTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGAGCTTA +
Preference number: 1 (lower is better)
Translates to: VIRCLCFQLCSSLTG*SIGSGQGKASTLSL
Trigger: TAAGCTCAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAGACACCTTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 90 bp GGGGCCTCCAATCTGCACTGCAGGAGTCAGGCCATTCCTTCTGCATaGCGTTCCGATTGTTTGCCCAGTTTGAGTCATAAGGTGTCTCTG +
Preference number: 1 (lower is better)
Translates to: GASNLHCRSQAIPSA*RSDCLPSLSHKVSL
Trigger: CAGAGACACCTTATGACTCAAACTGGGCAAACAATCGGAACGTCATGCAGAAGGAATGGCCTGACTCCTGCAGTGCAGATTGGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 90 bp CAGCAAGTTGTAACCAGGTGCTGCCCTGTGGCCCTACTTGCCACATaGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCT +
Preference number: 1 (lower is better)
Translates to: QQVVTRCCPVALLAT*TLMGGTSSKAAPKS
Trigger: AGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGGCCACAGGGCAGCACCTGGTTACAACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 90 bp CCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTaGTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCA +
Preference number: 1 (lower is better)
Translates to: PTCHMDPHGWNFIKS*SQICQHSKLVDVWA
Trigger: TGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 90 bp GTCAGGCCATTCCTTCTGCATGACGTTCCGATTGTTTGCCCAGTTTaGGTCATAAGGTGTCTCTGCTTCCAGCTGTGCTCTTCACTTACC +
Preference number: 1 (lower is better)
Translates to: VRPFLLHDVPIVCPV*VIRCLCFQLCSSLT
Trigger: GGTAAGTGAAGAGCACAGCTGGAAGCAGAGACACCTTATGACTCAAACTGGGCAAACAATCGGAACGTCATGCAGAAGGAATGGCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 90 bp ACAGAGAGTTTTACATGGATTCCACTGTTGCATCAGGTTTCAGAGTaGCAAACCACAGCTGTCCTGGGTCAGACACTCAGATCTGCTTTC +
Preference number: 1 (lower is better)
Translates to: TESFTWIPLLHQVSE*QTTAVLGQTLRSAF
Trigger: GAAAGCAGATCTGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACAGTGGAATCCATGTAAAACTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 90 bp GGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTaGTGGATGTCTGGGCAACCTTTCTCTCTGCACCATTTAAACAAG +
Preference number: 1 (lower is better)
Translates to: GTSSKAAPKSVNTVS*WMSGQPFSLHHLNK
Trigger: CTTGTTTAAATGGTGCAGAGAGAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 90 bp CAGAAGTATTTAGATGCACAGAGAGTTTTACATGGATTCCACTGTTaGATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGA +
Preference number: 1 (lower is better)
Translates to: QKYLDAQRVLHGFHC*IRFQSDKPQLSWVR
Trigger: TCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACAGTGGAATCCATGTAAAACTCTCTGTGCATCTAAATACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 90 bp ACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTaGATGTCTGGGCAACCTTTCTCTCTGCACCATTTAAACAAGAAG +
Preference number: 1 (lower is better)
Translates to: TSSKAAPKSVNTVSW*MSGQPFSLHHLNKK
Trigger: CTTCTTGTTTAAATGGTGCAGAGAGAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 90 bp AAGATCCACAGTCACATTGGAACTTTGGTTGGATCAAGTGTTGTTTaGACGAACGAAAGCCTTTACAAAGGGCTACGGCTCTCTCTACTA +
Preference number: 1 (lower is better)
Translates to: KIHSHIGTLVGSSVV*TNESLYKGLRLSLL
Trigger: TAGTAGAGAGAGCCGTAGCCCTTTGTAAAGGCTTTCGTTCGTCCAAACAACACTTGATCCAACCAAAGTTCCAATGTGACTGTGGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 90 bp CACTTGCATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTaGGTGGCTTCATTTAATTTCTACACTCAGAAATGCAGAGGCATG +
Preference number: 1 (lower is better)
Translates to: HLHPLGYLQWEIKGL*VASFNFYTQKCRGM
Trigger: CATGCCTCTGCATTTCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 90 bp TTTTCATGTTCTCCTCCTGATAATACTGTAGGCACTTGCATCCTTTaGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCAT +
Preference number: 1 (lower is better)
Translates to: FSCSPPDNTVGTCIL*GIFSGKSKDCEWLH
Trigger: ATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTACAGTATTATCAGGAGGAGAACATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 90 bp ATTCGATTTTCCTTTTCTTCGGATTTGCCTCATTTATCCGTGGCATaGATCTGTCGCCCTCCAGAAGTATTTAGATGCACAGAGAGTTTT +
Preference number: 1 (lower is better)
Translates to: IRFSFSSDLPHLSVA*ICRPPEVFRCTESF
Trigger: AAAACTCTCTGTGCATCTAAATACTTCTGGAGGGCGACAGATTCATGCCACGGATAAATGAGGCAAATCCGAAGAAAAGGAAAATCGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 90 bp GTCTTAATATTTTCATGTTCTCCTCCTGATAATACTGTAGGCACTTaGATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAG +
Preference number: 1 (lower is better)
Translates to: VLIFSCSPPDNTVGT*ILWGIFSGKSKDCE
Trigger: CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTACAGTATTATCAGGAGGAGAACATGAAAATATTAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 90 bp AAGGAATTGTGCTCCTATGAACTTGTACCTTGTGTATCTAACCTTTaGTCTGTCTCATGCTCAACAATCCAGCAGTATTCTAAGACTTTA +
Preference number: 1 (lower is better)
Translates to: KELCSYELVPCVSNL*SVSCSTIQQYSKTL
Trigger: TAAAGTCTTAGAATACTGCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGGAGCACAATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 90 bp TTGTGTCTACAAACTTTCTTCTTTGTCTGCTTGGAGCCTCTAACCTaGAGGCTCAAAATTCAAACAACACTCTACAGAAAAATTCTACTG +
Preference number: 1 (lower is better)
Translates to: LCLQTFFFVCLEPLT*RLKIQTTLYRKILL
Trigger: CAGTAGAATTTTTCTGTAGAGTGTTGTTTGAATTTTGAGCCTCCAGGTTAGAGGCTCCAAGCAGACAAAGAAGAAAGTTTGTAGACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 90 bp TCCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATaGTCAACAATCCAGCAGTATTCTAAGACTTTAGAACATGAGAAA +
Preference number: 1 (lower is better)
Translates to: SYELVPCVSNLCSVS*STIQQYSKTLEHEK
Trigger: TTTCTCATGTTCTAAAGTCTTAGAATACTGCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCACTGGGGCCTCCAATCTaGACTGCAGGAGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPLGPPI*TAGVRP
Trigger: TGGCCTGACTCCTGCAGTGCAGATTGGAGGCCCCAG...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR TCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCACATCAGGTTTCAGAGTaGCAAACCACAGCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPHQVSE*QTTAVL
Trigger: CAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATG...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR TCA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCCATTTATCCGTGGCATaGATCTGTCGCCCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFHLSVA*ICRPPE
Trigger: TTCTGGAGGGCGACAGATTCATGCCACGGATAAATG...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp GTAGGCACTTGCATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAGGCCTCCAATCTGCACTaGAGGAGTCAGGCCATTCCT +
Preference number: 2 (lower is better)
Translates to: VGTCILWGIFSGKSKDCEASNLH*RSQAIP
Trigger: AGGAATGGCCTGACTCCTGCAGTGCAGATTGGAGGC...CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CCA 90 bp GTAGGCACTTGCATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAGGCCCTACTTGCCACATaGACCCTCATGGGTGGAACT +
Preference number: 2 (lower is better)
Translates to: VGTCILWGIFSGKSKDCEALLAT*TLMGGT
Trigger: AGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGGC...CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTGTCATAAGGTGTCTCTaGTTCCAGCTGTGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSVIRCL*FQLCSS
Trigger: TGAAGAGCACAGCTGGAAGCAGAGACACCTTATGAC...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCTTCACTTACCGGCTaGTCCATCGGGTCAGGACAG +
Preference number: 2 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQSSLTG*SIGSGQ
Trigger: CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp GAGGTAACAAATTACAGACTAGTGCAAAACAGTAGGACTCCCACATTCTCCAAACTCTGCTTCCAGCTGTaGTCTTCACTTACCGGCTGC +
Preference number: 2 (lower is better)
Translates to: EVTNYRLVQNSRTPTFSKLCFQL*SSLTGC
Trigger: GCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG...TTTGGAGAATGTGGGAGTCCTACTGTTTTGCACTAGTCTGTAATTTGTTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR TCA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCGCCATTCCTTCTGCATaGCGTTCCGATTGTTTGCCC +
Preference number: 2 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPAIPSA*RSDCLP
Trigger: GGGCAAACAATCGGAACGTCATGCAGAAGGAATGGC...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CAA 90 bp AAAGATCCACAGTCACATTGGAACTTTGGTTGGATCAAGTGTTGTTaGGACGAACGAAAGCCTTTACAAAGGGCTACGGCTCTCTCTACT +
Preference number: 2 (lower is better)
Translates to: KDPQSHWNFGWIKCC*DERKPLQRATALST
Trigger: AGTAGAGAGAGCCGTAGCCCTTTGTAAAGGCTTTCGTTCGTCCAAACAACACTTGATCCAACCAAAGTTCCAATGTGACTGTGGATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp GTAGGCACTTGCATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAGCCAGAAGTATTTAGATaGACAGAGAGTTTTACATGG +
Preference number: 2 (lower is better)
Translates to: VGTCILWGIFSGKSKDCEPEVFR*TESFTW
Trigger: CCATGTAAAACTCTCTGTGCATCTAAATACTTCTGG...CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCTCAGGCCATTCCTTCTaGATGACGTTCCGATTGTTT +
Preference number: 2 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSSGHSF*MTFRLF
Trigger: AAACAATCGGAACGTCATGCAGAAGGAATGGCCTGA...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGGCCATCCTTCACCCCTaGGAAAGAAAGCTGTTCTCG +
Preference number: 2 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQAILHP*ERKLFS
Trigger: CGAGAACAGCTTTCTTTCCCAGGGGTGAAGGATGGC...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CCA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAACCACATGGACCCTCATaGGTGGAACTTCATCAAAAG +
Preference number: 2 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQPHGPS*VELHQK
Trigger: CTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGG...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp CCCCAAACACACAGTAGACAGAGGAACAAGTTAAAAACCAGTAGACTCTCAGTACCTTTTCTTCGGATTTaGCTCATTTATCCGTGGCAT +
Preference number: 2 (lower is better)
Translates to: PQTHSRQRNKLKTSRLSVPFLRI*LIYPWH
Trigger: ATGCCACGGATAAATGAGGCAAATCCGAAGAAAAGG...TACTGAGAGTCTACTGGTTTTTAACTTGTTCCTCTGTCTACTGTGTGTTTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGAGATTGACTTCTCCTTaGTGGTGGAGGTGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQRLTSP*WWRWRR
