RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC8A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100678

Ensembl transcript IDs: ENST00000216568.11, ENST00000356921.7, ENST00000357887.7, ENST00000381269.6, ENST00000394330.6, ENST00000494208.5, ENST00000528359.5, ENST00000533541.1, ENST00000533899.1, ENST00000534137.5

Found 1103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAAGAGTATGTAGAGGAGCCACAGGCTCACAAAGAGCCATGTTGTaGCGAGCTTGCAGCCACGGGGGCCACCAAGCTCCCCTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: QRVCRGATGSQRAML*RACSHGGHQAPLPG
Trigger: ACCTGGGAGGGGAGCTTGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACATGGCTCTTTGTGAGCCTGTGGCTCCTCTACATACTCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR CCA 90 bp TGCAGGGCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTaGGCTGAACCCAGGAATGAGAGACAAGGGCTAGGGGGCCACTCC +
Preference number: 1 (lower is better)
Translates to: CRACLPVCPKSSLSW*AEPRNERQGLGGHS
Trigger: GGAGTGGCCCCCTAGCCCTTGTCTCTCATTCCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGCCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CCA 90 bp GTGTGCAGGGCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTaGTGGGCTGAACCCAGGAATGAGAGACAAGGGCTAGGGGGCCAC +
Preference number: 1 (lower is better)
Translates to: VCRACLPVCPKSSLS*WAEPRNERQGLGGH
Trigger: GTGGCCCCCTAGCCCTTGTCTCTCATTCCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGCCCTGCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR TCA 90 bp CCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAACACCATCACTCCTCCCAAGAACTCA +
Preference number: 1 (lower is better)
Translates to: PVEAPVRSLVPCVGE*AYFYPNTITPPKNS
Trigger: TGAGTTCTTGGGAGGAGTGATGGTGTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR GCA 90 bp CCCTGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTaGAGTGATCTGAAAGATTCTGAAGGGCTTTCCAGTTCTGATATT +
Preference number: 1 (lower is better)
Translates to: PWVGHIPSLGFPFLI*SDLKDSEGLSSSDI
Trigger: AATATCAGAACTGGAAAGCCCTTCAGAATCTTTCAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR TCA 90 bp GGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTATaGCAACTAAGATTCCTCTTACTGGAGCAAGAACTACCCCATAGG +
Preference number: 1 (lower is better)
Translates to: GTEISFSKNPGSKGL*QLRFLLLEQELPHR
Trigger: CCTATGGGGTAGTTCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CCA 90 bp TGCAGGGTGAACTGTGGACTCAAGGAAGACGGGGCTCTGTCTTTGTaGTTTATATATGTATCACAGGGCCTTGCAGGGTGTTTGACTTTA +
Preference number: 1 (lower is better)
Translates to: CRVNCGLKEDGALSL*FIYVSQGLAGCLTL
Trigger: TAAAGTCAAACACCCTGCAAGGCCCTGTGATACATATATAAACCACAAAGACAGAGCCCCGTCTTCCTTGAGTCCACAGTTCACCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CCA 90 bp GAAGTTTGCCATCCCATAATATCTCCCCAGGGAACCTTGACACCCTaGGAAGCTGCTTGGAGTAGATGCCTGATTTTAACTGTCATATGG +
Preference number: 1 (lower is better)
Translates to: EVCHPIISPQGTLTP*EAAWSRCLILTVIW
Trigger: CCATATGACAGTTAAAATCAGGCATCTACTCCAAGCAGCTTCCCAGGGTGTCAAGGTTCCCTGGGGAGATATTATGGGATGGCAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR GCA 90 bp ACCTTCTTAAAGCCTCAAATGTTGTTAGCTGTTGTCTTGGCCAATTaGAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTC +
Preference number: 1 (lower is better)
Translates to: TFLKPQMLLAVVLAN*KDLEMPKGICLAYL
Trigger: GAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCCAAGACAACAGCTAACAACATTTGAGGCTTTAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR GCA 90 bp TGGGCTTATTGTTCTCCTTTGACTACTTTTTCAGTAAGGGAAGTTTaGCATCCCATAATATCTCCCCAGGGAACCTTGACACCCTGGGAA +
Preference number: 1 (lower is better)
Translates to: WAYCSPLTTFSVREV*HPIISPQGTLTPWE
Trigger: TTCCCAGGGTGTCAAGGTTCCCTGGGGAGATATTATGGGATGGCAAACTTCCCTTACTGAAAAAGTAGTCAAAGGAGAACAATAAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CCA 90 bp AGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCTTTGTGGCACCTTTTTCACTCACTT +
Preference number: 1 (lower is better)
Translates to: RWQESMCLKIHVSLC*LGPGIPLWHLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CCA 90 bp GAATTTGATGTGAATTCAGCTACTCTCTTGAAGGATATGTTTGCTTaGTACAGGAAAGATTTCCCTTGGCCCAGCCAGAAAAGTCCTGTC +
Preference number: 1 (lower is better)
Translates to: EFDVNSATLLKDMFA*YRKDFPWPSQKSPV
Trigger: GACAGGACTTTTCTGGCTGGGCCAAGGGAAATCTTTCCTGTACCAAGCAAACATATCCTTCAAGAGAGTAGCTGAATTCACATCAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR GCA 90 bp ACGGGGGCCACCAAGCTCCCCTCCCAGGTGCGGCCGCCTTCGGTACAAGAGCACGGAGGGCAGCAGCTTTaGTGGCAAACGTATCTGGGA +
Preference number: 2 (lower is better)
Translates to: TGATKLPSQVRPPSVQEHGGQQL*WQTYLG
Trigger: TCCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC...GTGCTCTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR GCA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGCGGAGAAGGCCAGTGTaGCGGCCGACACGTGGAACT +
Preference number: 2 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRRRRPV*RPTRGT
Trigger: AGTTCCACGTGTCGGCCGGCACACTGGCCTTCTCCG...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp CTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATAGGCCTCGTGCCGGCCGACACGTaGAACTCCTGTCCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: LLEALLCGLEPLDVAIGLVPADT*NSCPCR
Trigger: TCTGCAGGGACAGGAGTTCCACGTGTCGGCCGGCAC...GAGGCCTATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTCTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGILGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CAA 90 bp GCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAAAAAGCAGCTaGAGCTGGTGGGCTGAACCCAGGAATGAGAGACAAGGGCTAGGG +
Preference number: 2 (lower is better)
Translates to: AKVCRACLPVCPKSS*SWWAEPRNERQGLG
Trigger: CCCTAGCCCTTGTCTCTCATTCCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGCTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: MELGREEKPCFQRNERQRLGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp GGCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACCTCATCCTCATCCCCTaGTGCACTGACGGTGATGGC +
Preference number: 2 (lower is better)
Translates to: GKRIWDRGAKCHENNSCDLILIP*CTDGDG
Trigger: GCCATCACCGTCAGTGCAGCAGGGGATGAGGATGAG...GTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CCA 90 bp GGCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: GKRIWDRGAKCHENNSCDVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...GTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CCA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAAATGCAGGGTGAACTGTaGACTCAAGGAAGACGGGGC +
Preference number: 2 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQMQGEL*TQGRRG
Trigger: GCCCCGTCTTCCTTGAGTCCACAGTTCACCCTGCAT...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: WAERRNPASKEMRGKGIILGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGTGCTCTGTTTCTTTCTaGGGCAACTGGGATGCCAGC +
Preference number: 2 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLCSVSF*GNWDAS
Trigger: GCTGGCATCCCAGTTGCCCCAGAAAGAAACAGAGCA...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp GGCCAATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATACCGCTGGCCTGCGCTaGGGTTTTGGAAAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: GQLQGLGDAQRYLPGLPHTAGLR*GFGKRF
Trigger: AAACCTCTTTCCAAAACCCCAGCGCAGGCCAGCGGT...ATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARLGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGCCTCTCCAGGGCAGTaGAGTCGGGAGAGATCACTG +
Preference number: 2 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHASPGQ*SRERSL
Trigger: CAGTGATCTCTCCCGACTGCACTGCCCTGGAGAGGC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: MELGREEKPCFQRNERQRVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGATGGAGCCAAGAGGTaGCAGGAGAGCATGTGTCTA +
Preference number: 2 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIDGAKR*QESMCL
Trigger: TAGACACATGCTCTCCTGCCACCTCTTGGCTCCATC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 2 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGESSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp GGAGGGCAGCAGCTTTGCTGGCAAACGTATCTGGAAAAGGACAAAGACACATGGATAATACCGCTGGCCTaGGCTGGGGTTTTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: GGQQLCWQTYLEKDKDTWIIPLA*AGVLER
Trigger: TCTTTCCAAAACCCCAGCGCAGGCCAGCGGTATTAT...CCATGTGTCTTTGTCCTTTTCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGTGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: MELGREEKPCFQRNERQRCQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATAGGCCTCAGTGAGATGGGGAACTaGATCTTGATGGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: LLEALLCGLEPLDVAIGLSEMGN*ILMEPR
Trigger: TCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACT...GAGGCCTATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTCCCATCTCTTCTATTTaGCGGGTCTTCCTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIPISSI*RVFLQK
Trigger: CTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGG...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GGAGGGCAGCAGCTTTGCTGGCAAACGTATCTGGAAAAGGACAAAGACACATGGTCTGCATATACATCCTaGAGGGCAGCAGCTTTGCTG +
Preference number: 2 (lower is better)
Translates to: GGQQLCWQTYLEKDKDTWSAYTS*RAAALL
Trigger: CAGCAAAGCTGCTGCCCTCCAGGATGTATATGCAGA...CCATGTGTCTTTGTCCTTTTCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGCCAATGGAGGCGTCTaGATATACATCCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKANGGV*IYILEG
Trigger: GCCCTCCAGGATGTATATGCAGACGCCTCCATTGGC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR GCA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGATGCCCAAAGGTATCTaGCTGGCTTACCTCATTATT +
Preference number: 2 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRMPKGI*LAYLII
Trigger: AATAATGAGGTAAGCCAGGCAGATACCTTTGGGCAT...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTAGGGACATATGGAATTaGGCAGAGAGGAGAAACCCT +
Preference number: 2 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIRDIWN*AERRNP
Trigger: AGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGAGAATTGGAAAGGCTTaGGCAAAGAGGGACAATTGC +
Preference number: 2 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGERIGKA*AKRDNC
Trigger: GCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGGGCAGCAGCTTTGCTaGCAAACGTATCTGGGACAG +
Preference number: 2 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLGQQLC*QTYLGQ
Trigger: CTGTCCCAGATACGTTTGCCAGCAAAGCTGCTGCCC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR CAA 90 bp ACATGCAGGGTGAACTGTGGACTCAAGGAAGACGGGGCTCTGTCTTaGTGGTTTATATATGTATCACAGGGCCTTGCAGGGTGTTTGACT +
Preference number: 2 (lower is better)
Translates to: TCRVNCGLKEDGALS*WFIYVSQGLAGCLT
Trigger: AGTCAAACACCCTGCAAGGCCCTGTGATACATATATAAACCACAAAGACAGAGCCCCGTCTTCCTTGAGTCCACAGTTCACCCTGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAAC +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNPCVGE*AYFYPN
Trigger: GTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTTACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 2 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTACATCTCTTCTCTCCTaGCTCAGGTACAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGITSLLS*LRYKAK
Trigger: TTTGGCTTTGTACCTGAGGCAGGAGAGAAGAGATGT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCGGAGAAGGCCAGTGTaGCGGCCGACACGTGGAACT +
Preference number: 2 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDRRRPV*RPTRGT
Trigger: AGTTCCACGTGTCGGCCGGCACACTGGCCTTCTCCG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTATGTTGTGGCGAGCTTaGAGCCACGGGGGCCACCAA +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIMLWRA*SHGGHQ
Trigger: TTGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACAT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARCQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 2 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 2 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHLLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGATGGAGCCAAGAGGTaGCAGGAGAGCATGTGTCTA +
Preference number: 2 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHDGAKR*QESMCL
Trigger: TAGACACATGCTCTCCTGCCACCTCTTGGCTCCATC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGATGGAGCCAAGAGGTaGCAGGAGAGCATGTGTCTA +
Preference number: 2 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKDGAKR*QESMCL
Trigger: TAGACACATGCTCTCCTGCCACCTCTTGGCTCCATC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGAGTGAGATGGGGAACTaGATCTTGATGGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVSEMGN*ILMEPR
Trigger: TCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACT...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAATGGCCTCCATGAACTaGTCCCTCCAGGAATGGGTC +
Preference number: 2 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARMASMN*SLQEWV
Trigger: GACCCATTCCTGGAGGGACCAGTTCATGGAGGCCAT...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CCA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAAATTGGACCACTTACTTaGGCATGTAGCTTAACCTCT +
Preference number: 2 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQIGPLT*ACSLTS
Trigger: AGAGGTTAAGCTACATGCCCAAGTAAGTGGTCCAAT...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp GGCCAATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATATCCACAGGCCTTCCTaGGATCATCCATCTAATTTC +
Preference number: 2 (lower is better)
Translates to: GQLQGLGDAQRYLPGLPHIHRPS*DHPSNF
Trigger: GAAATTAGATGGATGATCCCAGGAAGGCCTGTGGAT...ATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAAC +
Preference number: 2 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAPCVGE*AYFYPN
Trigger: GTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATAGTACCCTGCGTGGGTaGGTGAGCTTATTTCTACCC +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNSTLRG*VSLFLP
Trigger: GGGTAGAAATAAGCTCACTCACCCACGCAGGGTACT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHSLVGK*PSLRRS
Trigger: ACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKSLVGK*PSLRRS
Trigger: ACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 2 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAAGCCAATGGAGGCGTCTaGATATACATCCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: DPFHTFNYIQRASAKATKANGGV*IYILEG
Trigger: GCCCTCCAGGATGTATATGCAGACGCCTCCATTGGC...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGTGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKCQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: WAERRNPASKEMRGKGIIEMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCCCATCTCTTCTATTTaGCGGGTCTTCCTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKPISSI*RVFLQK
Trigger: CTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCCCATCTCTTCTATTTaGCGGGTCTTCCTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLPISSI*RVFLQK
Trigger: CTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGTATTTAATAGGGCTTTaGGAAACATTACAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRYLIGL*ETLQGE
Trigger: TTCCCCCTGTAATGTTTCCCAAAGCCCTATTAAATA...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 90 bp AAGCCTCAAATGTTGTTAGCTGTTGTCTTGGCCAATTGCAAGGACTaGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATTATTGCC +
Preference number: 2 (lower is better)
Translates to: KPQMLLAVVLANCKD*EMPKGICLAYLIIA
Trigger: GGCAATAATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCCAAGACAACAGCTAACAACATTTGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 90 bp CACAGGGTAACCTTCTTAAAGCCTCAAATGTTGTTAGCTGTTGTCTaGGCCAATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: HRVTFLKPQMLLAVV*ANCKDLEMPKGICL
Trigger: CAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCCAAGACAACAGCTAACAACATTTGAGGCTTTAAGAAGGTTACCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 90 bp GTGGGCTTATTGTTCTCCTTTGACTACTTTTTCAGTAAGGGAAGTTaGCCATCCCATAATATCTCCCCAGGGAACCTTGACACCCTGGGA +
Preference number: 2 (lower is better)
Translates to: VGLLFSFDYFFSKGS*PSHNISPGNLDTLG
Trigger: TCCCAGGGTGTCAAGGTTCCCTGGGGAGATATTATGGGATGGCAAACTTCCCTTACTGAAAAAGTAGTCAAAGGAGAACAATAAGCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 2 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 2 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHSSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGAAATGCTTTCATATGTaGCCTGAGGGACCAGGAGAG +
Preference number: 2 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLKCFHM*PEGPGE
Trigger: CTCTCCTGGTCCCTCAGGTCACATATGAAAGCATTT...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp GGAGGGCAGCAGCTTTGCTGGCAAACGTATCTGGAAAAGGACAAAGACACATGGAAATGTGTAAATTGCTaGACACACATGGTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: GGQQLCWQTYLEKDKDTWKCVNC*THMVSV
Trigger: GACAGACACCATGTGTGTTCAGCAATTTACACATTT...CCATGTGTCTTTGTCCTTTTCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR GCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARSLVGK*PSLRRS
Trigger: ACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATTCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNSLVGK*PSLRRS
Trigger: ACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGA...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCATTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 2 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTEMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNEMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 2 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLLLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 2 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGCTGGCAAACGTATCTaGGACAGAGGTGCCAAATGC +
Preference number: 2 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAAGKRI*DRGAKC
Trigger: GCATTTGGCACCTCTGTCCCAGATACGTTTGCCAGC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CCA 90 bp CTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATCAGGGGATGCCAGCTCCCTaGCAGAAGTTCAGAGTTCAG +
Preference number: 2 (lower is better)
Translates to: LSIPSTISKELQPKPLNQGMPAP*QKFRVQ
Trigger: CTGAACTCTGAACTTCTGCCAGGGAGCTGGCATCCC...CTGATTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 90 bp TTTGTTCTTCCAGTAGCCCTTTGTCGTCACACACCATTCCTATTTTaGTCCCATCTCTTCTATTTGGCGGGTCTTCCTGCAGAAGGATAC +
Preference number: 2 (lower is better)
Translates to: FVLPVALCRHTPFLF*SHLFYLAGLPAEGY
Trigger: GTATCCTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGACAAAAATAGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CAA 90 bp AACCTTCTTAAAGCCTCAAATGTTGTTAGCTGTTGTCTTGGCCAATaGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCT +
Preference number: 2 (lower is better)
Translates to: NLLKASNVVSCCLGQ*QGLGDAQRYLPGLP
Trigger: AGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCCAAGACAACAGCTAACAACATTTGAGGCTTTAAGAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGACTCAGAGAAAACAGTaGGATGGGGAACTGGATCTT +
Preference number: 2 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKTQRKQ*DGELDL
Trigger: AAGATCCAGTTCCCCATCTCACTGTTTTCTCTGAGT...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAAC +
Preference number: 2 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDPCVGE*AYFYPN
Trigger: GTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNSSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 2 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGTACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 2 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 2 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACACATCTCTTCTCTCCTaGCTCAGGTACAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHTSLLS*LRYKAK
Trigger: TTTGGCTTTGTACCTGAGGCAGGAGAGAAGAGATGT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLEMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTAGGGACATATGGAATTaGGCAGAGAGGAGAAACCCT +
Preference number: 2 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTRDIWN*AERRNP
Trigger: AGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCT...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAAGGGACATATGGAATTaGGCAGAGAGGAGAAACCCT +
Preference number: 2 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARRDIWN*AERRNP
Trigger: AGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCT...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFILLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATACTCAGAGAAAACAGTaGGATGGGGAACTGGATCTT +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNTQRKQ*DGELDL
Trigger: AAGATCCAGTTCCCCATCTCACTGTTTTCTCTGAGT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGGAACATGGGAGAAATaGGGAATTCCAGTTCCTATC +
Preference number: 2 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTGTWEK*GIPVPI
Trigger: GATAGGAACTGGAATTCCTCATTTCTCCCATGTTCC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGGCTCCAAGGGATTATaGCAACTAAGATTCCTCTTA +
Preference number: 2 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLGSKGL*QLRFLL
Trigger: TAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTTTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAACATCTCTTCTCTCCTaGCTCAGGTACAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGATSLLS*LRYKAK
Trigger: TTTGGCTTTGTACCTGAGGCAGGAGAGAAGAGATGT...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATTATCTGGGACAGAGGTaGCAAATGCCACGAAAACAA +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNYLGQR*QMPRKQ
Trigger: TTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATA...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 2 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDLLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 2 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATAGAATTGGAAAGGCTTaGGCAAAGAGGGACAATTGC +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNRIGKA*AKRDNC
Trigger: GCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAATTGGAAAGGCTTaGGCAAAGAGGGACAATTGC +
Preference number: 2 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGARIGKA*AKRDNC
Trigger: GCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCT...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GGGCATCTCATCCACAGGCCTTCCTGGGATCATCCATCTAATTTCCAACCTTCTAAGGATATGTTTGCTTaGTACAGGAAAGATTTCCCT +
Preference number: 2 (lower is better)
Translates to: GHLIHRPSWDHPSNFQPSKDMFA*YRKDFP
Trigger: AGGGAAATCTTTCCTGTACCAAGCAAACATATCCTT...AGAAGGTTGGAAATTAGATGGATGATCCCAGGAAGGCCTGTGGATGAGATGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 90 bp GGTCAAAGAATTTACCCAAGGTCACATAGGATGTTAGCAAGAGACTaGACCCTAAAGTCCTCATGTAAGGACCCTTTCCATACCTTCAAC +
Preference number: 2 (lower is better)
Translates to: GQRIYPRSHRMLARD*TLKSSCKDPFHTFN
Trigger: GTTGAAGGTATGGAAAGGGTCCTTACATGAGGACTTTAGGGTCAAGTCTCTTGCTAACATCCTATGTGACCTTGGGTAAATTCTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 90 bp CTGTCTTTGTGGTTTATATATGTATCACAGGGCCTTGCAGGGTGTTaGACTTTAGATCTTGGCACAGATTGTAGATACAGGGAGGACTGT +
Preference number: 2 (lower is better)
Translates to: LSLWFIYVSQGLAGC*TLDLGTDCRYREDC
Trigger: ACAGTCCTCCCTGTATCTACAATCTGTGCCAAGATCTAAAGTCAAACACCCTGCAAGGCCCTGTGATACATATATAAACCACAAAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 2 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 2 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGGAACATGGGAGAAATaGGGAATTCCAGTTCCTATC +
Preference number: 2 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKGTWEK*GIPVPI
Trigger: GATAGGAACTGGAATTCCTCATTTCTCCCATGTTCC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCCTTCCCACATTCGTTaGGAAAAGGTCTGTAGGGCA +
Preference number: 2 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDPSHIR*EKVCRA
Trigger: TGCCCTACAGACCTTTTCTCAACGAATGTGGGAAGG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp GTTCAGAGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGTTTAATTACAGTAGTTaGGAGTTGCCTCCTTCAGTA +
Preference number: 2 (lower is better)
Translates to: VQSSEAPKPLTELSKEPGFNYSS*ELPPSV
Trigger: TACTGAAGGAGGCAACTCTCAACTACTGTAATTAAA...CCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACTCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR GCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTAGGGACATATGGAATTaGGCAGAGAGGAGAAACCCT +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIRDIWN*AERRNP
Trigger: AGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTCCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 2 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 2 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CAA 90 bp TGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGACTaGATTCAACATAAGCATAAAAAGCTCCTCCTGCTCCAGTTGAAG +
Preference number: 2 (lower is better)
Translates to: WKGLGKEGQLLFVSD*IQHKHKKLLLLQLK
Trigger: CTTCAACTGGAGCAGGAGGAGCTTTTTATGCTTATGTTGAATCAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCTCCATTGTTTGATTaGTTAAGACTTTGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNPPLFD*LRLCPF
Trigger: GAAAGGGCAAAGTCTTAATCAATCAAACAATGGAGG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 2 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 2 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATAGTACCCTGCGTGGGTaGGTGAGCTTATTTCTACCC +
Preference number: 2 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHSTLRG*VSLFLP
Trigger: GGGTAGAAATAAGCTCACTCACCCACGCAGGGTACT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGGAAAAATAGCTTCATaGAGTTTAAGAACAAGCAGG +
Preference number: 2 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLGKIAS*SLRTSR
Trigger: CCTGCTTGTTCTTAAACTTCATGAAGCTATTTTTCC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGGCTCCAAGGGATTATaGCAACTAAGATTCCTCTTA +
Preference number: 2 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKGSKGL*QLRFLL
Trigger: TAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 2 (lower is better)
