RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC9A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000090020

Ensembl transcript IDs: ENST00000263980.8, ENST00000374084.2, ENST00000374086.3, ENST00000374089.5, ENST00000447808.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTTGGTGGAAGAGTCTGTaGGGGGACAGGCGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAWWKSL*GDRRCL
Trigger: CAGGCAGCGCCTGTCCCCTCACAGACTCTTCCACCA...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTAGTGTGAGACCTTGGTaGGTCAGCAGTCCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: QPAALSKDRLGGGQGDRASVRPW*VSSPSP
Trigger: GGGGGAGGGACTGCTGACCCACCAAGGTCTCACACT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGAGCAGTTCTGCCAAATaGATTGGGGAGGCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GGASEALVQVREKPGSRESSSAK*IGEAAL
Trigger: CAGAGCTGCCTCCCCAATCCATTTGGCAGAACTGCT...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR GCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCCAGCCCCAGCAGTTCTaGCAAATGGATTGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGQPQQF*QMDWGG
Trigger: GCCTCCCCAATCCATTTGGCAGAACTGCTGGGGCTG...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGTGGGCCCAGCTGCCATaGGGTAGGGGGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GGTTAEPETLWLETKIGLWAQLP*GRGRGR
Trigger: CCTGCCCCTCCCCCTACCGCATGGCAGCTGGGCCCA...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR CCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCAAAGGCAGCACATTCTaGAGCCACGGCCAGTCCTTC +
Preference number: 2 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGKGSTF*SHGQSF
Trigger: GAAGGACTGGCCGTGGCTCCAGAATGTGCTGCCTTT...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR CCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCTTCTGCCAAATGGATTaGGGAGGCAGCTCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFFCQMD*GGSSGG
Trigger: CCCACCAGAGCTGCCTCCCCAATCCATTTGGCAGAA...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR CCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATCTGGGGTGGGGGCTGTaGGCCCAGCTGCCATGCGGT +
Preference number: 2 (lower is better)
Translates to: EPETLWLETKIGLNEEEDLGWGL*AQLPCG
Trigger: ACCGCATGGCAGCTGGGCCCACAGCCCCCACCCCAG...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR CCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCGAGCCAGAGACTCTTTaGTTAGAAACTAAGATTGGT +
Preference number: 2 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFEPETL*LETKIG
Trigger: ACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR CAA 90 bp GGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTaGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGC +
Preference number: 2 (lower is better)
Translates to: GQYPLLLMLYEFQIK*GSILVPLHSDQSLC
Trigger: GCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
3UTR TCA 72 bp GTGGTGGCCAGGGTGACAGAGCTGGCAGGAGGAGTGTaGGACCTTGGTGGGTCAGCAGTCCCTCCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: VVARVTELAGGV*DLGGSAVPPPA
Trigger: GGCTGGGGGAGGGACTGCTGACCCACCAAGGTCTCACACTCCTCCTGCCAGCTCTGTCACCCTGGCCACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR-3UTR CAA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGTTCTGCCAAATGGATaGGGGAGGCAGCTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLVLPNG*GRQLWW
Trigger: CCACCAGAGCTGCCTCCCCAATCCATTTGGCAGAAC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR GCA 72 bp TGGACAGATGGGCCGAGGACCCATGGCCCAGTCCCCTaGAAAAAGGGACACTCTGACTATTGCACAATCCTG +
Preference number: 3 (lower is better)
Translates to: WTDGPRTHGPVP*KKGHSDYCTIL
Trigger: CAGGATTGTGCAATAGTCAGAGTGTCCCTTTTTGCAGGGGACTGGGCCATGGGTCCTCGGCCCATCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
3UTR CCA 72 bp TTCCTGGGTGGGACCACAGCTGAGCCAGAGACTCTTTaGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: FLGGTTAEPETL*LETKIGLNEEE
Trigger: CTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGCCGCCCCGGCCCAGCTaGAGCTCCTCCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREPPRPS*SSSWSS
Trigger: GCTGGACCAGGAGGAGCTGCAGCTGGGCCGGGGCGG...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGTGGGCCCAGCTGCCATaGGGTAGGGGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREWAQLP*GRGRGR
Trigger: CCTGCCCCTCCCCCTACCGCATGGCAGCTGGGCCCA...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCGGCGGCTCTCTGGGGTaGCCTCCGGTGGAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGGGSLG*PPVERW
Trigger: CCACCGCTCCACCGGAGGTCACCCCAGAGAGCCGCC...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGGTATCCTCTGGGAGCTaGGGCTGTCACTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREVSSGS*GCHWAR
Trigger: CCGCGCCCAGTGACAGCCCCAGCTCCCAGAGGATAC...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGGCTGCCTGCTGGCCCTaGTGTTACTGCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREAACWP*CYCPLG
Trigger: CCCCAAGGGGCAGTAACACCAGGGCCAGCAGGCAGC...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTCTGGGGTGGGGGCTGTaGGCCCAGCTGCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRALGWGL*AQLPCG
Trigger: ACCGCATGGCAGCTGGGCCCACAGCCCCCACCCCAG...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGCCGGTGGAGCGGTGGTaGCATCCCCAATCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREPVERW*HPQSSV
Trigger: AACGCTCGATTGGGGATGTCACCACCGCTCCACCGG...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGATCTTCTGCTCCAGCTaGCGGGCCTTCTGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREIFCSS*RAFCLR
Trigger: CCGGAGGCAGAAGGCCCGGCAGCTGGAGCAGAAGAT...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGACAGACTCGGGTGACTaGGGGGAAGCCGGGTCGATG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSRETDSGD*GEAGSM
Trigger: CATCGACCCGGCTTCCCCGCAGTCACCCGAGTCTGT...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGGGGCCCGAGACATGGTaGGTGAGTCCAGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREGPETW*VSPACG
Trigger: CCCACAAGCTGGACTCACCCACCATGTCTCGGGCCC...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGCCCCAGCCATGTGCCTaGTACCCCTGGTTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREPQPCA*YPWFVP
Trigger: GGGGACAAACCAGGGGTACCAGGCACATGGCTGGGG...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTCCAGGCGCGCCGGGCTaGGATTCCGGGGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAPGAPG*DSGEME
Trigger: TTCCATTTCCCCGGAATCTCAGCCCGGCGCGCCTGG...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGGGAGGCCGATGTTGTTaGTCTGCTCACCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREGGRCC*SAHRPP
Trigger: TGGTGGGCGGTGAGCAGATCAACAACATCGGCCTCC...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCCCAGCACGCGGGCGATaGGGCAGAAGAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGPARGR*GRRAGC
Trigger: GCACCCTGCTCTTCTGCCTCATCGCCCGCGTGCTGG...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGTCGGGAGGTGAAGGCTaGGATGACCCCGTAGACCAC +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSRESGGEG*DDPVDH
Trigger: GTGGTCTACGGGGTCATCGCAGCCTTCACCTCCCGA...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTCGGCAGAGGGGATCTTaGCCATGCCCCCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRARQRGS*PCPRSP
Trigger: TGGAGAGCGGGGGCATGGGCAAGATCCCCTCTGCCG...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTCTGGAACTCCGGGCCTaGGAAGGGGGAGGACGGATG +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRALELRA*EGGGRM
Trigger: CATCCGTCCTCCCCCTTCCCAGGCCCGGAGTTCCAG...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTAACAGGGCGGCTCTCTaGGGTGACCTCCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRANRAAL*GDLRWS
Trigger: GCTCCACCGGAGGTCACCCCAGAGAGCCGCCCTGTT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTGTCCAGTTCCAGTGGTaGGAGCCGGCCACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAVQFQW*EPATVE
Trigger: CTCCACGGTGGCCGGCTCCCACCACTGGAACTGGAC...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGGTCCTTGGACAGTGCTaGCAGGATGCGCTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREVLGQC*QDALGR
Trigger: CCTTCCGAGCGCATCCTGCCAGCACTGTCCAAGGAC...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGGCCCAGTGGTCCCCGTaGGAGCACAGTTCGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREAQWSP*EHSSKS
Trigger: GCTTTTCGAACTGTGCTCCCACGGGGACCACTGGGC...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGTTCTCGTGGTGGCTCTaGGCTTCGAATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREFSWWL*ASNGAG
Trigger: GCCAGCACCATTCGAAGCTCAGAGCCACCACGAGAA...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCGTCCACAGACTCGGGTaGCTGCGGGGAAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFVHRLG*LRGSRV
Trigger: GACCCGGCTTCCCCGCAGTCACCCGAGTCTGTGGAC...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTGTGGGCCTGGGTCACTaGGGCAGCGCTGTATCCTCT +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAVGLGH*GSAVSS
Trigger: AGAGGATACAGCGCTGCCTCAGTGACCCAGGCCCAC...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCTGGGGTGACCTCCGGTaGAGCGGTGGTGACATCCCC +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGWGDLR*SGGDIP
Trigger: GGGGATGTCACCACCGCTCCACCGGAGGTCACCCCA...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCCTCAGGGTGTGGGCCTaGGTCACTGAGGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGLRVWA*VTEAAL
Trigger: CAGCGCTGCCTCAGTGACCCAGGCCCACACCCTGAG...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCCCACCGCCTCCACAATaGGCTCCACAGCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGPPPPQ*APQQAG
Trigger: CCCTGCCTGCTGTGGAGCCCATTGTGGAGGCGGTGG...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCCACTGGGCGCGGGGGTaGAGACATCGTCGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFHWARG*RHRRFL
Trigger: CAGGAACCGACGATGTCTTCACCCCCGCGCCCAGTG...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGGGACAGGCGCTGCCTaGTGGCCCTGGTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLGTGAA*WPWCYC
Trigger: GCAGTAACACCAGGGCCAGCAGGCAGCGCCTGTCCC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTTGCGGGCCCGAGACATaGTGGGTGAGTCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRACGPET*WVSPAC
Trigger: ACAAGCTGGACTCACCCACCATGTCTCGGGCCCGCA...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCGCAGGCAGAGAGACGTaGGGGAGGGGTTGGACAGAC +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGAGRET*GRGWTD
Trigger: GTCTGTCCAACCCCTCCCCCACGTCTCTCTGCCTGC...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGGTCCACGGCCGAGATaGTGCTGCCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLGPRPR*CCRRAG
Trigger: ACCTGCTCTTCGGCAGCATCATCTCGGCCGTGGACC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGAGCGCCATGATGCCTaGCAGGTGGAAGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLERHDA*QVEELG