Trigger: CCTTCTCCACCTCCACCAGCAAGGAGAAGTCAATCT...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CAA 90 bp TTCTGTGCTACTTTCCCTGAATCAAGGAATTGTGCTCCTATGAACTaGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAA +
Preference number: 2 (lower is better)
Translates to: FCATFPESRNCAPMN*YLVYLTFALSHAQQ
Trigger: TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGGAGCACAATTCCTTGATTCAGGGAAAGTAGCACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR TCA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCGGAATTGTGCTCCTATaGACTTGTACCTTGTGTATC +
Preference number: 2 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPGIVLL*TCTLCI
Trigger: GATACACAAGGTACAAGTTCATAGGAGCACAATTCC...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCCTTTGCTCTGTCTCATaGTCAACAATCCAGCAGTAT +
Preference number: 2 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPLCSVS*STIQQY
Trigger: ATACTGCTGGATTGTTGAGCATGAGACAGAGCAAAG...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR GCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGCATGGATTCCACTGTTaGATCAGGTTTCAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQHGFHC*IRFQSD
Trigger: GTCACTCTGAAACCTGATGCAACAGTGGAATCCATG...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CAA 90 bp TGCAATGTTAGAATATTGTGTCTACAAACTTTCTTCTTTGTCTGCTaGGAGCCTCTAACCTGGAGGCTCAAAATTCAAACAACACTCTAC +
Preference number: 2 (lower is better)
Translates to: CNVRILCLQTFFFVC*EPLTWRLKIQTTLY
Trigger: GTAGAGTGTTGTTTGAATTTTGAGCCTCCAGGTTAGAGGCTCCAAGCAGACAAAGAAGAAAGTTTGTAGACACAATATTCTAACATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAACAGAGAGTTTTACATaGATTCCACTGTTGCATCAG +
Preference number: 2 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRTESFT*IPLLHQ
Trigger: CTGATGCAACAGTGGAATCCATGTAAAACTCTCTGT...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGGTCACATTGGAACTTTaGTTGGATCAAGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQVTLEL*LDQVLF
Trigger: AAACAACACTTGATCCAACCAAAGTTCCAATGTGAC...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 72 bp TGTCTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTaGTCCATCGGGTCAGGACAGGGAAAAGCTTCCACG +
Preference number: 3 (lower is better)
Translates to: CLCFQLCSSLTG*SIGSGQGKAST
Trigger: CGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 72 bp GCACAACATAAAACCCACCAGCAAGTTGTAACCAGGTaGTGCCCTGTGGCCCTACTTGCCACATGGACCCTC +
Preference number: 3 (lower is better)
Translates to: AQHKTHQQVVTR*CPVALLATWTL
Trigger: GAGGGTCCATGTGGCAAGTAGGGCCACAGGGCAGCACCTGGTTACAACTTGCTGGTGGGTTTTATGTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 72 bp GTAACCAGGTGCTGCCCTGTGGCCCTACTTGCCACATaGACCCTCATGGGTGGAACTTCATCAAAAGCTGCT +
Preference number: 3 (lower is better)
Translates to: VTRCCPVALLAT*TLMGGTSSKAA
Trigger: AGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGGCCACAGGGCAGCACCTGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 72 bp CAACATAAAACCCACCAGCAAGTTGTAACCAGGTGCTaGCCTGTGGCCCTACTTGCCACATGGACCCTCATG +
Preference number: 3 (lower is better)
Translates to: QHKTHQQVVTRC*PVALLATWTLM
Trigger: CATGAGGGTCCATGTGGCAAGTAGGGCCACAGGGCAGCACCTGGTTACAACTTGCTGGTGGGTTTTATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 72 bp TTCCTTCTGCATGACGTTCCGATTGTTTGCCCAGTTTaGGTCATAAGGTGTCTCTGCTTCCAGCTGTGCTCT +
Preference number: 3 (lower is better)
Translates to: FLLHDVPIVCPV*VIRCLCFQLCS
Trigger: AGAGCACAGCTGGAAGCAGAGACACCTTATGACTCAAACTGGGCAAACAATCGGAACGTCATGCAGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 72 bp AATCTGCACTGCAGGAGTCAGGCCATTCCTTCTGCATaGCGTTCCGATTGTTTGCCCAGTTTGAGTCATAAG +
Preference number: 3 (lower is better)
Translates to: NLHCRSQAIPSA*RSDCLPSLSHK
Trigger: CTTATGACTCAAACTGGGCAAACAATCGGAACGTCATGCAGAAGGAATGGCCTGACTCCTGCAGTGCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 72 bp CACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTaGTCCCAAATCTGTCAACACAGTAAGCTGGTGGAT +
Preference number: 3 (lower is better)
Translates to: HMDPHGWNFIKS*SQICQHSKLVD
Trigger: ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 72 bp TCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTaGTGGATGTCTGGGCAACCTTTCTCTCTGCACCAT +
Preference number: 3 (lower is better)
Translates to: SKAAPKSVNTVS*WMSGQPFSLHH
Trigger: ATGGTGCAGAGAGAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CAA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTTGCATGACGTTCCGATaGTTTGCCCAGTTTGAGTCA +
Preference number: 3 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSCMTFR*FAQFES
Trigger: TGACTCAAACTGGGCAAACAATCGGAACGTCATGCA...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 72 bp TTTACATGGATTCCACTGTTGCATCAGGTTTCAGAGTaGCAAACCACAGCTGTCCTGGGTCAGACACTCAGA +
Preference number: 3 (lower is better)
Translates to: FTWIPLLHQVSE*QTTAVLGQTLR
Trigger: TCTGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACAGTGGAATCCATGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 72 bp AAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTaGATGTCTGGGCAACCTTTCTCTCTGCACCATTTA +
Preference number: 3 (lower is better)
Translates to: KAAPKSVNTVSW*MSGQPFSLHHL
Trigger: TAAATGGTGCAGAGAGAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CAA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCTTCTTCTTTGTCTGCTaGGAGCCTCTAACCTGGAGG +
Preference number: 3 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSFFFVC*EPLTWR
Trigger: CCTCCAGGTTAGAGGCTCCAAGCAGACAAAGAAGAA...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 72 bp TCTCCTCCTGATAATACTGTAGGCACTTGCATCCTTTaGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAG +
Preference number: 3 (lower is better)
Translates to: SPPDNTVGTCIL*GIFSGKSKDCE
Trigger: CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTACAGTATTATCAGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 72 bp AAAAAGTGTAGATTGACTTCTCCTTGCTGGTGGAGGTaGAGAAGGGGTGGAGAACAACTGCTGAGGATTTTT +
Preference number: 3 (lower is better)
Translates to: KKCRLTSPCWWR*RRGGEQLLRIF
Trigger: AAAAATCCTCAGCAGTTGTTCTCCACCCCTTCTCCACCTCCACCAGCAAGGAGAAGTCAATCTACACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 72 bp AGTCACATTGGAACTTTGGTTGGATCAAGTGTTGTTTaGACGAACGAAAGCCTTTACAAAGGGCTACGGCTC +
Preference number: 3 (lower is better)
Translates to: SHIGTLVGSSVV*TNESLYKGLRL
Trigger: GAGCCGTAGCCCTTTGTAAAGGCTTTCGTTCGTCCAAACAACACTTGATCCAACCAAAGTTCCAATGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 72 bp TCCTTTTCTTCGGATTTGCCTCATTTATCCGTGGCATaGATCTGTCGCCCTCCAGAAGTATTTAGATGCACA +
Preference number: 3 (lower is better)
Translates to: SFSSDLPHLSVA*ICRPPEVFRCT
Trigger: TGTGCATCTAAATACTTCTGGAGGGCGACAGATTCATGCCACGGATAAATGAGGCAAATCCGAAGAAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 72 bp TTAGATGCACAGAGAGTTTTACATGGATTCCACTGTTaGATCAGGTTTCAGAGTGACAAACCACAGCTGTCC +
Preference number: 3 (lower is better)
Translates to: LDAQRVLHGFHC*IRFQSDKPQLS
Trigger: GGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACAGTGGAATCCATGTAAAACTCTCTGTGCATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CAA 90 bp CCCCAAACACACAGTAGACAGAGGAACAAGTTAAAAACCAGTAGACTCTCAGTAGATTGTTTGCCCAGTTaGAGTCATAAGGTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: PQTHSRQRNKLKTSRLSVDCLPS*SHKVSL
Trigger: CAGAGACACCTTATGACTCAAACTGGGCAAACAATC...TACTGAGAGTCTACTGGTTTTTAACTTGTTCCTCTGTCTACTGTGTGTTTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CAA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCTCCTTTTCTTCGGATTaGCCTCATTTATCCGTGGCA +
Preference number: 3 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPSFSSD*PHLSVA
Trigger: TGCCACGGATAAATGAGGCAAATCCGAAGAAAAGGA...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 72 bp CCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTaGGTGGCTTCATTTAATTTCTACACTCAGAAATGC +
Preference number: 3 (lower is better)
Translates to: PLGYLQWEIKGL*VASFNFYTQKC
Trigger: GCATTTCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 72 bp TTTTCATGTTCTCCTCCTGATAATACTGTAGGCACTTaGATCCTTTGGGGTATCTTCAGTGGGAAATCAAAG +
Preference number: 3 (lower is better)
Translates to: FSCSPPDNTVGT*ILWGIFSGKSK
Trigger: CTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTACAGTATTATCAGGAGGAGAACATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR GCA 72 bp TGCTCCTATGAACTTGTACCTTGTGTATCTAACCTTTaGTCTGTCTCATGCTCAACAATCCAGCAGTATTCT +
Preference number: 3 (lower is better)
Translates to: CSYELVPCVSNL*SVSCSTIQQYS
Trigger: AGAATACTGCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 72 bp GATTTTCCTTTTCTTCGGATTTGCCTCATTTATCCGTaGCATGAATCTGTCGCCCTCCAGAAGTATTTAGAT +
Preference number: 3 (lower is better)
Translates to: DFPFLRICLIYP*HESVALQKYLD
Trigger: ATCTAAATACTTCTGGAGGGCGACAGATTCATGCCACGGATAAATGAGGCAAATCCGAAGAAAAGGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR-3UTR CAA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCACATTGGAACTTTGGTaGGATCAAGTGTTGTTTGGA +
Preference number: 3 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPTLELW*DQVLFG
Trigger: TCCAAACAACACTTGATCCAACCAAAGTTCCAATGT...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CCA 72 bp CAAACTTTCTTCTTTGTCTGCTTGGAGCCTCTAACCTaGAGGCTCAAAATTCAAACAACACTCTACAGAAAA +
Preference number: 3 (lower is better)
Translates to: QTFFFVCLEPLT*RLKIQTTLYRK
Trigger: TTTTCTGTAGAGTGTTGTTTGAATTTTGAGCCTCCAGGTTAGAGGCTCCAAGCAGACAAAGAAGAAAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 72 bp ATACATAGTCATCCAAATTCTGTATGGATGAATTACTaGAAGCGGAATTTGGTCTACCTGCTTAACAAGAAG +
Preference number: 3 (lower is better)
Translates to: IHSHPNSVWMNY*KRNLVYLLNKK
Trigger: CTTCTTGTTAAGCAGGTAGACCAAATTCCGCTTTCAGTAATTCATCCATACAGAATTTGGATGACTATGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR TCA 72 bp AAACAATTTGGGCAGTACAATAAATGCAAAACGTGCTaGGACTCGTACTGTGTTTGTCTACAGTTTTTATGT +