Translates to: LGREEKPCFQRNERQRNNWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGCCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 2 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 2 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHLLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTAGAATTGGAAAGGCTTaGGCAAAGAGGGACAATTGC +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIRIGKA*AKRDNC
Trigger: GCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTAAGGAAAGATTTCCCTTaGCCCAGCCAGAAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLRKDFP*PSQKSP
Trigger: AGGACTTTTCTGGCTGGGCCAAGGGAAATCTTTCCT...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp CTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATCAGCCAATTGCAAGGACTTaGAGATGCCCAAAGGTATCT +
Preference number: 2 (lower is better)
Translates to: LSIPSTISKELQPKPLNQPIART*RCPKVS
Trigger: AGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGG...CTGATTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 90 bp TGGAAAGAGGTTTTCCTAGAATTTGATGTGAATTCAGCTACTCTCTaGAAGGATATGTTTGCTTGGTACAGGAAAGATTTCCCTTGGCCC +
Preference number: 2 (lower is better)
Translates to: WKEVFLEFDVNSATL*KDMFAWYRKDFPWP
Trigger: GGGCCAAGGGAAATCTTTCCTGTACCAAGCAAACATATCCTTCAAGAGAGTAGCTGAATTCACATCAAATTCTAGGAAAACCTCTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 2 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGGAAAAATAGCTTCATaGAGTTTAAGAACAAGCAGG +
Preference number: 2 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTGKIAS*SLRTSR
Trigger: CCTGCTTGTTCTTAAACTTCATGAAGCTATTTTTCC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 2 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 2 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATCAGTGGAGGTTAAGAAATTaGACCACTTACTTGGGCATG +
Preference number: 2 (lower is better)
Translates to: LSIPSTISKELQPKPLNQWRLRN*TTYLGM
Trigger: CATGCCCAAGTAAGTGGTCCAATTTCTTAACCTCCA...CTGATTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 90 bp GTATGTAATTCATCCTATAAAAAGATAAAAGCTGTGGAACTTCCTTaGGCTGTCCTGCTAGGAGATACTTTGTACTCACAGTGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: VCNSSYKKIKAVELP*AVLLGDTLYSQCPS
Trigger: GGAAGGACACTGTGAGTACAAAGTATCTCCTAGCAGGACAGCCAAAGGAAGTTCCACAGCTTTTATCTTTTTATAGGATGAATTACATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 2 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHSSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATAACAACAGCTGTGACTaGATCTTTGAGACCAATGGT +
Preference number: 2 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDNNSCD*IFETNG
Trigger: ACCATTGGTCTCAAAGATTCAGTCACAGCTGTTGTT...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR TCA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAACAGTTTCTTTGTCTGTaGAGTGGGGATAATAACTTA +
Preference number: 2 (lower is better)
Translates to: DPFHTFNYIQRASAKATKQFLCL*SGDNNL
Trigger: TAAGTTATTATCCCCACTTCACAGACAAAGAAACTG...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 2 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 2 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGAGTGAGATGGGGAACTaGATCTTGATGGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIESEMGN*ILMEPR
Trigger: TCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CAA 90 bp ATCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTT +
Preference number: 2 (lower is better)
Translates to: ISKFLHHFKKYSQPS*YRALGSKSVVKLTF
Trigger: AAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CAA 90 bp GGCTTTCCAGTTCTGATATTTACTGAGTGGGCTTATTGTTCTCCTTaGACTACTTTTTCAGTAAGGGAAGTTTGCCATCCCATAATATCT +
Preference number: 2 (lower is better)
Translates to: GFPVLIFTEWAYCSP*TTFSVREVCHPIIS
Trigger: AGATATTATGGGATGGCAAACTTCCCTTACTGAAAAAGTAGTCAAAGGAGAACAATAAGCCCACTCAGTAAATATCAGAACTGGAAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGACTCAGAGAAAACAGTaGGATGGGGAACTGGATCTT +
Preference number: 2 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIETQRKQ*DGELDL
Trigger: AAGATCCAGTTCCCCATCTCACTGTTTTCTCTGAGT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGTACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 2 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp CTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATCAGATTATAAACTCCACGTaGAGAAGGAAGCATGTGTAT +
Preference number: 2 (lower is better)
Translates to: LSIPSTISKELQPKPLNQIINST*RRKHVY
Trigger: ATACACATGCTTCCTTCTCCACGTGGAGTTTATAAT...CTGATTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR TCA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTACTTTCTGTTTGTCTCTaGGTGTTCCTAAGAAAAAGA +
Preference number: 2 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLLSVCL*VFLRKR
Trigger: TCTTTTTCTTAGGAACACTCAGAGACAAACAGAAAG...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 2 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 2 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR GCA 72 bp TTGCAGCCACGGGGGCCACCAAGCTCCCCTCCCAGGTaGGGCCGCCTTCGGTACAAGAGCACGCTGATGCAG +
Preference number: 3 (lower is better)
Translates to: LQPRGPPSSPPR*GRLRYKSTLMQ
Trigger: CTGCATCAGCGTGCTCTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGTGGCTGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR GCA 72 bp TGGGGCTTAGGTCCTGATGCTGCCTCTCCAGGGCAGTaGAGTCGGGAGAGATCACTGGTGGGGAAGTGCCCT +
Preference number: 3 (lower is better)
Translates to: WGLGPDAASPGQ*SRERSLVGKCP
Trigger: AGGGCACTTCCCCACCAGTGATCTCTCCCGACTGCACTGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR GCA 72 bp GGGCAGTGCAGTCGGGAGAGATCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: GQCSRERSLVGK*PSLRRSPRPAL
Trigger: CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGACTGCACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp CTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATAGGCCTCCATGTTGTGGCGAGCTaGCAGCCACGGGGGCCACCA +
Preference number: 3 (lower is better)
Translates to: LLEALLCGLEPLDVAIGLHVVAS*QPRGPP
Trigger: TGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACATG...GAGGCCTATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CAA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGGGGACAGAGGACATGTaGGGGAACCATGATGGGGAC +
Preference number: 3 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLGTEDM*GNHDGD
Trigger: GTCCCCATCATGGTTCCCCAACATGTCCTCTGTCCC...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CCA 72 bp TGCAGGAGGATGTGCTCTGTTTCTTTCTGGGGCAACTaGGATGCCAGCTCCCTGGCAGAAGTTCAGAGTTCA +
Preference number: 3 (lower is better)
Translates to: CRRMCSVSFWGN*DASSLAEVQSS
Trigger: TGAACTCTGAACTTCTGCCAGGGAGCTGGCATCCCAGTTGCCCCAGAAAGAAACAGAGCACATCCTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CCA 72 bp TGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTaGGCTGAACCCAGGAATGAGAGACAAGGGCTAGGG +
Preference number: 3 (lower is better)
Translates to: CLPVCPKSSLSW*AEPRNERQGLG
Trigger: CCCTAGCCCTTGTCTCTCATTCCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CCA 72 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTaGTGGGCTGAACCCAGGAATGAGAGACAAGGGCTA +
Preference number: 3 (lower is better)
Translates to: ACLPVCPKSSLS*WAEPRNERQGL
Trigger: TAGCCCTTGTCTCTCATTCCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGTCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCT +
Preference number: 3 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGESSSSP*SSHTIP
Trigger: AGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGA...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp CTGATGAGATTCAGCCTAACTTCCCTGCAGGAGGATGTGCTCTGTTTCTTTCTGAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 3 (lower is better)
Translates to: LMRFSLTSLQEDVLCFFLKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...CAGAAAGAAACAGAGCACATCCTCCTGCAGGGAAGTTAGGCTGAATCTCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKLPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTLPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARLPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCTGCTGGAGGCTCTGTaGTGTGGCTTAGAACCCCTT +
Preference number: 3 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKLLEAL*CGLEPL
Trigger: AAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CAA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAAGTGGAGGTTAAGAAATaGGACCACTTACTTGGGCAT +
Preference number: 3 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQVEVKK*DHLLGH
Trigger: ATGCCCAAGTAAGTGGTCCAATTTCTTAACCTCCAC...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGTTCAGTAAGGGAAGTTaGCCATCCCATAATATCTCC +
Preference number: 3 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRFSKGS*PSHNIS
Trigger: GGAGATATTATGGGATGGCAAACTTCCCTTACTGAA...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR GCA 72 bp GGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTaGAGTGATCTGAAAGATTCTGAAGGGCTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: GHIPSLGFPFLI*SDLKDSEGLSS
Trigger: ACTGGAAAGCCCTTCAGAATCTTTCAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CCA 72 bp CCAACAGTTATTGAGCAATGCCTACTGATTGAGCACTaGGTGAGGTGCTGGATTTTGGGGACAGAGGACATG +
Preference number: 3 (lower is better)
Translates to: PTVIEQCLLIEH*VRCWILGTEDM
Trigger: CATGTCCTCTGTCCCCAAAATCCAGCACCTCACCCAGTGCTCAATCAGTAGGCATTGCTCAATAACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKLPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVLPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp GAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGCAGCCCCTATTTAATAGGGCTTaGGGAAACATTACAGGGGGA +
Preference number: 3 (lower is better)
Translates to: EAPKPLTELSKEPGLVQPLFNRA*GNITGG
Trigger: TCCCCCTGTAATGTTTCCCAAAGCCCTATTAAATAG...GGGCTGCACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR TCA 72 bp GTGCGTGTTTTAAAGCCAGGTCCTTCCCACATTCGTTaGGAAAAGGTCTGTAGGGCACGGAGATCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: VRVLKPGPSHIR*EKVCRARRSLS
Trigger: AGAAAGAGATCTCCGTGCCCTACAGACCTTTTCTCAACGAATGTGGGAAGGACCTGGCTTTAAAACACGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CCA 72 bp CATCCCATAATATCTCCCCAGGGAACCTTGACACCCTaGGAAGCTGCTTGGAGTAGATGCCTGATTTTAACT +
Preference number: 3 (lower is better)
Translates to: HPIISPQGTLTP*EAAWSRCLILT
Trigger: AGTTAAAATCAGGCATCTACTCCAAGCAGCTTCCCAGGGTGTCAAGGTTCCCTGGGGAGATATTATGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 3 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKSHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHSHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp AATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATTATTGCTGTGGAACTTCCTTaGGCTGTCCTGCTAGGAGAT +
Preference number: 3 (lower is better)
Translates to: NCKDLEMPKGICLAYLIIAVELP*AVLLGD
Trigger: ATCTCCTAGCAGGACAGCCAAAGGAAGTTCCACAGC...AATAATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 3 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCATCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGASHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCATCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCT +
Preference number: 3 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGASSSSP*SSHTIP
Trigger: AGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGA...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 3 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTTCACAAAGAGCCATGTaGTGGCGAGCTTGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: ESLKIRGQFRDDILCLFISQRAM*WRACSH
Trigger: GTGGCTGCAAGCTCGCCACAACATGGCTCTTTGTGA...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CAA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 3 (lower is better)
Translates to: GHMELGREEKPCFQRNERVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 3 (lower is better)
Translates to: LGREEKPCFQRNERQRNNGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCAGAATTGGAAAGGCTaGGGCAAAGAGGGACAATTG +
Preference number: 3 (lower is better)
Translates to: LGREEKPCFQRNERQRNNQNWKG*GKEGQL
Trigger: CAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp GGAGGGCAGCAGCTTTGCTGGCAAACGTATCTGGAAAAGGACAAAGACACATGGATGGTGTCTGTCACATaGAAAGTGCTCAAGAAATAT +
Preference number: 3 (lower is better)
Translates to: GGQQLCWQTYLEKDKDTWMVSVT*KVLKKY
Trigger: ATATTTCTTGAGCACTTTCAATGTGACAGACACCAT...CCATGTGTCTTTGTCCTTTTCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp CTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATCAGCAGGAAAGATTTCCCTaGGCCCAGCCAGAAAAGTCC +
Preference number: 3 (lower is better)
Translates to: LSIPSTISKELQPKPLNQQERFP*AQPEKS
Trigger: GGACTTTTCTGGCTGGGCCAAGGGAAATCTTTCCTG...CTGATTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR TCA 72 bp TTCAACATAAGCATAAAAAGCTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGG +
Preference number: 3 (lower is better)
Translates to: FNISIKSSSCSS*SSCKIFSTLRG
Trigger: CCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTTTTATGCTTATGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR GCA 72 bp GCATTTATTCACGAACCACCAACAGTTATTGAGCAATaGCTACTGATTGAGCACTGGGTGAGGTGCTGGATT +
Preference number: 3 (lower is better)
Translates to: AFIHEPPTVIEQ*LLIEHWVRCWI
Trigger: AATCCAGCACCTCACCCAGTGCTCAATCAGTAGGCATTGCTCAATAACTGTTGGTGGTTCGTGAATAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 3 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 3 (lower is better)
Translates to: WAERRNPASKEMRGKGIIVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCAGAATTGGAAAGGCTaGGGCAAAGAGGGACAATTG +
Preference number: 3 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKQNWKG*GKEGQL
Trigger: CAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTG...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGTCTTCTTGATCAGTTaGTCCACCGTAGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: LGREEKPCFQRNERQRNNVFLIS*STVVLN
Trigger: GTTCAAGACTACGGTGGACAAACTGATCAAGAAGAC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494208.5
3UTR-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 3 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGGCAAAGAGGGACAATaGCTTTTTGTATCTGACTTG +
Preference number: 3 (lower is better)
Translates to: LGREEKPCFQRNERQRNNGKEGQ*LFVSDL
Trigger: CAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGGCAAAGAGGGACAATaGCTTTTTGTATCTGACTTG +
Preference number: 3 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAGKEGQ*LFVSDL
Trigger: CAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGGCAAAGAGGGACAATaGCTTTTTGTATCTGACTTG +
Preference number: 3 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARGKEGQ*LFVSDL
Trigger: CAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCT +
Preference number: 3 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDSSSSP*SSHTIP
Trigger: AGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCATATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGC +
Preference number: 3 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAYSQPS*YRALGS
Trigger: GCTTCCTAATGCTCTATACAAAGAGGGCTGACTATA...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CCA 72 bp GAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCTTTGTGGCACCTTTTT +
Preference number: 3 (lower is better)
Translates to: ESMCLKIHVSLC*LGPGIPLWHLF
Trigger: AAAAAGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACACATGCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 3 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGGCAAAGAGGGACAATaGCTTTTTGTATCTGACTTG +
Preference number: 3 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAGKEGQ*LFVSDL
Trigger: CAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR TCA 72 bp ATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTATaGCAACTAAGATTCCTCTTACTGGAGCAAGAACTA +
Preference number: 3 (lower is better)
Translates to: ISFSKNPGSKGL*QLRFLLLEQEL
Trigger: TAGTTCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR GCA 72 bp TCTGTCTTTGTGGTTTATATATGTATCACAGGGCCTTaGAGGGTGTTTGACTTTAGATCTTGGCACAGATTG +
Preference number: 3 (lower is better)
Translates to: SVFVVYICITGP*RVFDFRSWHRL
Trigger: CAATCTGTGCCAAGATCTAAAGTCAAACACCCTGCAAGGCCCTGTGATACATATATAAACCACAAAGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR-3UTR CAA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGTCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIESHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTTATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGC +
Preference number: 3 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIYSQPS*YRALGS
Trigger: GCTTCCTAATGCTCTATACAAAGAGGGCTGACTATA...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 3 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR TCA 72 bp AACATTACAGGGGGAAAATGTAAATGTGTAAATTGCTaGACACACATGGTGTCTGTCACATTGAAAGTGCTC +
Preference number: 3 (lower is better)
Translates to: NITGGKCKCVNC*THMVSVTLKVL
Trigger: GAGCACTTTCAATGTGACAGACACCATGTGTGTTCAGCAATTTACACATTTACATTTTCCCCCTGTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp ACGGGGGCCACCAAGCTCCCCTCCCAGGTGCGGCCGCCTTCGGTACAAGAGCACCTAGGCCTGCCCTGCTaGAGGCTCTGTTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TGATKLPSQVRPPSVQEHLGLPC*RLCCVA
Trigger: AGCCACACAACAGAGCCTCCAGCAGGGCAGGCCTAG...GTGCTCTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp ACGGGGGCCACCAAGCTCCCCTCCCAGGTGCGGCCGCCTTCGGTACAAGAGCACACCCAGAGCGGTGACTaGAATCTACGCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TGATKLPSQVRPPSVQEHTQSGD*NLRPGE
Trigger: CTCTCCCGGGCGTAGATTCCAGTCACCGCTCTGGGT...GTGCTCTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGGGCTTTCCCTGGGCTaGGAGCGCGCCGGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCGLSLG*ERAGSP
Trigger: CGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACGGGGGCCACCAAGCTCCCCTCCCAGGTGCGGCCGCCTTCGGTACAAGAGCACGCCAATGGAGGCGTCTaGATATACATCCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TGATKLPSQVRPPSVQEHANGGV*IYILEG
Trigger: GCCCTCCAGGATGTATATGCAGACGCCTCCATTGGC...GTGCTCTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCTCCTCCCCGGATTCATCCTCATCCTCATCCCCTGCTGCACTGACGGTGATGCCGGGTCTCCGCCTTaGACGCTGTCACCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PLLPGFILILIPCCTDGDAGSPP*TLSPRE
Trigger: CTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGC...ATCACCGTCAGTGCAGCAGGGGATGAGGATGAGGATGAATCCGGGGAGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp ACGGGGGCCACCAAGCTCCCCTCCCAGGTGCGGCCGCCTTCGGTACAAGAGCACGCACCTCGCTCATGCTaGAGGCCTTCTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: TGATKLPSQVRPPSVQEHAPRSC*RPSWLV
Trigger: AACAAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGC...GTGCTCTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp ACGGGGGCCACCAAGCTCCCCTCCCAGGTGCGGCCGCCTTCGGTACAAGAGCACGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: TGATKLPSQVRPPSVQEHGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...GTGCTCTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCTGCGGTCGCGTCGCCTaGGCTTTCCCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCCGRVA*AFPGLG
Trigger: TCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCA...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGGCTTGGCACGTCCCCTaGGCCACCAGCCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALAWHVP*ATSLCS
Trigger: CGAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGC...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCAGCTCCCCTCCCAGGTaGGGCCGCCTTCGGTACAAG +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCSSPPR*GRLRYK
Trigger: CTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCT...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGTGCGGTCGCGTCGCCTaGGCTTTCCCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALCGRVA*AFPGLG
Trigger: TCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCA...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACGGGGGCCACCAAGCTCCCCTCCCAGGTGCGGCCGCCTTCGGTACAAGAGCACACGAGACTTAGCCACTaGCTTCTATTGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: TGATKLPSQVRPPSVQEHTRLSH*LLLQHQ
Trigger: CTGGTGCTGCAATAGAAGCCAGTGGCTAAGTCTCGT...GTGCTCTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR GCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCGGAGAAGGCCAGTGTaGCGGCCGACACGTGGAACT +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCRRRPV*RPTRGT
Trigger: AGTTCCACGTGTCGGCCGGCACACTGGCCTTCTCCG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGACCTGGGCTCGGGCTTaGGGTCGCGTCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGETWARA*GRVAWA
Trigger: AGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCCACCGTGCCCTCTGTaGACTCATAGTCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCPPCPL*THSQPL
Trigger: CAGGGGCTGACTATGAGTTCACAGAGGGCACGGTGG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCATGTTGTGGCGAGCTTaGAGCCACGGGGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCMLWRA*SHGGHQ
Trigger: TTGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACAT...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGCCGGGTCTCCGCCTTaGACGCTGTCACCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIAGSPP*TLSPRE
Trigger: CTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTACCTGGGCTCGGGCTTaGGGTCGCGTCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGITWARA*GRVAWA
Trigger: AGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCTAGGCCTGCCCTGCTaGAGGCTCTGTTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCLGLPC*RLCCVA
Trigger: AGCCACACAACAGAGCCTCCAGCAGGGCAGGCCTAG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCTCCTCCCCGGATTCATCCTCATCCTCATCCCCTGCTGCACTGACGGTGATGGAGAGGCTGGTTTCTaGGCGAGCGGAGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PLLPGFILILIPCCTDGDGEAGF*ASGELC
Trigger: GCAAAGCTCTCCGCTCGCCCAGAAACCAGCCTCTCC...ATCACCGTCAGTGCAGCAGGGGATGAGGATGAGGATGAATCCGGGGAGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCACCCAGAGCGGTGACTaGAATCTACGCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCTQSGD*NLRPGE
Trigger: CTCTCCCGGGCGTAGATTCCAGTCACCGCTCTGGGT...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGCTTGGCACGTCCCCTaGGCCACCAGCCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIAWHVP*ATSLCS
Trigger: CGAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGCGAGCGGAGAGCTTTaGCCATTAAGCTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCASGEL*PLSCRK
Trigger: CTTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGACGCGCGGAGAGGCTaGTTTCTGGGCGAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEDARRG*FLGERR
Trigger: TCTCCGCTCGCCCAGAAACCAGCCTCTCCGCGCGTC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCTCACCGCCACCCTTaGCTGTCCCTTCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALPHRHP*LSLLLS
Trigger: GGACAGTAGAAGGGACAGCCAAGGGTGGCGGTGAGG...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGELGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAAC +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCPCVGE*AYFYPN
Trigger: GTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGCTTGGCACGTCCCCTaGGCCACCAGCCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVAWHVP*ATSLCS
Trigger: CGAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGC...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCTCCTCCCCGGATTCATCCTCATCCTCATCCCCTGCTGCACTGACGGTGATGCCATCTCCACCAGCTaGTCTAAGTCCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLLPGFILILIPCCTDGDAISTS*SKSFSG
Trigger: CCCAGAGAAGGACTTAGATCAGCTGGTGGAGATGGC...ATCACCGTCAGTGCAGCAGGGGATGAGGATGAGGATGAATCCGGGGAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGCAGCCCCGGAGAAGGCCAGTGTaGCGGCCGACACGTGGAACT +
Preference number: 4 (lower is better)
Translates to: EAPKPLTELSKEPGLVQPRRRPV*RPTRGT
Trigger: AGTTCCACGTGTCGGCCGGCACACTGGCCTTCTCCG...GGGCTGCACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTAGCTCCCCTCCCAGGTaGGGCCGCCTTCGGTACAAG +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGISSPPR*GRLRYK
Trigger: CTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCAGGACTCATTGTTCTaGCCTGTGCTTGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCQDSLF*PVLGTS
Trigger: GGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGTGCCGGCCGACACGTaGAACTCCTGTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEVPADT*NSCPCR
Trigger: TCTGCAGGGACAGGAGTTCCACGTGTCGGCCGGCAC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGGGCTTTCCCTGGGCTaGGAGCGCGCCGGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIGLSLG*ERAGSP
Trigger: CGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGGGCTTTCCCTGGGCTaGGAGCGCGCCGGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKGLSLG*ERAGSP
Trigger: CGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCGCCTGGGCTTTCCCTaGGCTGGGAGCGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKRLGFP*AGSAPG
Trigger: ACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACCGCCTGGGCTTTCCCTaGGCTGGGAGCGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHRLGFP*AGSAPG
Trigger: ACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCG...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGCGGGGCAGCGCATCTaGAGCGCGGGGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIAGQRI*SAGSGR
Trigger: CCTCCCAGACCCCGCGCTCCAGATGCGCTGCCCCGC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGAGCAGGCTCAGCAAGTaGTGGTTCCCTTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALSRLSK*WFPFLP
Trigger: GGGAAGGAAAGGGAACCATCACTTGCTGAGCCTGCT...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCAGTACCCTGCGTGGGTaGGTGAGCTTATTTCTACCC +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCSTLRG*VSLFLP