Trigger: GCCGAGCTCTTCCACCTGTCAGGCATCATGGCGCTC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCCCGAGACATGGTGGGTaGGTCCAGCTTGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFPRHGG*VQLVGW
Trigger: CCAGCCCACAAGCTGGACTCACCCACCATGTCTCGG...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTACCGCAGAACCATGGTaGTGCTTCCAGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRATAEPW*CFQSQP
Trigger: AGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGGGAAGATGTCCACGATaGCCACGTGTTCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREGRCPR*PRVRSW
Trigger: CCAACTACGAACACGTGGGCATCGTGGACATCTTCC...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGATGCCTGTCAGAAGGTaGTCCAGGAACTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREMPVRR*SRNCVW
Trigger: CCACACACAGTTCCTGGACCACCTTCTGACAGGCAT...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTACCGCAGCCGCTGCCTaGTCTTCTGCAAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRATAAAA*SSASCS
Trigger: GGAACAACTTGCAGAAGACCAGGCAGCGGCTGCGGT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCCTaGGTGGGACCACAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLSSLPS*VGPQLS
Trigger: GCTCAGCTGTGGTCCCACCCAGGAAGGGAGGGAGCT...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGACAGCAGGCAGGGTGTaGTACACACAAGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSRETAGRV*YTQGKG
Trigger: ACCTTTCCCTTGTGTGTACCACACCCTGCCTGCTGT...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCGCTGAGGAAAGTGACTaGGGAGCTGGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFAEESD*GAGTLG
Trigger: GCCCAGAGTCCCAGCTCCTCAGTCACTTTCCTCAGC...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTCTCCGGGACGATGCTTaGGATAGTGGGGATCACATG +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRALRDDA*DSGDHM
Trigger: CATGTGATCCCCACTATCTCAAGCATCGTCCCGGAG...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCTGTGGTAGAAGGCAATaGGCTGGGGCTCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGCGRRQ*AGAPWS
Trigger: GCTCCAAGGAGCCCCAGCTCATTGCCTTCTACCACA...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCCTCCTCAGCCACCTTTaGAGGATCCCGGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLLLSHL*RIPAQP
Trigger: GGGTTGAGCCGGGATCCTGCAAAGGTGGCTGAGGAG...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCTGGCCCTGGTGTTACTaGCCCTTGGGGAAGAACGGT +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGWPWCY*PLGKNG
Trigger: ACCGTTCTTCCCCAAGGGGCAGTAACACCAGGGCCA...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTCTACCAGGGGCCGAATaGTCATGCCCTGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRALPGAE*SCPAQR
Trigger: TCTTTGTGCAGGGCATGACCATTCGGCCCCTGGTAG...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCTCTGCATGGAGACGGTaGAGACGGCAGAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGSAWRR*RRQRGS
Trigger: AGATCCCCTCTGCCGTCTCCACCGTCTCCATGCAGA...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCCAGCGCTGTATCCTCTaGGAGCTGGGGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLQRCIL*ELGLSL
Trigger: CAGTGACAGCCCCAGCTCCCAGAGGATACAGCGCTG...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGTGTGAGACCTTGGTaGGTCAGCAGTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLSVRPW*VSSPSP
Trigger: GGGGGAGGGACTGCTGACCCACCAAGGTCTCACACT...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTACTATTGCACAATCCTaGGGGAGTGCCCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRATIAQS*GSAPGT
Trigger: TGTCCCTGGGGCACTCCCCCAGGATTGTGCAATAGT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCTGGGCCGAGGACCCATaGCCCAGTCCCCTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFWAEDP*PSPLQK
Trigger: TTTTTGCAGGGGACTGGGCCATGGGTCCTCGGCCCA...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTACGGATGTGGGAAACTaGGCCCTAGGGATAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRATDVGN*ALGIEE
Trigger: TTCCTCTATCCCTAGGGCTCAGTTTCCCACATCCGT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTGGAAACCTATCTTCATaGGGCAGGCCAGAAGGATCC +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAGNLSS*GRPEGS
Trigger: GGATCCTTCTGGCCTGCCTCATGAAGATAGGTTTCC...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCGTGGAAGAGCTCGGCTaGCAAGTAGGCCATGTAGCT +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGVEELG*QVGHVA
Trigger: AGCTACATGGCCTACTTGTCAGCCGAGCTCTTCCAC...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCAGGCGTTCCACAGCGTaGCCACCACGGCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFRRSTA*PPRQRS
Trigger: TGATCTTTGCCGTGGTGGGCACGCTGTGGAACGCCT...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCCCGATGTTGTTGATCTaGTCACCGCCCACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLPMLLI*SPPTRH
Trigger: GTGCCTGGTGGGCGGTGAGCAGATCAACAACATCGG...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCCAGCCCCAGCAGTTCTaGCAAATGGATTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLQPQQF*QMDWGG
Trigger: GCCTCCCCAATCCATTTGGCAGAACTGCTGGGGCTG...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTGAAGGCTGGGACCTTTaGCTGAGGAAAGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAEGWDL*LRKVTE
Trigger: CTCAGTCACTTTCCTCAGCCAAAGGTCCCAGCCTTC...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCGGGGTGGAGGGAGGCTaGGTTTGCAATCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFGVEGG*VCNLEL
Trigger: GAGTTCCAGATTGCAAACCCAGCCTCCCTCCACCCC...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCCAGACCGCAGAACCATaGTGCTGCTTCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLQTAEP*CCFQSQ
Trigger: CTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTG...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCTGTGAACTGCCGCAGTaGCAGGAAGTAGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLCELPQ*QEVARI
Trigger: GATGCGGGCTACTTCCTGCCACTGCGGCAGTTCACA...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGTCCAGGAACTGTGTGTaGATCTCTTCGTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSRESRNCV*ISSLME
Trigger: CTCCATCAACGAAGAGATCCACACACAGTTCCTGGA...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGGCAGGGACTTGGGGTaGATGTTCTGCATGGAGACG +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLGRDLG*MFCMET
Trigger: CGTCTCCATGCAGAACATCCACCCCAAGTCCCTGCC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCCCTCCTCCTTGTCCTTaGACAGTGCTGGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFPPPCP*TVLAGC
Trigger: GCATCCTGCCAGCACTGTCCAAGGACAAGGAGGAGG...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCGTCCAGCTTGTGGGCTaGCACCGTCAGGTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGVQLVG*HRQVVV
Trigger: AACAACTACCTGACGGTGCCAGCCCACAAGCTGGAC...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGGAGTGTGAGACCTTaGTGGGTCAGCAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLRSVRP*WVSSPS
Trigger: GGAGGGACTGCTGACCCACCAAGGTCTCACACTCCT...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTAACTCCTCAAAGAGGTaGTACAGGACCACAGTGACG +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRANSSKR*YRTTVT
Trigger: CGTCACTGTGGTCCTGTATCACCTCTTTGAGGAGTT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCTTCCTCGTAGGGGTCTaGCACCAGCGTGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFFLVGV*HQRVSV
Trigger: AACAGACACACGCTGGTGGCAGACCCCTACGAGGAA...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGAGATTCCGGGGAAATaGAAAGAGGCGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLEIPGK*KEAEGR
Trigger: CCTGCCTTCCGCCTCTTTCCATTTCCCCGGAATCTC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTAGGAAGAAGGAAGGCTaGGACCTTTGGCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRARKKEG*DLWLRK
Trigger: TTTCCTCAGCCAAAGGTCCCAGCCTTCCTTCTTCCT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGAGAGAGGCATTTCCATaGAAGCAATTTTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSREREAFP*KQFSGG
Trigger: ACCCCCAGAAAATTGCTTCCATGGAAATGCCTCTCT...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCATGATGCCTGACAGGTaGAAGAGCTCGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGMMPDR*KSSADK
Trigger: CTTGTCAGCCGAGCTCTTCCACCTGTCAGGCATCAT...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGGTGTTACTGCCCCTTaGGGAAGAACGGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLGVTAP*GRTVLP
Trigger: AGGGAGAACCGTTCTTCCCCAAGGGGCAGTAACACC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGCAGGCTGAGAAGGAGTaGAACCGGGAAGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLQAEKE*NREAAG
Trigger: CCCGGCCGCTTCCCGGTTTCACTCCTTCTCAGCCTG...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGGGAGGCCATGGCTCCTaGGAACAGGCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLGGHGS*EQAAAP
Trigger: TGGGGCTGCTGCCTGTTCTCAGGAGCCATGGCCTCC...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGTGTGCAGCAGCTCATTaGTGTGAATTTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GGASEALVQVREKPGSRECAAAH*CEFPQR
Trigger: TCTTTGAGGAAATTCACATCAATGAGCTGCTGCACA...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp ACCGTGCCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGCCAGCACGCGGGCGATaGGGCAGAAGAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: TVPGQYPLLLMLYEFQIKPARGR*GRRAGC
Trigger: GCACCCTGCTCTTCTGCCTCATCGCCCGCGTGCTGG...CTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGGCACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCACCAGCTCGATGGCCTaGTTCATCTCCATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLTSSMA*FISILW
Trigger: CCACAAGATGGAGATGAAGCAGGCCATCGAGCTGGT...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGGACACTCTGACTATTaGACAATCCTGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLGHSDY*TILGEC
Trigger: GCACTCCCCCAGGATTGTGCAATAGTCAGAGTGTCC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCTCTCCACCAGCTCGATaGCCTGCTTCATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFSPPAR*PASSPS
Trigger: AGATGGAGATGAAGCAGGCCATCGAGCTGGTGGAGA...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCAGCAGTTCTGCCAAATaGATTGGGGAGGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFSSSAK*IGEAAL
Trigger: CAGAGCTGCCTCCCCAATCCATTTGGCAGAACTGCT...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTAAACTAAGATTGGTCTaGATGAGGAGGAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAKLRLV*MRRRMR
Trigger: CCTCATCCTCCTCCTCATTCAGACCAATCTTAGTTT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCACAGACAGGCACAGATaGGGAAGGGTAATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFTDRHR*GRVILE
Trigger: CTCCAGAATTACCCTTCCTCATCTGTGCCTGTCTGT...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTTATTTGATGGTGGTGTaGGACTTGTGGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAYLMVV*DLWEML