Preference number: 3 (lower is better)
Translates to: KQFGQYNKCKTC*DSYCVCLQFLC
Trigger: ACATAAAAACTGTAGACAAACACAGTACGAGTCTCAGCACGTTTTGCATTTATTGTACTGCCCAAATTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGCCTCCAGACCAGCCGTaGTGGCGGCTTGGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQPPDQP*WRLGRD
Trigger: ATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGG...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGAAGGGGACCGGCGGTTaGCCCTCCGAGCGCTCAACG +
Preference number: 4 (lower is better)
Translates to: SSLTGCSIGSGQGKASTLKGTGG*PSERST
Trigger: CGTTGAGCGCTCGGAGGGCCAACCGCCGGTCCCCTT...CAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAGCGACGAGAGGCCGCTaGGCGTACCCTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPATRGR*AYPQQP
Trigger: GGGCTGCTGAGGGTACGCGCAGCGGCCTCTCGTCGC...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAACAGCCACCCGCCGCTaGTGCGGCACCGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPTATRR*CGTGSL
Trigger: CAGAGACCCGGTGCCGCAGCAGCGGCGGGTGGCTGT...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGCTGGGGCCTCCAATCTaGACTGCAGGAGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQLGPPI*TAGVRP
Trigger: TGGCCTGACTCCTGCAGTGCAGATTGGAGGCCCCAG...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCATGCCCAGTGGTTCCATaGGTGCCGCCGGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPCPVVP*VPPVAA
Trigger: GGCGGCAACCGGCGGCACCCATGGAACCACTGGGCA...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TGTTGCATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGACACTCATGCGAGCAGGCGCACTaGCTGGCGAGGCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: CCIRFQSDKPQLSWVRHSCEQAH*LARHVQ
Trigger: CTGCACGTGCCTCGCCAGGCAGTGCGCCTGCTCGCA...TGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGAGCCTGACGTCTGGGTaGCCTTTTCTCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLTGCSIGSGQGKASTLSLTSG*PFLCCG
Trigger: CCCACAGCAGAGAAAAGGGCACCCAGACGTCAGGCT...CAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGGATGGAAGCCAATCTTaGCCAGGGAGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSLTGCSIGSGQGKASTLDGSQS*PGRPAG
Trigger: TCCTGCTGGCCTCCCTGGCCAAGATTGGCTTCCATC...CAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGACTTCTCCTTGCTGGTaGAGGTGGAGAAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQTSPCW*RWRRGG
Trigger: TCCACCCCTTCTCCACCTCCACCAGCAAGGAGAAGT...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCACTCTGGGCTGCAAATTaGGCACGGTGGTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPLWAAN*ARWSRH
Trigger: ATGCCGGGACCACCGTGCTCAATTTGCAGCCCAGAG...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GTAGGCACTTGCATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAGACGGGCCCCGCCACCTaGAGGAGCAGCAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: VGTCILWGIFSGKSKDCETGPAT*RSSSNS
Trigger: GCTGTTGCTGCTGCTCCTGCAGGTGGCGGGGCCCGT...CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGGCGGCTTGGGCGGGATaGCTTCAGTCAAACTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSLTGCSIGSGQGKASTLAAWAG*LQSNCL
Trigger: AAGACAGTTTGACTGAAGGCATCCCGCCCAAGCCGC...CAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGCTCTCTGAGCCAGACTaGTCTTTAGAGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQLSEPD*SLERRG
Trigger: GCCCCTTCTCTCTAAAGACCAGTCTGGCTCAGAGAG...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCGCCTGGCGAGGCACGTaGAGGGCGACGAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSAWRGT*RATRGR
Trigger: GCGGCCTCTCGTCGCCCTGCACGTGCCTCGCCAGGC...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGCCACCCGCCGCTGCTaGGGCACCGGGTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDATRRC*GTGSLQ
Trigger: TTGCAGAGACCCGGTGCCGCAGCAGCGGCGGGTGGC...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCCCAAACACACAGTAGACAGAGGAACAAGTTAAAAACCAGTAGACTCTCAGTACTCCGCCCTGCCCCGTaGAGGGCAGGGCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: PQTHSRQRNKLKTSRLSVLRPAP*RAGQRQ
Trigger: CTGTCGCTGCCCTGCCCTGCACGGGGCAGGGCGGAG...TACTGAGAGTCTACTGGTTTTTAACTTGTTCCTCTGTCTACTGTGTGTTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGAGTAAGCCTGACGTCTaGGTGCCCTTTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSLTGCSIGSGQGKASTLSKPDV*VPFSLL
Trigger: CAGCAGAGAAAAGGGCACCCAGACGTCAGGCTTACT...CAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCCCAGGTGCTGCCCTGTaGCCCTACTTGCCACATGGA +
Preference number: 4 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFPGAAL*PYLPHG
Trigger: TCCATGTGGCAAGTAGGGCCACAGGGCAGCACCTGG...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGCGGCACCGGGTCTCTaGAACCAGAGGGCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: HGWNFIKSCSQICQHSKLAAPGL*NQRARS
Trigger: GGACCTAGCCCTCTGGTTGCAGAGACCCGGTGCCGC...CAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGCAGTGGTTCCATGGGTaGCGCCGGTTGCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HGWNFIKSCSQICQHSKLQWFHG*RRLPPR
Trigger: CCTTGGCGGCAACCGGCGGCACCCATGGAACCACTG...CAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTTGGAACTGGTGCCCATaGCCCTCGGCGCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSWNWCP*PSARSA
Trigger: TGCTGAACGCGCCGAGGGCCATGGGCACCAGTTCCA...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGCCAAAGAGCAGGTTCTaGAGCAAAGTGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SSLTGCSIGSGQGKASTLPKSRF*SKVMSL
Trigger: CAGCGACATCACTTTGCTCCAGAACCTGCTCTTTGG...CAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCCCAAACACACAGTAGACAGAGGAACAAGTTAAAAACCAGTAGACTCTCAGTACCAGACCAGCCGTGGTaGCGGCTTGGGCGGGATGCC +
Preference number: 4 (lower is better)
Translates to: PQTHSRQRNKLKTSRLSVPDQPW*RLGRDA
Trigger: GGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGG...TACTGAGAGTCTACTGGTTTTTAACTTGTTCCTCTGTCTACTGTGTGTTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAATGGGTGCCGCCGGTTaGCGCCAAGGGGACCGGCGG +
Preference number: 4 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRMGAAG*RQGDRR
Trigger: CCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCAT...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAAGGGCTAGGTCCTCGCTaGGAGCAGGCGCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQGLGPR*EQAHCL
Trigger: CAGGCAGTGCGCCTGCTCGCAGCGAGGACCTAGCCC...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGCTGCTATTGCCATCTaGAATAGAAATAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQAAIAI*NRNSPP
Trigger: AGGAGGACTATTTCTATTGCAGATGGCAATAGCAGC...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAAGCAGGCGCACTGCCTaGCGAGGCACGTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRSRRTA*RGTCRA
Trigger: CGCCCTGCACGTGCCTCGCCAGGCAGTGCGCCTGCT...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCCCTCCAGTTGCCCAGTaGTTCCATGGGTGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSPPVAQ*FHGCRR
Trigger: CCGGCGGCACCCATGGAACCACTGGGCAACTGGAGG...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCAGAAGTATTTAGATGCACAGAGAGTTTTACATGGATTCCACTGTTGCATCAGCAGCATCGGAGGCAGTaGCGCCCGCAGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PEVFRCTESFTWIPLLHQQHRRQ*RPQAPP
Trigger: TGGAGGAGCCTGCGGGCGCCACTGCCTCCGATGCTG...CTGATGCAACAGTGGAATCCATGTAAAACTCTCTGTGCATCTAAATACTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCGCCGTGGTGGCGGCTTaGGCGGGATGCCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSAVVAA*AGCLQS
Trigger: TGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGC...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TGTTGCATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGACACTCAGCCCTACTTGCCACATaGACCCTCATGGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: CCIRFQSDKPQLSWVRHSALLAT*TLMGGT
Trigger: AGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGGC...TGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp CATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGATGGGCGAGTGGGCATaGAATAGCCGGCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: HGWNFIKSCSQICQHSKLMGEWA*NSRHPA
Trigger: TGCTGGATGCCGGCTATTTCATGCCCACTCGCCCAT...CAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCACAGCTGAGATTAAGCTaGCAAAGAGCAGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPQLRLS*QRAGSG
Trigger: TCCAGAACCTGCTCTTTGGCAGCTTAATCTCAGCTG...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGTTCTACACTCAGAAATaGAGAGGCATGTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SSLTGCSIGSGQGKASTLFYTQK*RGMFQS
Trigger: TGACTGGAACATGCCTCTGCATTTCTGAGTGTAGAA...CAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCAGATTGACTTCTCCTTaGTGGTGGAGGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFRLTSP*WWRWRR
Trigger: CCTTCTCCACCTCCACCAGCAAGGAGAAGTCAATCT...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCAAGCTGGTGGATGTCTaGGCAACCTTTCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFKLVDV*ATFLSA
Trigger: TGCAGAGAGAAAGGTTGCCCAGACATCCACCAGCTT...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGCATTGGAACTTTGGTTaGATCAAGTGTTGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQHWNFG*IKCCLD
Trigger: GTCCAAACAACACTTGATCCAACCAAAGTTCCAATG...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGGGAAAAGCTTCCACGCTGGATCCACAGTCACATTaGAACTTTGGTTGGATCAAG +
Preference number: 4 (lower is better)
Translates to: SSLTGCSIGSGQGKASTLDPQSH*NFGWIK
Trigger: CTTGATCCAACCAAAGTTCCAATGTGACTGTGGATC...CAGCGTGGAAGCTTTTCCCTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp TGTTGCATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGACACTCAACTGTCTTCCCTCTCTaGGCCAGACTGGTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CCIRFQSDKPQLSWVRHSTVFPL*ARLVFR
Trigger: TCTAAAGACCAGTCTGGCTCAGAGAGGGAAGACAGT...TGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp TGTTGCATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGACACTCACATCAGGTTTCAGAGTaGCAAACCACAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CCIRFQSDKPQLSWVRHSHQVSE*QTTAVL