Trigger: GGGTAGAAATAAGCTCACTCACCCACGCAGGGTACT...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGCCCGACCCAGAGCGGTaGCTGGAATCTACGCCCGGG +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRPDPER*LESTPG
Trigger: CCCGGGCGTAGATTCCAGTCACCGCTCTGGGTCGGG...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTGCCCTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATACCACCGTGCCCTCTGTaGACTCATAGTCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PALLEALLCGLEPLDVAIPPCPL*THSQPL
Trigger: CAGGGGCTGACTATGAGTTCACAGAGGGCACGGTGG...TATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR GCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGGGAGGGCAGCAGCTTTaGTGGCAAACGTATCTGGGA +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALGGQQL*WQTYLG
Trigger: TCCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGCCTCTCCAGGGCAGTaGAGTCGGGAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEASPGQ*SRERSL
Trigger: CAGTGATCTCTCCCGACTGCACTGCCCTGGAGAGGC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGCCGGGTCTCCGCCTTaGACGCTGTCACCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIAGSPP*TLSPRE
Trigger: CTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGGCGGCGGGGGATTCCTaGAGGAAGGGGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRAAGDS*RKGQEG
Trigger: GCCTTCCTGCCCCTTCCTGCAGGAATCCCCCGCCGC...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCAGGACTCATTGTTCTaGCCTGTGCTTGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALQDSLF*PVLGTS
Trigger: GGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTG...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGTGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALCQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACTGACGCGCGGAGAGGCTaGTTTCTGGGCGAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ANVSGTEVPNATKTTAVTDARRG*FLGERR
Trigger: TCTCCGCTCGCCCAGAAACCAGCCTCTCCGCGCGTC...AGTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGCCTGGGCTTTCCCTaGGCTGGGAGCGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNRLGFP*AGSAPG
Trigger: ACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGCGGGGCAGCGCATCTaGAGCGCGGGGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNAGQRI*SAGSGR
Trigger: CCTCCCAGACCCCGCGCTCCAGATGCGCTGCCCCGC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCACGGAGAACTCCTTCTaGGTCTCTCCTGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCTENSF*VSPGFR
Trigger: TCTGAAGCCAGGAGAGACCCAGAAGGAGTTCTCCGT...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCCTCACCGCCACCCTTaGCTGTCCCTTCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEPHRHP*LSLLLS
Trigger: GGACAGTAGAAGGGACAGCCAAGGGTGGCGGTGAGG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR CAA 72 bp CCTCCCTCCCCTCTGATAGTTCAGGTCCCCCAAGGCTaGGAGAACAGAGATCACAGGGCATCTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: PPSPLIVQVPQG*ENRDHRASHPQ
Trigger: CTGTGGATGAGATGCCCTGTGATCTCTGTTCTCCAAGCCTTGGGGGACCTGAACTATCAGAGGGGAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGTCGTGCGGGTGACATaGGAAAGCACAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIVVRVT*ESTGSR
Trigger: CCTGCTGCCTGTGCTTTCTCATGTCACCCGCACGAC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR TCA 90 bp GGCCAATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATGTCGTGCGGGTGACATaGGAAAGCACAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQLQGLGDAQRYLPGLPHVVRVT*ESTGSR
Trigger: CCTGCTGCCTGTGCTTTCTCATGTCACCCGCACGAC...ATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVLGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCTTTCATATGTGACCTaGGGGACCAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCLSYVT*GTRRGE
Trigger: TTCACCTCTCCTGGTCCCTCAGGTCACATATGAAAG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCCTTCCCACATTCGTTaGGAAAAGGTCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCPSHIR*EKVCRA
Trigger: TGCCCTACAGACCTTTTCTCAACGAATGTGGGAAGG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACCCCGACCCAGAGCGGTaGCTGGAATCTACGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHPDPER*LESTPG
Trigger: CCCGGGCGTAGATTCCAGTCACCGCTCTGGGTCGGG...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCTCATCCTCATCCCCTaGTGCACTGACGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGELILIP*CTDGDG
Trigger: GCCATCACCGTCAGTGCAGCAGGGGATGAGGATGAG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTATGTTGTGGCGAGCTTaGAGCCACGGGGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIMLWRA*SHGGHQ
Trigger: TTGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACAT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCTCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCSLVGK*PSLRRS
Trigger: ACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGA...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGCCGGGTCTCCGCCTTaGACGCTGTCACCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNAGSPP*TLSPRE
Trigger: CTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAACCTGGGCTCGGGCTTaGGGTCGCGTCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGATWARA*GRVAWA
Trigger: AGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGT...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGAGGAAGGTACGCGATaGCCCCGCCGCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLEEGTR*PRRPAP
Trigger: AGGCGCCGGGCGGCGGGGGCATCGCGTACCTTCCTC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGAGGAAGGTACGCGATaGCCCCGCCGCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVEEGTR*PRRPAP
Trigger: AGGCGCCGGGCGGCGGGGGCATCGCGTACCTTCCTC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGAGGAAGGTACGCGATaGCCCCGCCGCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKEEGTR*PRRPAP
Trigger: AGGCGCCGGGCGGCGGGGGCATCGCGTACCTTCCTC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGACTTATCCACCCTCCTaGCTGCCAGTTATCGTCTGG +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALTYPPS*LPVIVW
Trigger: CCAGACGATAACTGGCAGCCAGGAGGGTGGATAAGT...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTCTAGGCCTGCCCTGCTaGAGGCTCTGTTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGILGLPC*RLCCVA
Trigger: AGCCACACAACAGAGCCTCCAGCAGGGCAGGCCTAG...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCEMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALLLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCCCATCTCTTCTATTTaGCGGGTCTTCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCPISSI*RVFLQK
Trigger: CTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGGGCTTTCCCTGGGCTaGGAGCGCGCCGGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLGLSLG*ERAGSP
Trigger: CGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCGCCTGGGCTTTCCCTaGGCTGGGAGCGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVARLGFP*AGSAPG
Trigger: ACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTGCGGTCGCGTCGCCTaGGCTTTCCCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKCGRVA*AFPGLG
Trigger: TCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTCCCGCCGGGGTTCGTaGGCTCGCAGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHSRRGS*ARSCQG
Trigger: TCCCTGACAGCTGCGAGCCCACGAACCCCGGCGGGA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTCCCGCCGGGGTTCGTaGGCTCGCAGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKSRRGS*ARSCQG
Trigger: TCCCTGACAGCTGCGAGCCCACGAACCCCGGCGGGA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGTAACCAGCCCAAAATaGAGGAAGGCAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCVTSPK*RKAEVR
Trigger: TCTCACCTCTGCCTTCCTCCATTTTGGGCTGGTTAC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGGCGAGTCTCTCCGTCTaGGATCACGTAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALASLSV*DHVDTD
Trigger: ATCTGTGTCTACGTGATCCCAGACGGAGAGACTCGC...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGAGGCCTTCCCAAACCTaGACCACACCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGERPSQT*TTPGEK
Trigger: CTTCTCCCCTGGTGTGGTCCAGGTTTGGGAAGGCCT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGCAAGCCGTGTGGCCCTaGGTAGGTCACATCCCTAGT +
Preference number: 4 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLQAVWP*VGHIPS
Trigger: ACTAGGGATGTGACCTACCCAGGGCCACACGGCTTG...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 72 bp AGGAGAAGTCCTAGGCCTGCCCTGCTGGAGGCTCTGTaGTGTGGCTTAGAACCCCTTGATGTAGCAATAGGC +
Preference number: 4 (lower is better)
Translates to: RRSPRPALLEAL*CGLEPLDVAIG
Trigger: GCCTATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAGGGCAGGCCTAGGACTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCTGGCTTAGAACCCCTTaGTGTAGCAATAGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCWLRTP*CSNRPL
Trigger: TAGAGGCCTATTGCTACATCAAGGGGTTCTAAGCCA...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GGCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GKRIWDRGAKCHENNSCDGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...GTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAAC +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEPCVGE*AYFYPN
Trigger: GTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTCCCGACCCAGAGCGGTaGCTGGAATCTACGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTPDPER*LESTPG
Trigger: CCCGGGCGTAGATTCCAGTCACCGCTCTGGGTCGGG...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGGAGGAAGGCAGAGGTaGGAGGCTGCAACCTTAACC +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIGGRQR*EAATLT
Trigger: GGTTAAGGTTGCAGCCTCTCACCTCTGCCTTCCTCC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTACCAGATTGGCAGGATaGCACCCTCCTTGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGITRLAG*HPPCSP
Trigger: CGGACTGCAAGGAGGGTGTCATCCTGCCAATCTGGT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGAGACTCGTAGATGCTTaGTCTTGCGAGTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALRLVDA*SCESLR
Trigger: ACGGAGAGACTCGCAAGATCAAGCATCTACGAGTCT...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCCACCGTGCCCTCTGTaGACTCATAGTCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVPPCPL*THSQPL
Trigger: CAGGGGCTGACTATGAGTTCACAGAGGGCACGGTGG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACAGCTCCCCTCCCAGGTaGGGCCGCCTTCGGTACAAG +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHSSPPR*GRLRYK
Trigger: CTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGTTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGCGGCGGGGGATTCCTaGAGGAAGGGGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARAAGDS*RKGQEG
Trigger: GCCTTCCTGCCCCTTCCTGCAGGAATCCCCCGCCGC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGAGGAAGGTACGCGATaGCCCCGCCGCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIEEGTR*PRRPAP
Trigger: AGGCGCCGGGCGGCGGGGGCATCGCGTACCTTCCTC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGAGCAGTCGTTTATCTaGCACCCAGGCCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEEQSFI*HPGQKD
Trigger: GTCCTTCTGGCCTGGGTGGCAGATAAACGACTGCTC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTTCAGGCTCATCGGTGTaGACCTCGCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGISGSSV*TSLMLE
Trigger: CTCCAGCATGAGCGAGGTGCACACCGATGAGCCTGA...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTATCCCCTCCTCTGGCTaGTCCTCCTCTATGCGGACA +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIIPSSG*SSSMRT
Trigger: TGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGAT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGTGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGECQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCAGTGAGATGGGGAACTaGATCTTGATGGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCSEMGN*ILMEPR
Trigger: TCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACT...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATCCCGCCGGGGTTCGTaGGCTCGCAGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARSRRGS*ARSCQG
Trigger: TCCCTGACAGCTGCGAGCCCACGAACCCCGGCGGGA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGCCTCTCACTCTCACCTaGGACAGAGGTGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLPLTLT*DRGAKC
Trigger: GCATTTGGCACCTCTGTCCCAGGTGAGAGTGAGAGG...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGATGCAGGGTGAACTGTaGACTCAAGGAAGACGGGGC +
Preference number: 4 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLMQGEL*TQGRRG
Trigger: GCCCCGTCTTCCTTGAGTCCACAGTTCACCCTGCAT...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTCTTGACCCCTTCCTTTaGCTTATCCACCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGILDPFL*LIHPPG
Trigger: GCCAGGAGGGTGGATAAGTCAAAGGAAGGGGTCAAG...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR TCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGAGTACCCTGCGTGGGTaGGTGAGCTTATTTCTACCC +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGESTLRG*VSLFLP
Trigger: GGGTAGAAATAAGCTCACTCACCCACGCAGGGTACT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALSSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGCTTGGCACGTCCCCTaGGCCACCAGCCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVAWHVP*ATSLCS
Trigger: CGAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCCAGATCACCAGCAATaGACCCATGACCACACACCT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEPDHQQ*THDHTP
Trigger: AGGTGTGTGGTCATGGGTTCATTGCTGGTGATCTGG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCTCATCCTCATCCCCTaGTGCACTGACGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVLILIP*CTDGDG
Trigger: GCCATCACCGTCAGTGCAGCAGGGGATGAGGATGAG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCGGAGAAGGCCAGTGTaGCGGCCGACACGTGGAACT +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKRRRPV*RPTRGT
Trigger: AGTTCCACGTGTCGGCCGGCACACTGGCCTTCTCCG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCGGAGAAGGCCAGTGTaGCGGCCGACACGTGGAACT +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIRRRPV*RPTRGT
Trigger: AGTTCCACGTGTCGGCCGGCACACTGGCCTTCTCCG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTACCTGGGCTCGGGCTTaGGGTCGCGTCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFITWARA*GRVAWA
Trigger: AGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGCGGCGGGGGATTCCTaGAGGAAGGGGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAAAGDS*RKGQEG
Trigger: GCCTTCCTGCCCCTTCCTGCAGGAATCCCCCGCCGC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGCCACTGGCTTCTATTaGAGCACCAGTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEATGFY*STSCPP
Trigger: AGGAGGACAACTGGTGCTGCAATAGAAGCCAGTGGC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCTCCTCCCCGGATTCATCCTCATCCTCATCCCCTGCTGCACTGACGGTGATCTCGGTGTTTGTCTGTaGGGTACTTTTTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: PLLPGFILILIPCCTDGDLGVCL*GTFCAC
Trigger: ACATGCACAAAAAGTACCGCACAGACAAACACCGAG...ATCACCGTCAGTGCAGCAGGGGATGAGGATGAGGATGAATCCGGGGAGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCTCCTCCCCGGATTCATCCTCATCCTCATCCCCTGCTGCACTGACGGTGATTGTCGTCATCAATTATaGCCACGGAGAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLPGFILILIPCCTDGDCRHQL*PRRTPS
Trigger: AGAAGGAGTTCTCCGTGGGCATAATTGATGACGACA...ATCACCGTCAGTGCAGCAGGGGATGAGGATGAGGATGAATCCGGGGAGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTGCCCTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATAGCTGGCAAACGTATCTaGGACAGAGGTGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: PALLEALLCGLEPLDVAIAGKRI*DRGAKC
Trigger: GCATTTGGCACCTCTGTCCCAGATACGTTTGCCAGC...TATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGTCTGCATATACATCCTaGAGGGCAGCAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRSAYTS*RAAALL
Trigger: CAGCAAAGCTGCTGCCCTCCAGGATGTATATGCAGA...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGTGCCGGCCGACACGTaGAACTCCTGTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKVPADT*NSCPCR
Trigger: TCTGCAGGGACAGGAGTTCCACGTGTCGGCCGGCAC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCAAAGAGCCATGTTGTaGCGAGCTTGCAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVQRAML*RACSHG
Trigger: CCCGTGGCTGCAAGCTCGCCACAACATGGCTCTTTG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTTGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGICQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGAGGGACATATGGAATTaGGCAGAGAGGAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALRDIWN*AERRNP
Trigger: AGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCT...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTGCCCTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATAGATGGAGCCAAGAGGTaGCAGGAGAGCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: PALLEALLCGLEPLDVAIDGAKR*QESMCL
Trigger: TAGACACATGCTCTCCTGCCACCTCTTGGCTCCATC...TATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGAGTGAGATGGGGAACTaGATCTTGATGGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALSEMGN*ILMEPR
Trigger: TCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACT...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTGCGGTCGCGTCGCCTaGGCTTTCCCTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVACGRVA*AFPGLG
Trigger: TCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGACCCAGAGCGGTGACTaGAATCTACGCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRTQSGD*NLRPGE
Trigger: CTCTCCCGGGCGTAGATTCCAGTCACCGCTCTGGGT...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTCCCGCCGGGGTTCGTaGGCTCGCAGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVASRRGS*ARSCQG
Trigger: TCCCTGACAGCTGCGAGCCCACGAACCCCGGCGGGA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATAGGCCTCGCGAGTCTCTCCGTCTaGGATCACGTAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: LLEALLCGLEPLDVAIGLASLSV*DHVDTD
Trigger: ATCTGTGTCTACGTGATCCCAGACGGAGAGACTCGC...GAGGCCTATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGAGGCCTTCCCAAACCTaGACCACACCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVRPSQT*TTPGEK
Trigger: CTTCTCCCCTGGTGTGGTCCAGGTTTGGGAAGGCCT...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGCCTCACCGCCACCCTTaGCTGTCCCTTCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRPHRHP*LSLLLS
Trigger: GGACAGTAGAAGGGACAGCCAAGGGTGGCGGTGAGG...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGAGGGCAGCAGCTTTGCTGGCAAACGTATCTGGAAAAGGACAAAGACACATGGACCGCTGGCCTGCGCTaGGGTTTTGGAAAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: GGQQLCWQTYLEKDKDTWTAGLR*GFGKRF
Trigger: AAACCTCTTTCCAAAACCCCAGCGCAGGCCAGCGGT...CCATGTGTCTTTGTCCTTTTCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp GGAGGGCAGCAGCTTTGCTGGCAAACGTATCTGGAAAAGGACAAAGACACATGGCACTGGGTGAGGTGCTaGATTTTGGGGACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GGQQLCWQTYLEKDKDTWHWVRC*ILGTED
Trigger: GTCCTCTGTCCCCAAAATCCAGCACCTCACCCAGTG...CCATGTGTCTTTGTCCTTTTCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGTCGTGCGGGTGACATaGGAAAGCACAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKVVRVT*ESTGSR
Trigger: CCTGCTGCCTGTGCTTTCTCATGTCACCCGCACGAC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGTTCACCAAGGGCAATaGAGAAATTCTCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCVHQGQ*RNSLAF
Trigger: AAAGGCAAGAGAATTTCTTCATTGCCCTTGGTGAAC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000381269.6
CDS-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNLGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTCTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTLGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGACCAGATTGGCAGGATaGCACCCTCCTTGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRTRLAG*HPPCSP
Trigger: CGGACTGCAAGGAGGGTGTCATCCTGCCAATCTGGT...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTCCAGATCACCAGCAATaGACCCATGACCACACACCT +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIPDHQQ*THDHTP
Trigger: AGGTGTGTGGTCATGGGTTCATTGCTGGTGATCTGG...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CTGATGAGATTCAGCCTAACTTCCCTGCAGGAGGATGTGCTCTGTTTCTTTCTGGCCCAAAAAGCAGCTTaGGCTGGTGGGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: LMRFSLTSLQEDVLCFFLAQKAA*AGGLNP
Trigger: TGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGC...CAGAAAGAAACAGAGCACATCCTCCTGCAGGGAAGTTAGGCTGAATCTCATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGCTCATCCTCATCCCCTaGTGCACTGACGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRLILIP*CTDGDG
Trigger: GCCATCACCGTCAGTGCAGCAGGGGATGAGGATGAG...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCAGCTCCCCTCCCAGGTaGGGCCGCCTTCGGTACAAG +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVASSPPR*GRLRYK
Trigger: CTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCT...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGAGCTCCCCTCCCAGGTaGGGCCGCCTTCGGTACAAG +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKSSPPR*GRLRYK
Trigger: CTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCT...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCATGTTGTGGCGAGCTTaGAGCCACGGGGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIMLWRA*SHGGHQ
Trigger: TTGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACAT...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGCCTCTCCAGGGCAGTaGAGTCGGGAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIASPGQ*SRERSL
Trigger: CAGTGATCTCTCCCGACTGCACTGCCCTGGAGAGGC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGCCTCTCCAGGGCAGTaGAGTCGGGAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKASPGQ*SRERSL
Trigger: CAGTGATCTCTCCCGACTGCACTGCCCTGGAGAGGC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGACATCTCTTCTCTCCTaGCTCAGGTACAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALTSLLS*LRYKAK
Trigger: TTTGGCTTTGTACCTGAGGCAGGAGAGAAGAGATGT...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGCGGCGGGGGATTCCTaGAGGAAGGGGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIAAGDS*RKGQEG
Trigger: GCCTTCCTGCCCCTTCCTGCAGGAATCCCCCGCCGC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGATCCCCTCCTCTGGCTaGTCCTCCTCTATGCGGACA +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERIPSSG*SSSMRT
Trigger: TGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGAT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAACACCTGGGACAGAGGTaGCAAATGCCACGAAAACAA +
Preference number: 4 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQHLGQR*QMPRKQ
Trigger: TTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGGTG...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGATAATACCGCTGGCCTaGGCTGGGGTTTTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLIIPLA*AGVLER
Trigger: TCTTTCCAAAACCCCAGCGCAGGCCAGCGGTATTAT...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGCTGGCAAACGTATCTaGGACAGAGGTGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIAGKRI*DRGAKC
Trigger: GCATTTGGCACCTCTGTCCCAGATACGTTTGCCAGC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGTCTGCATATACATCCTaGAGGGCAGCAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGESAYTS*RAAALL
Trigger: CAGCAAAGCTGCTGCCCTCCAGGATGTATATGCAGA...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAAGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: DPFHTFNYIQRASAKATKAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGTGCCGGCCGACACGTaGAACTCCTGTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAVPADT*NSCPCR
Trigger: TCTGCAGGGACAGGAGTTCCACGTGTCGGCCGGCAC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCTAGGCCTGCCCTGCTaGAGGCTCTGTTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKLGLPC*RLCCVA
Trigger: AGCCACACAACAGAGCCTCCAGCAGGGCAGGCCTAG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCCCATCTCTTCTATTTaGCGGGTCTTCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEPISSI*RVFLQK
Trigger: CTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGGAGAGGCTGGTTTCTaGGCGAGCGGAGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIGEAGF*ASGELC
Trigger: GCAAAGCTCTCCGCTCGCCCAGAAACCAGCCTCTCC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGAGGCCTTCCCAAACCTaGACCACACCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERRPSQT*TTPGEK
Trigger: CTTCTCCCCTGGTGTGGTCCAGGTTTGGGAAGGCCT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCAGAAGGACACACACTaGAAAGAAGAAGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALQKDTH*KEEESE
Trigger: CTCACTCTCTTCTTCTTTCCAGTGTGTGTCCTTCTG...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGGCATCTCATCCACAGGCCTTCCTGGGATCATCCATCTAATTTCCAACCTTCTGGGATGCCAGCTCCCTaGCAGAAGTTCAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GHLIHRPSWDHPSNFQPSGMPAP*QKFRVQ
Trigger: CTGAACTCTGAACTTCTGCCAGGGAGCTGGCATCCC...AGAAGGTTGGAAATTAGATGGATGATCCCAGGAAGGCCTGTGGATGAGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGAGCAGGCTCAGCAAGTaGTGGTTCCCTTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERSRLSK*WFPFLP
Trigger: GGGAAGGAAAGGGAACCATCACTTGCTGAGCCTGCT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR TCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGAACAACAGCTGTGACTaGATCTTTGAGACCAATGGT +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALNNSCD*IFETNG
Trigger: ACCATTGGTCTCAAAGATTCAGTCACAGCTGTTGTT...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 4 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGAGTACCCTGCGTGGGTaGGTGAGCTTATTTCTACCC +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVSTLRG*VSLFLP
Trigger: GGGTAGAAATAAGCTCACTCACCCACGCAGGGTACT...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGGAGGAAGGCAGAGGTaGGAGGCTGCAACCTTAACC +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLGGRQR*EAATLT
Trigger: GGTTAAGGTTGCAGCCTCTCACCTCTGCCTTCCTCC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGGAGGAAGGCAGAGGTaGGAGGCTGCAACCTTAACC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIGGRQR*EAATLT
Trigger: GGTTAAGGTTGCAGCCTCTCACCTCTGCCTTCCTCC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACACCAGATTGGCAGGATaGCACCCTCCTTGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHTRLAG*HPPCSP