Trigger: CAACATCTCCCACAAGTCCCACACCACCATCAAATA...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAAGGTCCAGTTCCAGTaGTGGGAGCCGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLKVQFQ*WEPATV
Trigger: CACGGTGGCCGGCTCCCACCACTGGAACTGGACCTT...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp AGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATCACAAGGCGGCTCTCTGGGGTaGCCTCCGGTGGAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SILVPLHSDQSLCNDSSQGGSLG*PPVERW
Trigger: CCACCGCTCCACCGGAGGTCACCCCAGAGAGCCGCC...TTGTGATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp GGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCGGCACACGGCGTACATaGGGCCGCCCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GQYPLLLMLYEFQIKLGSGTRRT*GRPGRR
Trigger: CCTTCTTCCTGGGCGGCCTCATGTACGCCGTGTGCC...GCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGCTGGCAGGAGGAGTGTaGGACCTTGGTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLLAGGV*DLGGSA
Trigger: TGCTGACCCACCAAGGTCTCACACTCCTCCTGCCAG...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCCAAAAAGGGACACTCTaGCTATTGCACAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLQKGTL*LLHNPG
Trigger: CCCAGGATTGTGCAATAGTCAGAGTGTCCCTTTTTG...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGCTGGGTTTGCAATCTaGAACTCCAAAGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLAGFAI*NSKVGK
Trigger: TTTCCCCACTTTGGAGTTCCAGATTGCAAACCCAGC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCCCACGTGTTCGTAGTTaGCAAACTCCTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFPRVRS*QTPQRG
Trigger: ACCTCTTTGAGGAGTTTGCCAACTACGAACACGTGG...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGTGCCCAGGTTTTCTGTaGACTGCCGCAGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLCPGFL*TAAVAG
Trigger: TCCTGCCACTGCGGCAGTTCACAGAAAACCTGGGCA...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATGGCACACGGCGTACATaGGGCCGCCCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDGTRRT*GRPGRR
Trigger: CCTTCTTCCTGGGCGGCCTCATGTACGCCGTGTGCC...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGGCGCATCACCACTCCTaGGGCTATGAGCGCCATGAT +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLAHHHS*GYERHD
Trigger: ATCATGGCGCTCATAGCCTCAGGAGTGGTGATGCGC...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGGCAGAACCATGGTGCTaGTTCCAGAGCCAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLAEPWC*FQSQPR
Trigger: TCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGC...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGGAGAGAGGCCACAGATaGCAGACCGCAGAACCATGG +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLERGHR*QTAEPW
Trigger: CCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTC...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATGTGGGTCTGAGCCGATaGGGGCCCGAGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDVGLSR*GPETWW
Trigger: CCACCATGTCTCGGGCCCGCATCGGCTCAGACCCAC...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCTCAACCCTAAGACTTTaGCCTTCAGCTCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGSTLRL*PSALHS
Trigger: TGAATGAAGAGCTGAAGGGCAAAGTCTTAGGGTTGA...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGTGGGACTCTGGGCTGTaGGCTAAAGGAAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLWDSGL*AKGRGR
Trigger: CCTACCCCTTCCTTTAGCCCACAGCCCAGAGTCCCA...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATAACAGGGCGGCTCTCTaGGGTGACCTCCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: WAAFWFLYILISHSAMTHNRAAL*GDLRWS
Trigger: GCTCCACCGGAGGTCACCCCAGAGAGCCGCCCTGTT...ATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp ACCGTGCCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGGTCGATGCCCAGGACTaGAAAGGCCTTGCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: TVPGQYPLLLMLYEFQIKVDAQD*KGLARL
Trigger: AAGCCGCGCAAGGCCTTTCCAGTCCTGGGCATCGAC...CTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGGCACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGGGTGGATGTTCTGCATaGAGACGGTGGAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLGGCSA*RRWRRQ
Trigger: CTGCCGTCTCCACCGTCTCCATGCAGAACATCCACC...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATACAGGCGCTGCCTGCTaGCCCTGGTGTTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDTGAAC*PWCYCP
Trigger: GGGGCAGTAACACCAGGGCCAGCAGGCAGCGCCTGT...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATAGCCCGCATCCAGGATaGTGGGCGGCAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDSPHPG*WAAAGR
Trigger: TCTTCCTGCTGCCGCCCATCATCCTGGATGCGGGCT...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp ACCGTGCCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTGCCCAGGTTTTCTGTaGACTGCCGCAGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TVPGQYPLLLMLYEFQIKCPGFL*TAAVAG
Trigger: TCCTGCCACTGCGGCAGTTCACAGAAAACCTGGGCA...CTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGGCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATTGGTGGAAGAGTCTGTaGGGGGACAGGCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDWWKSL*GDRRCL
Trigger: CAGGCAGCGCCTGTCCCCTCACAGACTCTTCCACCA...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp ACCGTGCCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGCTGGTCTCAAACTCCTaGCCTCAGGTGATCCACCCC +
Preference number: 4 (lower is better)
Translates to: TVPGQYPLLLMLYEFQIKLVSNS*PQVIHP
Trigger: GGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAG...CTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGGCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAGATCTCGAAGGGGGTaGGCACGTGTGTGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLRSRRG*ARVCSR
Trigger: TCGACTACACACACGTGCGCACCCCCTTCGAGATCT...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATAGGGGATCTTGCCCATaGCCCCGCTCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDRGSCP*PRSPPA
Trigger: AGCTGGTGGAGAGCGGGGGCATGGGCAAGATCCCCT...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGCGTAGAAACCACCCCTaGTCCAGGCAGAGACACTCA +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLRRNHP*SRQRHS
Trigger: TGAGTGTCTCTGCCTGGAGCAGGGGTGGTTTCTACG...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGCATGGCCCAGTCCCCTaGAAAAAGGGACACTCTGAC +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLHGPVP*KKGHSD
Trigger: GTCAGAGTGTCCCTTTTTGCAGGGGACTGGGCCATG...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGTCTGGAACTCCAAAGTaGGGAAAGGGGGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLSGTPK*GKGART
Trigger: GGTCCTTGCCCCCTTTCCCCACTTTGGAGTTCCAGA...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAGGGAAGATCCGATGTaGAGAGAGGCCACAGATGCC +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLREDPM*REATDA
Trigger: GGCATCTGTGGCCTCTCTCCACATCGGATCTTCCCT...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATAAGGTCCAGTTCCAGTaGTGGGAGCCGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: WAAFWFLYILISHSAMTHKVQFQ*WEPATV
Trigger: CACGGTGGCCGGCTCCCACCACTGGAACTGGACCTT...ATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAAAGGCAGCACATTCTaGAGCCACGGCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLKGSTF*SHGQSF
Trigger: GAAGGACTGGCCGTGGCTCCAGAATGTGCTGCCTTT...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp ACCGTGCCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGCTCCGGGACGATGCTTaGGATAGTGGGGATCACATG +
Preference number: 4 (lower is better)
Translates to: TVPGQYPLLLMLYEFQIKLRDDA*DSGDHM
Trigger: CATGTGATCCCCACTATCTCAAGCATCGTCCCGGAG...CTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGGCACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATCCTTGCTCCGCATCATaGTGCCCCCATCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDPCSAS*CPHRRP
Trigger: AGGACGACGATGGGGGCATCATGATGCGGAGCAAGG...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGCAGTTCGAAAAGCTCTaGGTCACGTCACTGTCACCG +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLQFEKL*VTSLSP
Trigger: CGGTGACAGTGACGTGACTCAGAGCTTTTCGAACTG...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp CCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGGGAAGATCCGATGTaGAGAGAGGCCACAGATGCC +
Preference number: 4 (lower is better)
Translates to: PGQYPLLLMLYEFQIKLGREDPM*REATDA
Trigger: GGCATCTGTGGCCTCTCTCCACATCGGATCTTCCCT...GCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp TCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTTGGGGTGACCTCCGGTaGAGCGGTGGTGACATCCCC +
Preference number: 4 (lower is better)
Translates to: SKLSWAAFWFLYILISHSWGDLR*SGGDIP
Trigger: GGGGATGTCACCACCGCTCCACCGGAGGTCACCCCA...AGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATGTCGATGCCCAGGACTaGAAAGGCCTTGCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDVDAQD*KGLARL
Trigger: AAGCCGCGCAAGGCCTTTCCAGTCCTGGGCATCGAC...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp TTCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCGTCCAGTTCCAGTGGTaGGAGCCGGCCACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: FQIKLGSILVPLHSDQSLVQFQW*EPATVE
Trigger: CTCCACGGTGGCCGGCTCCCACCACTGGAACTGGAC...GAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp TACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCATTCTGCCGGTGGAGCGGTGGTaGCATCCCCAATCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: YPLLLMLYEFQIKLGSILPVERW*HPQSSV
Trigger: AACGCTCGATTGGGGATGTCACCACCGCTCCACCGG...CAGAATGCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp AAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAAGCCCGCATCCAGGATaGTGGGCGGCAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KLSWAAFWFLYILISHSASPHPG*WAAAGR
Trigger: TCTTCCTGCTGCCGCCCATCATCCTGGATGCGGGCT...TGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp TTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGGGAGGCCGATGTTGTTaGTCTGCTCACCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LSWAAFWFLYILISHSAMGGRCC*SAHRPP
Trigger: TGGTGGGCGGTGAGCAGATCAACAACATCGGCCTCC...CATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp TCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGGTCCACGGCCGAGATaGTGCTGCCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SKLSWAAFWFLYILISHSGPRPR*CCRRAG
Trigger: ACCTGCTCTTCGGCAGCATCATCTCGGCCGTGGACC...AGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp TTCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCGAGCGCCATGATGCCTaGCAGGTGGAAGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: FQIKLGSILVPLHSDQSLERHDA*QVEELG
Trigger: GCCGAGCTCTTCCACCTGTCAGGCATCATGGCGCTC...GAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGGAGGGAGGCTGGGTTTaGAATCTGGAACTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLEGGWV*NLELQS