Trigger: CAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATG...TGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAGAAGTTGGCGATTCCTaGAAACACATCAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPEVGDS*KHINGL
Trigger: GAGACCATTGATGTGTTTGCAGGAATCGCCAACTTC...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGCTCTGCTTCCAGCTGTaGTCTTCACTTACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: HGWNFIKSCSQICQHSKLLCFQL*SSLTGC
Trigger: GCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG...CAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TGTTGCATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGACACTCAGTCAACACAGTAAGCTaGTGGATGTCTGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: CCIRFQSDKPQLSWVRHSVNTVS*WMSGQP
Trigger: AGGTTGCCCAGACATCCACCAGCTTACTGTGTTGAC...TGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCCCCGGCATCTGCGTCTaGGTCGCTGCTATTGCCATC +
Preference number: 4 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPPGICV*VAAIAI
Trigger: GATGGCAATAGCAGCGACTCAGACGCAGATGCCGGG...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCCGCCTGGCTCTGGGCTaGAAATTGAGCACGGTGGTC +
Preference number: 4 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPRLALG*KLSTVV
Trigger: GACCACCGTGCTCAATTTGCAGCCCAGAGCCAGGCG...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTTTAGAGAGAAGGGGCTaGTGTAGTAAGCCTGACGTC +
Preference number: 4 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSLERRG*CSKPDV
Trigger: GACGTCAGGCTTACTACAGCAGCCCCTTCTCTCTAA...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGAGGTGGAGAAGGGGTaGAGAACAACTGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: HGWNFIKSCSQICQHSKLEVEKG*RTTAED
Trigger: ATCCTCAGCAGTTGTTCTCCACCCCTTCTCCACCTC...CAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCGCCTCCAATCTGCACTaGAGGAGTCAGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSASNLH*RSQAIP
Trigger: AGGAATGGCCTGACTCCTGCAGTGCAGATTGGAGGC...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAACTTCATCAAAAGCTaGTCCCAAATCTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPNFIKS*SQICQH
Trigger: GTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTT...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCTCTCAGGCACTATTGTaGGCAACTTGTGATACAGAT +
Preference number: 4 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFSQALL*ATCDTD
Trigger: ATCTGTATCACAAGTTGCCCACAATAGTGCCTGAGA...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TGTTGCATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGACACTCAACACCCCAATGCCAATaGAATTCCAAAGTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: CCIRFQSDKPQLSWVRHSTPQCQ*NSKVSL
Trigger: TAGGGACACTTTGGAATTCCATTGGCATTGGGGTGT...TGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCACATCAATGGTCTCAATaGTTTTCATCTGGCAAAACG +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPHQWSQ*FSSGKT
Trigger: CGTTTTGCCAGATGAAAACCATTGAGACCATTGATG...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAACAGAGAGTTTTACATaGATTCCACTGTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPTESFT*IPLLHQ
Trigger: CTGATGCAACAGTGGAATCCATGTAAAACTCTCTGT...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCTTGGAGCCTCTAACCTaGAGGCTCAAAATTCAAACA +
Preference number: 4 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFLEPLT*RLKIQT
Trigger: TGTTTGAATTTTGAGCCTCCAGGTTAGAGGCTCCAA...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTGGCACTTGCATCCTTTaGGGTATCTTCAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSGTCIL*GIFSGK
Trigger: TTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCC...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAAGCAGGATCCAAAGGGTaGTCTCGAAGGGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQAGSKG*SRRGSA
Trigger: TGCAGATCCCCTTCGAGATCACCCTTTGGATCCTGC...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGGCAGGCTCCTCCAGTTaGCCAGTGGTTCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQAGSSS*PVVPWV
Trigger: CACCCATGGAACCACTGGGCAACTGGAGGAGCCTGC...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATCAGGACCACTGTTACTaGATCATTCAGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDQDHCY*IIQQGL
Trigger: GAGTCCCTGCTGAATGATGCAGTAACAGTGGTCCTG...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TGTTGCATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGACACTCATATCATCCCAGTCTCTaGCATCTCAATGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: CCIRFQSDKPQLSWVRHSYHPSL*HLNGMF
Trigger: AAACATGCCATTGAGATGGCAGAGACTGGGATGATA...TGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CAAATCAAATTTTGTTACAACCAACACCAAAGACCTATCAAAGATCCACAGTCAGCTTCCAGGTTCCGATaGCCTCCAGACCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: QIKFCYNQHQRPIKDPQSASRFR*PPDQPW
Trigger: CCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGC...TGACTGTGGATCTTTGATAGGTCTTTGGTGTTGGTTGTAACAAAATTTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTCATGGATTCCACTGTTaGATCAGGTTTCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSHGFHC*IRFQSD
Trigger: GTCACTCTGAAACCTGATGCAACAGTGGAATCCATG...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAGTTGTAACCAGGTGCTaGCCTGTGGCCCTACTTGCC +
Preference number: 4 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRVVTRC*PVALLA
Trigger: GGCAAGTAGGGCCACAGGGCAGCACCTGGTTACAAC...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCTGTGTATCTAACCTTTaGTCTGTCTCATGCTCAACA +
Preference number: 4 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFCVSNL*SVSCST
Trigger: TGTTGAGCATGAGACAGAGCAAAGGTTAGATACACA...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCATCAATGGTTTTCATCTaGCAAAACGACTTGAACAAG +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPSMVFI*QNDLNK
Trigger: CTTGTTCAAGTCGTTTTGCCAGATGAAAACCATTGA...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TGTTGCATCAGGTTTCAGAGTGACAAACCACAGCTGTCCTGGGTCAGACACTCAAAGAAACTCCACCAGTaGTCGAATAGTTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: CCIRFQSDKPQLSWVRHSKKLHQ*SNSYSQ
Trigger: CTGGGAATAACTATTCGACCACTGGTGGAGTTTCTT...TGAGTGTCTGACCCAGGACAGCTGTGGTTTGTCACTCTGAAACCTGATGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGAACACAGTAAGCTGGTaGATGTCTGGGCAACCTTTC +
Preference number: 4 (lower is better)
Translates to: HGWNFIKSCSQICQHSKLNTVSW*MSGQPF
Trigger: GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTT...CAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAGTCACATTGGAACTTTaGTTGGATCAAGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPVTLEL*LDQVLF
Trigger: AAACAACACTTGATCCAACCAAAGTTCCAATGTGAC...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp CATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGTCTGGCAAAACGACTTaGACAAGTTGTACAGGACCA +
Preference number: 4 (lower is better)
Translates to: HGWNFIKSCSQICQHSKLSGKTT*TSCTGP
Trigger: TGGTCCTGTACAACTTGTTCAAGTCGTTTTGCCAGA...CAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCCATTTATCCGTGGCATaGATCTGTCGCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSHLSVA*ICRPPE
Trigger: TTCTGGAGGGCGACAGATTCATGCCACGGATAAATG...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAGGAATTTGGTCTACCTaGTTAACAAGAAGCAATATA +
Preference number: 4 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPGIWST*LTRSNI
Trigger: TATATTGCTTCTTGTTAAGCAGGTAGACCAAATTCC...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTCAGGAAAACAAACAGTaGCTCGATCACTCGGATATT +
Preference number: 4 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSQENKQ*LDHSDI
Trigger: AATATCCGAGTGATCGAGCCACTGTTTGTTTTCCTG...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCATCGGGAGGTTGAAGTaGAAGCCCTGTGTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSIGRLK*KPCVLD
Trigger: ATCGAGAACACAGGGCTTCCACTTCAACCTCCCGAT...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCAAACCACAGCTGTCCTaGGTCAGACACTCAGATCTG +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSKPQLS*VRHSDL
Trigger: CAGATCTGAGTGTCTGACCCAGGACAGCTGTGGTTT...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCTGCCTCATTTATCCGTaGCATGAATCTGTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSCLIYP*HESVAL
Trigger: GAGGGCGACAGATTCATGCCACGGATAAATGAGGCA...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CAA 72 bp CAGTCACATTGGAACTTTGGTTGGATCAAGTGTTGTTaGGACGAACGAAAGCCTTTACAAAGGGCTACGGCT +
Preference number: 4 (lower is better)
Translates to: QSHWNFGWIKCC*DERKPLQRATA
Trigger: AGCCGTAGCCCTTTGTAAAGGCTTTCGTTCGTCCAAACAACACTTGATCCAACCAAAGTTCCAATGTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGGTCGCTGAGGCCGAATaGTTCGATCTGGCAGATACC +
Preference number: 4 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQVAEAE*FDLADT
Trigger: GGTATCTGCCAGATCGAAGCATTCGGCCTCAGCGAC...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCCCAAACACACAGTAGACAGAGGAACAAGTTAAAAACCAGTAGACTCTCAGTACTAACGCAAAACAGATaGCACCTCGAAGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PQTHSRQRNKLKTSRLSVLTQNR*HLEVLH
Trigger: ATGGAGGACTTCGAGGTGCCATCTGTTTTGCGTTAG...TACTGAGAGTCTACTGGTTTTTAACTTGTTCCTCTGTCTACTGTGTGTTTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAGCCATCCTTCACCCCTaGGAAAGAAAGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRAILHP*ERKLFS
Trigger: CGAGAACAGCTTTCTTTCCCAGGGGTGAAGGATGGC...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATTCTTATTGGACCTCTTaGCATCAAGAAACTCCACCA +
Preference number: 4 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDSYWTS*HQETPP
Trigger: TGGTGGAGTTTCTTGATGTCAAGAGGTCCAATAAGA...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGGAATTGTGCTCCTATaGACTTGTACCTTGTGTATC +
Preference number: 4 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDGIVLL*TCTLCI
Trigger: GATACACAAGGTACAAGTTCATAGGAGCACAATTCC...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTCTTATTCATAGTCATTaGACAAGCAGTGATTGCCAT +
Preference number: 4 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSLIHSH*TSSDCH