Trigger: CGGACTGCAAGGAGGGTGTCATCCTGCCAATCTGGT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGACCAGATTGGCAGGATaGCACCCTCCTTGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKTRLAG*HPPCSP
Trigger: CGGACTGCAAGGAGGGTGTCATCCTGCCAATCTGGT...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACCACCGTGCCCTCTGTaGACTCATAGTCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAPPCPL*THSQPL
Trigger: CAGGGGCTGACTATGAGTTCACAGAGGGCACGGTGG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATGTACCCCGGGCACCTaGTGTCCGCAGAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARCTPGT*CPQNLD
Trigger: GTCAAGGTTCTGCGGACATCAGGTGCCCGGGGTACA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATTGTACCCCGGGCACCTaGTGTCCGCAGAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNCTPGT*CPQNLD
Trigger: GTCAAGGTTCTGCGGACATCAGGTGCCCGGGGTACA...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCTCATCCTCATCCCCTaGTGCACTGACGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIILILIP*CTDGDG
Trigger: GCCATCACCGTCAGTGCAGCAGGGGATGAGGATGAG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCTCATCCTCATCCCCTaGTGCACTGACGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKLILIP*CTDGDG
Trigger: GCCATCACCGTCAGTGCAGCAGGGGATGAGGATGAG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGGCCAATGGAGGCGTCTaGATATACATCCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSEAPKPLTELSKEPGLVANGGV*IYILEG
Trigger: GCCCTCCAGGATGTATATGCAGACGCCTCCATTGGC...CACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATATGTTGTGGCGAGCTTaGAGCCACGGGGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNMLWRA*SHGGHQ
Trigger: TTGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACAT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCATTGTTCTGCCCTGTaGTTGGCACGTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIHCSAL*LARPLS
Trigger: GCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACCATTGTTCTGCCCTGTaGTTGGCACGTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHHCSAL*LARPLS
Trigger: GCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATG...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCATCCCCTCCTCTGGCTaGTCCTCCTCTATGCGGACA +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIIPSSG*SSSMRT
Trigger: TGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGAT...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGTGTATCACAGGGCCTTaGAGGGTGTTTGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRCITGP*RVFDFR
Trigger: TCTAAAGTCAAACACCCTGCAAGGCCCTGTGATACA...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAAGCTTGTCTTCCAGTATaGCCAAAAAGCAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQACLPV*PKSSLS
Trigger: GCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGCTGCCAGTTATCGTCTaGATGCCTCTAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLLPVIV*MPLAVI
Trigger: AATGACAGCTAGAGGCATCCAGACGATAACTGGCAG...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGATGGCCTCCATGAACTaGTCCCTCCAGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERMASMN*SLQEWV
Trigger: GACCCATTCCTGGAGGGACCAGTTCATGGAGGCCAT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGTGCCGGCCGACACGTaGAACTCCTGTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLVPADT*NSCPCR
Trigger: TCTGCAGGGACAGGAGTTCCACGTGTCGGCCGGCAC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGTGCCGGCCGACACGTaGAACTCCTGTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKVPADT*NSCPCR
Trigger: TCTGCAGGGACAGGAGTTCCACGTGTCGGCCGGCAC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCAAAGAGCCATGTTGTaGCGAGCTTGCAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKQRAML*RACSHG
Trigger: CCCGTGGCTGCAAGCTCGCCACAACATGGCTCTTTG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGAATAGGCCTCTAGTGTaGCAAAGAGTATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALNRPLV*QRVCRG
Trigger: TCCTCTACATACTCTTTGCCACACTAGAGGCCTATT...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGTCGGGAGAGATCACTaGTGGGGAAGTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKVGRDH*WGSALL
Trigger: GAGAAGGGCACTTCCCCACCAGTGATCTCTCCCGAC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGTGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERCQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGAGGGACATATGGAATTaGGCAGAGAGGAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGERDIWN*AERRNP
Trigger: AGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGATGGAGCCAAGAGGTaGCAGGAGAGCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVDGAKR*QESMCL
Trigger: TAGACACATGCTCTCCTGCCACCTCTTGGCTCCATC...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGCGGGGCAGCGCATCTaGAGCGCGGGGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHAGQRI*SAGSGR
Trigger: CCTCCCAGACCCCGCGCTCCAGATGCGCTGCCCCGC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTACTGTTGAATATTGCTaGAGGCATCCCCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGITVEYC*RHPLLW
Trigger: CCAGAGGAGGGGATGCCTCCAGCAATATTCAACAGT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR CAA 72 bp GAACTCAGAGAAAACAGTGAGATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGCAGGAGAGCATGTGTC +
Preference number: 4 (lower is better)
Translates to: ELRENSEMGNWI*MEPRGGRRACV
Trigger: GACACATGCTCTCCTGCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACTGTTTTCTCTGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTCTGGGGCTTAGGTCCTaGTGCTGCCTCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFILGLRS*CCLSRA
Trigger: TGCCCTGGAGAGGCAGCATCAGGACCTAAGCCCCAG...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGACTCAGAGAAAACAGTaGGATGGGGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGETQRKQ*DGELDL
Trigger: AAGATCCAGTTCCCCATCTCACTGTTTTCTCTGAGT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAAC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIPCVGE*AYFYPN
Trigger: GTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGISSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCCAGCAATGAACCCATaGCCACACACCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEPAMNP*PHTSIK
Trigger: TTTAATTGAGGTGTGTGGTCATGGGTTCATTGCTGG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTGCCCTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATACCAGCAATGAACCCATaGCCACACACCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: PALLEALLCGLEPLDVAIPAMNP*PHTSIK
Trigger: TTTAATTGAGGTGTGTGGTCATGGGTTCATTGCTGG...TATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGCCATCTCCACCAGCTaGTCTAAGTCCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLAISTS*SKSFSG
Trigger: CCCAGAGAAGGACTTAGATCAGCTGGTGGAGATGGC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGTATCACATTCAAAAGTaGAGATGCCTGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALYHIQK*RCLHGH
Trigger: ATGACCATGCAGGCATCTTCACTTTTGAATGTGATA...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACATCCACCCTCCTGGCTaGCAGTTATCGTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHIHPPG*QLSSGC
Trigger: GCATCCAGACGATAACTGGCAGCCAGGAGGGTGGAT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGACAGAGGTGCCAAATaGCACGAAAACAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIDRGAK*HENNSC
Trigger: ACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGGAGGGCAGCAGCTTTaGTGGCAAACGTATCTGGGA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLGGQQL*WQTYLG
Trigger: TCCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGCCAATGGAGGCGTCTaGATATACATCCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHANGGV*IYILEG
Trigger: GCCCTCCAGGATGTATATGCAGACGCCTCCATTGGC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCATGTTGTGGCGAGCTTaGAGCCACGGGGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAMLWRA*SHGGHQ
Trigger: TTGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACAT...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGCCTCTCCAGGGCAGTaGAGTCGGGAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAASPGQ*SRERSL
Trigger: CAGTGATCTCTCCCGACTGCACTGCCCTGGAGAGGC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGCCTCTCCAGGGCAGTaGAGTCGGGAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLASPGQ*SRERSL
Trigger: CAGTGATCTCTCCCGACTGCACTGCCCTGGAGAGGC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTGCCCTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATACTTTGCCCATTAAGCTaGCGGAAGAAGCCAAATCAA +
Preference number: 4 (lower is better)
Translates to: PALLEALLCGLEPLDVAILCPLS*RKKPNQ
Trigger: TTGATTTGGCTTCTTCCGGCAGCTTAATGGGCAAAG...TATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR GCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGCGAGCGGAGAGCTTTaGCCATTAAGCTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAASGEL*PLSCRK
Trigger: CTTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGCGAGCGGAGAGCTTTaGCCATTAAGCTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARASGEL*PLSCRK
Trigger: CTTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCATTGTTCTGCCCTGTaGTTGGCACGTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNHCSAL*LARPLS
Trigger: GCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGAGCAGTCGTTTATCTaGCACCCAGGCCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIEQSFI*HPGQKD
Trigger: GTCCTTCTGGCCTGGGTGGCAGATAAACGACTGCTC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTGTGCACCTCGCTCATaGTGGAGGCCTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIICAPRS*WRPSWL
Trigger: AAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGCACA...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATCAGGCTCATCGGTGTaGACCTCGCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARSGSSV*TSLMLE
Trigger: CTCCAGCATGAGCGAGGTGCACACCGATGAGCCTGA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGCTCATAGTCAGCCCCTaGATTGGCAGAACCATCCTC +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRLIVSP*IGRTIL
Trigger: GAGGATGGTTCTGCCAATGCAGGGGCTGACTATGAG...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GGGCATCTCATCCACAGGCCTTCCTGGGATCATCCATCTAATTTCCAACCTTCTGTTGTCTTGGCCAATTaGAAGGACTTGGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: GHLIHRPSWDHPSNFQPSVVLAN*KDLEMP
Trigger: GGGCATCTCCAAGTCCTTGCAATTGGCCAAGACAAC...AGAAGGTTGGAAATTAGATGGATGATCCCAGGAAGGCCTGTGGATGAGATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGACAGTTATTGAGCAATaGCTACTGATTGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRTVIEQ*LLIEHW
Trigger: CCAGTGCTCAATCAGTAGGCATTGCTCAATAACTGT...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp CTGATGAGATTCAGCCTAACTTCCCTGCAGGAGGATGTGCTCTGTTTCTTTCTGGGAGGGCAGCAGCTTTaGTGGCAAACGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: LMRFSLTSLQEDVLCFFLGGQQL*WQTYLE
Trigger: TTCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC...CAGAAAGAAACAGAGCACATCCTCCTGCAGGGAAGTTAGGCTGAATCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGACTTATCCACCCTCCTaGCTGCCAGTTATCGTCTGG +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRTYPPS*LPVIVW
Trigger: CCAGACGATAACTGGCAGCCAGGAGGGTGGATAAGT...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACATGGCCTCCATGAACTaGTCCCTCCAGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHMASMN*SLQEWV
Trigger: GACCCATTCCTGGAGGGACCAGTTCATGGAGGCCAT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGGGCAGCAGCTTTGCTaGCAAACGTATCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHGQQLC*QTYLGQ
Trigger: CTGTCCCAGATACGTTTGCCAGCAAAGCTGCTGCCC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACTTCTGCATATACATCCTaGAGGGCAGCAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ANVSGTEVPNATKTTAVTSAYTS*RAAALL
Trigger: CAGCAAAGCTGCTGCCCTCCAGGATGTATATGCAGA...AGTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGTGCCGGCCGACACGTaGAACTCCTGTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIVPADT*NSCPCR
Trigger: TCTGCAGGGACAGGAGTTCCACGTGTCGGCCGGCAC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACAAAGAGCCATGTTGTaGCGAGCTTGCAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAQRAML*RACSHG
Trigger: CCCGTGGCTGCAAGCTCGCCACAACATGGCTCTTTG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCTAGGCCTGCCCTGCTaGAGGCTCTGTTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVALGLPC*RLCCVA
Trigger: AGCCACACAACAGAGCCTCCAGCAGGGCAGGCCTAG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKCQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERLLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACGCGCGGAGAGGCTaGTTTCTGGGCGAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDDARRG*FLGERR
Trigger: TCTCCGCTCGCCCAGAAACCAGCCTCTCCGCGCGTC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGTCAATGCCCTTAGGGTaGTCACCCTCTGTCTCTATG +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVSMPLG*SPSVSM
Trigger: CATAGAGACAGAGGGTGACCACCCTAAGGGCATTGA...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGCACCTCGCTCATGCTaGAGGCCTTCTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHAPRSC*RPSWLV
Trigger: AACAAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAACCAAAGGTATCTGCCTaGCTTACCTCATTATTGCCA +
Preference number: 4 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQPKVSA*LTSLLP
Trigger: TGGCAATAATGAGGTAAGCCAGGCAGATACCTTTGG...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp GTTCAGAGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGGGACAGAGGACATGTTaGGGAACCATGATGGGGACA +
Preference number: 4 (lower is better)
Translates to: VQSSEAPKPLTELSKEPGGQRTC*GTMMGT
Trigger: TGTCCCCATCATGGTTCCCCAACATGTCCTCTGTCC...CCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACTCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp GGGCATCTCATCCACAGGCCTTCCTGGGATCATCCATCTAATTTCCAACCTTCTGTCACATCCCTAGTCTaGGCTTCCCATTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GHLIHRPSWDHPSNFQPSVTSLV*ASHSSS
Trigger: AGATGAGGAATGGGAAGCCCAGACTAGGGATGTGAC...AGAAGGTTGGAAATTAGATGGATGATCCCAGGAAGGCCTGTGGATGAGATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTACTCAGAGAAAACAGTaGGATGGGGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGITQRKQ*DGELDL
Trigger: AAGATCCAGTTCCCCATCTCACTGTTTTCTCTGAGT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVSSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCTTTCATATGTGACCTaGGGGACCAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERLSYVT*GTRRGE
Trigger: TTCACCTCTCCTGGTCCCTCAGGTCACATATGAAAG...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGGAACATGGGAGAAATaGGGAATTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIGTWEK*GIPVPI
Trigger: GATAGGAACTGGAATTCCTCATTTCTCCCATGTTCC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGCCATCTCCACCAGCTaGTCTAAGTCCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNAISTS*SKSFSG
Trigger: CCCAGAGAAGGACTTAGATCAGCTGGTGGAGATGGC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGCAAGGGAAGACTGTTaGATATTGCTGGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERAREDC*ILLEAS
Trigger: GGATGCCTCCAGCAATATTCAACAGTCTTCCCTTGC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGAAATGTGTAAATTGCTaGACACACATGGTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRKCVNC*THMVSV
Trigger: GACAGACACCATGTGTGTTCAGCAATTTACACATTT...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp AATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATTATTTGGGGACATGCAGGGTaGACTGTGGACTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: NCKDLEMPKGICLAYLIIWGHAG*TVDSRK
Trigger: CTTCCTTGAGTCCACAGTTCACCCTGCATGTCCCCA...AATAATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAATCATCTGCAGTGATCTaGAAGATTCTGAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQSSAVI*KILKGF
Trigger: AAAGCCCTTCAGAATCTTTCAGATCACTGCAGATGA...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGCCACTGGCTTCTATTaGAGCACCAGTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIATGFY*STSCPP
Trigger: AGGAGGACAACTGGTGCTGCAATAGAAGCCAGTGGC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGCAGAGGTGAGAGGCTaGAACCTTAACCACGCCATA +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHAEVRG*NLNHAI
Trigger: TATGGCGTGGTTAAGGTTGCAGCCTCTCACCTCTGC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGCAGAGGTGAGAGGCTaGAACCTTAACCACGCCATA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLAEVRG*NLNHAI
Trigger: TATGGCGTGGTTAAGGTTGCAGCCTCTCACCTCTGC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCATTGTTCTGCCCTGTaGTTGGCACGTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAHCSAL*LARPLS
Trigger: GCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGAGCAGTCGTTTATCTaGCACCCAGGCCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNEQSFI*HPGQKD
Trigger: GTCCTTCTGGCCTGGGTGGCAGATAAACGACTGCTC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCTTCTTGGCTTGTTCTaGTGCATGTTTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGELLGLF*CMFLQD
Trigger: ATCCTGAAGAAACATGCAGCAGAACAAGCCAAGAAG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTCAGGCTCATCGGTGTaGACCTCGCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVASGSSV*TSLMLE
Trigger: CTCCAGCATGAGCGAGGTGCACACCGATGAGCCTGA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGGCTGCTCCTCCTCTATaGGGACATTGCTCAACCTTA +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRAAPPL*GHCSTL
Trigger: TAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGC...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGCAGCCCTCAGTAAGGGAAGTTTaGCATCCCATAATATCTCCC +
Preference number: 4 (lower is better)
Translates to: EAPKPLTELSKEPGLVQPSVREV*HPIISP
Trigger: GGGAGATATTATGGGATGGCAAACTTCCCTTACTGA...GGGCTGCACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTATGGCCTCCATGAACTaGTCCCTCCAGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTMASMN*SLQEWV
Trigger: GACCCATTCCTGGAGGGACCAGTTCATGGAGGCCAT...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGCTGGCAAACGTATCTaGGACAGAGGTGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKAGKRI*DRGAKC
Trigger: GCATTTGGCACCTCTGTCCCAGATACGTTTGCCAGC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGGGCAGCAGCTTTGCTaGCAAACGTATCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTGQQLC*QTYLGQ
Trigger: CTGTCCCAGATACGTTTGCCAGCAAAGCTGCTGCCC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TCCGCTCCTTTCTGTTTGTCTCTGAGTGTTCCTAAGAAAAAGAAAGAGTATGTAGTGCCGGCCGACACGTaGAACTCCTGTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SAPFCLSLSVPKKKKEYVVPADT*NSCPCR
Trigger: TCTGCAGGGACAGGAGTTCCACGTGTCGGCCGGCAC...TACATACTCTTTCTTTTTCTTAGGAACACTCAGAGACAAACAGAAAGGAGCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTCTAGGCCTGCCCTGCTaGAGGCTCTGTTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFILGLPC*RLCCVA
Trigger: AGCCACACAACAGAGCCTCCAGCAGGGCAGGCCTAG...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNEREMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLLLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIILLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGCGAGTCTCTCCGTCTaGGATCACGTAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIASLSV*DHVDTD
Trigger: ATCTGTGTCTACGTGATCCCAGACGGAGAGACTCGC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGAGGCCTTCCCAAACCTaGACCACACCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVRPSQT*TTPGEK
Trigger: CTTCTCCCCTGGTGTGGTCCAGGTTTGGGAAGGCCT...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTCAGAAGGACACACACTaGAAAGAAGAAGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIQKDTH*KEEESE
Trigger: CTCACTCTCTTCTTCTTTCCAGTGTGTGTCCTTCTG...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGTCAATGCCCTTAGGGTaGTCACCCTCTGTCTCTATG +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERSMPLG*SPSVSM
Trigger: CATAGAGACAGAGGGTGACCACCCTAAGGGCATTGA...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGAAAGAGCATAGTAATTaGCCATCTCCACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEKEHSN*PSPPAD
Trigger: ATCAGCTGGTGGAGATGGCCAATTACTATGCTCTTT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGCACCTCGCTCATGCTaGAGGCCTTCTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNAPRSC*RPSWLV
Trigger: AACAAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTTGTAGTCCACATACATaGTCTTTGACATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGICSPHT*SLTCLP
Trigger: GGGGAGACATGTCAAAGACCATGTATGTGGACTACA...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAGTCAGCCCCTGCATTaGCAGAACCATCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRSQPLH*QNHPLF
Trigger: AAACAGAGGATGGTTCTGCCAATGCAGGGGCTGACT...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGACGGAGAACTCCTTCTaGGTCTCTCCTGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLTENSF*VSPGFR
Trigger: TCTGAAGCCAGGAGAGACCCAGAAGGAGTTCTCCGT...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGACTGTTGAATATTGCTaGAGGCATCCCCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRTVEYC*RHPLLW
Trigger: CCAGAGGAGGGGATGCCTCCAGCAATATTCAACAGT...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CTGATGAGATTCAGCCTAACTTCCCTGCAGGAGGATGTGCTCTGTTTCTTTCTGGGGCAGCAGCTTTGCTaGCAAACGTATCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LMRFSLTSLQEDVLCFFLGQQLC*QTYLEK
Trigger: CTTTTCCAGATACGTTTGCCAGCAAAGCTGCTGCCC...CAGAAAGAAACAGAGCACATCCTCCTGCAGGGAAGTTAGGCTGAATCTCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGTGGCTTAGAACCCCTTaGTGTAGCAATAGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERWLRTP*CSNRPL
Trigger: TAGAGGCCTATTGCTACATCAAGGGGTTCTAAGCCA...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGTGGCTTAGAACCCCTTaGTGTAGCAATAGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRWLRTP*CSNRPL
Trigger: TAGAGGCCTATTGCTACATCAAGGGGTTCTAAGCCA...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCCTCCATTGTTTGATTaGTTAAGACTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEPPLFD*LRLCPF
Trigger: GAAAGGGCAAAGTCTTAATCAATCAAACAATGGAGG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCTTTCATATGTGACCTaGGGGACCAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIILSYVT*GTRRGE
Trigger: TTCACCTCTCCTGGTCCCTCAGGTCACATATGAAAG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCCTTCCCACATTCGTTaGGAAAAGGTCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLPSHIR*EKVCRA
Trigger: TGCCCTACAGACCTTTTCTCAACGAATGTGGGAAGG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGCAAGGGAAGACTGTTaGATATTGCTGGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKAREDC*ILLEAS
Trigger: GGATGCCTCCAGCAATATTCAACAGTCTTCCCTTGC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTGTACCCCGGGCACCTaGTGTCCGCAGAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDCTPGT*CPQNLD
Trigger: GTCAAGGTTCTGCGGACATCAGGTGCCCGGGGTACA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAAATCCACCCTCCTGGCTaGCAGTTATCGTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: DPFHTFNYIQRASAKATKIHPPG*QLSSGC
Trigger: GCATCCAGACGATAACTGGCAGCCAGGAGGGTGGAT...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGGAGGGCAGCAGCTTTaGTGGCAAACGTATCTGGGA +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKGGQQL*WQTYLG
Trigger: TCCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGCCAATGGAGGCGTCTaGATATACATCCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVANGGV*IYILEG
Trigger: GCCCTCCAGGATGTATATGCAGACGCCTCCATTGGC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGCCAATGGAGGCGTCTaGATATACATCCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLANGGV*IYILEG
Trigger: GCCCTCCAGGATGTATATGCAGACGCCTCCATTGGC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATAGCTCCCCTCCCAGGTaGGGCCGCCTTCGGTACAAG +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHSSPPR*GRLRYK
Trigger: CTTGTACCGAAGGCGGCCGCACCTGGGAGGGGAGCT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGCCTCTCCAGGGCAGTaGAGTCGGGAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDASPGQ*SRERSL
Trigger: CAGTGATCTCTCCCGACTGCACTGCCCTGGAGAGGC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGCCACTGGCTTCTATTaGAGCACCAGTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAATGFY*STSCPP
Trigger: AGGAGGACAACTGGTGCTGCAATAGAAGCCAGTGGC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGCAGGACTCATTGTTCTaGCCTGTGCTTGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVQDSLF*PVLGTS
Trigger: GGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTG...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCTCGGTGTTTGTCTGTaGGGTACTTTTTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVLGVCL*GTFCAC
Trigger: ACATGCACAAAAAGTACCGCACAGACAAACACCGAG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACTCATAGTCAGCCCCTaGATTGGCAGAACCATCCTC +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGALIVSP*IGRTIL
Trigger: GAGGATGGTTCTGCCAATGCAGGGGCTGACTATGAG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACTCATAGTCAGCCCCTaGATTGGCAGAACCATCCTC +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARLIVSP*IGRTIL
Trigger: GAGGATGGTTCTGCCAATGCAGGGGCTGACTATGAG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTCCTCTATGCGGACATTaGTCAACCTTACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIPLCGH*STLQRS
Trigger: ACTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGG...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGCTGCTCCTCCTCTATaGGGACATTGCTCAACCTTA +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHAAPPL*GHCSTL
Trigger: TAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGCTGCTCCTCCTCTATaGGGACATTGCTCAACCTTA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLAAPPL*GHCSTL
Trigger: TAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGAAAAGTGAAGATGCCTaGATGGTCATCATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEKSEDA*MVIIQD
Trigger: ATCTTGGATGATGACCATGCAGGCATCTTCACTTTT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GGAGGGCAGCAGCTTTGCTGGCAAACGTATCTGGAAAAGGACAAAGACACATGGATGCCCAAAGGTATCTaGCTGGCTTACCTCATTATT +