Trigger: ACTTTGGAGTTCCAGATTGCAAACCCAGCCTCCCTC...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGCGAATGGTCATGCCCTaGACAAAGACGGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLRMVMP*TKTVKK
Trigger: CTTCTTCACCGTCTTTGTGCAGGGCATGACCATTCG...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATCTTGTCCTTGGACAGTaGTGGCAGGATGCGCTCGGA +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDLVLGQ*WQDALG
Trigger: TCCGAGCGCATCCTGCCAGCACTGTCCAAGGACAAG...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCTCGATGACCCGGATGTaGGAGGTAAATCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GQYPLLLMLYEFQIKLGSSMTRM*EVNREV
Trigger: CACCTCCCGATTTACCTCCCACATCCGGGTCATCGA...GCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp ACCGTGCCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGATGATGCCTGACAGGTaGAAGAGCTCGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: TVPGQYPLLLMLYEFQIKMMPDR*KSSADK
Trigger: CTTGTCAGCCGAGCTCTTCCACCTGTCAGGCATCAT...CTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGGCACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp GGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCGGAAACCTATCTTCATaGGGCAGGCCAGAAGGATCC +
Preference number: 4 (lower is better)
Translates to: GQYPLLLMLYEFQIKLGSGNLSS*GRPEGS
Trigger: GGATCCTTCTGGCCTGCCTCATGAAGATAGGTTTCC...GCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp TTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACCGCAGAACCATGGTaGTGCTTCCAGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSWAAFWFLYILISHSAMTAEPW*CFQSQP
Trigger: AGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGT...CATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATGGACTGGAAAGGCCTTaGGCGGCTTCATGCCATGAT +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDGLERP*AASCHD
Trigger: ATCATGGCATGAAGCCGCGCAAGGCCTTTCCAGTCC...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATCGTGTGTGTAGTCGATaGCCAGGACTGGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDRVCSR*PGLERP
Trigger: AGGCCTTTCCAGTCCTGGGCATCGACTACACACACG...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp TTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGAGGCGTTCCACAGCGTaGCCACCACGGCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: LSWAAFWFLYILISHSAMRRSTA*PPRQRS
Trigger: TGATCTTTGCCGTGGTGGGCACGCTGTGGAACGCCT...CATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp TTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGCCGATGTTGTTGATCTaGTCACCGCCCACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LSWAAFWFLYILISHSAMPMLLI*SPPTRH
Trigger: GTGCCTGGTGGGCGGTGAGCAGATCAACAACATCGG...CATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp TTCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTCGGGAGGTGAAGGCTaGGATGACCCCGTAGACCAC +
Preference number: 4 (lower is better)
Translates to: FQIKLGSILVPLHSDQSLSGGEG*DDPVDH
Trigger: GTGGTCTACGGGGTCATCGCAGCCTTCACCTCCCGA...GAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATTTGGGGTGGATGTTCTaGATGGAGACGGTGGAGACG +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDLGWMF*METVET
Trigger: CGTCTCCACCGTCTCCATGCAGAACATCCACCCCAA...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp TTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGCCCTGGCCCAGCACCTaGACAAAGACGGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSWAAFWFLYILISHSAMPWPST*TKTVKK
Trigger: CTTCTTCACCGTCTTTGTGCAGGTGCTGGGCCAGGG...CATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATTCGATGACCCGGATGTaGGAGGTAAATCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDSMTRM*EVNREV
Trigger: CACCTCCCGATTTACCTCCCACATCCGGGTCATCGA...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATGACATCGTCGGTTCCTaGGGACGAAGTCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDDIVGS*GRSLLA
Trigger: AGCAAGGAGACTTCGTCCCCAGGAACCGACGATGTC...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp TCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTTTCTCGTGGTGGCTCTaGGCTTCGAATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SKLSWAAFWFLYILISHSFSWWL*ASNGAG
Trigger: GCCAGCACCATTCGAAGCTCAGAGCCACCACGAGAA...AGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp TTCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCGCGCATCACCACTCCTaGGGCTATGAGCGCCATGAT +
Preference number: 4 (lower is better)
Translates to: FQIKLGSILVPLHSDQSLAHHHS*GYERHD
Trigger: ATCATGGCGCTCATAGCCTCAGGAGTGGTGATGCGC...GAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp AGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATCACAAGCAGAACCATGGTGCTaGTTCCAGAGCCAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: SILVPLHSDQSLCNDSSQAEPWC*FQSQPR
Trigger: TCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGC...TTGTGATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp AGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATCACAAGAGAGAGGCCACAGATaGCAGACCGCAGAACCATGG +
Preference number: 4 (lower is better)
Translates to: SILVPLHSDQSLCNDSSQERGHR*QTAEPW
Trigger: CCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTC...TTGTGATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGCAGGAGCGCCCTCTGTaGAAACAATCATATATAGGA +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLQERPL*KQSYIG
Trigger: TCCTATATATGATTGTTTGCACAGAGGGCGCTCCTG...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp AAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAGGGGTGGAGGGAGGCTaGGTTTGCAATCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: KLSWAAFWFLYILISHSAGVEGG*VCNLEL
Trigger: GAGTTCCAGATTGCAAACCCAGCCTCCCTCCACCCC...TGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp AAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCACAGACCGCAGAACCATaGTGCTGCTTCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KLSWAAFWFLYILISHSAQTAEP*CCFQSQ
Trigger: CTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTG...TGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp TTCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGTGAACTGCCGCAGTaGCAGGAAGTAGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: FQIKLGSILVPLHSDQSLCELPQ*QEVARI
Trigger: GATGCGGGCTACTTCCTGCCACTGCGGCAGTTCACA...GAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp TGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATAACTCCTCAAAGAGGTaGTACAGGACCACAGTGACG +
Preference number: 4 (lower is better)
Translates to: WAAFWFLYILISHSAMTHNSSKR*YRTTVT
Trigger: CGTCACTGTGGTCCTGTATCACCTCTTTGAGGAGTT...ATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp TACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCATTCTGGTGGAAGAGCTCGGCTaGCAAGTAGGCCATGTAGCT +
Preference number: 4 (lower is better)
Translates to: YPLLLMLYEFQIKLGSILVEELG*QVGHVA
Trigger: AGCTACATGGCCTACTTGTCAGCCGAGCTCTTCCAC...CAGAATGCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATTGTGGATCTCTTCGTTaGTGGAGCGCTTCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDCGSLR*WSASSL
Trigger: AAGAGACGAAGCGCTCCATCAACGAAGAGATCCACA...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp AAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAGGACTGGAAAGGCCTTaGGCGGCTTCATGCCATGAT +
Preference number: 4 (lower is better)
Translates to: KLSWAAFWFLYILISHSAGLERP*AASCHD
Trigger: ATCATGGCATGAAGCCGCGCAAGGCCTTTCCAGTCC...TGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp AAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCACGTGTGTGTAGTCGATaGCCAGGACTGGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KLSWAAFWFLYILISHSARVCSR*PGLERP
Trigger: AGGCCTTTCCAGTCCTGGGCATCGACTACACACACG...TGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp TTCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCAGATCTCGAAGGGGGTaGGCACGTGTGTGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: FQIKLGSILVPLHSDQSLRSRRG*ARVCSR
Trigger: TCGACTACACACACGTGCGCACCCCCTTCGAGATCT...GAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATCACAGATGTCTTCGATaGCTGTCAGAAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDHRCLR*LSEGGP
Trigger: TGGACCACCTTCTGACAGGCATCGAAGACATCTGTG...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATCGCTGCCTGGTCTTCTaGAAGTTGTTCCTCAGGATT +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDRCLVF*KLFLRI
Trigger: AATCCTGAGGAACAACTTGCAGAAGACCAGGCAGCG...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CCA 90 bp AGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATCACAATCTGGAACTCCAAAGTaGGGAAAGGGGGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: SILVPLHSDQSLCNDSSQSGTPK*GKGART
Trigger: GGTCCTTGCCCCCTTTCCCCACTTTGGAGTTCCAGA...TTGTGATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGATAGTGGGGATCACATaGAAACCTATCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: GGTTAEPETLWLETKIGLIVGIT*KPIFMR
Trigger: CCTCATGAAGATAGGTTTCCATGTGATCCCCACTAT...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR TCA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATAGTGGGAGTTACTTCTaGTGTCACAGTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: EPETLWLETKIGLNEEEDSGSYF*CHSLRA
Trigger: TGCTCGAAGACTGTGACATCAGAAGTAACTCCCACT...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR GCA 90 bp TCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGGAAGATGTCCACGATaGCCACGTGTTCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SKLSWAAFWFLYILISHSGRCPR*PRVRSW
Trigger: CCAACTACGAACACGTGGGCATCGTGGACATCTTCC...AGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR GCA 90 bp TACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCATTCTGGAGGGAGGCTGGGTTTaGAATCTGGAACTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: YPLLLMLYEFQIKLGSILEGGWV*NLELQS
Trigger: ACTTTGGAGTTCCAGATTGCAAACCCAGCCTCCCTC...CAGAATGCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp TCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCTGGGTTTGCAATCTaGAACTCCAAAGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SKLSWAAFWFLYILISHSAGFAI*NSKVGK
Trigger: TTTCCCCACTTTGGAGTTCCAGATTGCAAACCCAGC...AGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp AGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATCACAACCACGTGTTCGTAGTTaGCAAACTCCTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SILVPLHSDQSLCNDSSQPRVRS*QTPQRG
Trigger: ACCTCTTTGAGGAGTTTGCCAACTACGAACACGTGG...TTGTGATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp TTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGTATTTGATGGTGGTGTaGGACTTGTGGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LSWAAFWFLYILISHSAMYLMVV*DLWEML