Trigger: ATGGCAATCACTGCTTGTGCAATGACTATGAATAAG...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CAAATCAAATTTTGTTACAACCAACACCAAAGACCTATCAAAGATCCACAGTCATCTTCACTTACCGGCTaGTCCATCGGGTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: QIKFCYNQHQRPIKDPQSSSLTG*SIGSGQ
Trigger: CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGA...TGACTGTGGATCTTTGATAGGTCTTTGGTGTTGGTTGTAACAAAATTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATCTTTGCTCTGTCTCATaGTCAACAATCCAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDLCSVS*STIQQY
Trigger: ATACTGCTGGATTGTTGAGCATGAGACAGAGCAAAG...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGTTGACTTCTCCTTGCTaGTGGAGGTGGAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQLTSPC*WRWRRG
Trigger: ACCCCTTCTCCACCTCCACCAGCAAGGAGAAGTCAA...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCTGTAGAGCTGCTCATTaGCGTGAATGTTCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSCRAAH*RECSQR
Trigger: TCTTTGAGAACATTCACGTCAATGAGCAGCTCTACA...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp GAGGTAACAAATTACAGACTAGTGCAAAACAGTAGGACTCCCACATTCTCCAAAATTGTTTGCCCAGTTTaGGTCATAAGGTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EVTNYRLVQNSRTPTFSKIVCPV*VIRCLC
Trigger: GCAGAGACACCTTATGACTCAAACTGGGCAAACAAT...TTTGGAGAATGTGGGAGTCCTACTGTTTTGCACTAGTCTGTAATTTGTTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATACATCAGTCTTCATTaGAGGGGGAGACTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQYISLH*RGRLLI
Trigger: GATGAGAAGTCTCCCCCTGCAATGAAGACTGATGTA...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAGTCATAAGGTGTCTCTaGTTCCAGCTGTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRVIRCL*FQLCSS
Trigger: TGAAGAGCACAGCTGGAAGCAGAGACACCTTATGAC...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAACCGAATGCTTCGATCTaGCAGATACCAAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQPNASI*QIPNKD
Trigger: GTCTTTGTTTGGTATCTGCCAGATCGAAGCATTCGG...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCCCACAACAAAGAAGTTaGCGATTCCTGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSPQQRS*RFLQTH
Trigger: ATGTGTTTGCAGGAATCGCCAACTTCTTTGTTGTGG...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGACCACATGGACCCTCATaGGTGGAACTTCATCAAAAG +
Preference number: 4 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRPHGPS*VELHQK
Trigger: CTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGG...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAATGATGCCTGAGAGGTaGAACATTTCAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRMMPER*NISAVM
Trigger: CATCACAGCTGAAATGTTTCACCTCTCAGGCATCAT...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGAAATCAAAGGACTGTaGGTGGCTTCATTTAATTTC +
Preference number: 4 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDEIKGL*VASFNF
Trigger: GAAATTAAATGAAGCCACTCACAGTCCTTTGATTTC...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GAGGTAACAAATTACAGACTAGTGCAAAACAGTAGGACTCCCACATTCTCCAAACCTTTTCTTCGGATTTaGCTCATTTATCCGTGGCAT +
Preference number: 4 (lower is better)
Translates to: EVTNYRLVQNSRTPTFSKPFLRI*LIYPWH
Trigger: ATGCCACGGATAAATGAGGCAAATCCGAAGAAAAGG...TTTGGAGAATGTGGGAGTCCTACTGTTTTGCACTAGTCTGTAATTTGTTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCAATACTGTAGGCACTTaGATCCTTTGGGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPNTVGT*ILWGIF
Trigger: GAAGATACCCCAAAGGATGCAAGTGCCTACAGTATT...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATTCTCTGCCATCTCAATaGCATGTTTTATTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDSLPSQ*HVLFQA
Trigger: AGCTTGAAATAAAACATGCCATTGAGATGGCAGAGA...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCGGATCAAGTGTTGTTTaGACGAACGAAAGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPGSSVV*TNESLY
Trigger: GTAAAGGCTTTCGTTCGTCCAAACAACACTTGATCC...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp CAAATCAAATTTTGTTACAACCAACACCAAAGACCTATCAAAGATCCACAGTCACTGTGCTACTTTCCCTaGATCAAGGAATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QIKFCYNQHQRPIKDPQSLCYFP*IKELCS
Trigger: GGAGCACAATTCCTTGATTCAGGGAAAGTAGCACAG...TGACTGTGGATCTTTGATAGGTCTTTGGTGTTGGTTGTAACAAAATTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp GAGGTAACAAATTACAGACTAGTGCAAAACAGTAGGACTCCCACATTCTCCAAAGTATGGATGAATTACTaGAAGCGGAATTTGGTCTAC +
Preference number: 4 (lower is better)
Translates to: EVTNYRLVQNSRTPTFSKVWMNY*KRNLVY
Trigger: GTAGACCAAATTCCGCTTTCAGTAATTCATCCATAC...TTTGGAGAATGTGGGAGTCCTACTGTTTTGCACTAGTCTGTAATTTGTTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAAAATGCAAAACGTGCTaGGACTCGTACTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRKCKTC*DSYCVC
Trigger: ACAAACACAGTACGAGTCTCAGCACGTTTTGCATTT...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCCATACCAGAAAATCGTaGCAATGTTCTCAAAGAATG +
Preference number: 4 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSHTRKS*QCSQRM
Trigger: CATTCTTTGAGAACATTGGCACGATTTTCTGGTATG...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GAGGTAACAAATTACAGACTAGTGCAAAACAGTAGGACTCCCACATTCTCCAAAGAATCGAGTAGTAAATaGCGCTATAAAGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: EVTNYRLVQNSRTPTFSKESSSK*RYKAQE
Trigger: TTCTTGGGCTTTATAGCGGCATTTACTACTCGATTC...TTTGGAGAATGTGGGAGTCCTACTGTTTTGCACTAGTCTGTAATTTGTTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CAAATCAAATTTTGTTACAACCAACACCAAAGACCTATCAAAGATCCACAGTCAATGGACCCTCATGGGTaGAACTTCATCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QIKFCYNQHQRPIKDPQSMDPHG*NFIKSC
Trigger: GCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCAT...TGACTGTGGATCTTTGATAGGTCTTTGGTGTTGGTTGTAACAAAATTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAAACTGAAAGCGGAATTTaGTCTACCTGCTTAACAAGA +
Preference number: 4 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQTESGI*STCLTR
Trigger: TCTTGTTAAGCAGGTAGACCAAATTCCGCTTTCAGT...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CAA 72 bp ACTTTCCCTGAATCAAGGAATTGTGCTCCTATGAACTaGTACCTTGTGTATCTAACCTTTGCTCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: TFPESRNCAPMN*YLVYLTFALSH
Trigger: ATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGGAGCACAATTCCTTGATTCAGGGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp GAGGTAACAAATTACAGACTAGTGCAAAACAGTAGGACTCCCACATTCTCCAAACCAGAAGTATTTAGATaGACAGAGAGTTTTACATGG +
Preference number: 4 (lower is better)
Translates to: EVTNYRLVQNSRTPTFSKPEVFR*TESFTW
Trigger: CCATGTAAAACTCTCTGTGCATCTAAATACTTCTGG...TTTGGAGAATGTGGGAGTCCTACTGTTTTGCACTAGTCTGTAATTTGTTACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR GCA 90 bp CAAATCAAATTTTGTTACAACCAACACCAAAGACCTATCAAAGATCCACAGTCATCAGGCCATTCCTTCTaGATGACGTTCCGATTGTTT +
Preference number: 4 (lower is better)
Translates to: QIKFCYNQHQRPIKDPQSSGHSF*MTFRLF
Trigger: AAACAATCGGAACGTCATGCAGAAGGAATGGCCTGA...TGACTGTGGATCTTTGATAGGTCTTTGGTGTTGGTTGTAACAAAATTTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
3UTR CAA 72 bp AGAATATTGTGTCTACAAACTTTCTTCTTTGTCTGCTaGGAGCCTCTAACCTGGAGGCTCAAAATTCAAACA +
Preference number: 4 (lower is better)
Translates to: RILCLQTFFFVC*EPLTWRLKIQT
Trigger: TGTTTGAATTTTGAGCCTCCAGGTTAGAGGCTCCAAGCAGACAAAGAAGAAAGTTTGTAGACACAATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp CAAATCAAATTTTGTTACAACCAACACCAAAGACCTATCAAAGATCCACAGTCAAACCTATTAATGACCTaGGTCAGGACAAAAACACCC +
Preference number: 4 (lower is better)
Translates to: QIKFCYNQHQRPIKDPQSNLLMT*VRTKTP
Trigger: GGGTGTTTTTGTCCTGACTCAGGTCATTAATAGGTT...TGACTGTGGATCTTTGATAGGTCTTTGGTGTTGGTTGTAACAAAATTTGATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR TCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGAAGCTGAGCAAAAGCTaGAAGAAATCTCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQKLSKS*KKSLHR
Trigger: TCTGTGAAGAGATTTCTTTCAGCTTTTGCTCAGCTT...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GAGGTAACAAATTACAGACTAGTGCAAAACAGTAGGACTCCCACATTCTCCAAAATCACTCGGATATTATaGGTGAATCGAGTAGTAAAT +
Preference number: 4 (lower is better)
Translates to: EVTNYRLVQNSRTPTFSKITRIL*VNRVVN
Trigger: ATTTACTACTCGATTCACCCATAATATCCGAGTGAT...TTTGGAGAATGTGGGAGTCCTACTGTTTTGCACTAGTCTGTAATTTGTTACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCAAAGGACTGTGAGTaGCTTCATTTAATTTCTACA +
Preference number: 4 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQSKDCE*LHLIST
Trigger: TGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGA...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CCA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGATACTTGACTTTGGTTaGTTTTCCCGAATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQILDFG*FSRIKS
Trigger: GCTTTTGATTCGGGAAAACCAACCAAAGTCAAGTAT...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp CAACGCATCGCGCCCGGGCTGCTCAGCCCGCTCCGCCCTGCCCCGTaGAGGGCAGGGCAGCGACAGCCACCCGCCGCTGCTGCGGCACCG +
Preference number: 5 (lower is better)
Translates to: QRIAPGLLSPLRPAP*RAGQRQPPAAAAAP
Trigger: CGGTGCCGCAGCAGCGGCGGGTGGCTGTCGCTGCCCTGCCCTGCACGGGGCAGGGCGGAGCGGGCTGAGCAGCCCGGGCGCGATGCGTTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp AGGCGCACTGCCTGGCGAGGCACGTGCAGGGCGACGAGAGGCCGCTaGGCGTACCCTCAGCAGCCCTCAGCCGCCCTCCGCCGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: RRTAWRGTCRATRGR*AYPQQPSAALRRRP
Trigger: CGGCCGGCGGCGGAGGGCGGCTGAGGGCTGCTGAGGGTACGCGCAGCGGCCTCTCGTCGCCCTGCACGTGCCTCGCCAGGCAGTGCGCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp GAGCGCTCAACGCATCGCGCCCGGGCTGCTCAGCCCGCTCCGCCCTaGCCCGTGCAGGGCAGGGCAGCGACAGCCACCCGCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ERSTHRARAAQPAPP*PVQGRAATATRRCC
Trigger: GCAGCAGCGGCGGGTGGCTGTCGCTGCCCTGCCCTGCACGGGGCAGGGCGGAGCGGGCTGAGCAGCCCGGGCGCGATGCGTTGAGCGCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp GTGGTTCCATGGGTGCCGCCGGTTGCCGCCAAGGGGACCGGCGGTTaGCCCTCCGAGCGCTCAACGCATCGCGCCCGGGCTGCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: VVPWVPPVAAKGTGG*PSERSTHRARAAQP