Preference number: 4 (lower is better)
Translates to: GGQQLCWQTYLEKDKDTWMPKGI*LAYLII
Trigger: AATAATGAGGTAAGCCAGGCAGATACCTTTGGGCAT...CCATGTGTCTTTGTCCTTTTCCAGATACGTTTGCCAGCAAAGCTGCTGCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGCTGGCAAACGTATCTaGGACAGAGGTGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARAGKRI*DRGAKC
Trigger: GCATTTGGCACCTCTGTCCCAGATACGTTTGCCAGC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGGGCAGCAGCTTTGCTaGCAAACGTATCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAGQQLC*QTYLGQ
Trigger: CTGTCCCAGATACGTTTGCCAGCAAAGCTGCTGCCC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGTCTGCATATACATCCTaGAGGGCAGCAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLSAYTS*RAAALL
Trigger: CAGCAAAGCTGCTGCCCTCCAGGATGTATATGCAGA...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTCTGCATATACATCCTaGAGGGCAGCAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIISAYTS*RAAALL
Trigger: CAGCAAAGCTGCTGCCCTCCAGGATGTATATGCAGA...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGCAGAGCCCAGTAGATaGCGGCCACGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEAEPSR*RPRTRP
Trigger: TGGCCTGGTCCGTGGCCGCCATCTACTGGGCTCTGC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKEMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHEMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGATGGAGCCAAGAGGTaGCAGGAGAGCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTDGAKR*QESMCL
Trigger: TAGACACATGCTCTCCTGCCACCTCTTGGCTCCATC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAGTGAGATGGGGAACTaGATCTTGATGGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRSEMGN*ILMEPR
Trigger: TCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACT...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGAGTGAGATGGGGAACTaGATCTTGATGGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERSEMGN*ILMEPR
Trigger: TCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGGAGAGGCTGGTTTCTaGGCGAGCGGAGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDGEAGF*ASGELC
Trigger: GCAAAGCTCTCCGCTCGCCCAGAAACCAGCCTCTCC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGTAACCAGCCCAAAATaGAGGAAGGCAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLVTSPK*RKAEVR
Trigger: TCTCACCTCTGCCTTCCTCCATTTTGGGCTGGTTAC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCAGAAGGACACACACTaGAAAGAAGAAGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVQKDTH*KEEESE
Trigger: CTCACTCTCTTCTTCTTTCCAGTGTGTGTCCTTCTG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTGCTGGAGGCCTTCTTaGCTTGTTCTGCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHCWRPS*LVLLHV
Trigger: AACATGCAGCAGAACAAGCCAAGAAGGCCTCCAGCA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAACGGAGAACTCCTTCTaGGTCTCTCCTGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARTENSF*VSPGFR
Trigger: TCTGAAGCCAGGAGAGACCCAGAAGGAGTTCTCCGT...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGAGGAAAGATTTCCCTTaGCCCAGCCAGAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSEAPKPLTELSKEPGLVRKDFP*PSQKSP
Trigger: AGGACTTTTCTGGCTGGGCCAAGGGAAATCTTTCCT...CACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCCTGTCTGTCACATCTaGTATTCCACGTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLPVCHI*YSTFHP
Trigger: TGGATGGAACGTGGAATATCAGATGTGACAGACAGG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000356921.7
CDS-3UTR TCA 90 bp GCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACTAACAACAGCTGTGACTaGATCTTTGAGACCAATGGT +
Preference number: 4 (lower is better)
Translates to: ANVSGTEVPNATKTTAVTNNSCD*IFETNG
Trigger: ACCATTGGTCTCAAAGATTCAGTCACAGCTGTTGTT...AGTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGTGGCTTAGAACCCCTTaGTGTAGCAATAGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLWLRTP*CSNRPL
Trigger: TAGAGGCCTATTGCTACATCAAGGGGTTCTAAGCCA...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGACTCAGAGAAAACAGTaGGATGGGGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRTQRKQ*DGELDL
Trigger: AAGATCCAGTTCCCCATCTCACTGTTTTCTCTGAGT...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGAGTACCCTGCGTGGGTaGGTGAGCTTATTTCTACCC +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLSTLRG*VSLFLP
Trigger: GGGTAGAAATAAGCTCACTCACCCACGCAGGGTACT...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKSSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGTACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACTTTCATATGTGACCTaGGGGACCAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGALSYVT*GTRRGE
Trigger: TTCACCTCTCCTGGTCCCTCAGGTCACATATGAAAG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTCCTTCCCACATTCGTTaGGAAAAGGTCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTPSHIR*EKVCRA
Trigger: TGCCCTACAGACCTTTTCTCAACGAATGTGGGAAGG...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGTGTCAACATAGCTTATaGCATGAGCACTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGECQHSL*HEHCFF
Trigger: AAAGAAACAGTGCTCATGTCATAAGCTATGTTGACA...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCCACAAAATAGACAATaGCCCTGGCAATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIPQNRQ*PWQSCP
Trigger: GGGACAAGATTGCCAGGGTCATTGTCTATTTTGTGG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCCACAAAATAGACAATaGCCCTGGCAATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKPQNRQ*PWQSCP
Trigger: GGGACAAGATTGCCAGGGTCATTGTCTATTTTGTGG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGTCACCTCCCTCTCTTaGGAGGTGATGACTTCAATA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKVTSLS*EVMTSI
Trigger: TATTGAAGTCATCACCTCTCAAGAGAGGGAGGTGAC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGTCACCTCCCTCTCTTaGGAGGTGATGACTTCAATA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLVTSLS*EVMTSI
Trigger: TATTGAAGTCATCACCTCTCAAGAGAGGGAGGTGAC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGCCAGCAATGAACCCATaGCCACACACCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRPAMNP*PHTSIK
Trigger: TTTAATTGAGGTGTGTGGTCATGGGTTCATTGCTGG...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGCCAGATCACCAGCAATaGACCCATGACCACACACCT +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLPDHQQ*THDHTP
Trigger: AGGTGTGTGGTCATGGGTTCATTGCTGGTGATCTGG...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACTCGTAGATGCTTaGTCTTGCGAGTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGARLVDA*SCESLR
Trigger: ACGGAGAGACTCGCAAGATCAAGCATCTACGAGTCT...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGCAAGGGAAGACTGTTaGATATTGCTGGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAAREDC*ILLEAS
Trigger: GGATGCCTCCAGCAATATTCAACAGTCTTCCCTTGC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGTCTGTCACATCTCTTTaGGCTTCCGTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSEAPKPLTELSKEPGLVSVTSL*ASVSSA
Trigger: TGCTGAAGAAACGGAAGCTCAAAGAGATGTGACAGA...CACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAACAGTTTCTTTGTCTGTaGAGTGGGGATAATAACTTA +
Preference number: 4 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQQFLCL*SGDNNL
Trigger: TAAGTTATTATCCCCACTTCACAGACAAAGAAACTG...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAATTTAATTACAGTAGTTaGGAGTTGCCTCCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQFNYSS*ELPPSV
Trigger: TACTGAAGGAGGCAACTCTCAACTACTGTAATTAAA...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTATCCACCCTCCTGGCTaGCAGTTATCGTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIIHPPG*QLSSGC
Trigger: GCATCCAGACGATAACTGGCAGCCAGGAGGGTGGAT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216568.11
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTGGCTTTCCCATCTCTaGTATCCTCTTGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLWLSHL*YPLGLL
Trigger: GAGGAGGCCAAGAGGATAGCAGAGATGGGAAAGCCA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGTGGCTTTCCCATCTCTaGTATCCTCTTGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVWLSHL*YPLGLL
Trigger: GAGGAGGCCAAGAGGATAGCAGAGATGGGAAAGCCA...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTACTCATCCTCATCCCCTaGTGCACTGACGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLLILIP*CTDGDG
Trigger: GCCATCACCGTCAGTGCAGCAGGGGATGAGGATGAG...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGACAGAGGTGCCAAATaGCACGAAAACAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLDRGAK*HENNSC
Trigger: ACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCGGAGAAGGCCAGTGTaGCGGCCGACACGTGGAACT +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIERRRPV*RPTRGT
Trigger: AGTTCCACGTGTCGGCCGGCACACTGGCCTTCTCCG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATTTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGACATCTCTTCTCTCCTaGCTCAGGTACAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERTSLLS*LRYKAK
Trigger: TTTGGCTTTGTACCTGAGGCAGGAGAGAAGAGATGT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGCCACTGGCTTCTATTaGAGCACCAGTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLATGFY*STSCPP
Trigger: AGGAGGACAACTGGTGCTGCAATAGAAGCCAGTGGC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGCAGAGGTGAGAGGCTaGAACCTTAACCACGCCATA +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLAEVRG*NLNHAI
Trigger: TATGGCGTGGTTAAGGTTGCAGCCTCTCACCTCTGC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGTTTCTTCAGGATATTaGCTGCACCAGTCATCATAC +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVVSSGY*LHQSSY
Trigger: GTATGATGACTGGTGCAGGCAATATCCTGAAGAAAC...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCCTCTATGCGGACATTaGTCAACCTTACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVPLCGH*STLQRS
Trigger: ACTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACTCCTCTATGCGGACATTaGTCAACCTTACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: ANVSGTEVPNATKTTAVTPLCGH*STLQRS
Trigger: ACTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGG...AGTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGGGCAGCAGCTTTGCTaGCAAACGTATCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIGQQLC*QTYLGQ
Trigger: CTGTCCCAGATACGTTTGCCAGCAAAGCTGCTGCCC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGAATAGGCCTCTAGTGTaGCAAAGAGTATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVNRPLV*QRVCRG
Trigger: TCCTCTACATACTCTTTGCCACACTAGAGGCCTATT...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTTGCCAGGGCCTAAGTTaGGTGAAGTTCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFICQGLS*VKFLGL
Trigger: AAGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCA...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCAGGGACATATGGAATTaGGCAGAGAGGAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIRDIWN*AERRNP
Trigger: AGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCT...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGATGGAGCCAAGAGGTaGCAGGAGAGCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKDGAKR*QESMCL
Trigger: TAGACACATGCTCTCCTGCCACCTCTTGGCTCCATC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGAGTGAGATGGGGAACTaGATCTTGATGGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLSEMGN*ILMEPR
Trigger: TCTTGGCTCCATCAAGATCCAGTTCCCCATCTCACT...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGAGAATTGGAAAGGCTTaGGCAAAGAGGGACAATTGC +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERRIGKA*AKRDNC
Trigger: GCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCCATCTCTTCTATTTaGCGGGTCTTCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNPISSI*RVFLQK
Trigger: CTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATACGAGACTTAGCCACTaGCTTCTATTGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNTRLSH*LLLQHQ
Trigger: CTGGTGCTGCAATAGAAGCCAGTGGCTAAGTCTCGT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGCGAGTCTCTCCGTCTaGGATCACGTAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLASLSV*DHVDTD
Trigger: ATCTGTGTCTACGTGATCCCAGACGGAGAGACTCGC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTCAATGCCCTTAGGGTaGTCACCCTCTGTCTCTATG +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTSMPLG*SPSVSM
Trigger: CATAGAGACAGAGGGTGACCACCCTAAGGGCATTGA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCAGTCATCATACGAGTaGCTTGGATACGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLQSSYE*LGYGRR
Trigger: CCTTCTACCGTATCCAAGCCACTCGTATGATGACTG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATTGCTGGAGGCCTTCTTaGCTTGTTCTGCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNCWRPS*LVLLHV
Trigger: AACATGCAGCAGAACAAGCCAAGAAGGCCTCCAGCA...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAAGTCAGCCCCTGCATTaGCAGAACCATCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARSQPLH*QNHPLF
Trigger: AAACAGAGGATGGTTCTGCCAATGCAGGGGCTGACT...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATGCTCTGTTTCTTTCTaGGGCAACTGGGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: DPFHTFNYIQRASAKATKCSVSF*GNWDAS
Trigger: GCTGGCATCCCAGTTGCCCCAGAAAGAAACAGAGCA...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCTTGACCCCTTCCTTTaGCTTATCCACCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDLDPFL*LIHPPG
Trigger: GCCAGGAGGGTGGATAAGTCAAAGGAAGGGGTCAAG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216568.11
CDS-3UTR TCA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTACTTGACCCCTTCCTTTaGCTTATCCACCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLLDPFL*LIHPPG
Trigger: GCCAGGAGGGTGGATAAGTCAAAGGAAGGGGTCAAG...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCTGTCTGTCACATCTaGTATTCCACGTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNPVCHI*YSTFHP
Trigger: TGGATGGAACGTGGAATATCAGATGTGACAGACAGG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000356921.7
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGCTTTCATATGTGACCTaGGGGACCAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVLSYVT*GTRRGE
Trigger: TTCACCTCTCCTGGTCCCTCAGGTCACATATGAAAG...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTAAATGCTTTCATATGTaGCCTGAGGGACCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTKCFHM*PEGPGE
Trigger: CTCTCCTGGTCCCTCAGGTCACATATGAAAGCATTT...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAAATGCTTTCATATGTaGCCTGAGGGACCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAKCFHM*PEGPGE
Trigger: CTCTCCTGGTCCCTCAGGTCACATATGAAAGCATTT...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATAAATGCTTTCATATGTaGCCTGAGGGACCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNKCFHM*PEGPGE
Trigger: CTCTCCTGGTCCCTCAGGTCACATATGAAAGCATTT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGGAACATGGGAGAAATaGGGAATTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLGTWEK*GIPVPI
Trigger: GATAGGAACTGGAATTCCTCATTTCTCCCATGTTCC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGGCTCCAAGGGATTATaGCAACTAAGATTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERGSKGL*QLRFLL
Trigger: TAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCCTTCCCACATTCGTTaGGAAAAGGTCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKPSHIR*EKVCRA
Trigger: TGCCCTACAGACCTTTTCTCAACGAATGTGGGAAGG...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACCACAAAATAGACAATaGCCCTGGCAATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAPQNRQ*PWQSCP
Trigger: GGGACAAGATTGCCAGGGTCATTGTCTATTTTGTGG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGTCACCTCCCTCTCTTaGGAGGTGATGACTTCAATA +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAVTSLS*EVMTSI
Trigger: TATTGAAGTCATCACCTCTCAAGAGAGGGAGGTGAC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGAGACTCGTAGATGCTTaGTCTTGCGAGTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKRLVDA*SCESLR
Trigger: ACGGAGAGACTCGCAAGATCAAGCATCTACGAGTCT...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGCCATCTCCACCAGCTaGTCTAAGTCCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDAISTS*SKSFSG
Trigger: CCCAGAGAAGGACTTAGATCAGCTGGTGGAGATGGC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGCAAGGGAAGACTGTTaGATATTGCTGGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKAREDC*ILLEAS
Trigger: GGATGCCTCCAGCAATATTCAACAGTCTTCCCTTGC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTCTGTCACATCTCTTTaGGCTTCCGTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKSVTSL*ASVSSA
Trigger: TGCTGAAGAAACGGAAGCTCAAAGAGATGTGACAGA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394330.6
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTATCTGGGACAGAGGTaGCAAATGCCACGAAAACAA +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIYLGQR*QMPRKQ
Trigger: TTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATA...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTATCTGGGACAGAGGTaGCAAATGCCACGAAAACAA +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHYLGQR*QMPRKQ
Trigger: TTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGTCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVSLVGK*PSLRRS
Trigger: ACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGA...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVASLVGK*PSLRRS
Trigger: ACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGTTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGACATCTCTTCTCTCCTaGCTCAGGTACAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKTSLLS*LRYKAK
Trigger: TTTGGCTTTGTACCTGAGGCAGGAGAGAAGAGATGT...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGAACATGTTGAAGGCTaGACTCCCTACAATGGTAGA +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIEHVEG*TPYNGR
Trigger: TCTACCATTGTAGGGAGTGCAGCCTTCAACATGTTC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGAACATGTTGAAGGCTaGACTCCCTACAATGGTAGA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKEHVEG*TPYNGR
Trigger: TCTACCATTGTAGGGAGTGCAGCCTTCAACATGTTC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGAACATGTTGAAGGCTaGACTCCCTACAATGGTAGA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLEHVEG*TPYNGR
Trigger: TCTACCATTGTAGGGAGTGCAGCCTTCAACATGTTC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGAAGAAGACTCGTAGATaGTTGATCTTGCGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERKKTRR*LILRVS
Trigger: AGAGACTCGCAAGATCAAGCATCTACGAGTCTTCTT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAAGAAGACTCGTAGATaGTTGATCTTGCGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: MELGREEKPCFQRNERQRKKTRR*LILRVS
Trigger: AGAGACTCGCAAGATCAAGCATCTACGAGTCTTCTT...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCTCGGTGTTTGTCTGTaGGGTACTTTTTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKLGVCL*GTFCAC
Trigger: ACATGCACAAAAAGTACCGCACAGACAAACACCGAG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTGTGCACCTCGCTCATaGTGGAGGCCTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDCAPRS*WRPSWL
Trigger: AAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGCACA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTGTCGTCATCAATTATaGCCACGGAGAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHCRHQL*PRRTPS
Trigger: AGAAGGAGTTCTCCGTGGGCATAATTGATGACGACA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGCTGCTCCTCCTCTATaGGGACATTGCTCAACCTTA +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVAAPPL*GHCSTL
Trigger: TAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTCTGCCAGTTATCGTCTaGATGCCTCTAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTLPVIV*MPLAVI
Trigger: AATGACAGCTAGAGGCATCCAGACGATAACTGGCAG...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216568.11
CDS-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACTGCCAGTTATCGTCTaGATGCCTCTAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARLPVIV*MPLAVI
Trigger: AATGACAGCTAGAGGCATCCAGACGATAACTGGCAG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000394330.6
CDS-3UTR CCA 90 bp CTGTTTGTGGTCTACTCACATAATGTGGAGGTTAAGAAATTGGACCACTTACTTATGGCCTCCATGAACTaGTCCCTCCAGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: LFVVYSHNVEVKKLDHLLMASMN*SLQEWV
Trigger: GACCCATTCCTGGAGGGACCAGTTCATGGAGGCCAT...AAGTAAGTGGTCCAATTTCTTAACCTCCACATTATGTGAGTAGACCACAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGGGCAGCAGCTTTGCTaGCAAACGTATCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDGQQLC*QTYLGQ
Trigger: CTGTCCCAGATACGTTTGCCAGCAAAGCTGCTGCCC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGAGATGGGGTGGAGGTaGATTTGTTGCTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKEMGWR*ICCCCL
Trigger: CAAGCAACAGCAACAAATCCACCTCCACCCCATCTC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACAGAATTGGAAAGGCTTaGGCAAAGAGGGACAATTGC +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHRIGKA*AKRDNC
Trigger: GCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGCCCATCTCTTCTATTTaGCGGGTCTTCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVPISSI*RVFLQK
Trigger: CTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGG...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGACGAGACTTAGCCACTaGCTTCTATTGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVTRLSH*LLLQHQ
Trigger: CTGGTGCTGCAATAGAAGCCAGTGGCTAAGTCTCGT...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGTAACCAGCCCAAAATaGAGGAAGGCAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAVTSPK*RKAEVR
Trigger: TCTCACCTCTGCCTTCCTCCATTTTGGGCTGGTTAC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCAGAAGGACACACACTaGAAAGAAGAAGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIQKDTH*KEEESE
Trigger: CTCACTCTCTTCTTCTTTCCAGTGTGTGTCCTTCTG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACAGTCATCATACGAGTaGCTTGGATACGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAQSSYE*LGYGRR
Trigger: CCTTCTACCGTATCCAAGCCACTCGTATGATGACTG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACAGTCATCATACGAGTaGCTTGGATACGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARQSSYE*LGYGRR
Trigger: CCTTCTACCGTATCCAAGCCACTCGTATGATGACTG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGTGTAGTCCACATACATaGTCTTTGACATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLCSPHT*SLTCLP
Trigger: GGGGAGACATGTCAAAGACCATGTATGTGGACTACA...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTGTAGTCCACATACATaGTCTTTGACATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIICSPHT*SLTCLP
Trigger: GGGGAGACATGTCAAAGACCATGTATGTGGACTACA...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTACGGAGAACTCCTTCTaGGTCTCTCCTGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFITENSF*VSPGFR
Trigger: TCTGAAGCCAGGAGAGACCCAGAAGGAGTTCTCCGT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGACTGTTGAATATTGCTaGAGGCATCCCCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKTVEYC*RHPLLW
Trigger: CCAGAGGAGGGGATGCCTCCAGCAATATTCAACAGT...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR CAA 72 bp GAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCTATTTTTGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: EGLYPFCSSSSP*SSHTIPIFVPS
Trigger: AGATGGGACAAAAATAGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGAACAAAAGGGATACAGGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
3UTR CAA 72 bp AAAGCCTCAAATGTTGTTAGCTGTTGTCTTGGCCAATaGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCT +
Preference number: 4 (lower is better)
Translates to: KASNVVSCCLGQ*QGLGDAQRYLP
Trigger: AGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCCAAGACAACAGCTAACAACATTTGAGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTGGCTTAGAACCCCTTaGTGTAGCAATAGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAWLRTP*CSNRPL
Trigger: TAGAGGCCTATTGCTACATCAAGGGGTTCTAAGCCA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGGAGGCGAAAGGCTCTaGCCTTTGCTTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEGGERL*PLLWVR
Trigger: CCTGACCCAAAGCAAAGGTCAGAGCCTTTCGCCTCC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAACTCAGAGAAAACAGTaGGATGGGGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARTQRKQ*DGELDL
Trigger: AAGATCCAGTTCCCCATCTCACTGTTTTCTCTGAGT...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVASSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTCCTCCTGCTCCAGTTaGAGCTCCTGTAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLSSCSS*SSCKIF
Trigger: AAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCATACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTCTTTCATATGTGACCTaGGGGACCAGGAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFILSYVT*GTRRGE
Trigger: TTCACCTCTCCTGGTCCCTCAGGTCACATATGAAAG...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGAAATGCTTTCATATGTaGCCTGAGGGACCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVKCFHM*PEGPGE
Trigger: CTCTCCTGGTCCCTCAGGTCACATATGAAAGCATTT...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGGAGGAAGGCAGAGGTaGGAGGCTGCAACCTTAACC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEGGRQR*EAATLT
Trigger: GGTTAAGGTTGCAGCCTCTCACCTCTGCCTTCCTCC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGTCACCTCCCTCTCTTaGGAGGTGATGACTTCAATA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAVTSLS*EVMTSI
Trigger: TATTGAAGTCATCACCTCTCAAGAGAGGGAGGTGAC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTAACAGGAGCGCTTTCTaGAAACTCATATCCACCATG +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTNRSAF*KLISTM
Trigger: CATGGTGGATATGAGTTTTCAGAAAGCGCTCCTGTT...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357887.7
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATCTCATCCTCATCCCCTaGTGCACTGACGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHLILIP*CTDGDG
Trigger: GCCATCACCGTCAGTGCAGCAGGGGATGAGGATGAG...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGACAGAGGTGCCAAATaGCACGAAAACAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLDRGAK*HENNSC