Trigger: CAACATCTCCCACAAGTCCCACACCACCATCAAATA...CATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp AGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATCACAAAGAGAGGCATTTCCATaGAAGCAATTTTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SILVPLHSDQSLCNDSSQREAFP*KQFSGG
Trigger: ACCCCCAGAAAATTGCTTCCATGGAAATGCCTCTCT...TTGTGATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR TCA 90 bp TACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCATTCTGTGTGCAGCAGCTCATTaGTGTGAATTTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: YPLLLMLYEFQIKLGSILCAAAH*CEFPQR
Trigger: TCTTTGAGGAAATTCACATCAATGAGCTGCTGCACA...CAGAATGCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp TCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTATAGTGGGGATCACATaGAAACCTATCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: SKLSWAAFWFLYILISHSIVGIT*KPIFMR
Trigger: CCTCATGAAGATAGGTTTCCATGTGATCCCCACTAT...AGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CCA 90 bp TACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCATTCTGAGTTCCAAATTAAGTTaGGCAGCATTCTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: YPLLLMLYEFQIKLGSILSSKLS*AAFWFL
Trigger: AAGGAACCAGAATGCTGCCCAACTTAATTTGGAACT...CAGAATGCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS CCA 90 bp AGGCGGAAGGCAGGCGGCCTGGCGGGAAGGCGCCTCGGCGCGGGCTaGGGGCGGCTCGCGGTGGGCCAGCAGCAACACGCCCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: RRKAGGLAGRRLGAG*GRLAVGQQQHAPPR
Trigger: GCGAGGAGGGGCGTGTTGCTGCTGGCCCACCGCGAGCCGCCCCCAGCCCGCGCCGAGGCGCCTTCCCGCCAGGCCGCCTGCCTTCCGCCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS CCA 90 bp GGCTCAGGGTGTGGGCCTGGGTCACTGAGGCAGCGCTGTATCCTCTaGGAGCTGGGGCTGTCACTGGGCGCGGGGGTGAAGACATCGTCG +
Preference number: 5 (lower is better)
Translates to: GSGCGPGSLRQRCIL*ELGLSLGAGVKTSS
Trigger: CGACGATGTCTTCACCCCCGCGCCCAGTGACAGCCCCAGCTCCCAGAGGATACAGCGCTGCCTCAGTGACCCAGGCCCACACCCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374089.5
CDS TCA 90 bp AGAACGGTTCTCCCTCCCCAGGCTCAGGGTGTGGGCCTGGGTCACTaGGGCAGCGCTGTATCCTCTGGGAGCTGGGGCTGTCACTGGGCG +
Preference number: 5 (lower is better)
Translates to: RTVLPPQAQGVGLGH*GSAVSSGSWGCHWA
Trigger: CGCCCAGTGACAGCCCCAGCTCCCAGAGGATACAGCGCTGCCTCAGTGACCCAGGCCCACACCCTGAGCCTGGGGAGGGAGAACCGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374089.5
CDS GCA 90 bp CGGCTCGATGACCCGGATGTGGGAGGTAAATCGGGAGGTGAAGGCTaGGATGACCCCGTAGACCACGCCCACAAGCACCCCGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RLDDPDVGGKSGGEG*DDPVDHAHKHPAQG
Trigger: GCCCTGGGCGGGGTGCTTGTGGGCGTGGTCTACGGGGTCATCGCAGCCTTCACCTCCCGATTTACCTCCCACATCCGGGTCATCGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS GCA 90 bp CTGCCTCCGGAGCAGCATCTGGTTCCAGGCTTCCTCGTAGGGGTCTaGCACCAGCGTGTGTCTGTTGTAGGACCGCAGCCGCTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LPPEQHLVPGFLVGV*HQRVSVVGPQPLPG
Trigger: ACCAGGCAGCGGCTGCGGTCCTACAACAGACACACGCTGGTGGCAGACCCCTACGAGGAAGCCTGGAACCAGATGCTGCTCCGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS GCA 90 bp ATGCTGCCGAAGAGCAGGTTGTCCAGGAGGCCGATGTTGTTGATCTaGTCACCGCCCACCAGGCACACGGCGTACATGAGGCCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: MLPKSRLSRRPMLLI*SPPTRHTAYMRPPR
Trigger: CCTGGGCGGCCTCATGTACGCCGTGTGCCTGGTGGGCGGTGAGCAGATCAACAACATCGGCCTCCTGGACAACCTGCTCTTCGGCAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS-3UTR CAA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCACGGCAGAGGGGATCTaGCCCATGCCCCCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLTAEGI*PMPPLS
Trigger: GGAGAGCGGGGGCATGGGCAAGATCCCCTCTGCCGT...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 90 bp GGTGGATGTTCTGCATGGAGACGGTGGAGACGGCAGAGGGGATCTTaGCCATGCCCCCGCTCTCCACCAGCTCGATGGCCTGCTTCATCT +
Preference number: 5 (lower is better)
Translates to: GGCSAWRRWRRQRGS*PCPRSPPARWPASS
Trigger: AGATGAAGCAGGCCATCGAGCTGGTGGAGAGCGGGGGCATGGGCAAGATCCCCTCTGCCGTCTCCACCGTCTCCATGCAGAACATCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CCA 90 bp TTCTTCACAGCCAACAGGTCTACCAGGGGCCGAATGGTCATGCCCTaGGGGGCAGGCAGGTGTCAGGCACTCCAGTTCTGCTACCCAGGC +
Preference number: 5 (lower is better)
Translates to: FFTANRSTRGRMVMP*GAGRCQALQFCYPG
Trigger: GCCTGGGTAGCAGAACTGGAGTGCCTGACACCTGCCTGCCCCCCAGGGCATGACCATTCGGCCCCTGGTAGACCTGTTGGCTGTGAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS-3UTR CAA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTCGGATCTCCTCCTCCTaGTCCTTGGACAGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: QPAALSKDRLGGGQGDRARISSS*SLDSAG
Trigger: GCCAGCACTGTCCAAGGACAAGGAGGAGGAGATCCG...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS TCA 90 bp TGGAGCGGTGGTGACATCCCCAATCGAGCGTTCTCGTGGTGGCTCTaGGCTTCGAATGGTGCTGGCAGTTGGGCTGAGCTGGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: WSGGDIPNRAFSWWL*ASNGAGSWAELEAM
Trigger: CATGGCCTCCAGCTCAGCCCAACTGCCAGCACCATTCGAAGCTCAGAGCCACCACGAGAACGCTCGATTGGGGATGTCACCACCGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS TCA 90 bp CATTTCAAATCACACGCTTTCCTCTCTTTCCACGGGAACAGCCTGTaGGGGTCCCCAAGGCAAGGGCCTGCCCTGCCCTGGCCCAGCACC +
Preference number: 5 (lower is better)
Translates to: HFKSHAFLSFHGNSL*GSPRQGPALPWPST
Trigger: GGTGCTGGGCCAGGGCAGGGCAGGCCCTTGCCTTGGGGACCCTCACAGGCTGTTCCCGTGGAAAGAGAGGAAAGCGTGTGATTTGAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS TCA 90 bp GGCCTGCTTCTTCCTGGAGACACGGTCAGAGGTTTCACTGCCAAATaGCCCCCACACTGGTCATCTGGCCTGGGCCAGGCAGCAGACAGC +
Preference number: 5 (lower is better)
Translates to: GLLLPGDTVRGFTAK*PPHWSSGLGQAADS
Trigger: GCTGTCTGCTGCCTGGCCCAGGCCAGATGACCAGTGTGGGGGTCATTTGGCAGTGAAACCTCTGACCGTGTCTCCAGGAAGAAGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS TCA 90 bp TGGCCACAGATGTCTTCGATGCCTGTCAGAAGGTGGTCCAGGAACTaGAAGGGGCCCAGGGCCAAGTCAAGCCTCGCTGTGGGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: WPQMSSMPVRRWSRN*KGPRAKSSLAVGRL
Trigger: AAGGCGCCCCACAGCGAGGCTTGACTTGGCCCTGGGCCCCTTTCAGTTCCTGGACCACCTTCTGACAGGCATCGAAGACATCTGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447808.1
CDS GCA 90 bp TGTTCTGCATGGAGACGGTGGAGACGGCAGAGGGGATCTTGCCCATaGCCCCGCTCTCCACCAGCTCGATGGCCTGCTTCATCTCCATCT +
Preference number: 5 (lower is better)
Translates to: CSAWRRWRRQRGSCP*PRSPPARWPASSPS
Trigger: AGATGGAGATGAAGCAGGCCATCGAGCTGGTGGAGAGCGGGGGCATGGGCAAGATCCCCTCTGCCGTCTCCACCGTCTCCATGCAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CCA 90 bp TCTGAGCTTCGAATGGTGCTGGCAGTTGGGCTGAGCTGGAGGCCATaGCTCCTGAGAACAGGCAGCAGCCCCACCAAAGCAACCACCACG +
Preference number: 5 (lower is better)
Translates to: SELRMVLAVGLSWRP*LLRTGSSPTKATTT
Trigger: CGTGGTGGTTGCTTTGGTGGGGCTGCTGCCTGTTCTCAGGAGCCATGGCCTCCAGCTCAGCCCAACTGCCAGCACCATTCGAAGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS CCA 90 bp AGTGACGGAATGATTAACAGGGCGGCTCTCTGGGGTGACCTCCGGTaGAGCGGTGGTGACATCCCCAATCGAGCGTTCTCGTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SDGMINRAALWGDLR*SGGDIPNRAFSWWL
Trigger: GAGCCACCACGAGAACGCTCGATTGGGGATGTCACCACCGCTCCACCGGAGGTCACCCCAGAGAGCCGCCCTGTTAATCATTCCGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS-3UTR CAA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCTCCAGGAGGCCGATGTaGTTGATCTGCTCACCGCCC +
Preference number: 5 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGSRRPM*LICSPP
Trigger: GGGCGGTGAGCAGATCAACAACATCGGCCTCCTGGA...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCATGAGCTGGGGCTCCTaGGAGCGCTCGCCAGCTATC +
Preference number: 5 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFMSWGS*ERSPAI
Trigger: GATAGCTGGCGAGCGCTCCAAGGAGCCCCAGCTCAT...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTCCTGGTACCCCTGGTTaGTCCCCTGATAAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAPGTPG*SPDKAG
Trigger: CCCTGCTTTATCAGGGGACAAACCAGGGGTACCAGG...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCCTGAGTAAGGACAGGTaGGGTGGTGGCCAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGLSKDR*GGGQGD
Trigger: GTCACCCTGGCCACCACCCAACCTGTCCTTACTCAG...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS TCA 90 bp GACTTTGCCCTTCAGCTCTTCATTCACCAGGTCCACAGACTCGGGTaGCTGCGGGGAAGCCGGGTCGATGGTGATGACAGGCAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: DFALQLFIHQVHRLG*LRGSRVDGDDRQVL
Trigger: GAGGACCTGCCTGTCATCACCATCGACCCGGCTTCCCCGCAGTCACCCGAGTCTGTGGACCTGGTGAATGAAGAGCTGAAGGGCAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS GCA 90 bp TTGCCCTTCAGCTCTTCATTCACCAGGTCCACAGACTCGGGTGACTaGGGGGAAGCCGGGTCGATGGTGATGACAGGCAGGTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LPFSSSFTRSTDSGD*GEAGSMVMTGRSSF
Trigger: GAAGGAGGACCTGCCTGTCATCACCATCGACCCGGCTTCCCCGCAGTCACCCGAGTCTGTGGACCTGGTGAATGAAGAGCTGAAGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS-3UTR CAA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGGGAGCGCTTCGTCTCTaGCTTTTTCTTCACAGCCAA +
Preference number: 5 (lower is better)
Translates to: GGASEALVQVREKPGSREGALRL*LFLHSQ
Trigger: TTGGCTGTGAAGAAAAAGCAAGAGACGAAGCGCTCC...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGGGGACGAAGTCTCCTaGCTCCGCATCATGATGCCC +
Preference number: 5 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLGDEVS*LRIMMP
Trigger: GGGCATCATGATGCGGAGCAAGGAGACTTCGTCCCC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGAGGAGTGTGAGACCTaGGTGGGTCAGCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLEECET*VGQQSL
Trigger: GAGGGACTGCTGACCCACCAAGGTCTCACACTCCTC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 90 bp TCCTTAAGGCCTGCTTCTTCCTGGAGACACGGTCAGAGGTTTCACTaGCAAATGACCCCCACACTGGTCATCTGGCCTGGGCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SLRPASSWRHGQRFH*QMTPTLVIWPGPGS
Trigger: GCTGCCTGGCCCAGGCCAGATGACCAGTGTGGGGGTCATTTGGCAGTGAAACCTCTGACCGTGTCTCCAGGAAGAAGCAGGCCTTAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS GCA 90 bp TGTCCTTCCAGTGGTGGTGACCGTAGTGGCCACAGATGTCTTCGATaGCTGTCAGAAGGTGGTCCAGGAACTGAAAGGGGCCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: CPSSGGDRSGHRCLR*LSEGGPGTERGPGP
Trigger: TGGCCCTGGGCCCCTTTCAGTTCCTGGACCACCTTCTGACAGGCATCGAAGACATCTGTGGCCACTACGGTCACCACCACTGGAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447808.1
CDS CCA 90 bp CTTCATGCCATGATCAGTGACGGAATGATTAACAGGGCGGCTCTCTaGGGTGACCTCCGGTGGAGCGGTGGTGACATCCCCAATCGAGCG +
Preference number: 5 (lower is better)
Translates to: LHAMISDGMINRAAL*GDLRWSGGDIPNRA
Trigger: CGCTCGATTGGGGATGTCACCACCGCTCCACCGGAGGTCACCCCAGAGAGCCGCCCTGTTAATCATTCCGTCACTGATCATGGCATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS CCA 90 bp GATCTCGAAGGGGGTGCGCACGTGTGTGTAGTCGATGCCCAGGACTaGAAAGGCCTTGCGCGGCTTCATGCCATGATCAGTGACGGAATG +
Preference number: 5 (lower is better)
Translates to: DLEGGAHVCVVDAQD*KGLARLHAMISDGM