Trigger: GGGCTGAGCAGCCCGGGCGCGATGCGTTGAGCGCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp CAGTGGCGCCCGCAGGCTCCTCCAGTTGCCCAGTGGTTCCATGGGTaGCGCCGGTTGCCGCCAAGGGGACCGGCGGTTGGCCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: QWRPQAPPVAQWFHG*RRLPPRGPAVGPPS
Trigger: GCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGGGCGCCACTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp GAGGCAGTGGCGCCCGCAGGCTCCTCCAGTTGCCCAGTGGTTCCATaGGTGCCGCCGGTTGCCGCCAAGGGGACCGGCGGTTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: EAVAPAGSSSCPVVP*VPPVAAKGTGGWPS
Trigger: GGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGGGCGCCACTGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp GCAGGGCAGCGACAGCCACCCGCCGCTGCTGCGGCACCGGGTCTCTaGAACCAGAGGGCTAGGTCCTCGCTGCGAGCAGGCGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: AGQRQPPAAAAAPGL*NQRARSSLRAGALP
Trigger: AGGCAGTGCGCCTGCTCGCAGCGAGGACCTAGCCCTCTGGTTGCAGAGACCCGGTGCCGCAGCAGCGGCGGGTGGCTGTCGCTGCCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp CTGCTGCGGCACCGGGTCTCTGCAACCAGAGGGCTAGGTCCTCGCTaGGAGCAGGCGCACTGCCTGGCGAGGCACGTGCAGGGCGACGAG +
Preference number: 5 (lower is better)
Translates to: LLRHRVSATRGLGPR*EQAHCLARHVQGDE
Trigger: CTCGTCGCCCTGCACGTGCCTCGCCAGGCAGTGCGCCTGCTCGCAGCGAGGACCTAGCCCTCTGGTTGCAGAGACCCGGTGCCGCAGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp CGCAGGCTCCTCCAGTTGCCCAGTGGTTCCATGGGTGCCGCCGGTTaGCGCCAAGGGGACCGGCGGTTGGCCCTCCGAGCGCTCAACGCA +
Preference number: 5 (lower is better)
Translates to: RRLLQLPSGSMGAAG*RQGDRRLALRALNA
Trigger: TGCGTTGAGCGCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp CAGCATCGGAGGCAGTGGCGCCCGCAGGCTCCTCCAGTTGCCCAGTaGTTCCATGGGTGCCGCCGGTTGCCGCCAAGGGGACCGGCGGTT +
Preference number: 5 (lower is better)
Translates to: QHRRQWRPQAPPVAQ*FHGCRRLPPRGPAV
Trigger: AACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGGGCGCCACTGCCTCCGATGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp GTCTCTGCAACCAGAGGGCTAGGTCCTCGCTGCGAGCAGGCGCACTaGCTGGCGAGGCACGTGCAGGGCGACGAGAGGCCGCTGCGCGTA +
Preference number: 5 (lower is better)
Translates to: VSATRGLGPRCEQAH*LARHVQGDERPLRV
Trigger: TACGCGCAGCGGCCTCTCGTCGCCCTGCACGTGCCTCGCCAGGCAGTGCGCCTGCTCGCAGCGAGGACCTAGCCCTCTGGTTGCAGAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp GCAGCAACAGCATCGGAGGCAGTGGCGCCCGCAGGCTCCTCCAGTTaGCCAGTGGTTCCATGGGTGCCGCCGGTTGCCGCCAAGGGGACC +
Preference number: 5 (lower is better)
Translates to: AATASEAVAPAGSSS*PVVPWVPPVAAKGT
Trigger: GGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGGGCGCCACTGCCTCCGATGCTGTTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp AGGCTTCTCACTCCCAAATCGGGCTTTCCGGCTTCCAGGTTCCGATaGCCTCCAGACCAGCCGTGGTGGCGGCTTGGGCGGGATGCCTTC +
Preference number: 5 (lower is better)
Translates to: RLLTPKSGFPASRFR*PPDQPWWRLGRDAF
Trigger: GAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGCCGGAAAGCCCGATTTGGGAGTGAGAAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp GGCTTCCAGGTTCCGATGCCCTCCAGACCAGCCGTGGTGGCGGCTTaGGCGGGATGCCTTCAGTCAAACTGTCTTCCCTCTCTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GFQVPMPSRPAVVAA*AGCLQSNCLPSLSQ
Trigger: CTGGCTCAGAGAGGGAAGACAGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp GGCTTTCCGGCTTCCAGGTTCCGATGCCCTCCAGACCAGCCGTGGTaGCGGCTTGGGCGGGATGCCTTCAGTCAAACTGTCTTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: GFPASRFRCPPDQPW*RLGRDAFSQTVFPL
Trigger: GAGAGGGAAGACAGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGCCGGAAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp TCGGGCTTTCCGGCTTCCAGGTTCCGATGCCCTCCAGACCAGCCGTaGTGGCGGCTTGGGCGGGATGCCTTCAGTCAAACTGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SGFPASRFRCPPDQP*WRLGRDAFSQTVFP
Trigger: AGGGAAGACAGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGCCGGAAAGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp GTTCCGATGCCCTCCAGACCAGCCGTGGTGGCGGCTTGGGCGGGATaGCTTCAGTCAAACTGTCTTCCCTCTCTGAGCCAGACTGGTCTT +
Preference number: 5 (lower is better)
Translates to: VPMPSRPAVVAAWAG*LQSNCLPSLSQTGL
Trigger: AAGACCAGTCTGGCTCAGAGAGGGAAGACAGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGAGATGGAAGCCAATCTaGGCCAGGGAGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQRWKPI*AREASR
Trigger: CCTGCTGGCCTCCCTGGCCAAGATTGGCTTCCATCT...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS TCA 90 bp TGGAGAACTGTTCTGGCAAGAAGCGCCTGGCTCTGGGCTGCAAATTaGGCACGGTGGTCCCGGCATCTGCGTCTGAGTCGCTGCTATTGC +
Preference number: 5 (lower is better)
Translates to: WRTVLARSAWLWAAN*ARWSRHLRLSRCYC
Trigger: GCAATAGCAGCGACTCAGACGCAGATGCCGGGACCACCGTGCTCAATTTGCAGCCCAGAGCCAGGCGCTTCTTGCCAGAACAGTTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp GATTTCTTGGAGAACTGTTCTGGCAAGAAGCGCCTGGCTCTGGGCTaGAAATTGAGCACGGTGGTCCCGGCATCTGCGTCTGAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: DFLENCSGKKRLALG*KLSTVVPASASESL
Trigger: CAGCGACTCAGACGCAGATGCCGGGACCACCGTGCTCAATTTGCAGCCCAGAGCCAGGCGCTTCTTGCCAGAACAGTTCTCCAAGAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCCTACTTGCCACATGGACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCACGCAGGCTCCTCCAGTaGCCCAGTGGTTCCATGGGT +
Preference number: 5 (lower is better)
Translates to: PYLPHGPSWVELHQKLLPRRLLQ*PSGSMG
Trigger: ACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCG...TGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTCCATGTGGCAAGTAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp GGCGGGATGCCTTCAGTCAAACTGTCTTCCCTCTCTGAGCCAGACTaGTCTTTAGAGAGAAGGGGCTGCTGTAGTAAGCCTGACGTCTGG +
Preference number: 5 (lower is better)
Translates to: GGMPSVKLSSLSEPD*SLERRGCCSKPDVW
Trigger: CCAGACGTCAGGCTTACTACAGCAGCCCCTTCTCTCTAAAGACCAGTCTGGCTCAGAGAGGGAAGACAGTTTGACTGAAGGCATCCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCCATGGGTGCCGCCGGTaGCCGCCAAGGGGACCGGCG +
Preference number: 5 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPHGCRR*PPRGPA
Trigger: CGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATG...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGTTCTTCTTTGTCTGCTaGGAGCCTCTAACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQFFFVC*EPLTWR
Trigger: CCTCCAGGTTAGAGGCTCCAAGCAGACAAAGAAGAA...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCCCAAACACACAGTAGACAGAGGAACAAGTTAAAAACCAGTAGACTCTCAGTACAAGGGGACCGGCGGTaGGCCCTCCGAGCGCTCAAC +
Preference number: 5 (lower is better)
Translates to: PQTHSRQRNKLKTSRLSVQGDRR*ALRALN
Trigger: GTTGAGCGCTCGGAGGGCCAACCGCCGGTCCCCTTG...TACTGAGAGTCTACTGGTTTTTAACTTGTTCCTCTGTCTACTGTGTGTTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp GACCCTCATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTGCTCTGGGCTGCAAATaGAGCACGGTGGTCCCGGCA +
Preference number: 5 (lower is better)
Translates to: DPHGWNFIKSCSQICQHSALGCK*STVVPA
Trigger: TGCCGGGACCACCGTGCTCAATTTGCAGCCCAGAGC...ACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATGAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATAGCCGTGGTGGCGGCTaGGGCGGGATGCCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDSRGGG*GGMPSV
Trigger: GACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCT...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCCAGAATCTCCTTGGCTaGTCTCTCACTTGTGTCGGC +
Preference number: 5 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFQNLLG*SLTCVG
Trigger: GCCGACACAAGTGAGAGACAAGCCAAGGAGATTCTG...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp GCCAAAGAGCAGGTTCTGGAGCAAAGTGATGTCGCTGAGGCCGAATaGTTCGATCTGGCAGATACCAAACAAAGACACCCCAATGCCAAT +
Preference number: 5 (lower is better)
Translates to: AKEQVLEQSDVAEAE*FDLADTKQRHPNAN
Trigger: ATTGGCATTGGGGTGTCTTTGTTTGGTATCTGCCAGATCGAAGCATTCGGCCTCAGCGACATCACTTTGCTCCAGAACCTGCTCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CTCTGCTTCCAGCTGTGCTCTTCACTTACCGGCTGCTCCATCGGGTCAGGACAGTTCTTCACTGACAGCTaGTTGTTTCTTATTGGACCT +
Preference number: 5 (lower is better)
Translates to: LCFQLCSSLTGCSIGSGQFFTDS*LFLIGP
Trigger: AGGTCCAATAAGAAACAACAAGCTGTCAGTGAAGAA...CTGTCCTGACCCGATGGAGCAGCCGGTAAGTGAAGAGCACAGCTGGAAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp CAGTGGCTCGATCACTCGGATATTATGGGTGAATCGAGTAGTAAATaGCGCTATAAAGCCCAAGAAGATGCCAATCAGCACCCCACCGAT +
Preference number: 5 (lower is better)
Translates to: QWLDHSDIMGESSSK*RYKAQEDANQHPTD
Trigger: ATCGGTGGGGTGCTGATTGGCATCTTCTTGGGCTTTATAGCGGCATTTACTACTCGATTCACCCATAATATCCGAGTGATCGAGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp AGGTTCTGGAGCAAAGTGATGTCGCTGAGGCCGAATGCTTCGATCTaGCAGATACCAAACAAAGACACCCCAATGCCAATGGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: RFWSKVMSLRPNASI*QIPNKDTPMPMEFQ
Trigger: TTGGAATTCCATTGGCATTGGGGTGTCTTTGTTTGGTATCTGCCAGATCGAAGCATTCGGCCTCAGCGACATCACTTTGCTCCAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 90 bp AGCAAGGTTGGCTCTCCCATCTTTAGGACTTACAGCCAATTAATCTaGCAGCCTTTGGATGTGTGCTTAGGGCAGATTCATGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: SKVGSPIFRTYSQLI*QPLDVCLGQIHGLQ
Trigger: CTGGAGTCCATGAATCTGCCCTAAGCACACATCCAAAGGCTGCCAGATTAATTGGCTGTAAGTCCTAAAGATGGGAGAGCCAACCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469286.1
CDS-3UTR CAA 90 bp GTAGGCACTTGCATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAGAGCTCTCAGGCACTATaGTGGGCAACTTGTGATACA +
Preference number: 5 (lower is better)
Translates to: VGTCILWGIFSGKSKDCESSQAL*WATCDT
Trigger: TGTATCACAAGTTGCCCACAATAGTGCCTGAGAGCT...CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp GTAGGCACTTGCATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAGCCCACAACAAAGAAGTaGGCGATTCCTGCAAACACA +
Preference number: 5 (lower is better)
Translates to: VGTCILWGIFSGKSKDCEPTTKK*AIPANT
Trigger: TGTGTTTGCAGGAATCGCCAACTTCTTTGTTGTGGG...CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp GCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATGTCTGGGCAACCTTTCTTCACTGACAGCTTGTaGTTTCTTATTGGACCTCTT +