Trigger: ACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTATCTGGGACAGAGGTaGCAAATGCCACGAAAACAA +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTYLGQR*QMPRKQ
Trigger: TTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATATCTGGGACAGAGGTaGCAAATGCCACGAAAACAA +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARYLGQR*QMPRKQ
Trigger: TTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTTCACTGGTGGGGAAGTaGCCTTCTCTTAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFISLVGK*PSLRRS
Trigger: ACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGA...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGATGACTTCAATAGATaGCATGAAGCGGTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLDDFNR*HEAVSN
Trigger: ATTGCTGACCGCTTCATGGCATCTATTGAAGTCATC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAGAAGACTCGTAGATaGTTGATCTTGCGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKKKTRR*LILRVS
Trigger: AGAGACTCGCAAGATCAAGCATCTACGAGTCTTCTT...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACTCGGTGTTTGTCTGTaGGGTACTTTTTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGALGVCL*GTFCAC
Trigger: ACATGCACAAAAAGTACCGCACAGACAAACACCGAG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTTCAGGATATTGCCTaGACCAGTCATCATACGAGT +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNLQDIA*TSHHTS
Trigger: ACTCGTATGATGACTGGTGCAGGCAATATCCTGAAG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGTTTCTTCAGGATATTaGCTGCACCAGTCATCATAC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIVSSGY*LHQSSY
Trigger: GTATGATGACTGGTGCAGGCAATATCCTGAAGAAAC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCTTGGCTTGTTCTGCTaGATGTTTCTTCAGGATATT +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERLGLFC*MFLQDI
Trigger: AATATCCTGAAGAAACATGCAGCAGAACAAGCCAAG...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCTTCTTGGCTTGTTCTaGTGCATGTTTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLLLGLF*CMFLQD
Trigger: ATCCTGAAGAAACATGCAGCAGAACAAGCCAAGAAG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATGTCGTCATCAATTATaGCCACGGAGAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARCRHQL*PRRTPS
Trigger: AGAAGGAGTTCTCCGTGGGCATAATTGATGACGACA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGCCTCTATGCGGACATTaGTCAACCTTACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLPLCGH*STLQRS
Trigger: ACTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGG...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATATCCCCTCCTCTGGCTaGTCCTCCTCTATGCGGACA +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHIPSSG*SSSMRT
Trigger: TGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGAT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGAAAAGTGAAGATGCCTaGATGGTCATCATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERKSEDA*MVIIQD
Trigger: ATCTTGGATGATGACCATGCAGGCATCTTCACTTTT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTAGCAAGGACTTGGAGATaGCCAAAGGTATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLARTWR*PKVSAW
Trigger: CCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGC...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp CTGTTTGTGGTCTACTCACATAATGTGGAGGTTAAGAAATTGGACCACTTACTTACCATGATGGGGACATaGAGGGTGAACTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LFVVYSHNVEVKKLDHLLTMMGT*RVNCGL
Trigger: GAGTCCACAGTTCACCCTGCATGTCCCCATCATGGT...AAGTAAGTGGTCCAATTTCTTAACCTCCACATTATGTGAGTAGACCACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGCTGGCAAACGTATCTaGGACAGAGGTGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDAGKRI*DRGAKC
Trigger: GCATTTGGCACCTCTGTCCCAGATACGTTTGCCAGC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTTCTGCATATACATCCTaGAGGGCAGCAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFISAYTS*RAAALL
Trigger: CAGCAAAGCTGCTGCCCTCCAGGATGTATATGCAGA...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCAAAGAGCCATGTTGTaGCGAGCTTGCAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEQRAML*RACSHG
Trigger: CCCGTGGCTGCAAGCTCGCCACAACATGGCTCTTTG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAATAGGCCTCTAGTGTaGCAAAGAGTATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKNRPLV*QRVCRG
Trigger: TCCTCTACATACTCTTTGCCACACTAGAGGCCTATT...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGAATAGGCCTCTAGTGTaGCAAAGAGTATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLNRPLV*QRVCRG
Trigger: TCCTCTACATACTCTTTGCCACACTAGAGGCCTATT...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGGGAGAGATCACTGGTaGGGAAGTGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDGRDHW*GSALLL
Trigger: TAAGAGAAGGGCACTTCCCCACCAGTGATCTCTCCC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGATGGAGCCAAGAGGTaGCAGGAGAGCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDDGAKR*QESMCL
Trigger: TAGACACATGCTCTCCTGCCACCTCTTGGCTCCATC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGTAACCAGCCCAAAATaGAGGAAGGCAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIVTSPK*RKAEVR
Trigger: TCTCACCTCTGCCTTCCTCCATTTTGGGCTGGTTAC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCAGTCATCATACGAGTaGCTTGGATACGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKQSSYE*LGYGRR
Trigger: CCTTCTACCGTATCCAAGCCACTCGTATGATGACTG...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAACTACTGATTGAGCACTaGGTGAGGTGCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: DPFHTFNYIQRASAKATKLLIEH*VRCWIL
Trigger: CAAAATCCAGCACCTCACCCAGTGCTCAATCAGTAG...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp GGGCATCTCATCCACAGGCCTTCCTGGGATCATCCATCTAATTTCCAACCTTCTCTGATATTTACTGAGTaGGCTTATTGTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GHLIHRPSWDHPSNFQPSLIFTE*AYCSPL
Trigger: CAAAGGAGAACAATAAGCCCACTCAGTAAATATCAG...AGAAGGTTGGAAATTAGATGGATGATCCCAGGAAGGCCTGTGGATGAGATGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 72 bp ACCTTCTTAAAGCCTCAAATGTTGTTAGCTGTTGTCTaGGCCAATTGCAAGGACTTGGAGATGCCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: TFLKPQMLLAVV*ANCKDLEMPKG
Trigger: ACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCCAAGACAACAGCTAACAACATTTGAGGCTTTAAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 72 bp GTGGATCACAGGGTAACCTTCTTAAAGCCTCAAATGTaGTTAGCTGTTGTCTTGGCCAATTGCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: VDHRVTFLKPQM*LAVVLANCKDL
Trigger: CAAGTCCTTGCAATTGGCCAAGACAACAGCTAACAACATTTGAGGCTTTAAGAAGGTTACCCTGTGATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGTTCACCAAGGGCAATaGAGAAATTCTCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARVHQGQ*RNSLAF
Trigger: AAAGGCAAGAGAATTTCTTCATTGCCCTTGGTGAAC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000381269.6
CDS-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTAACAACAGCTGTGACTaGATCTTTGAGACCAATGGT +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTNNSCD*IFETNG
Trigger: ACCATTGGTCTCAAAGATTCAGTCACAGCTGTTGTT...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATTATTAACAACAGCTGTGACTaGATCTTTGAGACCAATGGT +
Preference number: 4 (lower is better)
Translates to: NCKDLEMPKGICLAYLIINNSCD*IFETNG
Trigger: ACCATTGGTCTCAAAGATTCAGTCACAGCTGTTGTT...AATAATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCCTCCATTGTTTGATTaGTTAAGACTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKPPLFD*LRLCPF
Trigger: GAAAGGGCAAAGTCTTAATCAATCAAACAATGGAGG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCCTCCATTGTTTGATTaGTTAAGACTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: WAERRNPASKEMRGKGIIPPLFD*LRLCPF
Trigger: GAAAGGGCAAAGTCTTAATCAATCAAACAATGGAGG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAAC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEPCVGE*AYFYPN
Trigger: GTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATCCCTGCGTGGGTGAGTaGGCTTATTTCTACCCCAAC +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHPCVGE*AYFYPN
Trigger: GTTGGGGTAGAAATAAGCTCACTCACCCACGCAGGG...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGTACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGGAACATGGGAGAAATaGGGAATTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAGTWEK*GIPVPI
Trigger: GATAGGAACTGGAATTCCTCATTTCTCCCATGTTCC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGGAAAAATAGCTTCATaGAGTTTAAGAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GHMELGREEKPCFQRNERGKIAS*SLRTSR
Trigger: CCTGCTTGTTCTTAAACTTCATGAAGCTATTTTTCC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGGCTCCAAGGGATTATaGCAACTAAGATTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTGSKGL*QLRFLL
Trigger: TAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGCCAGCAATGAACCCATaGCCACACACCTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVPAMNP*PHTSIK
Trigger: TTTAATTGAGGTGTGTGGTCATGGGTTCATTGCTGG...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATAGACTCGTAGATGCTTaGTCTTGCGAGTCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDRLVDA*SCESLR
Trigger: ACGGAGAGACTCGCAAGATCAAGCATCTACGAGTCT...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTATCACATTCAAAAGTaGAGATGCCTGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHYHIQK*RCLHGH
Trigger: ATGACCATGCAGGCATCTTCACTTTTGAATGTGATA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GTTCAGAGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTTTCTGTTTGTCTCTaGGTGTTCCTAAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: VQSSEAPKPLTELSKEPGLSVCL*VFLRKR
Trigger: TCTTTTTCTTAGGAACACTCAGAGACAAACAGAAAG...CCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACTCTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp CCTGCTAACTCCTACATTCAGGCCCAACTTCCTTCCGTATGCAGTACCTTTTCTGGTTTTCCTAGAATTTaGTGTGAATTCAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: PANSYIQAQLPSVCSTFSGFPRI*CEFSYS
Trigger: AGAGTAGCTGAATTCACATCAAATTCTAGGAAAACC...AGAAAAGGTACTGCATACGGAAGGAAGTTGGGCCTGAATGTAGGAGTTAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGACAGAGGTGCCAAATaGCACGAAAACAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIDRGAK*HENNSC
Trigger: ACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTATCTGGGACAGAGGTaGCAAATGCCACGAAAACAA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAYLGQR*QMPRKQ
Trigger: TTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGCCAATGGAGGCGTCTaGATATACATCCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHANGGV*IYILEG
Trigger: GCCCTCCAGGATGTATATGCAGACGCCTCCATTGGC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGACATCTCTTCTCTCCTaGCTCAGGTACAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKTSLLS*LRYKAK
Trigger: TTTGGCTTTGTACCTGAGGCAGGAGAGAAGAGATGT...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCTTTGCCCATTAAGCTaGCGGAAGAAGCCAAATCAA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVALCPLS*RKKPNQ
Trigger: TTGATTTGGCTTCTTCCGGCAGCTTAATGGGCAAAG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCAGGACTCATTGTTCTaGCCTGTGCTTGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEQDSLF*PVLGTS
Trigger: GGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGAACATGTTGAAGGCTaGACTCCCTACAATGGTAGA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAEHVEG*TPYNGR
Trigger: TCTACCATTGTAGGGAGTGCAGCCTTCAACATGTTC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGAGCAGTCGTTTATCTaGCACCCAGGCCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEEQSFI*HPGQKD
Trigger: GTCCTTCTGGCCTGGGTGGCAGATAAACGACTGCTC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACCTTGGCTTGTTCTGCTaGATGTTTCTTCAGGATATT +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHLGLFC*MFLQDI
Trigger: AATATCCTGAAGAAACATGCAGCAGAACAAGCCAAG...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTTCTTGGCTTGTTCTaGTGCATGTTTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNLLGLF*CMFLQD
Trigger: ATCCTGAAGAAACATGCAGCAGAACAAGCCAAGAAG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATTGTGCACCTCGCTCATaGTGGAGGCCTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHCAPRS*WRPSWL
Trigger: AAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGCACA...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACAAAAGTGAAGATGCCTaGATGGTCATCATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHKSEDA*MVIIQD
Trigger: ATCTTGGATGATGACCATGCAGGCATCTTCACTTTT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CCTGCTAACTCCTACATTCAGGCCCAACTTCCTTCCGTATGCAGTACCTTTTCTCAACTTCCTTCCGTATaGAGTACCTTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PANSYIQAQLPSVCSTFSQLPSV*STFSFS
Trigger: AGAAAAAGAAAAGGTACTGCATACGGAAGGAAGTTG...AGAAAAGGTACTGCATACGGAAGGAAGTTGGGCCTGAATGTAGGAGTTAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGATGGCCTCCATGAACTaGTCCCTCCAGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEMASMN*SLQEWV
Trigger: GACCCATTCCTGGAGGGACCAGTTCATGGAGGCCAT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTCTGCATATACATCCTaGAGGGCAGCAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDSAYTS*RAAALL
Trigger: CAGCAAAGCTGCTGCCCTCCAGGATGTATATGCAGA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGATAATAGGGACATATaGAATTGGGCAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARDNRDI*NWAERR
Trigger: TCTCCTCTCTGCCCAATTCCATATGTCCCTATTATC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCTGGAATTCCTTTGTaGCACCTTTTTCACTCACTT +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNPGIPL*HLFHSL
Trigger: AAGTGAGTGAAAAAGGTGCCACAAAGGAATTCCAGG...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGAGAATTGGAAAGGCTTaGGCAAAGAGGGACAATTGC +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLRIGKA*AKRDNC
Trigger: GCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCT...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCAGAATTGGAAAGGCTTaGGCAAAGAGGGACAATTGC +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVARIGKA*AKRDNC
Trigger: GCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCT...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCCCATCTCTTCTATTTaGCGGGTCTTCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDPISSI*RVFLQK
Trigger: CTTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATAAAGAGCATAGTAATTaGCCATCTCCACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGREEKPCFQRNERQRNNKEHSN*PSPPAD
Trigger: ATCAGCTGGTGGAGATGGCCAATTACTATGCTCTTT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTGCTGGAGGCCTTCTTaGCTTGTTCTGCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDCWRPS*LVLLHV
Trigger: AACATGCAGCAGAACAAGCCAAGAAGGCCTCCAGCA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTGTAGTCCACATACATaGTCTTTGACATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLCSPHT*SLTCLP
Trigger: GGGGAGACATGTCAAAGACCATGTATGTGGACTACA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATAGTCAGCCCCTGCATTaGCAGAACCATCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDSQPLH*QNHPLF
Trigger: AAACAGAGGATGGTTCTGCCAATGCAGGGGCTGACT...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAACCAATTGCAAGGACTTaGAGATGCCCAAAGGTATCT +
Preference number: 4 (lower is better)
Translates to: DPFHTFNYIQRASAKATKPIART*RCPKVS
Trigger: AGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGG...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 72 bp ATTTACCCAAGGTCACATAGGATGTTAGCAAGAGACTaGACCCTAAAGTCCTCATGTAAGGACCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: IYPRSHRMLARD*TLKSSCKDPFH
Trigger: ATGGAAAGGGTCCTTACATGAGGACTTTAGGGTCAAGTCTCTTGCTAACATCCTATGTGACCTTGGGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 72 bp TTGTTCTCCTTTGACTACTTTTTCAGTAAGGGAAGTTaGCCATCCCATAATATCTCCCCAGGGAACCTTGAC +
Preference number: 4 (lower is better)
Translates to: LFSFDYFFSKGS*PSHNISPGNLD
Trigger: GTCAAGGTTCCCTGGGGAGATATTATGGGATGGCAAACTTCCCTTACTGAAAAAGTAGTCAAAGGAGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGTTCACCAAGGGCAATaGAGAAATTCTCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVVHQGQ*RNSLAF
Trigger: AAAGGCAAGAGAATTTCTTCATTGCCCTTGGTGAAC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000381269.6
CDS-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTGGCTTAGAACCCCTTaGTGTAGCAATAGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDWLRTP*CSNRPL
Trigger: TAGAGGCCTATTGCTACATCAAGGGGTTCTAAGCCA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACCTCCATTGTTTGATTaGTTAAGACTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARPPLFD*LRLCPF
Trigger: GAAAGGGCAAAGTCTTAATCAATCAAACAATGGAGG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGAGTACCCTGCGTGGGTaGGTGAGCTTATTTCTACCC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIESTLRG*VSLFLP
Trigger: GGGTAGAAATAAGCTCACTCACCCACGCAGGGTACT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGGCTCCAAGGGATTATaGCAACTAAGATTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLGSKGL*QLRFLL
Trigger: TAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTGTCAACATAGCTTATaGCATGAGCACTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKCQHSL*HEHCFF
Trigger: AAAGAAACAGTGCTCATGTCATAAGCTATGTTGACA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCCACAAAATAGACAATaGCCCTGGCAATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDPQNRQ*PWQSCP
Trigger: GGGACAAGATTGCCAGGGTCATTGTCTATTTTGTGG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TCCGCTCCTTTCTGTTTGTCTCTGAGTGTTCCTAAGAAAAAGAAAGAGTATGTAGACAGAGGTGCCAAATaGCACGAAAACAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: SAPFCLSLSVPKKKKEYVDRGAK*HENNSC
Trigger: ACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTC...TACATACTCTTTCTTTTTCTTAGGAACACTCAGAGACAAACAGAAAGGAGCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTACATCTCTTCTCTCCTaGCTCAGGTACAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFITSLLS*LRYKAK
Trigger: TTTGGCTTTGTACCTGAGGCAGGAGAGAAGAGATGT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGCAGAGGTGAGAGGCTaGAACCTTAACCACGCCATA +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHAEVRG*NLNHAI
Trigger: TATGGCGTGGTTAAGGTTGCAGCCTCTCACCTCTGC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGAAGAAGACTCGTAGATaGTTGATCTTGCGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLKKTRR*LILRVS
Trigger: AGAGACTCGCAAGATCAAGCATCTACGAGTCTTCTT...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCTCATAGTCAGCCCCTaGATTGGCAGAACCATCCTC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIELIVSP*IGRTIL
Trigger: GAGGATGGTTCTGCCAATGCAGGGGCTGACTATGAG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGCTGGCAAACGTATCTaGGACAGAGGTGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEAGKRI*DRGAKC
Trigger: GCATTTGGCACCTCTGTCCCAGATACGTTTGCCAGC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCAATAGGCCTCTAGTGTaGCAAAGAGTATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVANRPLV*QRVCRG
Trigger: TCCTCTACATACTCTTTGCCACACTAGAGGCCTATT...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCTGTTGGCTCGGACCTaGAATTCCTTTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIELLART*NSFVAP
Trigger: AGGTGCCACAAAGGAATTCCAGGTCCGAGCCAACAG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCATGTTTCTCTCTGTTaGCTCGGACCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDHVSLC*LGPGIP
Trigger: AGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGATTTTAACTGTCATATaGGGCATTTATTCACGAACC +
Preference number: 4 (lower is better)
Translates to: SSEAPKPLTELSKEPGLVILTVI*GIYSRT
Trigger: GGTTCGTGAATAAATGCCCCATATGACAGTTAAAAT...CACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 72 bp TGGTTTATATATGTATCACAGGGCCTTGCAGGGTGTTaGACTTTAGATCTTGGCACAGATTGTAGATACAGG +
Preference number: 4 (lower is better)
Translates to: WFIYVSQGLAGC*TLDLGTDCRYR
Trigger: CCTGTATCTACAATCTGTGCCAAGATCTAAAGTCAAACACCCTGCAAGGCCCTGTGATACATATATAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTAACAACAGCTGTGACTaGATCTTTGAGACCAATGGT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFINNSCD*IFETNG
Trigger: ACCATTGGTCTCAAAGATTCAGTCACAGCTGTTGTT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCCTCCATTGTTTGATTaGTTAAGACTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAPPLFD*LRLCPF
Trigger: GAAAGGGCAAAGTCTTAATCAATCAAACAATGGAGG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 4 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVADSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAGGAAAAATAGCTTCATaGAGTTTAAGAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAGKIAS*SLRTSR
Trigger: CCTGCTTGTTCTTAAACTTCATGAAGCTATTTTTCC...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCCTTCCCACATTCGTTaGGAAAAGGTCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEPSHIR*EKVCRA
Trigger: TGCCCTACAGACCTTTTCTCAACGAATGTGGGAAGG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTGTCAACATAGCTTATaGCATGAGCACTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTCQHSL*HEHCFF
Trigger: AAAGAAACAGTGCTCATGTCATAAGCTATGTTGACA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTATCACATTCAAAAGTaGAGATGCCTGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAYHIQK*RCLHGH
Trigger: ATGACCATGCAGGCATCTTCACTTTTGAATGTGATA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTAAGGGCTTTCCAGTTCTaGTATTTACTGAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLRAFQF*YLLSGL
Trigger: AAGCCCACTCAGTAAATATCAGAACTGGAAAGCCCT...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGCCCTTTCAGTTAATTaGCAGGGCCTAAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEALSVN*QGLSWV
Trigger: CACCCAACTTAGGCCCTGGCAATTAACTGAAAGGGC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGTTTGGCGGGTCTTCCTaGAGAAGGATACACAAGTGG +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEFGGSS*RRIHKW
Trigger: CCACTTGTGTATCCTTCTGCAGGAAGACCCGCCAAA...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGATGACTTCAATAGATaGCATGAAGCGGTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIDDFNR*HEAVSN
Trigger: ATTGCTGACCGCTTCATGGCATCTATTGAAGTCATC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCTTCAGGATATTGCCTaGACCAGTCATCATACGAGT +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDLQDIA*TSHHTS
Trigger: ACTCGTATGATGACTGGTGCAGGCAATATCCTGAAG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGTTTCTTCAGGATATTaGCTGCACCAGTCATCATAC +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIVSSGY*LHQSSY
Trigger: GTATGATGACTGGTGCAGGCAATATCCTGAAGAAAC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCTTGGCTTGTTCTGCTaGATGTTTCTTCAGGATATT +
Preference number: 4 (lower is better)
Translates to: TKPKIIKKACIPFVLPVALGLFC*MFLQDI
Trigger: AATATCCTGAAGAAACATGCAGCAGAACAAGCCAAG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTCTTCTTGGCTTGTTCTaGTGCATGTTTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFILLGLF*CMFLQD
Trigger: ATCCTGAAGAAACATGCAGCAGAACAAGCCAAGAAG...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCAAGACACACAGAATTaGAAAGGCTTGGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDQDTQN*KGLGKE
Trigger: CTCTTTGCCCAAGCCTTTCCAATTCTGTGTGTCTTG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGAGTCAGCCCCTGCATTaGCAGAACCATCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIESQPLH*QNHPLF
Trigger: AAACAGAGGATGGTTCTGCCAATGCAGGGGCTGACT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGACTGTTGAATATTGCTaGAGGCATCCCCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIETVEYC*RHPLLW
Trigger: CCAGAGGAGGGGATGCCTCCAGCAATATTCAACAGT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATTATTAAGGATATGTTTGCTTaGTACAGGAAAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: NCKDLEMPKGICLAYLIIKDMFA*YRKDFP
Trigger: AGGGAAATCTTTCCTGTACCAAGCAAACATATCCTT...AATAATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp TCCGCTCCTTTCTGTTTGTCTCTGAGTGTTCCTAAGAAAAAGAAAGAGTATGTAATCCACAGGCCTTCCTaGGATCATCCATCTAATTTC +
Preference number: 4 (lower is better)
Translates to: SAPFCLSLSVPKKKKEYVIHRPS*DHPSNF
Trigger: GAAATTAGATGGATGATCCCAGGAAGGCCTGTGGAT...TACATACTCTTTCTTTTTCTTAGGAACACTCAGAGACAAACAGAAAGGAGCGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR TCA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTCCTCCATTGTTTGATTaGTTAAGACTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIPPLFD*LRLCPF
Trigger: GAAAGGGCAAAGTCTTAATCAATCAAACAATGGAGG...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGGAAAAATAGCTTCATaGAGTTTAAGAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVGKIAS*SLRTSR
Trigger: CCTGCTTGTTCTTAAACTTCATGAAGCTATTTTTCC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGGAAAAATAGCTTCATaGAGTTTAAGAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLGKIAS*SLRTSR
Trigger: CCTGCTTGTTCTTAAACTTCATGAAGCTATTTTTCC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTGTCAACATAGCTTATaGCATGAGCACTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLCQHSL*HEHCFF
Trigger: AAAGAAACAGTGCTCATGTCATAAGCTATGTTGACA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGACAGAGGTGCCAAATaGCACGAAAACAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEDRGAK*HENNSC
Trigger: ACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGATGACTTCAATAGATaGCATGAAGCGGTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDDDFNR*HEAVSN
Trigger: ATTGCTGACCGCTTCATGGCATCTATTGAAGTCATC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATAGGGACATATGGAATTaGGCAGAGAGGAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHRDIWN*AERRNP
Trigger: AGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATAAAGAGCATAGTAATTaGCCATCTCCACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDKEHSN*PSPPAD
Trigger: ATCAGCTGGTGGAGATGGCCAATTACTATGCTCTTT...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATCAGAGATCTGAGATGGTGTaGAAGATAATGAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: LSIPSTISKELQPKPLNQRSEMV*KIMRWS
Trigger: ACTCCATCTCATTATCTTCCACACCATCTCAGATCT...CTGATTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATATTTAATAGGGCTTTaGGAAACATTACAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: DPFHTFNYIQRASAKATKYLIGL*ETLQGE