Trigger: CATTCCGTCACTGATCATGGCATGAAGCCGCGCAAGGCCTTTCCAGTCCTGGGCATCGACTACACACACGTGCGCACCCCCTTCGAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS CCA 90 bp CCTCAGGATTTTGCGGATCTCCTCCTCCTTGTCCTTGGACAGTGCTaGCAGGATGCGCTCGGAAGGCAGGGACTTGGGGTGGATGTTCTG +
Preference number: 5 (lower is better)
Translates to: PQDFADLLLLVLGQC*QDALGRQGLGVDVL
Trigger: CAGAACATCCACCCCAAGTCCCTGCCTTCCGAGCGCATCCTGCCAGCACTGTCCAAGGACAAGGAGGAGGAGATCCGCAAAATCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS-3UTR CAA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTACAGTGACGGCGTCATaGAGCAAGGACTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: QPAALSKDRLGGGQGDRATVTAS*SKDSPK
Trigger: TTTTGGGGAGTCCTTGCTCAATGACGCCGTCACTGT...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCTCGGAAGGCAGGGACTaGGGGTGGATGTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLSEGRD*GWMFCM
Trigger: CATGCAGAACATCCACCCCAAGTCCCTGCCTTCCGA...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS TCA 90 bp GGAAAGGAAGAAGGAAGGCTGGGACCTTTGGCTGAGGAAAGTGACTaGGGAGCTGGGACTCTGGGCTGTGGGCTAAAGGAAGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: GKEEGRLGPLAEESD*GAGTLGCGLKEGVG
Trigger: CCCTACCCCTTCCTTTAGCCCACAGCCCAGAGTCCCAGCTCCTCAGTCACTTTCCTCAGCCAAAGGTCCCAGCCTTCCTTCTTCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 90 bp GTTCCTCAGGATTTTGCGGATCTCCTCCTCCTTGTCCTTGGACAGTaGTGGCAGGATGCGCTCGGAAGGCAGGGACTTGGGGTGGATGTT +
Preference number: 5 (lower is better)
Translates to: VPQDFADLLLLVLGQ*WQDALGRQGLGVDV
Trigger: AACATCCACCCCAAGTCCCTGCCTTCCGAGCGCATCCTGCCAGCACTGTCCAAGGACAAGGAGGAGGAGATCCGCAAAATCCTGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS-3UTR CAA 90 bp TTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCAGCTCCCTCCCTTCGGAGGGAGGCTGGGTTaGCAATCTGGAACTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LSPDKAGPTQGRPQLPPFGGRLG*QSGTPK
Trigger: CTTTGGAGTTCCAGATTGCAAACCCAGCCTCCCTCC...GAAGGGAGGGAGCTGAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp GGAGGAGCCTCCGAGGCCCTAGTCCAGGTCCGGGAGAAGCCTGGATCTAGGGAGATCTTCAGGAAGTATTaGATGGTGGTGTGGGACTTG +
Preference number: 5 (lower is better)
Translates to: GGASEALVQVREKPGSREIFRKY*MVVWDL
Trigger: CAAGTCCCACACCACCATCAAATACTTCCTGAAGAT...CTCCCTAGATCCAGGCTTCTCCCGGACCTGGACTAGGGCCTCGGAGGCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTTTGTTCCTCAGGATTTaGCGGATCTCCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QPAALSKDRLGGGQGDRALFLRI*RISSSL
Trigger: CAAGGAGGAGGAGATCCGCAAAATCCTGAGGAACAA...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 90 bp CCTCCTCAGCCACCTTTGCAGGATCCCGGCTCAACCCTAAGACTTTaGCCTTCAGCTCTTCATTCACCAGGTCCACAGACTCGGGTGACT +
Preference number: 5 (lower is better)
Translates to: PPQPPLQDPGSTLRL*PSALHSPGPQTRVT
Trigger: AGTCACCCGAGTCTGTGGACCTGGTGAATGAAGAGCTGAAGGGCAAAGTCTTAGGGTTGAGCCGGGATCCTGCAAAGGTGGCTGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS GCA 90 bp TCCGATGTGGAGAGAGGCCACAGATGCCAGACCGCAGAACCATGGTaGTGCTTCCAGAGCCAGCCTCGACAAAACGATTTCACGTCCACA +
Preference number: 5 (lower is better)
Translates to: SDVERGHRCQTAEPW*CFQSQPRQNDFTST
Trigger: TGTGGACGTGAAATCGTTTTGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTCCACATCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS CCA 90 bp AGATCCGATGTGGAGAGAGGCCACAGATGCCAGACCGCAGAACCATaGTGCTGCTTCCAGAGCCAGCCTCGACCTTACCCAAATGAGAGT +
Preference number: 5 (lower is better)
Translates to: RSDVERGHRCQTAEP*CCFQSQPRPYPNES
Trigger: ACTCTCATTTGGGTAAGGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTCCACATCGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CCA 90 bp AGATCCGATGTGGAGAGAGGCCACAGATGCCAGACCGCAGAACCATaGTGCTGCTTCCAGAGCCAGCCTCGACAAAACGATTTCACGTCC +
Preference number: 5 (lower is better)
Translates to: RSDVERGHRCQTAEP*CCFQSQPRQNDFTS
Trigger: GGACGTGAAATCGTTTTGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTCCACATCGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS-3UTR CAA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCACGATACGGAACTTGTaGATGAACCAGGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLTIRNL*MNQVRP
Trigger: GGGCCTGACCTGGTTCATCAACAAGTTCCGTATCGT...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp CAGCCCGCAGCTCTGAGTAAGGACAGGTTGGGTGGTGGCCAGGGTGACAGAGCTTTCACGATACGGAACTaGTTGATGAACCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: QPAALSKDRLGGGQGDRAFTIRN*LMNQVR
Trigger: CCTGACCTGGTTCATCAACAAGTTCCGTATCGTGAA...AGCTCTGTCACCCTGGCCACCACCCAACCTGTCCTTACTCAGAGCTGCGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp CTGGTACCCCTGGTTTGTCCCCTGATAAAGCAGGGCCTACTCAAGGGAGGCCTCGTGTGGATCTCTTCGTaGATGGAGCGCTTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: LVPLVCPLIKQGLLKGGLVWISS*MERFVS
Trigger: AGAGACGAAGCGCTCCATCAACGAAGAGATCCACAC...GAGGCCTCCCTTGAGTAGGCCCTGCTTTATCAGGGGACAAACCAGGGGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 90 bp GATGTGGAGAGAGGCCACAGATGCCAGACCGCAGAACCATGGTGCTaGTTCCAGAGCCAGCCTCGACCTTACCCAAATGAGAGTAAAACC +
Preference number: 5 (lower is better)
Translates to: DVERGHRCQTAEPWC*FQSQPRPYPNESKT
Trigger: GGTTTTACTCTCATTTGGGTAAGGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS GCA 90 bp TCCGATGTGGAGAGAGGCCACAGATGCCAGACCGCAGAACCATGGTaGTGCTTCCAGAGCCAGCCTCGACCTTACCCAAATGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: SDVERGHRCQTAEPW*CFQSQPRPYPNESK
Trigger: TTTACTCTCATTTGGGTAAGGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTCCACATCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS-3UTR CAA 90 bp CACAAGGGAAAGGTTCCAGGGGCCAAACCCAGGGTGGGGGAAGTAAGAGCAGGCCTCAACCCTAAGACTTaGCCCTTCAGCTCTTCATTC +
Preference number: 5 (lower is better)
Translates to: HKGKVPGAKPRVGEVRAGLNPKT*PFSSSF
Trigger: GAATGAAGAGCTGAAGGGCAAAGTCTTAGGGTTGAG...GCCTGCTCTTACTTCCCCCACCCTGGGTTTGGCCCCTGGAACCTTTCCCTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 90 bp GGGCCACCACGAAGAAGCTCAGGAAGCCGAGGAAGATGTCCACGATaGCCACGTGTTCGTAGTTGGCAAACTCCTCAAAGAGGTGATACA +
Preference number: 5 (lower is better)
Translates to: GPPRRSSGSRGRCPR*PRVRSWQTPQRGDT
Trigger: TGTATCACCTCTTTGAGGAGTTTGCCAACTACGAACACGTGGGCATCGTGGACATCTTCCTCGGCTTCCTGAGCTTCTTCGTGGTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS-3UTR CAA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAGGAGGCCGATGTTGTaGATCTGCTCACCGCCCACC +
Preference number: 5 (lower is better)
Translates to: GGTTAEPETLWLETKIGLRRPML*ICSPPT
Trigger: GGTGGGCGGTGAGCAGATCAACAACATCGGCCTCCT...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGTCCTCCTCCTTGTCCTaGGACAGTGCTGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: GGTTAEPETLWLETKIGLSSSLS*DSAGRM
Trigger: CATCCTGCCAGCACTGTCCAAGGACAAGGAGGAGGA...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATGTGGGTGAGTCCAGCTaGTGGGCTGGCACCGTCAGG +
Preference number: 5 (lower is better)
Translates to: EPETLWLETKIGLNEEEDVGESS*WAGTVR
Trigger: CCTGACGGTGCCAGCCCACAAGCTGGACTCACCCAC...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 90 bp AGGAACTGTGTGTGGATCTCTTCGTTGATGGAGCGCTTCGTCTCTTaGTTTTTCTTCACAGCCAACAGGTCTACCAGGGGCCGAATGGTC +
Preference number: 5 (lower is better)
Translates to: RNCVWISSLMERFVS*FFFTANRSTRGRMV
Trigger: GACCATTCGGCCCCTGGTAGACCTGTTGGCTGTGAAGAAAAAGCAAGAGACGAAGCGCTCCATCAACGAAGAGATCCACACACAGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374089.5
CDS CCA 90 bp TCCCAGCACTTATCTAAAGACAGGTCCTTAAGGCCTGCTTCTTCCTaGAGACACGGTCAGAGGTTTCACTGCCAAATGACCCCCACACTG +
Preference number: 5 (lower is better)
Translates to: SQHLSKDRSLRPASS*RHGQRFHCQMTPTL
Trigger: CAGTGTGGGGGTCATTTGGCAGTGAAACCTCTGACCGTGTCTCCAGGAAGAAGCAGGCCTTAAGGACCTGTCTTTAGATAAGTGCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS-3UTR CAA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATCCTCCTCAGCCACCTTaGCAGGATCCCGGCTCAACC +
Preference number: 5 (lower is better)
Translates to: EPETLWLETKIGLNEEEDPPQPP*QDPGST
Trigger: GGTTGAGCCGGGATCCTGCAAAGGTGGCTGAGGAGG...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 90 bp CCATCCATTTCTGACCACCTCCATTGCCCACTCTGGTCCAAGCAGTaGCATTTTCCCCACCCAGATTATTGTTTCAACAAAGCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: PSISDHLHCPLWSKQ*HFPHPDYCFNKAAR
Trigger: TCTGGCTGCTTTGTTGAAACAATAATCTGGGTGGGGAAAATGGCACTGCTTGGACCAGAGTGGGCAATGGAGGTGGTCAGAAATGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS-3UTR CAA 90 bp CCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCACAGTGACGGCGTCATaGAGCAAGGACTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: PGQYPLLLMLYEFQIKLGTVTAS*SKDSPK
Trigger: TTTTGGGGAGTCCTTGCTCAATGACGCCGTCACTGT...GCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CAA 90 bp GGTGGGACCACAGCTGAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGATGATGAACTGGTCCTaGGGGGTCAGCTTCACGATA +
Preference number: 5 (lower is better)
Translates to: GGTTAEPETLWLETKIGLMMNWS*GVSFTI
Trigger: TATCGTGAAGCTGACCCCCAAGGACCAGTTCATCAT...CAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTCAGCTGTGGTCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATTGGTGTTACTGCCCCTaGGGGAAGAACGGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: EPETLWLETKIGLNEEEDWCYCP*GKNGSP
Trigger: GGGAGAACCGTTCTTCCCCAAGGGGCAGTAACACCA...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp TTCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCAGGAGGCCGATGTTGTaGATCTGCTCACCGCCCACC +
Preference number: 5 (lower is better)
Translates to: FQIKLGSILVPLHSDQSLRRPML*ICSPPT
Trigger: GGTGGGCGGTGAGCAGATCAACAACATCGGCCTCCT...GAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CAA 90 bp ACCGTGCCCGGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGATGATGAACTGGTCCTaGGGGGTCAGCTTCACGATA +
Preference number: 5 (lower is better)
Translates to: TVPGQYPLLLMLYEFQIKMMNWS*GVSFTI
Trigger: TATCGTGAAGCTGACCCCCAAGGACCAGTTCATCAT...CTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCCGGGCACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS CCA 90 bp TATTTCCAGAATCCATCCATTTCTGACCACCTCCATTGCCCACTCTaGTCCAAGCAGTGCCATTTTCCCCACCCAGATTATTGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: YFQNPSISDHLHCPL*SKQCHFPHPDYCFN
Trigger: GTTGAAACAATAATCTGGGTGGGGAAAATGGCACTGCTTGGACCAGAGTGGGCAATGGAGGTGGTCAGAAATGGATGGATTCTGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS-3UTR CAA 90 bp TCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGGAGGGAGGCTGGGTTaGCAATCTGGAACTCCAAAG +
Preference number: 5 (lower is better)
Translates to: SKLSWAAFWFLYILISHSGGRLG*QSGTPK
Trigger: CTTTGGAGTTCCAGATTGCAAACCCAGCCTCCCTCC...AGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CAA 90 bp GGCCAGTACCCACTTCTCTTAATGCTCTATGAGTTCCAAATTAAGTTGGGCAGCATCTTCAGGAAGTATTaGATGGTGGTGTGGGACTTG +
Preference number: 5 (lower is better)