Preference number: 5 (lower is better)
Translates to: AAPKSVNTVSWWMSGQPFFTDSL*FLIGPL
Trigger: AAGAGGTCCAATAAGAAACAACAAGCTGTCAGTGAA...GAAAGGTTGCCCAGACATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp GTAGGCACTTGCATCCTTTGGGGTATCTTCAGTGGGAAATCAAAGGACTGTGAGTCCTTTTCTTCGGATTaGCCTCATTTATCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: VGTCILWGIFSGKSKDCESFSSD*PHLSVA
Trigger: TGCCACGGATAAATGAGGCAAATCCGAAGAAAAGGA...CTCACAGTCCTTTGATTTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 90 bp TTCCACACAACACAAGAGTTAGCAGTCATCCTTCGACTGATCCTCTaGCCTGCTTTGGCTCACTTCTCACATAAAGTCTCATTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: FHTTQELAVILRLIL*PALAHFSHKVSLKS
Trigger: ACTCTTCAATGAGACTTTATGTGAGAAGTGAGCCAAAGCAGGGCAGAGGATCAGTCGAAGGATGACTGCTAACTCTTGTGTTGTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467657.1
CDS CCA 90 bp AGAAGATGCCAATCAGCACCCCACCGATTCCCACAACAAAGAAGTTaGCGATTCCTGCAAACACATCAATGGTCTCAATGGTTTTCATCT +
Preference number: 5 (lower is better)
Translates to: RRCQSAPHRFPQQRS*RFLQTHQWSQWFSS
Trigger: AGATGAAAACCATTGAGACCATTGATGTGTTTGCAGGAATCGCCAACTTCTTTGTTGTGGGAATCGGTGGGGTGCTGATTGGCATCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCAGAAGTATTTAGATGCACAGAGAGTTTTACATGGATTCCACTGTTGCATCAGTGGCTTGTCTCTCACTaGTGTCGGCTGTCAGACTGT +
Preference number: 5 (lower is better)
Translates to: PEVFRCTESFTWIPLLHQWLVSH*CRLSDC
Trigger: ACAGTCTGACAGCCGACACAAGTGAGAGACAAGCCA...CTGATGCAACAGTGGAATCCATGTAAAACTCTCTGTGCATCTAAATACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CATGGGTGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGATAAATATCGGGAGGTaGAAGTGGAAGCCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: HGWNFIKSCSQICQHSKLINIGR*KWKPCV
Trigger: AACACAGGGCTTCCACTTCAACCTCCCGATATTTAT...CAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp TACAGTTTTTATGTAAATCAATACCCTCACCGCCCAGATAAAACAGTACACCCCAGGCACTTGCATCCTTaGGGGTATCTTCAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: YSFYVNQYPHRPDKTVHPRHLHP*GYLQWE
Trigger: TTCCCACTGAAGATACCCCAAAGGATGCAAGTGCCT...GGGGTGTACTGTTTTATCTGGGCGGTGAGGGTATTGATTTACATAAAAACTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp TGGAACTTCATCAAAAGCTGCTCCCAAATCTGTCAACACAGTAAGCTGGTGGATAACGACTTGAACAAGTaGTACAGGACCACTGTTACT +
Preference number: 5 (lower is better)
Translates to: WNFIKSCSQICQHSKLVDNDLNK*YRTTVT
Trigger: AGTAACAGTGGTCCTGTACAACTTGTTCAAGTCGTT...ATCCACCAGCTTACTGTGTTGACAGATTTGGGAGCAGCTTTTGATGAAGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCGATTGTTTGCCCAGTTaGAGTCATAAGGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSDCLPS*SHKVSL
Trigger: CAGAGACACCTTATGACTCAAACTGGGCAAACAATC...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCAGAAGTATTTAGATGCACAGAGAGTTTTACATGGATTCCACTGTTGCATCAGTGCATGACGTTCCGATaGTTTGCCCAGTTTGAGTCA +
Preference number: 5 (lower is better)
Translates to: PEVFRCTESFTWIPLLHQCMTFR*FAQFES
Trigger: TGACTCAAACTGGGCAAACAATCGGAACGTCATGCA...CTGATGCAACAGTGGAATCCATGTAAAACTCTCTGTGCATCTAAATACTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp GAGGTAACAAATTACAGACTAGTGCAAAACAGTAGGACTCCCACATTCTCCAAATGGTTGGATCAAGTGTaGTTTGGACGAACGAAAGCC +
Preference number: 5 (lower is better)
Translates to: EVTNYRLVQNSRTPTFSKWLDQV*FGRTKA
Trigger: GGCTTTCGTTCGTCCAAACAACACTTGATCCAACCA...TTTGGAGAATGTGGGAGTCCTACTGTTTTGCACTAGTCTGTAATTTGTTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCAGAAGTATTTAGATGCACAGAGAGTTTTACATGGATTCCACTGTTGCATCAGATACATCAGTCTTCATaGCAGGGGGAGACTTCTCAT +
Preference number: 5 (lower is better)
Translates to: PEVFRCTESFTWIPLLHQIHQSS*QGETSH
Trigger: ATGAGAAGTCTCCCCCTGCAATGAAGACTGATGTAT...CTGATGCAACAGTGGAATCCATGTAAAACTCTCTGTGCATCTAAATACTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAAATCTGGCAAAACGACTaGAACAAGTTGTACAGGACC +
Preference number: 5 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQIWQND*NKLYRT
Trigger: GGTCCTGTACAACTTGTTCAAGTCGTTTTGCCAGAT...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCCCAAACACACAGTAGACAGAGGAACAAGTTAAAAACCAGTAGACTCTCAGTATGGATCAAGTGTTGTTaGGACGAACGAAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: PQTHSRQRNKLKTSRLSVWIKCC*DERKPL
Trigger: TAAAGGCTTTCGTTCGTCCAAACAACACTTGATCCA...TACTGAGAGTCTACTGGTTTTTAACTTGTTCCTCTGTCTACTGTGTGTTTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCAGAAGTATTTAGATGCACAGAGAGTTTTACATGGATTCCACTGTTGCATCAGTCTGAGTCGCTGCTATaGCCATCTGCAATAGAAATA +
Preference number: 5 (lower is better)
Translates to: PEVFRCTESFTWIPLLHQSESLL*PSAIEI
Trigger: TATTTCTATTGCAGATGGCAATAGCAGCGACTCAGA...CTGATGCAACAGTGGAATCCATGTAAAACTCTCTGTGCATCTAAATACTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CCTATGAACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAAAGATCCACAGTCACATaGGAACTTTGGTTGGATCAA +
Preference number: 5 (lower is better)
Translates to: PMNLYLVYLTFALSHAQQRSTVT*ELWLDQ
Trigger: TTGATCCAACCAAAGTTCCAATGTGACTGTGGATCT...TTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTTCATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp AACTTGTACCTTGTGTATCTAACCTTTGCTCTGTCTCATGCTCAACAATCCAGCATACAATACTTGACTTaGGTTGGTTTTCCCGAATCA +
Preference number: 5 (lower is better)
Translates to: NLYLVYLTFALSHAQQSSIQYLT*VGFPES
Trigger: TGATTCGGGAAAACCAACCAAAGTCAAGTATTGTAT...GCTGGATTGTTGAGCATGAGACAGAGCAAAGGTTAGATACACAAGGTACAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CAAATCAAATTTTGTTACAACCAACACCAAAGACCTATCAAAGATCCACAGTCACGAATCAGAATCTCCTaGGCTTGTCTCTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: QIKFCYNQHQRPIKDPQSRIRIS*ACLSLV
Trigger: CACAAGTGAGAGACAAGCCAAGGAGATTCTGATTCG...TGACTGTGGATCTTTGATAGGTCTTTGGTGTTGGTTGTAACAAAATTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp CAAATCAAATTTTGTTACAACCAACACCAAAGACCTATCAAAGATCCACAGTCACTCCTCCTCCTAGTATaGCACAACATAAAACCCACC +
Preference number: 5 (lower is better)
Translates to: QIKFCYNQHQRPIKDPQSLLLLV*HNIKPT
Trigger: GGTGGGTTTTATGTTGTGCAATACTAGGAGGAGGAG...TGACTGTGGATCTTTGATAGGTCTTTGGTGTTGGTTGTAACAAAATTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGTGTGCTCCTATGAACTaGTACCTTGTGTATCTAACC +
Preference number: 5 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQCAPMN*YLVYLT
Trigger: GGTTAGATACACAAGGTACAAGTTCATAGGAGCACA...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGAAGTCACATTGGAACTTaGGTTGGATCAAGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRSHIGT*VGSSVV
Trigger: AACAACACTTGATCCAACCAAAGTTCCAATGTGACT...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp TTCAGTGGGAAATCAAAGGACTGTGAGTGGCTTCATTTAATTTCTACACTCAGACAGCAAATAATACGATaGCTACCCATTAGTCACAAA +
Preference number: 5 (lower is better)
Translates to: FSGKSKDCEWLHLISTLRQQIIR*LPISHK
Trigger: TTTGTGACTAATGGGTAGCAATCGTATTATTTGCTG...TCTGAGTGTAGAAATTAAATGAAGCCACTCACAGTCCTTTGATTTCCCACTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS-3UTR CAA 90 bp GCTTCATCCGGACAAAGTGATCTCTTTAATCACGTTTTTAAGAAGAAAGTACAGCCTGTAGTTTTCAAATaGCATTCTGTGCTACTTTCC +
Preference number: 5 (lower is better)
Translates to: ASSGQSDLFNHVFKKKVQPVVFK*HSVLLS
Trigger: GGAAAGTAGCACAGAATGCAATTTGAAAACTACAGG...CTGTACTTTCTTCTTAAAAACGTGATTAAAGAGATCACTTTGTCCGGATGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp TGGGTGCCGCCGGTTGCCGCCAAGGGGACCGGCGGTTaGCCCTCCGAGCGCTCAACGCATCGCGCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: WVPPVAAKGTGG*PSERSTHRARA
Trigger: AGCCCGGGCGCGATGCGTTGAGCGCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 72 bp ATGGGTGCCGCCGGTTGCCGCCAAGGGGACCGGCGGTaGGCCCTCCGAGCGCTCAACGCATCGCGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: MGAAGCRQGDRR*ALRALNASRPG
Trigger: GCCCGGGCGCGATGCGTTGAGCGCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp CTCGCTGCGAGCAGGCGCACTGCCTGGCGAGGCACGTaGAGGGCGACGAGAGGCCGCTGCGCGTACCCTCAG +
Preference number: 6 (lower is better)
Translates to: LAASRRTAWRGT*RATRGRCAYPQ
Trigger: CTGAGGGTACGCGCAGCGGCCTCTCGTCGCCCTGCACGTGCCTCGCCAGGCAGTGCGCCTGCTCGCAGCGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp GCGCCCGCAGGCTCCTCCAGTTGCCCAGTGGTTCCATaGGTGCCGCCGGTTGCCGCCAAGGGGACCGGCGGT +
Preference number: 6 (lower is better)
Translates to: APAGSSSCPVVP*VPPVAAKGTGG
Trigger: ACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 90 bp AGTGGTTCCATGGGTGCCGCCGGTTGCCGCCAAGGGGACCGGCGGTaGGCCCTCCGAGCGCTCAACGCATCGCGCCCGGGCTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SGSMGAAGCRQGDRR*ALRALNASRPGCSA
Trigger: GGCTGAGCAGCCCGGGCGCGATGCGTTGAGCGCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 90 bp CCGCAGGCTCCTCCAGTTGCCCAGTGGTTCCATGGGTGCCGCCGGTaGCCGCCAAGGGGACCGGCGGTTGGCCCTCCGAGCGCTCAACGC +
Preference number: 6 (lower is better)
Translates to: PQAPPVAQWFHGCRR*PPRGPAVGPPSAQR
Trigger: GCGTTGAGCGCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp CTCCAGTTGCCCAGTGGTTCCATGGGTGCCGCCGGTTaGCGCCAAGGGGACCGGCGGTTGGCCCTCCGAGCG +
Preference number: 6 (lower is better)
Translates to: LQLPSGSMGAAG*RQGDRRLALRA
Trigger: CGCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp CCGCAGGCTCCTCCAGTTGCCCAGTGGTTCCATGGGTaGCGCCGGTTGCCGCCAAGGGGACCGGCGGTTGGC +
Preference number: 6 (lower is better)
Translates to: PQAPPVAQWFHG*RRLPPRGPAVG
Trigger: GCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp GCATCGGAGGCAGTGGCGCCCGCAGGCTCCTCCAGTTaGCCAGTGGTTCCATGGGTGCCGCCGGTTGCCGCC +
Preference number: 6 (lower is better)
Translates to: ASEAVAPAGSSS*PVVPWVPPVAA
Trigger: GGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGGGCGCCACTGCCTCCGATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 72 bp CCTCCAGTTGCCCAGTGGTTCCATGGGTGCCGCCGGTaGCCGCCAAGGGGACCGGCGGTTGGCCCTCCGAGC +
Preference number: 6 (lower is better)
Translates to: PPVAQWFHGCRR*PPRGPAVGPPS
Trigger: GCTCGGAGGGCCAACCGCCGGTCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp AGGCAGTGGCGCCCGCAGGCTCCTCCAGTTGCCCAGTaGTTCCATGGGTGCCGCCGGTTGCCGCCAAGGGGA +
Preference number: 6 (lower is better)