Trigger: TTCCCCCTGTAATGTTTCCCAAAGCCCTATTAAATA...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTATGGAGGTTAAGAAATTaGACCACTTACTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLWRLRN*TTYLGM
Trigger: CATGCCCAAGTAAGTGGTCCAATTTCTTAACCTCCA...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CCA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTAGCTGGCAAACGTATCTaGAAAAGGACAAAGACACAT +
Preference number: 4 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLAGKRI*KRTKTH
Trigger: ATGTGTCTTTGTCCTTTTCCAGATACGTTTGCCAGC...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
3UTR CAA 72 bp TTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FLHHFKKYSQPS*YRALGSKSVVK
Trigger: CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGATTCCTCCATTGTTTaGTTGATTAAGACTTTGCCC +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDDSSIV*LIKTLP
Trigger: GGGCAAAGTCTTAATCAATCAAACAATGGAGGAATC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATTACACAAGTGGACACTaGCACAACAAGACACACAGA +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHYTSGH*HNKTHR
Trigger: TCTGTGTGTCTTGTTGTGTCAGTGTCCACTTGTGTA...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATCTTTGCCCATTAAGCTaGCGGAAGAAGCCAAATCAA +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHLCPLS*RKKPNQ
Trigger: TTGATTTGGCTTCTTCCGGCAGCTTAATGGGCAAAG...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATCTTCAGGATATTGCCTaGACCAGTCATCATACGAGT +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHLQDIA*TSHHTS
Trigger: ACTCGTATGATGACTGGTGCAGGCAATATCCTGAAG...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
3UTR CAA 72 bp ACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATaGCTTTTTGTATCTGACTTGATTCAACATAAGCAT +
Preference number: 4 (lower is better)
Translates to: TQNWKGLGKEGQ*LFVSDLIQHKH
Trigger: ATGCTTATGTTGAATCAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATTATGGTTTTCCTCTTTaGGCTTCCGTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHYGFPL*ASVSSA
Trigger: TGCTGAAGAAACGGAAGCTCAAAGAGGAAAACCATA...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216568.11
CDS-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGAACAACAGCTGTGACTaGATCTTTGAGACCAATGGT +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIENNSCD*IFETNG
Trigger: ACCATTGGTCTCAAAGATTCAGTCACAGCTGTTGTT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGGAAAAATAGCTTCATaGAGTTTAAGAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDGKIAS*SLRTSR
Trigger: CCTGCTTGTTCTTAAACTTCATGAAGCTATTTTTCC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR TCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGGCTCCAAGGGATTATaGCAACTAAGATTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHGSKGL*QLRFLL
Trigger: TAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGATGACTTCAATAGATaGCATGAAGCGGTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHDDFNR*HEAVSN
Trigger: ATTGCTGACCGCTTCATGGCATCTATTGAAGTCATC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR GCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGTTTCTTCAGGATATTaGCTGCACCAGTCATCATAC +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEVSSGY*LHQSSY
Trigger: GTATGATGACTGGTGCAGGCAATATCCTGAAGAAAC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATAATAGGCCTCTAGTGTaGCAAAGAGTATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHNRPLV*QRVCRG
Trigger: TCCTCTACATACTCTTTGCCACACTAGAGGCCTATT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATAAAGAGCATAGTAATTaGCCATCTCCACCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHKEHSN*PSPPAD
Trigger: ATCAGCTGGTGGAGATGGCCAATTACTATGCTCTTT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CCA 90 bp TCCGCTCCTTTCTGTTTGTCTCTGAGTGTTCCTAAGAAAAAGAAAGAGTATGTAATTATAAACTCCACGTaGAGAAGGAAGCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: SAPFCLSLSVPKKKKEYVIINST*RRKHVY
Trigger: ATACACATGCTTCCTTCTCCACGTGGAGTTTATAAT...TACATACTCTTTCTTTTTCTTAGGAACACTCAGAGACAAACAGAAAGGAGCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR GCA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATTGGAGGTGGATTTGTTaGTGTTGCTTGTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHWRWIC*CCLFVF
Trigger: GAATACAAACAAGCAACAGCAACAAATCCACCTCCA...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR TCA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGTGTCAACATAGCTTATaGCATGAGCACTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIECQHSL*HEHCFF
Trigger: AAAGAAACAGTGCTCATGTCATAAGCTATGTTGACA...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 90 bp CAGCCCGGCGCGCCCTGGCGGCTCCGAGGGACCTGGGCTCGGGCTTaGGGTCGCGTCGCCTGGGCTTTCCCTGGGCTGGGAGCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: QPGAPWRLRGTWARA*GRVAWAFPGLGARR
Trigger: CCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTCCCTCGGAGCCGCCAGGGCGCGCCGGGCTG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 90 bp TCGCCTGGGCTTTCCCTGGGCTGGGAGCGCGCCGGGTCTCCGCCTTaGACGCTGTCACCGCGGGAGACGTCTCGGCCTCGCCGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: SPGLSLGWERAGSPP*TLSPRETSRPRRAQ
Trigger: CTGCGCGCGGCGAGGCCGAGACGTCTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 90 bp CCTGGGCTCGGGCTTGCGGTCGCGTCGCCTGGGCTTTCCCTGGGCTaGGAGCGCGCCGGGTCTCCGCCTTGCACGCTGTCACCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PGLGLAVASPGLSLG*ERAGSPPCTLSPRE
Trigger: CTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 90 bp TGGCGGCTCCGAGGGACCTGGGCTCGGGCTTGCGGTCGCGTCGCCTaGGCTTTCCCTGGGCTGGGAGCGCGCCGGGTCTCCGCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: WRLRGTWARACGRVA*AFPGLGARRVSALH
Trigger: GTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTCCCTCGGAGCCGCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 90 bp AGGGACCTGGGCTCGGGCTTGCGGTCGCGTCGCCTGGGCTTTCCCTaGGCTGGGAGCGCGCCGGGTCTCCGCCTTGCACGCTGTCACCGC +
Preference number: 5 (lower is better)
Translates to: RDLGSGLRSRRLGFP*AGSAPGLRLARCHR
Trigger: GCGGTGACAGCGTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 90 bp GATTCCTGCAGGAAGGGGCAGGAAGGCAAGCAGCCCGGCGCGCCCTaGCGGCTCCGAGGGACCTGGGCTCGGGCTTGCGGTCGCGTCGCC +
Preference number: 5 (lower is better)
Translates to: DSCRKGQEGKQPGAP*RLRGTWARACGRVA
Trigger: GGCGACGCGACCGCAAGCCCGAGCCCAGGTCCCTCGGAGCCGCCAGGGCGCGCCGGGCTGCTTGCCTTCCTGCCCCTTCCTGCAGGAATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 90 bp TCGGCCTCGCCGCGCGCAGAGGGGACGCGCGGAGAGGCTGGTTTCTaGGCGAGCGGAGAGCTTTGCCCATTAAGCTGCCGGAAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SASPRAEGTRGEAGF*ASGELCPLSCRKKP
Trigger: TGGCTTCTTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGCCCAGAAACCAGCCTCTCCGCGCGTCCCCTCTGCGCGCGGCGAGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS TCA 90 bp CTTCCGCACGGATTTCAGAAAGAGGGAAACCCCGACCCAGAGCGGTaGCTGGAATCTACGCCCGGGAGAGGCCCGGAGTCCCGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LPHGFQKEGNPDPER*LESTPGRGPESRPR
Trigger: CCGCGGCCGGGACTCCGGGCCTCTCCCGGGCGTAGATTCCAGTCACCGCTCTGGGTCGGGGTTTCCCTCTTTCTGAAATCCGTGCGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGACCTGGGCTCGGGCTaGCGGTCGCGTCGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCDLGSG*RSRRLG
Trigger: GCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCGCCGGGTCTCCGCCTaGCACGCTGTCACCGCGGGA +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGERRVSA*HAVTAG
Trigger: TCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGCG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 90 bp ACACCCTCCTTGCAGTCCGATGACCCTGAACAGGACTCATTGTTCTaGCCTGTGCTTGGCACGTCCCCTGAGCCACCAGCCTCTGCTCGA +
Preference number: 5 (lower is better)
Translates to: TPSLQSDDPEQDSLF*PVLGTSPEPPASAR
Trigger: TCGAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTGTTCAGGGTCATCGGACTGCAAGGAGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS-3UTR CAA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGGACCTGGGCTCGGGCTaGCGGTCGCGTCGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: MELGREEKPCFQRNERQRDLGSG*RSRRLG
Trigger: GCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTC...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 90 bp CCTTGCAGTCCGATGACCCTGAACAGGACTCATTGTTCTGCCCTGTaGTTGGCACGTCCCCTGAGCCACCAGCCTCTGCTCGAAGACCAT +
Preference number: 5 (lower is better)
Translates to: PCSPMTLNRTHCSAL*LARPLSHQPLLEDH
Trigger: ATGGTCTTCGAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTGTTCAGGGTCATCGGACTGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCATGTTGTGGCGAGCTaGCAGCCACGGGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEHVVAS*QPRGPP
Trigger: TGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACATG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCLPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGACCTGGGCTCGGGCTaGCGGTCGCGTCGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: WAERRNPASKEMRGKGIIDLGSG*RSRRLG
Trigger: GCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 90 bp GAGGGGACGCGCGGAGAGGCTGGTTTCTGGGCGAGCGGAGAGCTTTaGCCATTAAGCTGCCGGAAGAAGCCAAATCAAAAAGCCAATCTC +
Preference number: 5 (lower is better)
Translates to: EGTRGEAGFWASGEL*PLSCRKKPNQKANL
Trigger: GAGATTGGCTTTTTGATTTGGCTTCTTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGCCCAGAAACCAGCCTCTCCGCGCGTCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCTGCTGGAGGCTCTGTaGTGTGGCTTAGAACCCCTT +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCLLEAL*CGLEPL
Trigger: AAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALLPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCATGACCCTGGCAATCTaGTCCCCAAGGGAAGGGTTC +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCMTLAI*SPREGF
Trigger: GAACCCTTCCCTTGGGGACAAGATTGCCAGGGTCAT...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCGTAGATGCTTGATCTaGCGAGTCTCTCCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCRRCLI*RVSPSG
Trigger: CCCAGACGGAGAGACTCGCAAGATCAAGCATCTACG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 90 bp GCCCCTAGAGCATCAGGTGTGTCCAAACCAGCGCAGGCACAGAAGTaGTCAGCTCTGCAGGAGAGTCCCCAGCAGACAATGAGAAATGAC +
Preference number: 5 (lower is better)
Translates to: APRASGVSKPAQAQK*SALQESPQQTMRND
Trigger: GTCATTTCTCATTGTCTGCTGGGGACTCTCCTGCAGAGCTGACCACTTCTGTGCCTGCGCTGGTTTGGACACACCTGATGCTCTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS-3UTR CAA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACGCCGGGTCTCCGCCTaGCACGCTGTCACCGCGGGA +
Preference number: 5 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARRRVSA*HAVTAG
Trigger: TCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGCG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTTGTTCTGCCCTGTGCTaGGCACGTCCCCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGICSALC*ARPLSH
Trigger: GTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACA...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS TCA 90 bp TCTTGTCCCCAAGGGAAGGGTTCTCCGGGTACCAGATTGGCAGGATaGCACCCTCCTTGCAGTCCGATGACCCTGAACAGGACTCATTGT +
Preference number: 5 (lower is better)
Translates to: SCPQGKGSPGTRLAG*HPPCSPMTLNRTHC
Trigger: ACAATGAGTCCTGTTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCTGCCAATCTGGTACCCGGAGAACCCTTCCCTTGGGGACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CCA 90 bp GCTCCCAGCAGCATATCTCTCCTCCTCGAAGGGCAGAGGGGCCTATaGGCCACTCCACAAGTGAATAACCTGATATTCCACGTTCCATCC +
Preference number: 5 (lower is better)
Translates to: APSSISLLLEGQRGL*ATPQVNNLIFHVPS
Trigger: GGATGGAACGTGGAATATCAGGTTATTCACTTGTGGAGTGGCCCATAGGCCCCTCTGCCCTTCGAGGAGGAGAGATATGCTGCTGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGGCGAGCGGAGAGCTTaGCCCATTAAGCTGCCGGAA +
Preference number: 5 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIGERRA*PIKLPE
Trigger: TTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGCC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCGCCGGGTCTCCGCCTaGCACGCTGTCACCGCGGGA +
Preference number: 5 (lower is better)
Translates to: TKPKIIKKACIPFVLPVARRVSA*HAVTAG
Trigger: TCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGCG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGACCTGGGCTCGGGCTaGCGGTCGCGTCGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIDLGSG*RSRRLG
Trigger: GCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGTGTTCTGCCCTGTGCTaGGCACGTCCCCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVCSALC*ARPLSH
Trigger: GTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACA...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCCCACATACATGGTCTTaGACATGTCTCCCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCPHTWS*TCLPLS
Trigger: GGAAAGGGGGAGACATGTCAAAGACCATGTATGTGG...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGGCAAGGGAAGACTGTaGAATATTGCTGGAGGCATC +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCGKGRL*NIAGGI
Trigger: GATGCCTCCAGCAATATTCAACAGTCTTCCCTTGCC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGCATGTTGTGGCGAGCTaGCAGCCACGGGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKHVVAS*QPRGPP
Trigger: TGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACATG...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGTCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCT +
Preference number: 5 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALSSSSP*SSHTIP
Trigger: AGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGA...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACTGGCGAGCGGAGAGCTTaGCCCATTAAGCTGCCGGAA +
Preference number: 5 (lower is better)
Translates to: ANVSGTEVPNATKTTAVTGERRA*PIKLPE
Trigger: TTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGCC...AGTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CAA 90 bp GATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCGGGTCAAAGAAGACCTaGGAAATAAAGTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: DHWWGSALLLGEVLGLPCGSKKT*EIKSSG
Trigger: GCCTGAGGACTTTATTTCCAAGGTCTTCTTTGACCC...GCAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS TCA 90 bp CCCTTCTACTGTCCTAAAGGGGACGATGACTGTACCCCGGGCACCTaGTGTCCGCAGAACCTTGACCTCCATAACACCAATACTCTCACT +
Preference number: 5 (lower is better)
Translates to: PFYCPKGDDDCTPGT*CPQNLDLHNTNTLT
Trigger: AGTGAGAGTATTGGTGTTATGGAGGTCAAGGTTCTGCGGACATCAGGTGCCCGGGGTACAGTCATCGTCCCCTTTAGGACAGTAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS GCA 90 bp GGGTCAAAGAAGACCTTGGAAATAAAGTCCTCAGGCTCATCGGTGTaGACCTCGCTCATGCTGGAGGCCTTCTTGGCTTGTTCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: GSKKTLEIKSSGSSV*TSLMLEAFLACSAA
Trigger: TGCAGCAGAACAAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGCACACCGATGAGCCTGAGGACTTTATTTCCAAGGTCTTCTTTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACATGTTGTGGCGAGCTaGCAGCCACGGGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAHVVAS*QPRGPP
Trigger: TGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACATG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGCAGAATTGGAAAGGCTaGGGCAAAGAGGGACAATTG +
Preference number: 5 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALQNWKG*GKEGQL
Trigger: CAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTG...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGGCGAGCGGAGAGCTTaGCCCATTAAGCTGCCGGAA +
Preference number: 5 (lower is better)
Translates to: GHMELGREEKPCFQRNERGERRA*PIKLPE
Trigger: TTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGCC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTAGCCACTGGCTTCTATaGCAGCACCAGTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGISHWLL*QHQLSS
Trigger: GGAGGACAACTGGTGCTGCAATAGAAGCCAGTGGCT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGATCACTGGTGGGGAAGTGCCCTTCTCTTAGGAGAAGTCCTAGGCCTGCCCTGGATGTCCGCAGAACCTaGACCTCCATAACACCAATA +
Preference number: 5 (lower is better)
Translates to: RSLVGKCPSLRRSPRPALDVRRT*TSITPI
Trigger: TATTGGTGTTATGGAGGTCAAGGTTCTGCGGACATC...CAGGGCAGGCCTAGGACTTCTCCTAAGAGAAGGGCACTTCCCCACCAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGCAGCCCGCCTGCGCTGGGGTTTaGGAAAGAGGTTTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: EAPKPLTELSKEPGLVQPACAGV*ERGFPR
Trigger: TCTAGGAAAACCTCTTTCCAAAACCCCAGCGCAGGC...GGGCTGCACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp GGGCATCTCATCCACAGGCCTTCCTGGGATCATCCATCTAATTTCCAACCTTCTGGGACAGAGGACATGTaGGGGAACCATGATGGGGAC +
Preference number: 5 (lower is better)
Translates to: GHLIHRPSWDHPSNFQPSGTEDM*GNHDGD
Trigger: GTCCCCATCATGGTTCCCCAACATGTCCTCTGTCCC...AGAAGGTTGGAAATTAGATGGATGATCCCAGGAAGGCCTGTGGATGAGATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS CCA 90 bp GCTCGAAGACCATTCAGGAAGAGCACAAAGGTAACCAGCCCAAAATaGAGGAAGGCAGAGGTGAGAGGCTGCAACCTTAACCACGCCATA +
Preference number: 5 (lower is better)
Translates to: ARRPFRKSTKVTSPK*RKAEVRGCNLNHAI
Trigger: TATGGCGTGGTTAAGGTTGCAGCCTCTCACCTCTGCCTTCCTCCATTTTGGGCTGGTTACCTTTGTGCTCTTCCTGAATGGTCTTCGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS-3UTR CAA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 5 (lower is better)
Translates to: GHMELGREEKPCFQRNERKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGCATGTTGTGGCGAGCTaGCAGCCACGGGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVHVVAS*QPRGPP
Trigger: TGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACATG...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCTGCTGGAGGCTCTGTaGTGTGGCTTAGAACCCCTT +
Preference number: 5 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVLLEAL*CGLEPL
Trigger: AAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCATGTTCTGCCCTGTGCTaGGCACGTCCCCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGACSALC*ARPLSH
Trigger: GTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACA...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATTGTTCTGCCCTGTGCTaGGCACGTCCCCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LGREEKPCFQRNERQRNNCSALC*ARPLSH
Trigger: GTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACA...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGAGGATGACACCCTCCTaGCAGTCCGATGACCCTGAA +
Preference number: 5 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVRMTPS*QSDDPE
Trigger: TTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCT...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGAAGACTCGTAGATGCTaGATCTTGCGAGTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEKTRRC*ILRVSP
Trigger: CGGAGAGACTCGCAAGATCAAGCATCTACGAGTCTT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTCTCCTCCCCGGATTCATCCTCATCCTCATCCCCTGCTGCACTGACGGTGATTTTTGCTTCAGATCCTaGAGAATCCGGATCATCTCT +
Preference number: 5 (lower is better)
Translates to: PLLPGFILILIPCCTDGDFCFRS*RIRIIS
Trigger: AGAGATGATCCGGATTCTCAAGGATCTGAAGCAAAA...ATCACCGTCAGTGCAGCAGGGGATGAGGATGAGGATGAATCCGGGGAGGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTCCTCACCGCCACCCTaGGCTGTCCCTTCTACTGTC +
Preference number: 5 (lower is better)
Translates to: WAERRNPASKEMRGKGIISSPPP*AVPSTV
Trigger: GACAGTAGAAGGGACAGCCAAGGGTGGCGGTGAGGA...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAATGTTGTCTTGGCCAATaGCAAGGACTTGGAGATGCC +
Preference number: 5 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQCCLGQ*QGLGDA
Trigger: GGCATCTCCAAGTCCTTGCAATTGGCCAAGACAACA...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp GTTCAGAGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGTGCCCAAAAAGCAGCTaGAGCTGGTGGGCTGAACCC +
Preference number: 5 (lower is better)
Translates to: VQSSEAPKPLTELSKEPGCPKSS*SWWAEP
Trigger: GGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCA...CCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACTCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS TCA 90 bp CAGTTACCTGGAGATGATAACATTCACATTGGGTTGTCGTGCGGGTaGCATGAGAAAGCACAGGCAGCAGGCTCAGCAAGTGATGGTTCC +
Preference number: 5 (lower is better)
Translates to: QLPGDDNIHIGLSCG*HEKAQAAGSASDGS
Trigger: GGAACCATCACTTGCTGAGCCTGCTGCCTGTGCTTTCTCATGTCACCCGCACGACAACCCAATGTGAATGTTATCATCTCCAGGTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216568.11
ENST00000394330.6
ENST00000533541.1
CDS CCA 90 bp TCCTCAAAAATGTCGTCATCAATTATGCCCACGGAGAACTCCTTCTaGGTCTCTCCTGGCTTCAGAACCACCGTGCCCTCTGTGAACTCA +
Preference number: 5 (lower is better)
Translates to: SSKMSSSIMPTENSF*VSPGFRTTVPSVNS
Trigger: TGAGTTCACAGAGGGCACGGTGGTTCTGAAGCCAGGAGAGACCCAGAAGGAGTTCTCCGTGGGCATAATTGATGACGACATTTTTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CCA 90 bp AGGCAAGGGAAGACTGTTGAATATTGCTGGAGGCATCCCCTCCTCTaGCTGCTCCTCCTCTATGCGGACATTGCTCAACCTTACAAAGAA +
Preference number: 5 (lower is better)
Translates to: RQGKTVEYCWRHPLL*LLLLYADIAQPYKE
Trigger: TTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGATGCCTCCAGCAATATTCAACAGTCTTCCCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS-3UTR CAA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 5 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGTCACAAAGAGCCATGTaGTGGCGAGCTTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GHMELGREEKPCFQRNERSQRAM*WRACSH
Trigger: GTGGCTGCAAGCTCGCCACAACATGGCTCTTTGTGA...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGCAGAATTGGAAAGGCTaGGGCAAAGAGGGACAATTG +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEQNWKG*GKEGQL
Trigger: CAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTG...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTTCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCT +
Preference number: 5 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGISSSSP*SSHTIP
Trigger: AGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGA...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GGCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACCCACATACATGGTCTTaGACATGTCTCCCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GKRIWDRGAKCHENNSCDPHTWS*TCLPLS
Trigger: GGAAAGGGGGAGACATGTCAAAGACCATGTATGTGG...GTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTCCTCACCGCCACCCTaGGCTGTCCCTTCTACTGTC +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTSSPPP*AVPSTV
Trigger: GACAGTAGAAGGGACAGCCAAGGGTGGCGGTGAGGA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS TCA 90 bp CCAGCTGATCTAAGTCCTTCTCTGGGTGTTTTTGCTTCAGATCCTTaGGAATCCGGATCATCTCTCTGCGGGACTCATCCACTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PADLSPSLGVFASDP*ESGSSLCGTHPLPS
Trigger: GGAAGGAAGTGGATGAGTCCCGCAGAGAGATGATCCGGATTCTCAAGGATCTGAAGCAAAAACACCCAGAGAAGGACTTAGATCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS TCA 90 bp GAAGTGGTCAGCTCTGCAGGAGAGTCCCCAGCAGACAATGAGAAATaGCCAATCACACTGAGAAGGCCTGTAGAGAATCCTTTGGGAATG +
Preference number: 5 (lower is better)
Translates to: EVVSSAGESPADNEK*PITLRRPVENPLGM
Trigger: CATTCCCAAAGGATTCTCTACAGGCCTTCTCAGTGTGATTGGTCATTTCTCATTGTCTGCTGGGGACTCTCCTGCAGAGCTGACCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS TCA 90 bp AGGCACAGAAGTGGTCAGCTCTGCAGGAGAGTCCCCAGCAGACAATaGGAAATGACCAATCACACTGAGAAGGCCTGTAGAGAATCCTTT +
Preference number: 5 (lower is better)
Translates to: RHRSGQLCRRVPSRQ*EMTNHTEKACRESF
Trigger: AAAGGATTCTCTACAGGCCTTCTCAGTGTGATTGGTCATTTCTCATTGTCTGCTGGGGACTCTCCTGCAGAGCTGACCACTTCTGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS GCA 90 bp TGGAGGCCTTCTTGGCTTGTTCTGCTGCATGTTTCTTCAGGATATTaGCTGCACCAGTCATCATACGAGTGGCTTGGATACGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: WRPSWLVLLHVSSGY*LHQSSYEWLGYGRR
Trigger: CCTTCTACCGTATCCAAGCCACTCGTATGATGACTGGTGCAGGCAATATCCTGAAGAAACATGCAGCAGAACAAGCCAAGAAGGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS GCA 90 bp AAGGGAAGACTGTTGAATATTGCTGGAGGCATCCCCTCCTCTGGCTaGTCCTCCTCTATGCGGACATTGCTCAACCTTACAAAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: KGRLLNIAGGIPSSG*SSSMRTLLNLTKKC
Trigger: ACACTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGATGCCTCCAGCAATATTCAACAGTCTTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGGTCTTCTTGATCAGTTaGTCCACCGTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEVFLIS*STVVLN
Trigger: GTTCAAGACTACGGTGGACAAACTGATCAAGAAGAC...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGCAGCCCGTCTTCTTGATCAGTTaGTCCACCGTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: EAPKPLTELSKEPGLVQPVFLIS*STVVLN
Trigger: GTTCAAGACTACGGTGGACAAACTGATCAAGAAGAC...GGGCTGCACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 5 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LGREEKPCFQRNERQRNNKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 5 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATTATTAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 5 (lower is better)
Translates to: NCKDLEMPKGICLAYLIIKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...AATAATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: WAERRNPASKEMRGKGIIMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGTCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVSHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACAGGATGACACCCTCCTaGCAGTCCGATGACCCTGAA +
Preference number: 5 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHRMTPS*QSDDPE
Trigger: TTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGATGACCCTGGCAATCTaGTCCCCAAGGGAAGGGTTC +
Preference number: 5 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLMTLAI*SPREGF
Trigger: GAACCCTTCCCTTGGGGACAAGATTGCCAGGGTCAT...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGAAGACTCGTAGATGCTaGATCTTGCGAGTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVKTRRC*ILRVSP
Trigger: CGGAGAGACTCGCAAGATCAAGCATCTACGAGTCTT...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGGGCACGGCTCTTCTGTaGGTGGGAAAGAGCATAGTA +
Preference number: 5 (lower is better)
Translates to: MELGREEKPCFQRNERQRGTALL*VGKSIV