Translates to: GQYPLLLMLYEFQIKLGSIFRKY*MVVWDL
Trigger: CAAGTCCCACACCACCATCAAATACTTCCTGAAGAT...GCTGCCCAACTTAATTTGGAACTCATAGAGCATTAAGAGAAGTGGGTACTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CAA 90 bp AAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAACGATACGGAACTTGTaGATGAACCAGGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KLSWAAFWFLYILISHSATIRNL*MNQVRP
Trigger: GGGCCTGACCTGGTTCATCAACAAGTTCCGTATCGT...TGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CAA 90 bp GAGCCAGAGACTCTTTGGTTAGAAACTAAGATTGGTCTGAATGAGGAGGAGGATTTCTTATTAAACCGGTaGAGCTTGTCCTTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: EPETLWLETKIGLNEEEDFLLNR*SLSFQW
Trigger: CCACTGGAAGGACAAGCTCAACCGGTTTAATAAGAA...ATCCTCCTCCTCATTCAGACCAATCTTAGTTTCTAACCAAAGAGTCTCTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS-3UTR CAA 90 bp TCCAAATTAAGTTGGGCAGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTTTCACGATACGGAACTaGTTGATGAACCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SKLSWAAFWFLYILISHSFTIRN*LMNQVR
Trigger: CCTGACCTGGTTCATCAACAAGTTCCGTATCGTGAA...AGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCTGCCCAACTTAATTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS-3UTR CAA 90 bp AGCATTCTGGTTCCTTTACATTCTGATCAGTCACTCTGCAATGACTCATCACAAGAGTTCCAAATTAAGTaGGGCAGCATTCTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SILVPLHSDQSLCNDSSQEFQIK*GSILVP
Trigger: AGGAACCAGAATGCTGCCCAACTTAATTTGGAACTC...TTGTGATGAGTCATTGCAGAGTGACTGATCAGAATGTAAAGGAACCAGAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374086.3
CDS CCA 72 bp TCCGGGGAAATGGAAAGAGGCGGAAGGCAGGCGGCCTaGCGGGAAGGCGCCTCGGCGCGGGCTGGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: SGEMERGGRQAA*REGASARAGGG
Trigger: GCCGCCCCCAGCCCGCGCCGAGGCGCCTTCCCGCCAGGCCGCCTGCCTTCCGCCTCTTTCCATTTCCCCGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 72 bp GCCCTGGCGCGACGCGGCGCTCCGCCCCGGCCCAGCTaGAGCTCCTCCTGGTCCAGCTCCAGAACTAACCCT +
Preference number: 6 (lower is better)
Translates to: ALARRGAPPRPS*SSSWSSSRTNP
Trigger: AGGGTTAGTTCTGGAGCTGGACCAGGAGGAGCTGCAGCTGGGCCGGGGCGGAGCGCCGCGTCGCGCCAGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS CCA 72 bp AGGCCAGTGGGTCTGAGCCGATGCGGGCCCGAGACATaGTGGGTGAGTCCAGCTTGTGGGCTGGCACCGTCA +
Preference number: 6 (lower is better)
Translates to: RPVGLSRCGPET*WVSPACGLAPS
Trigger: TGACGGTGCCAGCCCACAAGCTGGACTCACCCACCATGTCTCGGGCCCGCATCGGCTCAGACCCACTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS GCA 72 bp TGGAGACGGTGGAGACGGCAGAGGGGATCTTGCCCATaGCCCCGCTCTCCACCAGCTCGATGGCCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: WRRWRRQRGSCP*PRSPPARWPAS
Trigger: TGAAGCAGGCCATCGAGCTGGTGGAGAGCGGGGGCATGGGCAAGATCCCCTCTGCCGTCTCCACCGTCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS GCA 72 bp TCTGCATGGAGACGGTGGAGACGGCAGAGGGGATCTTaGCCATGCCCCCGCTCTCCACCAGCTCGATGGCCT +
Preference number: 6 (lower is better)
Translates to: SAWRRWRRQRGS*PCPRSPPARWP
Trigger: AGGCCATCGAGCTGGTGGAGAGCGGGGGCATGGGCAAGATCCCCTCTGCCGTCTCCACCGTCTCCATGCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CCA 72 bp GCCAACAGGTCTACCAGGGGCCGAATGGTCATGCCCTaGGGGGCAGGCAGGTGTCAGGCACTCCAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: ANRSTRGRMVMP*GAGRCQALQFC
Trigger: GCAGAACTGGAGTGCCTGACACCTGCCTGCCCCCCAGGGCATGACCATTCGGCCCCTGGTAGACCTGTTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS CAA 72 bp TTCTGCATGGAGACGGTGGAGACGGCAGAGGGGATCTaGCCCATGCCCCCGCTCTCCACCAGCTCGATGGCC +
Preference number: 6 (lower is better)
Translates to: FCMETVETAEGI*PMPPLSTSSMA
Trigger: GGCCATCGAGCTGGTGGAGAGCGGGGGCATGGGCAAGATCCCCTCTGCCGTCTCCACCGTCTCCATGCAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS GCA 72 bp GACCCGGATGTGGGAGGTAAATCGGGAGGTGAAGGCTaGGATGACCCCGTAGACCACGCCCACAAGCACCCC +
Preference number: 6 (lower is better)
Translates to: DPDVGGKSGGEG*DDPVDHAHKHP
Trigger: GGGGTGCTTGTGGGCGTGGTCTACGGGGTCATCGCAGCCTTCACCTCCCGATTTACCTCCCACATCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CCA 72 bp AGCAGGGTGCTGATGACGAAGGTCCAGTTCCAGTGGTaGGAGCCGGCCACCGTGGAGACGCCGAGGAAGATG +
Preference number: 6 (lower is better)
Translates to: SRVLMTKVQFQW*EPATVETPRKM
Trigger: CATCTTCCTCGGCGTCTCCACGGTGGCCGGCTCCCACCACTGGAACTGGACCTTCGTCATCAGCACCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CCA 72 bp AAGAGCAGGGTGCTGATGACGAAGGTCCAGTTCCAGTaGTGGGAGCCGGCCACCGTGGAGACGCCGAGGAAG +
Preference number: 6 (lower is better)
Translates to: KSRVLMTKVQFQ*WEPATVETPRK
Trigger: CTTCCTCGGCGTCTCCACGGTGGCCGGCTCCCACCACTGGAACTGGACCTTCGTCATCAGCACCCTGCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CAA 90 bp GGGTGGATGTTCTGCATGGAGACGGTGGAGACGGCAGAGGGGATCTaGCCCATGCCCCCGCTCTCCACCAGCTCGATGGCCTGCTTCATC +
Preference number: 6 (lower is better)
Translates to: GWMFCMETVETAEGI*PMPPLSTSSMACFI
Trigger: GATGAAGCAGGCCATCGAGCTGGTGGAGAGCGGGGGCATGGGCAAGATCCCCTCTGCCGTCTCCACCGTCTCCATGCAGAACATCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS GCA 72 bp GAGCAGCATCTGGTTCCAGGCTTCCTCGTAGGGGTCTaGCACCAGCGTGTGTCTGTTGTAGGACCGCAGCCG +
Preference number: 6 (lower is better)
Translates to: EQHLVPGFLVGV*HQRVSVVGPQP
Trigger: CGGCTGCGGTCCTACAACAGACACACGCTGGTGGCAGACCCCTACGAGGAAGCCTGGAACCAGATGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CCA 72 bp ACAGTGCTGGCAGGATGCGCTCGGAAGGCAGGGACTTaGGGTGGATGTTCTGCATGGAGACGGTGGAGACGG +
Preference number: 6 (lower is better)
Translates to: TVLAGCARKAGT*GGCSAWRRWRR
Trigger: CCGTCTCCACCGTCTCCATGCAGAACATCCACCCCAAGTCCCTGCCTTCCGAGCGCATCCTGCCAGCACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CAA 72 bp ATGCTGCCGAAGAGCAGGTTGTCCAGGAGGCCGATGTaGTTGATCTGCTCACCGCCCACCAGGCACACGGCG +
Preference number: 6 (lower is better)
Translates to: MLPKSRLSRRPM*LICSPPTRHTA
Trigger: CGCCGTGTGCCTGGTGGGCGGTGAGCAGATCAACAACATCGGCCTCCTGGACAACCTGCTCTTCGGCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CAA 72 bp GACAGTGCTGGCAGGATGCGCTCGGAAGGCAGGGACTaGGGGTGGATGTTCTGCATGGAGACGGTGGAGACG +
Preference number: 6 (lower is better)
Translates to: DSAGRMRSEGRD*GWMFCMETVET
Trigger: CGTCTCCACCGTCTCCATGCAGAACATCCACCCCAAGTCCCTGCCTTCCGAGCGCATCCTGCCAGCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CAA 90 bp GAGATGATGCTGCCGAAGAGCAGGTTGTCCAGGAGGCCGATGTTGTaGATCTGCTCACCGCCCACCAGGCACACGGCGTACATGAGGCCG +
Preference number: 6 (lower is better)
Translates to: EMMLPKSRLSRRPML*ICSPPTRHTAYMRP
Trigger: CGGCCTCATGTACGCCGTGTGCCTGGTGGGCGGTGAGCAGATCAACAACATCGGCCTCCTGGACAACCTGCTCTTCGGCAGCATCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CAA 90 bp GCCGAGATGATGCTGCCGAAGAGCAGGTTGTCCAGGAGGCCGATGTaGTTGATCTGCTCACCGCCCACCAGGCACACGGCGTACATGAGG +
Preference number: 6 (lower is better)
Translates to: AEMMLPKSRLSRRPM*LICSPPTRHTAYMR
Trigger: CCTCATGTACGCCGTGTGCCTGGTGGGCGGTGAGCAGATCAACAACATCGGCCTCCTGGACAACCTGCTCTTCGGCAGCATCATCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CAA 90 bp GCGATGATGAACTGGTCCTTGGGGGTCAGCTTCACGATACGGAACTaGTTGATGAACCAGGTCAGGCCCAGCACCCCCAGCACGCGGGCG +
Preference number: 6 (lower is better)
Translates to: AMMNWSLGVSFTIRN*LMNQVRPSTPSTRA
Trigger: CGCCCGCGTGCTGGGGGTGCTGGGCCTGACCTGGTTCATCAACAAGTTCCGTATCGTGAAGCTGACCCCCAAGGACCAGTTCATCATCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS TCA 72 bp TGCCGAAGAGCAGGTTGTCCAGGAGGCCGATGTTGTTaGTCTGCTCACCGCCCACCAGGCACACGGCGTACA +
Preference number: 6 (lower is better)
Translates to: CRRAGCPGGRCC*SAHRPPGTRRT
Trigger: TGTACGCCGTGTGCCTGGTGGGCGGTGAGCAGATCAACAACATCGGCCTCCTGGACAACCTGCTCTTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS GCA 72 bp AGATCTCGAAGGGGGTGCGCACGTGTGTGTAGTCGATaGCCAGGACTGGAAAGGCCTTGCGCGGCTTCATGC +
Preference number: 6 (lower is better)
Translates to: RSRRGCARVCSR*PGLERPCAASC
Trigger: GCATGAAGCCGCGCAAGGCCTTTCCAGTCCTGGGCATCGACTACACACACGTGCGCACCCCCTTCGAGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS CCA 72 bp CACGAAAGGAGACCAAAAGGTCTGGAACTCCGGGCCTaGGAAGGGGGAGGACGGATGTGGGAAACTGAGCCC +
Preference number: 6 (lower is better)
Translates to: HERRPKGLELRA*EGGGRMWETEP
Trigger: GGGCTCAGTTTCCCACATCCGTCCTCCCCCTTCCCAGGCCCGGAGTTCCAGACCTTTTGGTCTCCTTTCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS CCA 72 bp GACCCAGGAACGACCACGAAAGGAGACCAAAAGGTCTaGAACTCCGGGCCTGGGAAGGGGGAGGACGGATGT +
Preference number: 6 (lower is better)
Translates to: DPGTTTKGDQKV*NSGPGKGEDGC
Trigger: ACATCCGTCCTCCCCCTTCCCAGGCCCGGAGTTCCAGACCTTTTGGTCTCCTTTCGTGGTCGTTCCTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS CCA 72 bp GTGGAGAGAGGCCACAGATGCCAGACCGCAGAACCATaGTGCTGCTTCCAGAGCCAGCCTCGACCTTACCCA +
Preference number: 6 (lower is better)
Translates to: VERGHRCQTAEP*CCFQSQPRPYP
Trigger: TGGGTAAGGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CCA 72 bp ATGATTAACAGGGCGGCTCTCTGGGGTGACCTCCGGTaGAGCGGTGGTGACATCCCCAATCGAGCGTTCTCG +
Preference number: 6 (lower is better)
Translates to: MINRAALWGDLR*SGGDIPNRAFS
Trigger: CGAGAACGCTCGATTGGGGATGTCACCACCGCTCCACCGGAGGTCACCCCAGAGAGCCGCCCTGTTAATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS CCA 72 bp GGGGGTGCGCACGTGTGTGTAGTCGATGCCCAGGACTaGAAAGGCCTTGCGCGGCTTCATGCCATGATCAGT +
Preference number: 6 (lower is better)
Translates to: GGAHVCVVDAQD*KGLARLHAMIS
Trigger: ACTGATCATGGCATGAAGCCGCGCAAGGCCTTTCCAGTCCTGGGCATCGACTACACACACGTGCGCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS CAA 72 bp TGCCCCCATCGTCGTCCTCGTCCTCCTCAGCCACCTTaGCAGGATCCCGGCTCAACCCTAAGACTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: CPHRRPRPPQPP*QDPGSTLRLCP
Trigger: AGGGCAAAGTCTTAGGGTTGAGCCGGGATCCTGCAAAGGTGGCTGAGGAGGACGAGGACGACGATGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS TCA 72 bp GGTGACATCCCCAATCGAGCGTTCTCGTGGTGGCTCTaGGCTTCGAATGGTGCTGGCAGTTGGGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: GDIPNRAFSWWL*ASNGAGSWAEL
Trigger: CAGCTCAGCCCAACTGCCAGCACCATTCGAAGCTCAGAGCCACCACGAGAACGCTCGATTGGGGATGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS GCA 72 bp AAGAGCAGGTTGTCCAGGAGGCCGATGTTGTTGATCTaGTCACCGCCCACCAGGCACACGGCGTACATGAGG +
Preference number: 6 (lower is better)
Translates to: KSRLSRRPMLLI*SPPTRHTAYMR
Trigger: CCTCATGTACGCCGTGTGCCTGGTGGGCGGTGAGCAGATCAACAACATCGGCCTCCTGGACAACCTGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS GCA 72 bp GATTTTGCGGATCTCCTCCTCCTTGTCCTTGGACAGTaGTGGCAGGATGCGCTCGGAAGGCAGGGACTTGGG +
Preference number: 6 (lower is better)
Translates to: DFADLLLLVLGQ*WQDALGRQGLG
Trigger: CCCAAGTCCCTGCCTTCCGAGCGCATCCTGCCAGCACTGTCCAAGGACAAGGAGGAGGAGATCCGCAAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS GCA 72 bp GGCCAGGCAGCAGACAGCCTGGGTTCAGATGTGGACTaGACCACAGACTTGCTCTGCAACCCCATGGAAGTC +
Preference number: 6 (lower is better)