Translates to: RQWRPQAPPVAQ*FHGCRRLPPRG
Trigger: TCCCCTTGGCGGCAACCGGCGGCACCCATGGAACCACTGGGCAACTGGAGGAGCCTGCGGGCGCCACTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp CACCGGGTCTCTGCAACCAGAGGGCTAGGTCCTCGCTaGGAGCAGGCGCACTGCCTGGCGAGGCACGTGCAG +
Preference number: 6 (lower is better)
Translates to: HRVSATRGLGPR*EQAHCLARHVQ
Trigger: CTGCACGTGCCTCGCCAGGCAGTGCGCCTGCTCGCAGCGAGGACCTAGCCCTCTGGTTGCAGAGACCCGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp ACTCCCAAATCGGGCTTTCCGGCTTCCAGGTTCCGATaGCCTCCAGACCAGCCGTGGTGGCGGCTTGGGCGG +
Preference number: 6 (lower is better)
Translates to: TPKSGFPASRFR*PPDQPWWRLGR
Trigger: CCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGCCGGAAAGCCCGATTTGGGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp CCGGCTTCCAGGTTCCGATGCCCTCCAGACCAGCCGTaGTGGCGGCTTGGGCGGGATGCCTTCAGTCAAACT +
Preference number: 6 (lower is better)
Translates to: PASRFRCPPDQP*WRLGRDAFSQT
Trigger: AGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp GCTTCCAGGTTCCGATGCCCTCCAGACCAGCCGTGGTaGCGGCTTGGGCGGGATGCCTTCAGTCAAACTGTC +
Preference number: 6 (lower is better)
Translates to: ASRFRCPPDQPW*RLGRDAFSQTV
Trigger: GACAGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 72 bp GGTTCCGATGCCCTCCAGACCAGCCGTGGTGGCGGCTaGGGCGGGATGCCTTCAGTCAAACTGTCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: GSDALQTSRGGG*GGMPSVKLSSL
Trigger: GAGGGAAGACAGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 90 bp CGGCTTCCAGGTTCCGATGCCCTCCAGACCAGCCGTGGTGGCGGCTaGGGCGGGATGCCTTCAGTCAAACTGTCTTCCCTCTCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: RLPGSDALQTSRGGG*GGMPSVKLSSLSEP
Trigger: TGGCTCAGAGAGGGAAGACAGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAACCTGGAAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS TCA 72 bp GTTCTGGCAAGAAGCGCCTGGCTCTGGGCTGCAAATTaGGCACGGTGGTCCCGGCATCTGCGTCTGAGTCGC +
Preference number: 6 (lower is better)
Translates to: VLARSAWLWAAN*ARWSRHLRLSR
Trigger: GCGACTCAGACGCAGATGCCGGGACCACCGTGCTCAATTTGCAGCCCAGAGCCAGGCGCTTCTTGCCAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp GTTCCGATGCCCTCCAGACCAGCCGTGGTGGCGGCTTaGGCGGGATGCCTTCAGTCAAACTGTCTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: VPMPSRPAVVAA*AGCLQSNCLPS
Trigger: AGAGGGAAGACAGTTTGACTGAAGGCATCCCGCCCAAGCCGCCACCACGGCTGGTCTGGAGGGCATCGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 72 bp TGTTCTGGCAAGAAGCGCCTGGCTCTGGGCTGCAAATaGAGCACGGTGGTCCCGGCATCTGCGTCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: CSGKKRLALGCK*STVVPASASES
Trigger: CGACTCAGACGCAGATGCCGGGACCACCGTGCTCAATTTGCAGCCCAGAGCCAGGCGCTTCTTGCCAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp GAGAACTGTTCTGGCAAGAAGCGCCTGGCTCTGGGCTaGAAATTGAGCACGGTGGTCCCGGCATCTGCGTCT +
Preference number: 6 (lower is better)
Translates to: ENCSGKKRLALG*KLSTVVPASAS
Trigger: AGACGCAGATGCCGGGACCACCGTGCTCAATTTGCAGCCCAGAGCCAGGCGCTTCTTGCCAGAACAGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 90 bp TTGGAGAACTGTTCTGGCAAGAAGCGCCTGGCTCTGGGCTGCAAATaGAGCACGGTGGTCCCGGCATCTGCGTCTGAGTCGCTGCTATTG +
Preference number: 6 (lower is better)
Translates to: LENCSGKKRLALGCK*STVVPASASESLLL
Trigger: CAATAGCAGCGACTCAGACGCAGATGCCGGGACCACCGTGCTCAATTTGCAGCCCAGAGCCAGGCGCTTCTTGCCAGAACAGTTCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS TCA 72 bp AAGGTCAGGGGAATGGTCCGGAACCTATTAATGACCTaGGTCAGGACAAAAACACCCAGGGCTCGCCACATG +
Preference number: 6 (lower is better)
Translates to: KVRGMVRNLLMT*VRTKTPRARHM
Trigger: CATGTGGCGAGCCCTGGGTGTTTTTGTCCTGACTCAGGTCATTAATAGGTTCCGGACCATTCCCCTGACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp CAGGTTCTGGAGCAAAGTGATGTCGCTGAGGCCGAATaGTTCGATCTGGCAGATACCAAACAAAGACACCCC +
Preference number: 6 (lower is better)
Translates to: QVLEQSDVAEAE*FDLADTKQRHP
Trigger: GGGGTGTCTTTGTTTGGTATCTGCCAGATCGAAGCATTCGGCCTCAGCGACATCACTTTGCTCCAGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS TCA 72 bp CTGCAAATTGAGCACGGTGGTCCCGGCATCTGCGTCTaGGTCGCTGCTATTGCCATCTGCAATAGAAATAGT +
Preference number: 6 (lower is better)
Translates to: LQIEHGGPGICV*VAAIAICNRNS
Trigger: ACTATTTCTATTGCAGATGGCAATAGCAGCGACTCAGACGCAGATGCCGGGACCACCGTGCTCAATTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp AGCAAAGTGATGTCGCTGAGGCCGAATGCTTCGATCTaGCAGATACCAAACAAAGACACCCCAATGCCAATG +
Preference number: 6 (lower is better)
Translates to: SKVMSLRPNASI*QIPNKDTPMPM
Trigger: CATTGGCATTGGGGTGTCTTTGTTTGGTATCTGCCAGATCGAAGCATTCGGCCTCAGCGACATCACTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp TGCCACTACTTCCCAAGGGCAAGTCATCACCATTTCTaGCCCATATTACTGCGCGAAAGCAGAAAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: CHYFPRASHHHF*PILLRESRKVL
Trigger: CAACACCTTTCTGCTTTCGCGCAGTAATATGGGCCAGAAATGGTGATGACTTGCCCTTGGGAAGTAGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467657.1
CDS CCA 72 bp CTGGCAGCCTTTGGATGTGTGCTTAGGGCAGATTCATaGACTCCAGAGATAATGTCTCTGCTTGTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LAAFGCVLRADS*TPEIMSLLVSP
Trigger: TGGAGAGACAAGCAGAGACATTATCTCTGGAGTCCATGAATCTGCCCTAAGCACACATCCAAAGGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469286.1
CDS CCA 72 bp CAATCAGCACCCCACCGATTCCCACAACAAAGAAGTTaGCGATTCCTGCAAACACATCAATGGTCTCAATGG +
Preference number: 6 (lower is better)
Translates to: QSAPHRFPQQRS*RFLQTHQWSQW
Trigger: CCATTGAGACCATTGATGTGTTTGCAGGAATCGCCAACTTCTTTGTTGTGGGAATCGGTGGGGTGCTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 72 bp CCAATCAGCACCCCACCGATTCCCACAACAAAGAAGTaGGCGATTCCTGCAAACACATCAATGGTCTCAATG +
Preference number: 6 (lower is better)
Translates to: PISTPPIPTTKK*AIPANTSMVSM
Trigger: CATTGAGACCATTGATGTGTTTGCAGGAATCGCCAACTTCTTTGTTGTGGGAATCGGTGGGGTGCTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp GGCTCTCCCATCTTTAGGACTTACAGCCAATTAATCTaGCAGCCTTTGGATGTGTGCTTAGGGCAGATTCAT +
Preference number: 6 (lower is better)
Translates to: GSPIFRTYSQLI*QPLDVCLGQIH
Trigger: ATGAATCTGCCCTAAGCACACATCCAAAGGCTGCCAGATTAATTGGCTGTAAGTCCTAAAGATGGGAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469286.1
CDS CAA 90 bp AAGAAGATGCCAATCAGCACCCCACCGATTCCCACAACAAAGAAGTaGGCGATTCCTGCAAACACATCAATGGTCTCAATGGTTTTCATC +
Preference number: 6 (lower is better)
Translates to: KKMPISTPPIPTTKK*AIPANTSMVSMVFI
Trigger: GATGAAAACCATTGAGACCATTGATGTGTTTGCAGGAATCGCCAACTTCTTTGTTGTGGGAATCGGTGGGGTGCTGATTGGCATCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp CCCACCGATTCCCACAACAAAGAAGTTGGCGATTCCTaGAAACACATCAATGGTCTCAATGGTTTTCATCTG +
Preference number: 6 (lower is better)
Translates to: PTDSHNKEVGDS*KHINGLNGFHL
Trigger: CAGATGAAAACCATTGAGACCATTGATGTGTTTGCAGGAATCGCCAACTTCTTTGTTGTGGGAATCGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS GCA 72 bp CAGTGGTCGAATAGTTATTCCCTTCATTCCCCTGGCTaGGCAGTCAAAAACACATGGAACTGTCTTATACTG +
Preference number: 6 (lower is better)
Translates to: QWSNSYSLHSPG*AVKNTWNCLIL
Trigger: CAGTATAAGACAGTTCCATGTGTTTTTGACTGCGCAGCCAGGGGAATGAAGGGAATAACTATTCGACCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469286.1
CDS CCA 72 bp TCCCTTCATTCCCCTGGCTGCGCAGTCAAAAACACATaGAACTGTCTTATACTGCTCTTCTTCTCATATCCT +
Preference number: 6 (lower is better)
Translates to: SLHSPGCAVKNT*NCLILLFFSYP
Trigger: AGGATATGAGAAGAAGAGCAGTATAAGACAGTTCCATGTGTTTTTGACTGCGCAGCCAGGGGAATGAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469286.1
CDS CAA 72 bp TTAGCAGTCATCCTTCGACTGATCCTCTGCCCTGCTTaGGCTCACTTCTCACATAAAGTCTCATTGAAGAGT +
Preference number: 6 (lower is better)
Translates to: LAVILRLILCPA*AHFSHKVSLKS
Trigger: ACTCTTCAATGAGACTTTATGTGAGAAGTGAGCCAAAGCAGGGCAGAGGATCAGTCGAAGGATGACTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467657.1
CDS CAA 72 bp ATCTTTAGGACTTACAGCCAATTAATCTGGCAGCCTTaGGATGTGTGCTTAGGGCAGATTCATGGACTCCAG +
Preference number: 6 (lower is better)
Translates to: IFRTYSQLIWQP*DVCLGQIHGLQ
Trigger: CTGGAGTCCATGAATCTGCCCTAAGCACACATCCAAAGGCTGCCAGATTAATTGGCTGTAAGTCCTAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469286.1
CDS GCA 72 bp GATCACTCGGATATTATGGGTGAATCGAGTAGTAAATaGCGCTATAAAGCCCAAGAAGATGCCAATCAGCAC +
Preference number: 6 (lower is better)
Translates to: DHSDIMGESSSK*RYKAQEDANQH
Trigger: GTGCTGATTGGCATCTTCTTGGGCTTTATAGCGGCATTTACTACTCGATTCACCCATAATATCCGAGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CCA 72 bp AGGAAAACAAACAGTGGCTCGATCACTCGGATATTATaGGTGAATCGAGTAGTAAATGCCGCTATAAAGCCC +
Preference number: 6 (lower is better)
Translates to: RKTNSGSITRIL*VNRVVNAAIKP
Trigger: GGGCTTTATAGCGGCATTTACTACTCGATTCACCCATAATATCCGAGTGATCGAGCCACTGTTTGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS CAA 72 bp TCAATGGTCTCAATGGTTTTCATCTGGCAAAACGACTaGAACAAGTTGTACAGGACCACTGTTACTGCATCA +
Preference number: 6 (lower is better)
Translates to: SMVSMVFIWQND*NKLYRTTVTAS
Trigger: TGATGCAGTAACAGTGGTCCTGTACAACTTGTTCAAGTCGTTTTGCCAGATGAAAACCATTGAGACCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233969.3
CDS TCA 72 bp AGAGAACTCAGTGTCCTCAGTGTTGGAAGGCATGAATaGATGAAGGATGAACTGTCTTTTGAAGAAATGACA +
Preference number: 6 (lower is better)
Translates to: RELSVLSVGRHE*MKDELSFEEMT
Trigger: TGTCATTTCTTCAAAAGACAGTTCATCCTTCATTCATTCATGCCTTCCAACACTGAGGACACTGAGTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467657.1
CDS GCA 72 bp TGCAAATGTAGGGACAGTACTTATCATCCCAGTCTCTaGCATCTCAATGGCATGTTTTATTTCAAGCTTTTT +
Preference number: 6 (lower is better)
Translates to: CKCRDSTYHPSL*HLNGMFYFKLF
Trigger: AAAAAGCTTGAAATAAAACATGCCATTGAGATGGCAGAGACTGGGATGATAAGTACTGTCCCTACATTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233969.3
ENST00000469286.1
CDS CAA 72 bp ATCAAACAACCGACAATAGATTTCTTCACTGACAGCTaGTTGTTTCTTATTGGACCTCTTGACATCAAGAAA +
Preference number: 6 (lower is better)
Translates to: IKQPTIDFFTDS*LFLIGPLDIKK
Trigger: TTTCTTGATGTCAAGAGGTCCAATAAGAAACAACAAGCTGTCAGTGAAGAAATCTATTGTCGGTTGTTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233969.3
ENST00000469286.1