Translates to: GQAADSLGSDVD*TTDLLCNPMEV
Trigger: GACTTCCATGGGGTTGCAGAGCAAGTCTGTGGTGCAGTCCACATCTGAACCCAGGCTGTCTGCTGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS CCA 72 bp ATGATCAGTGACGGAATGATTAACAGGGCGGCTCTCTaGGGTGACCTCCGGTGGAGCGGTGGTGACATCCCC +
Preference number: 6 (lower is better)
Translates to: MISDGMINRAAL*GDLRWSGGDIP
Trigger: GGGGATGTCACCACCGCTCCACCGGAGGTCACCCCAGAGAGCCGCCCTGTTAATCATTCCGTCACTGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374084.2
ENST00000374086.3
CDS CCA 72 bp TCCTCAGGATTTTGCGGATCTCCTCCTCCTTGTCCTTaGACAGTGCTGGCAGGATGCGCTCGGAAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: SSGFCGSPPPCP*TVLAGCARKAG
Trigger: CCCTGCCTTCCGAGCGCATCCTGCCAGCACTGTCCAAGGACAAGGAGGAGGAGATCCGCAAAATCCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CAA 72 bp GTGAAGACATCGTCGGTTCCTGGGGACGAAGTCTCCTaGCTCCGCATCATGATGCCCCCATCGTCGTCCTCG +
Preference number: 6 (lower is better)
Translates to: VKTSSVPGDEVS*LRIMMPPSSSS
Trigger: CGAGGACGACGATGGGGGCATCATGATGCGGAGCAAGGAGACTTCGTCCCCAGGAACCGACGATGTCTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CAA 90 bp ATGATGAACTGGTCCTTGGGGGTCAGCTTCACGATACGGAACTTGTaGATGAACCAGGTCAGGCCCAGCACCCCCAGCACGCGGGCGATG +
Preference number: 6 (lower is better)
Translates to: MMNWSLGVSFTIRNL*MNQVRPSTPSTRAM
Trigger: CATCGCCCGCGTGCTGGGGGTGCTGGGCCTGACCTGGTTCATCAACAAGTTCCGTATCGTGAAGCTGACCCCCAAGGACCAGTTCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CAA 90 bp GACCGCAGCCGCTGCCTGGTCTTCTGCAAGTTGTTCCTCAGGATTTaGCGGATCTCCTCCTCCTTGTCCTTGGACAGTGCTGGCAGGATG +
Preference number: 6 (lower is better)
Translates to: DRSRCLVFCKLFLRI*RISSSLSLDSAGRM
Trigger: CATCCTGCCAGCACTGTCCAAGGACAAGGAGGAGGAGATCCGCAAAATCCTGAGGAACAACTTGCAGAAGACCAGGCAGCGGCTGCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS CAA 90 bp CAGGCAGCAGACAGCCTGGGTTCAGATGTGGACTGCACCACAGACTaGCTCTGCAACCCCATGGAAGTCAGGCCCCACACACAGGGAAAA +
Preference number: 6 (lower is better)
Translates to: QAADSLGSDVDCTTD*LCNPMEVRPHTQGK
Trigger: TTTTCCCTGTGTGTGGGGCCTGACTTCCATGGGGTTGCAGAGCAAGTCTGTGGTGCAGTCCACATCTGAACCCAGGCTGTCTGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS TCA 72 bp CCACGGCAAAGATCAGGATGGTGCCCAGGTTTTCTGTaGACTGCCGCAGTGGCAGGAAGTAGCCCGCATCCA +
Preference number: 6 (lower is better)
Translates to: PRQRSGWCPGFL*TAAVAGSSPHP
Trigger: TGGATGCGGGCTACTTCCTGCCACTGCGGCAGTTCACAGAAAACCTGGGCACCATCCTGATCTTTGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS GCA 72 bp AGAGGCCACAGATGCCAGACCGCAGAACCATGGTGCTaGTTCCAGAGCCAGCCTCGACCTTACCCAAATGAG +
Preference number: 6 (lower is better)
Translates to: RGHRCQTAEPWC*FQSQPRPYPNE
Trigger: CTCATTTGGGTAAGGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS GCA 72 bp CTGGGTTCAGATGTGGACTGCACCACAGACTTGCTCTaGAACCCCATGGAAGTCAGGCCCCACACACAGGGA +
Preference number: 6 (lower is better)
Translates to: LGSDVDCTTDLL*NPMEVRPHTQG
Trigger: TCCCTGTGTGTGGGGCCTGACTTCCATGGGGTTGCAGAGCAAGTCTGTGGTGCAGTCCACATCTGAACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS GCA 72 bp ACAGCCTGGGTTCAGATGTGGACTGCACCACAGACTTaGTCTGCAACCCCATGGAAGTCAGGCCCCACACAC +
Preference number: 6 (lower is better)
Translates to: TAWVQMWTAPQT*SATPWKSGPTH
Trigger: GTGTGTGGGGCCTGACTTCCATGGGGTTGCAGAGCAAGTCTGTGGTGCAGTCCACATCTGAACCCAGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS GCA 72 bp CCTGCTTCTTCCTGGAGACACGGTCAGAGGTTTCACTaGCAAATGACCCCCACACTGGTCATCTGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: PASSWRHGQRFH*QMTPTLVIWPG
Trigger: CCCAGGCCAGATGACCAGTGTGGGGGTCATTTGGCAGTGAAACCTCTGACCGTGTCTCCAGGAAGAAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS CCA 72 bp GTGGAGAGAGGCCACAGATGCCAGACCGCAGAACCATaGTGCTGCTTCCAGAGCCAGCCTCGACAAAACGAT +
Preference number: 6 (lower is better)
Translates to: VERGHRCQTAEP*CCFQSQPRQND
Trigger: ATCGTTTTGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS CAA 72 bp AACTGGTCCTTGGGGGTCAGCTTCACGATACGGAACTaGTTGATGAACCAGGTCAGGCCCAGCACCCCCAGC +
Preference number: 6 (lower is better)
Translates to: NWSLGVSFTIRN*LMNQVRPSTPS
Trigger: GCTGGGGGTGCTGGGCCTGACCTGGTTCATCAACAAGTTCCGTATCGTGAAGCTGACCCCCAAGGACCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CAA 72 bp GACAGCCTGGGTTCAGATGTGGACTGCACCACAGACTaGCTCTGCAACCCCATGGAAGTCAGGCCCCACACA +
Preference number: 6 (lower is better)
Translates to: DSLGSDVDCTTD*LCNPMEVRPHT
Trigger: TGTGTGGGGCCTGACTTCCATGGGGTTGCAGAGCAAGTCTGTGGTGCAGTCCACATCTGAACCCAGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS CAA 90 bp TCCTCCTCAGCCACCTTTGCAGGATCCCGGCTCAACCCTAAGACTTaGCCCTTCAGCTCTTCATTCACCAGGTCCACAGACTCGGGTGAC +
Preference number: 6 (lower is better)
Translates to: SSSATFAGSRLNPKT*PFSSSFTRSTDSGD
Trigger: GTCACCCGAGTCTGTGGACCTGGTGAATGAAGAGCTGAAGGGCAAAGTCTTAGGGTTGAGCCGGGATCCTGCAAAGGTGGCTGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263980.8
ENST00000374089.5
ENST00000447808.1
CDS TCA 72 bp GAAGGAAGGCTGGGACCTTTGGCTGAGGAAAGTGACTaGGGAGCTGGGACTCTGGGCTGTGGGCTAAAGGAA +
Preference number: 6 (lower is better)
Translates to: EGRLGPLAEESD*GAGTLGCGLKE
Trigger: TTCCTTTAGCCCACAGCCCAGAGTCCCAGCTCCTCAGTCACTTTCCTCAGCCAAAGGTCCCAGCCTTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263980.8
CDS GCA 72 bp AGAGGCCACAGATGCCAGACCGCAGAACCATGGTGCTaGTTCCAGAGCCAGCCTCGACAAAACGATTTCACG +
Preference number: 6 (lower is better)
Translates to: RGHRCQTAEPWC*FQSQPRQNDFT
Trigger: CGTGAAATCGTTTTGTCGAGGCTGGCTCTGGAAGCAGCACCATGGTTCTGCGGTCTGGCATCTGTGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS GCA 72 bp AGTGGTGGTGACCGTAGTGGCCACAGATGTCTTCGATaGCTGTCAGAAGGTGGTCCAGGAACTGAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: SGGDRSGHRCLR*LSEGGPGTERG
Trigger: GCCCCTTTCAGTTCCTGGACCACCTTCTGACAGGCATCGAAGACATCTGTGGCCACTACGGTCACCACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447808.1
CDS GCA 72 bp AGTGGTGGTGACCGTAGTGGCCACAGATGTCTTCGATaGCTGTCAGAAGGTGGTCCAGGAACTGTGTGTGGA +
Preference number: 6 (lower is better)
Translates to: SGGDRSGHRCLR*LSEGGPGTVCG
Trigger: TCCACACACAGTTCCTGGACCACCTTCTGACAGGCATCGAAGACATCTGTGGCCACTACGGTCACCACCACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374089.5
CDS GCA 72 bp CGAAGAAGCTCAGGAAGCCGAGGAAGATGTCCACGATaGCCACGTGTTCGTAGTTGGCAAACTCCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: RRSSGSRGRCPR*PRVRSWQTPQR
Trigger: TCTTTGAGGAGTTTGCCAACTACGAACACGTGGGCATCGTGGACATCTTCCTCGGCTTCCTGAGCTTCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CCA 72 bp CGAGGAAGATGTCCACGATGCCCACGTGTTCGTAGTTaGCAAACTCCTCAAAGAGGTGATACAGGACCACAG +
Preference number: 6 (lower is better)
Translates to: RGRCPRCPRVRS*QTPQRGDTGPQ
Trigger: CTGTGGTCCTGTATCACCTCTTTGAGGAGTTTGCCAACTACGAACACGTGGGCATCGTGGACATCTTCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374086.3
CDS CAA 90 bp CAGGAACTGTGTGTGGATCTCTTCGTTGATGGAGCGCTTCGTCTCTaGCTTTTTCTTCACAGCCAACAGGTCTACCAGGGGCCGAATGGT +
Preference number: 6 (lower is better)
Translates to: QELCVDLFVDGALRL*LFLHSQQVYQGPNG
Trigger: ACCATTCGGCCCCTGGTAGACCTGTTGGCTGTGAAGAAAAAGCAAGAGACGAAGCGCTCCATCAACGAAGAGATCCACACACAGTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374089.5
CDS TCA 72 bp AACAGCAGCAGCAGATGGAACTGCACACCTGCCATGTaGCCAACACACGTGCTTGGAAGTGTTCTAGCATCA +
Preference number: 6 (lower is better)
Translates to: NSSSRWNCTPAM*PTHVLGSVLAS
Trigger: TGATGCTAGAACACTTCCAAGCACGTGTGTTGGTCACATGGCAGGTGTGCAGTTCCATCTGCTGCTGCTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS CAA 72 bp TGTGTGGATCTCTTCGTTGATGGAGCGCTTCGTCTCTaGCTTTTTCTTCACAGCCAACAGGTCTACCAGGGG +
Preference number: 6 (lower is better)
Translates to: CVDLFVDGALRL*LFLHSQQVYQG
Trigger: CCCCTGGTAGACCTGTTGGCTGTGAAGAAAAAGCAAGAGACGAAGCGCTCCATCAACGAAGAGATCCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374089.5
CDS TCA 72 bp GAAGGTGGTCCAGGAACTGTGTGTGGATCTCTTCGTTaGTGGAGCGCTTCGTCTCTTGCTTTTTCTTCACAG +
Preference number: 6 (lower is better)
Translates to: EGGPGTVCGSLR*WSASSLAFSSQ
Trigger: CTGTGAAGAAAAAGCAAGAGACGAAGCGCTCCATCAACGAAGAGATCCACACACAGTTCCTGGACCACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374089.5
CDS GCA 72 bp TATTTCCAGAATCCATCCATTTCTGACCACCTCCATTaGCCACTCTGGTCCAAGCAGTGCCATTTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: YFQNPSISDHLH*PLWSKQCHFPH
Trigger: GTGGGGAAAATGGCACTGCTTGGACCAGAGTGGGCAATGGAGGTGGTCAGAAATGGATGGATTCTGGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS CCA 72 bp AATCCATCCATTTCTGACCACCTCCATTGCCCACTCTaGTCCAAGCAGTGCCATTTTCCCCACCCAGATTAT +
Preference number: 6 (lower is better)
Translates to: NPSISDHLHCPL*SKQCHFPHPDY
Trigger: ATAATCTGGGTGGGGAAAATGGCACTGCTTGGACCAGAGTGGGCAATGGAGGTGGTCAGAAATGGATGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS GCA 72 bp TCTGACCACCTCCATTGCCCACTCTGGTCCAAGCAGTaGCATTTTCCCCACCCAGATTATTGTTTCAACAAA +
Preference number: 6 (lower is better)
Translates to: SDHLHCPLWSKQ*HFPHPDYCFNK
Trigger: TTTGTTGAAACAATAATCTGGGTGGGGAAAATGGCACTGCTTGGACCAGAGTGGGCAATGGAGGTGGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374084.2
CDS CCA 72 bp GAACTGCACACCTGCCATGTGACCAACACACGTGCTTaGAAGTGTTCTAGCATCAATCAGCTCTCCAATATC +
Preference number: 6 (lower is better)
Translates to: ELHTCHVTNTRA*KCSSINQLSNI
Trigger: GATATTGGAGAGCTGATTGATGCTAGAACACTTCCAAGCACGTGTGTTGGTCACATGGCAGGTGTGCAGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS CCA 72 bp TTATCTAAAGACAGGTCCTTAAGGCCTGCTTCTTCCTaGAGACACGGTCAGAGGTTTCACTGCCAAATGACC +
Preference number: 6 (lower is better)
Translates to: LSKDRSLRPASS*RHGQRFHCQMT
Trigger: GGTCATTTGGCAGTGAAACCTCTGACCGTGTCTCCAGGAAGAAGCAGGCCTTAAGGACCTGTCTTTAGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS CAA 72 bp AGAAGGTGGTCCAGGAACTGTGTGTGGATCTCTTCGTaGATGGAGCGCTTCGTCTCTTGCTTTTTCTTCACA +
Preference number: 6 (lower is better)
Translates to: RRWSRNCVWISS*MERFVSCFFFT
Trigger: TGTGAAGAAAAAGCAAGAGACGAAGCGCTCCATCAACGAAGAGATCCACACACAGTTCCTGGACCACCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263980.8
ENST00000374089.5
CDS TCA 72 bp GTCCTTCCATTGTCTCTATTTAACAGATGCAGAAACTaGGGCTCAGAGAGGATAAGCAGCTTTCTAAGATCC +
Preference number: 6 (lower is better)
Translates to: VLPLSLFNRCRN*GSERISSFLRS
Trigger: GGATCTTAGAAAGCTGCTTATCCTCTCTGAGCCTCAGTTTCTGCATCTGTTAAATAGAGACAATGGAAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374089.5
CDS CAA 90 bp CATAAGGGCTTTCGAATAATCTCTGGCCAAAAACTTGAGTCATCCTaGGCTCCTTTCTGTCATATCAATCCTCCACAAATAGTGTCAATT +
Preference number: 6 (lower is better)
Translates to: HKGFRIISGQKLESS*APFCHINPPQIVSI
Trigger: AATTGACACTATTTGTGGAGGATTGATATGACAGAAAGGAGCCAAGGATGACTCAAGTTTTTGGCCAGAGATTATTCGAAAGCCCTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374084.2