Trigger: TACTATGCTCTTTCCCACCAACAGAAGAGCCGTGCC...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTGGGTCAAAGAAGACCTaGGAAATAAAGTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIGSKKT*EIKSSG
Trigger: GCCTGAGGACTTTATTTCCAAGGTCTTCTTTGACCC...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTCCTCACCGCCACCCTaGGCTGTCCCTTCTACTGTC +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLSSPPP*AVPSTV
Trigger: GACAGTAGAAGGGACAGCCAAGGGTGGCGGTGAGGA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GCTTGTCTTCCAGTATGCCCAAAAAGCAGCTTGAGCTGGTGGGCTGAACCCAGGCAGGTAAAATCCTCTTaGCAAATTCAAGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: ACLPVCPKSSLSWWAEPRQVKSS*QIQAPL
Trigger: GAGAGGTGCTTGAATTTGCAAAGAGGATTTTACCTG...CCTGGGTTCAGCCCACCAGCTCAAGCTGCTTTTTGGGCATACTGGAAGACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp GAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGCAGCCCGTGGAGGTTAAGAAATaGGACCACTTACTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: EAPKPLTELSKEPGLVQPVEVKK*DHLLGH
Trigger: ATGCCCAAGTAAGTGGTCCAATTTCTTAACCTCCAC...GGGCTGCACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGATGATGACTTCTAGTTaGGGGTGTTCACCCAATACT +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEMMTSS*GCSPNT
Trigger: AGTATTGGGTGAACACCCCAAACTAGAAGTCATCAT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTCACAAAGAGCCATGTaGTGGCGAGCTTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTSQRAM*WRACSH
Trigger: GTGGCTGCAAGCTCGCCACAACATGGCTCTTTGTGA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: TKPKIIKKACIPFVLPVALPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTGCCCTGCTGGAGGCTCTGTTGTGTGGCTTAGAACCCCTTGATGTAGCAATAGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 5 (lower is better)
Translates to: PALLEALLCGLEPLDVAIVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...TATTGCTACATCAAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGCAGAATTGGAAAGGCTaGGGCAAAGAGGGACAATTG +
Preference number: 5 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVQNWKG*GKEGQL
Trigger: CAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTG...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATAGCCACTGGCTTCTATaGCAGCACCAGTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LGREEKPCFQRNERQRNNSHWLL*QHQLSS
Trigger: GGAGGACAACTGGTGCTGCAATAGAAGCCAGTGGCT...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGGATGACACCCTCCTaGCAGTCCGATGACCCTGAA +
Preference number: 5 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGARMTPS*QSDDPE
Trigger: TTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCT...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTCGTAGATGCTTGATCTaGCGAGTCTCTCCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTRRCLI*RVSPSG
Trigger: CCCAGACGGAGAGACTCGCAAGATCAAGCATCTACG...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACGTAGATGCTTGATCTaGCGAGTCTCTCCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARRRCLI*RVSPSG
Trigger: CCCAGACGGAGAGACTCGCAAGATCAAGCATCTACG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGAAGACTCGTAGATGCTaGATCTTGCGAGTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: GHMELGREEKPCFQRNERKTRRC*ILRVSP
Trigger: CGGAGAGACTCGCAAGATCAAGCATCTACGAGTCTT...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGATAATTCCTCGGTGTTaGTCTGTGCGGTACTTTTTG +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEIIPRC*SVRYFL
Trigger: CAAAAAGTACCGCACAGACAAACACCGAGGAATTAT...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGGTGAGTTTTGCTTCAGATCCTaGAGAATCCGGATCATCTCT +
Preference number: 5 (lower is better)
Translates to: PPAPVEAPVRSLVPCVGEFCFRS*RIRIIS
Trigger: AGAGATGATCCGGATTCTCAAGGATCTGAAGCAAAA...CTCACCCACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCCATCATACGAGTGGCTaGGATACGGTAGAAGGCACG +
Preference number: 5 (lower is better)
Translates to: WAERRNPASKEMRGKGIIHHTSG*DTVEGT
Trigger: CGTGCCTTCTACCGTATCCAAGCCACTCGTATGATG...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCCACATACATGGTCTTaGACATGTCTCCCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GHMELGREEKPCFQRNERPHTWS*TCLPLS
Trigger: GGAAAGGGGGAGACATGTCAAAGACCATGTATGTGG...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTTCCTCTATGCGGACATaGCTCAACCTTACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGISSMRT*LNLTKK
Trigger: CTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGGA...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGGCAAGGGAAGACTGTaGAATATTGCTGGAGGCATC +
Preference number: 5 (lower is better)
Translates to: GHMELGREEKPCFQRNERGKGRL*NIAGGI
Trigger: GATGCCTCCAGCAATATTCAACAGTCTTCCCTTGCC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ATGGGAACTGGTAGGAGGCTAAGGTGTGCAGGGCTTGTCTTCCAGTATGCCCAACTATTTAATAGGGCTTaGGGAAACATTACAGGGGGA +
Preference number: 5 (lower is better)
Translates to: MGTGRRLRCAGLVFQYAQLFNRA*GNITGG
Trigger: TCCCCCTGTAATGTTTCCCAAAGCCCTATTAAATAG...TTGGGCATACTGGAAGACAAGCCCTGCACACCTTAGCCTCCTACCAGTTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp TGGGTAGGTCACATCCCTAGTCTGGGCTTCCCATTCCTCATCTGCAGTGATCTGATGTTAGCAAGAGACTaGACCCTAAAGTCCTCATGT +
Preference number: 5 (lower is better)
Translates to: WVGHIPSLGFPFLICSDLMLARD*TLKSSC
Trigger: ACATGAGGACTTTAGGGTCAAGTCTCTTGCTAACAT...CAGATCACTGCAGATGAGGAATGGGAAGCCCAGACTAGGGATGTGACCTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGGTCTTCTTGATCAGTTaGTCCACCGTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVVFLIS*STVVLN
Trigger: GTTCAAGACTACGGTGGACAAACTGATCAAGAAGAC...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGTTGTGGCGAGCTaGCAGCCACGGGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEHVVAS*QPRGPP
Trigger: TGGTGGCCCCCGTGGCTGCAAGCTCGCCACAACATG...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGCTGCTGGAGGCTCTGTaGTGTGGCTTAGAACCCCTT +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLLLEAL*CGLEPL
Trigger: AAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: ESLKIRGQFRDDILCLFILPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GGCAAACGTATCTGGGACAGAGGTGCCAAATGCCACGAAAACAACAGCTGTGACGGCAAAGAGGGACAATaGCTTTTTGTATCTGACTTG +
Preference number: 5 (lower is better)
Translates to: GKRIWDRGAKCHENNSCDGKEGQ*LFVSDL
Trigger: CAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCC...GTCACAGCTGTTGTTTTCGTGGCATTTGGCACCTCTGTCCCAGATACGTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494208.5
CDS-3UTR CAA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCT +
Preference number: 5 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKSSSSP*SSHTIP
Trigger: AGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACTCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCT +
Preference number: 5 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHSSSSP*SSHTIP
Trigger: AGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGA...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGATGACCCTGGCAATCTaGTCCCCAAGGGAAGGGTTC +
Preference number: 5 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVMTLAI*SPREGF
Trigger: GAACCCTTCCCTTGGGGACAAGATTGCCAGGGTCAT...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCGTAGATGCTTGATCTaGCGAGTCTCTCCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKRRCLI*RVSPSG
Trigger: CCCAGACGGAGAGACTCGCAAGATCAAGCATCTACG...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGGTCTGTAGGGCACGGAGATCTCTTTCTCCAAAAACCCAGGCTCCAAGGGATTATAATTCCTCGGTGTTaGTCTGTGCGGTACTTTTTG +
Preference number: 5 (lower is better)
Translates to: RSVGHGDLFLQKPRLQGIIIPRC*SVRYFL
Trigger: CAAAAAGTACCGCACAGACAAACACCGAGGAATTAT...AATCCCTTGGAGCCTGGGTTTTTGGAGAAAGAGATCTCCGTGCCCTACAGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGGCACGGCTCTTCTGTaGGTGGGAAAGAGCATAGTA +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTGTALL*VGKSIV
Trigger: TACTATGCTCTTTCCCACCAACAGAAGAGCCGTGCC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTCATCATACGAGTGGCTaGGATACGGTAGAAGGCACG +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTHHTSG*DTVEGT
Trigger: CGTGCCTTCTACCGTATCCAAGCCACTCGTATGATG...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGGCAAGGGAAGACTGTaGAATATTGCTGGAGGCATC +
Preference number: 5 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLGKGRL*NIAGGI
Trigger: GATGCCTCCAGCAATATTCAACAGTCTTCCCTTGCC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTGTTTGTGGTCTACTCACATAATGTGGAGGTTAAGAAATTGGACCACTTACTTTCTCCCCAGGGAACCTaGACACCCTGGGAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LFVVYSHNVEVKKLDHLLSPQGT*TPWEAA
Trigger: AGCAGCTTCCCAGGGTGTCAAGGTTCCCTGGGGAGA...AAGTAAGTGGTCCAATTTCTTAACCTCCACATTATGTGAGTAGACCACAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTTGCCAGGGCCTAAGTaGGGTGAAGTTCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDLPGPK*GEVPGA
Trigger: AGCCCCAGGAACTTCACCCAACTTAGGCCCTGGCAA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: WAERRNPASKEMRGKGIIGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTSHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAAGCTCCTCCTGCTCCAGTTGAAGCTCCTGTAAGATCTTTAGTACCCTGCGTGTATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KAPPAPVEAPVRSLVPCVYSQPS*YRALGS
Trigger: GCTTCCTAATGCTCTATACAAAGAGGGCTGACTATA...CACGCAGGGTACTAAAGATCTTACAGGAGCTTCAACTGGAGCAGGAGGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGCATCATACGAGTGGCTaGGATACGGTAGAAGGCACG +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLHHTSG*DTVEGT
Trigger: CGTGCCTTCTACCGTATCCAAGCCACTCGTATGATG...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCGTCTTCTTGATCAGTTaGTCCACCGTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: WAERRNPASKEMRGKGIIVFLIS*STVVLN
Trigger: GTTCAAGACTACGGTGGACAAACTGATCAAGAAGAC...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTCACAAAGAGCCATGTaGTGGCGAGCTTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDSQRAM*WRACSH
Trigger: GTGGCTGCAAGCTCGCCACAACATGGCTCTTTGTGA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCTGCTGGAGGCTCTGTaGTGTGGCTTAGAACCCCTT +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDLLEAL*CGLEPL
Trigger: AAGGGGTTCTAAGCCACACAACAGAGCCTCCAGCAG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 5 (lower is better)
Translates to: MELGREEKPCFQRNERQRVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...CCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGGGCAAAGAGGGACAATaGCTTTTTGTATCTGACTTG +
Preference number: 5 (lower is better)
Translates to: GHMELGREEKPCFQRNERGKEGQ*LFVSDL
Trigger: CAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCC...CCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACAGAATTGGAAAGGCTaGGGCAAAGAGGGACAATTG +
Preference number: 5 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAQNWKG*GKEGQL
Trigger: CAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGTCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVSHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTCTTCCAGTAGCCCTTaGTCGTCACACACCATTCCT +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLSSSSP*SSHTIP
Trigger: AGGAATGGTGTGTGACGACAAAGGGCTACTGGAAGA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATAGCCACTGGCTTCTATaGCAGCACCAGTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDSHWLL*QHQLSS
Trigger: GGAGGACAACTGGTGCTGCAATAGAAGCCAGTGGCT...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATAGGATGACACCCTCCTaGCAGTCCGATGACCCTGAA +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDRMTPS*QSDDPE
Trigger: TTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCT...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGGTGCTGGTTTCTCCATaGGGTTTCTTAATTGTCACC +
Preference number: 5 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLVLVSP*GFLIVT
Trigger: GGTGACAATTAAGAAACCCAATGGAGAAACCAGCAC...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACATGATGATGAACATGTaGAAGGCTGCACTCCCTACA +
Preference number: 5 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHMMMNM*KAALPT
Trigger: TGTAGGGAGTGCAGCCTTCAACATGTTCATCATCAT...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCAAGACTCGTAGATGCTaGATCTTGCGAGTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAKTRRC*ILRVSP
Trigger: CGGAGAGACTCGCAAGATCAAGCATCTACGAGTCTT...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATGGGTCAAAGAAGACCTaGGAAATAAAGTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LGREEKPCFQRNERQRNNGSKKT*EIKSSG
Trigger: GCCTGAGGACTTTATTTCCAAGGTCTTCTTTGACCC...ATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCCCACATACATGGTCTTaGACATGTCTCCCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: TKPKIIKKACIPFVLPVAPHTWS*TCLPLS
Trigger: GGAAAGGGGGAGACATGTCAAAGACCATGTATGTGG...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGTCCTCACCGCCACCCTaGGCTGTCCCTTCTACTGTC +
Preference number: 5 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIESSPPP*AVPSTV
Trigger: GACAGTAGAAGGGACAGCCAAGGGTGGCGGTGAGGA...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AGTTCAGAGGCCCCAAAGCCCCTAACTGAATTAAGTAAAGAACCTGGGCTAGTGGACGGGGCTCTGTCTTaGTGGTTTATATATGTATCA +
Preference number: 5 (lower is better)
Translates to: SSEAPKPLTELSKEPGLVDGALS*WFIYVS
Trigger: TGATACATATATAAACCACAAAGACAGAGCCCCGTC...CACTAGCCCAGGTTCTTTACTTAATTCAGTTAGGGGCTTTGGGGCCTCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp GGCCAATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATGCTTATTGTTCTCCTTaGACTACTTTTTCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: GQLQGLGDAQRYLPGLPHAYCSP*TTFSVR
Trigger: CCTTACTGAAAAAGTAGTCAAAGGAGAACAATAAGC...ATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS CCA 90 bp AAATGGGAATTCATCATTTTCCCATCCATCTCAATGCCCTTAGGGTaGTCACCCTCTGTCTCTATGATAATTCCTCGGTGTTTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: KWEFIIFPSISMPLG*SPSVSMIIPRCLSV
Trigger: CACAGACAAACACCGAGGAATTATCATAGAGACAGAGGGTGACCACCCTAAGGGCATTGAGATGGATGGGAAAATGATGAATTCCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS-3UTR CAA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGAGTCTTCTTGATCAGTTaGTCCACCGTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARVFLIS*STVVLN
Trigger: GTTCAAGACTACGGTGGACAAACTGATCAAGAAGAC...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATAAGACATTGACGGCGTaGCTGCCCGTCACGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHKTLTA*LPVTLP
Trigger: TGGCAACGTGACGGGCAGCAACGCCGTCAATGTCTT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 5 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GTGTCTAAAAATTCATGTTTCTCTCTGTTGGCTCGGACCTGGAATTCCTTTGTGCAGAATTGGAAAGGCTaGGGCAAAGAGGGACAATTG +
Preference number: 5 (lower is better)
Translates to: VSKNSCFSLLARTWNSFVQNWKG*GKEGQL
Trigger: CAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTG...CACAAAGGAATTCCAGGTCCGAGCCAACAGAGAGAAACATGAATTTTTAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTTCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: ESLKIRGQFRDDILCLFISHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAAATGAGAGGCAAAGGAATAATCTATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: WAERRNPASKEMRGKGIIYSQPS*YRALGS
Trigger: GCTTCCTAATGCTCTATACAAAGAGGGCTGACTATA...GATTATTCCTTTGCCTCTCATTTCTTTGGAAGCAGGGTTTCTCCTCTCTGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGTATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKYSQPS*YRALGS
Trigger: GCTTCCTAATGCTCTATACAAAGAGGGCTGACTATA...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTGTGCTGGTTTCTCCATaGGGTTTCTTAATTGTCACC +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTVLVSP*GFLIVT
Trigger: GGTGACAATTAAGAAACCCAATGGAGAAACCAGCAC...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTATGATGATGAACATGTaGAAGGCTGCACTCCCTACA +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTMMMNM*KAALPT
Trigger: TGTAGGGAGTGCAGCCTTCAACATGTTCATCATCAT...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TGGAGCCAAGAGGTGGCAGGAGAGCATGTGTCTAAAAATTCATGTTTCTCTCTGTTTTGCTTCAGATCCTaGAGAATCCGGATCATCTCT +
Preference number: 5 (lower is better)
Translates to: WSQEVAGEHVSKNSCFSLFCFRS*RIRIIS
Trigger: AGAGATGATCCGGATTCTCAAGGATCTGAAGCAAAA...CAGAGAGAAACATGAATTTTTAGACACATGCTCTCCTGCCACCTCTTGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGCTGACATTTCTCAGGCACCTTCTCTGGGTGTTTTaGCTTCAGATCCTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: LYRALGSKSVVKLTFLRHLLWVF*LQILEN
Trigger: ATTCTCAAGGATCTGAAGCAAAAACACCCAGAGAAG...GTGCCTGAGAAATGTCAGCTTCACCACGCTCTTGCTTCCTAATGCTCTATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATCATCATACGAGTGGCTaGGATACGGTAGAAGGCACG +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDHHTSG*DTVEGT
Trigger: CGTGCCTTCTACCGTATCCAAGCCACTCGTATGATG...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGGGTCAAAGAAGACCTaGGAAATAAAGTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLGSKKT*EIKSSG
Trigger: GCCTGAGGACTTTATTTCCAAGGTCTTCTTTGACCC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGATCCTCTATGCGGACATaGCTCAACCTTACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARSSMRT*LNLTKK
Trigger: CTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGGA...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACCAACCCAACATTTCCACTGGCAACTGTCAACATAGCTTATGACATGAGCACTTCCTCTATGCGGACATaGCTCAACCTTACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: TNPTFPLATVNIAYDMSTSSMRT*LNLTKK
Trigger: CTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGGA...AGTGCTCATGTCATAAGCTATGTTGACAGTTGCCAGTGGAAATGTTGGGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCGATGTCCGCAGAACCTaGACCTCCATAACACCAATA +
Preference number: 5 (lower is better)
Translates to: TKPKIIKKACIPFVLPVADVRRT*TSITPI
Trigger: TATTGGTGTTATGGAGGTCAAGGTTCTGCGGACATC...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TCCGCTCCTTTCTGTTTGTCTCTGAGTGTTCCTAAGAAAAAGAAAGAGTATGTAGCTGTGGAACTTCCTTaGGCTGTCCTGCTAGGAGAT +
Preference number: 5 (lower is better)
Translates to: SAPFCLSLSVPKKKKEYVAVELP*AVLLGD
Trigger: ATCTCCTAGCAGGACAGCCAAAGGAAGTTCCACAGC...TACATACTCTTTCTTTTTCTTAGGAACACTCAGAGACAAACAGAAAGGAGCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp CTGTTTGTGGTCTACTCACATAATGTGGAGGTTAAGAAATTGGACCACTTACTTCAGGAAAGATTTCCCTaGGCCCAGCCAGAAAAGTCC +
Preference number: 5 (lower is better)
Translates to: LFVVYSHNVEVKKLDHLLQERFP*AQPEKS
Trigger: GGACTTTTCTGGCTGGGCCAAGGGAAATCTTTCCTG...AAGTAAGTGGTCCAATTTCTTAACCTCCACATTATGTGAGTAGACCACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp CTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATCAGGGCCTTGCAGGGTGTTaGACTTTAGATCTTGGCACA +
Preference number: 5 (lower is better)
Translates to: LSIPSTISKELQPKPLNQGLAGC*TLDLGT
Trigger: TGTGCCAAGATCTAAAGTCAAACACCCTGCAAGGCC...CTGATTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTAGTGAGGTGCTGGATTTaGGGGACAGAGGACATGTTG +
Preference number: 5 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLVRCWI*GTEDML
Trigger: CAACATGTCCTCTGTCCCCAAAATCCAGCACCTCAC...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS TCA 90 bp GTCCGCAGAACCTTGACCTCCATAACACCAATACTCTCACTGACATaGATAGTATCACATTCAAAAGTGAAGATGCCTGCATGGTCATCA +
Preference number: 5 (lower is better)
Translates to: VRRTLTSITPILSLT*IVSHSKVKMPAWSS
Trigger: TGATGACCATGCAGGCATCTTCACTTTTGAATGTGATACTATTCATGTCAGTGAGAGTATTGGTGTTATGGAGGTCAAGGTTCTGCGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS TCA 90 bp GCGCTGATATTCCACGTTCCATCCATTTCGGTTCACCAAGGGCAATaGAGAAATTCTCTTGCCTTTCGTATTCCTCCTCATCTACTATTT +
Preference number: 5 (lower is better)
Translates to: ALIFHVPSISVHQGQ*RNSLAFRIPPHLLF
Trigger: AAATAGTAGATGAGGAGGAATACGAAAGGCAAGAGAATTTCTTCATTGCCCTTGGTGAACCGAAATGGATGGAACGTGGAATATCAGCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381269.6
ENST00000534137.5
CDS-3UTR CAA 90 bp GAGATAATAGGGACATATGGAATTGGGCAGAGAGGAGAAACCCTGCTTCCAAAGAATGAAGAAATTCTCTaGCCTTTCGTATTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: EIIGTYGIGQRGETLLPKNEEIL*PFVFLL
Trigger: GAGGAGGAATACGAAAGGCAAGAGAATTTCTTCATT...CTTTGGAAGCAGGGTTTCTCCTCTCTGCCCAATTCCATATGTCCCTATTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000381269.6
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGGTCTTCTTGATCAGTTaGTCCACCGTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLVFLIS*STVVLN
Trigger: GTTCAAGACTACGGTGGACAAACTGATCAAGAAGAC...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATTCACAAAGAGCCATGTaGTGGCGAGCTTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHSQRAM*WRACSH
Trigger: GTGGCTGCAAGCTCGCCACAACATGGCTCTTTGTGA...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGATGGGGAACTGGATCTaGATGGAGCCAAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEMGNWI*MEPRGG
Trigger: GCCACCTCTTGGCTCCATCAAGATCCAGTTCCCCAT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATTCCCATCTCTTCTATTaGGCGGGTCTTCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDSHLFY*AGLPAE
Trigger: TTCTGCAGGAAGACCCGCCAAATAGAAGAGATGGGA...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGATGACCCTGGCAATCTaGTCCCCAAGGGAAGGGTTC +
Preference number: 5 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEMTLAI*SPREGF
Trigger: GAACCCTTCCCTTGGGGACAAGATTGCCAGGGTCAT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAATAATTCCTCGGTGTTaGTCTGTGCGGTACTTTTTG +
Preference number: 5 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGAIIPRC*SVRYFL
Trigger: CAAAAAGTACCGCACAGACAAACACCGAGGAATTAT...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CAAAAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCACTTCTCTGGGTGTTTTaGCTTCAGATCCTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: QKPRLQGIMTTKIPLTGALLWVF*LQILEN
Trigger: ATTCTCAAGGATCTGAAGCAAAAACACCCAGAGAAG...TGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAACCCAGGCTCCAAGGGATTATGACAACTAAGATTCCTCTTACTGGAGCAAGACTTCTCTGGGTGTTTTaGCTTCAGATCCTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: KPRLQGIMTTKIPLTGARLLWVF*LQILEN
Trigger: ATTCTCAAGGATCTGAAGCAAAAACACCCAGAGAAG...TCTTGCTCCAGTAAGAGGAATCTTAGTTGTCATAATCCCTTGGAGCCTGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTCCTCTATGCGGACATaGCTCAACCTTACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLSSMRT*LNLTKK
Trigger: CTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGGA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGGCAAGGGAAGACTGTaGAATATTGCTGGAGGCATC +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDGKGRL*NIAGGI
Trigger: GATGCCTCCAGCAATATTCAACAGTCTTCCCTTGCC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGATGTCCGCAGAACCTaGACCTCCATAACACCAATA +
Preference number: 5 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIDVRRT*TSITPI
Trigger: TATTGGTGTTATGGAGGTCAAGGTTCTGCGGACATC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACAAAGCCAAAGATAATCAAGAAGGCCTGTATCCCTTTTGTTCTTCCAGTAGCCTTATGGTTTTCCTCTTaGAGCTTCCGTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TKPKIIKKACIPFVLPVALWFSS*SFRFFS
Trigger: GCTGAAGAAACGGAAGCTCAAAGAGGAAAACCATAA...GGCTACTGGAAGAACAAAAGGGATACAGGCCTTCTTGATTATCTTTGGCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216568.11
CDS-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTGTCTTCTTGATCAGTTaGTCCACCGTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIVFLIS*STVVLN
Trigger: GTTCAAGACTACGGTGGACAAACTGATCAAGAAGAC...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 5 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGGACCTGGAATTCCTTaGTGGCACCTTTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDGPGIP*WHLFHS
Trigger: TGAGTGAAAAAGGTGCCACAAAGGAATTCCAGGTCC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ACACACAGAATTGGAAAGGCTTGGGCAAAGAGGGACAATTGCTTTTTGTATCTGTATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: THRIGKAWAKRDNCFLYLYSQPS*YRALGS
Trigger: GCTTCCTAATGCTCTATACAAAGAGGGCTGACTATA...CAGATACAAAAAGCAATTGTCCCTCTTTGCCCAAGCCTTTCCAATTCTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AAATATAGTCAGCCCTCTTTGTATAGAGCATTAGGAAGCAAGAGCGTGGTGAAGTATAGTCAGCCCTCTTaGTATAGAGCATTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KYSQPSLYRALGSKSVVKYSQPS*YRALGS
Trigger: GCTTCCTAATGCTCTATACAAAGAGGGCTGACTATA...CTTCACCACGCTCTTGCTTCCTAATGCTCTATACAAAGAGGGCTGACTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTATGATGATGAACATGTaGAAGGCTGCACTCCCTACA +
Preference number: 5 (lower is better)
Translates to: ESLKIRGQFRDDILCLFIMMMNM*KAALPT
Trigger: TGTAGGGAGTGCAGCCTTCAACATGTTCATCATCAT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGGGCACGGCTCTTCTGTaGGTGGGAAAGAGCATAGTA +
Preference number: 5 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEGTALL*VGKSIV
Trigger: TACTATGCTCTTTCCCACCAACAGAAGAGCCGTGCC...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGGCACGGCTCTTCTGTaGGTGGGAAAGAGCATAGTA +
Preference number: 5 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHGTALL*VGKSIV
Trigger: TACTATGCTCTTTCCCACCAACAGAAGAGCCGTGCC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTGTTTGTGGTCTACTCACATAATGTGGAGGTTAAGAAATTGGACCACTTACTTCTGCTAGGAGATACTTaGTACTCACAGTGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LFVVYSHNVEVKKLDHLLLLGDT*YSQCPS
Trigger: GGAAGGACACTGTGAGTACAAAGTATCTCCTAGCAG...AAGTAAGTGGTCCAATTTCTTAACCTCCACATTATGTGAGTAGACCACAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp GACCCTTTCCATACCTTCAACTATATCCAAAGAGCTTCAGCCAAAGCCACTAAATTAAAGCCTCAAATGTaGTTAGCTGTTGTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: DPFHTFNYIQRASAKATKLKPQM*LAVVLA
Trigger: GGCCAAGACAACAGCTAACAACATTTGAGGCTTTAA...TTTAGTGGCTTTGGCTGAAGCTCTTTGGATATAGTTGAAGGTATGGAAAGGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS TCA 90 bp CATCTGATATTCCACGTTCCATCCATTTCGGTTCACCAAGGGCAATaGAGAAATTCTCTTGCCTTTCGTATTCCTCCTCATCTACTATTT +
Preference number: 5 (lower is better)
Translates to: HLIFHVPSISVHQGQ*RNSLAFRIPPHLLF
Trigger: AAATAGTAGATGAGGAGGAATACGAAAGGCAAGAGAATTTCTTCATTGCCCTTGGTGAACCGAAATGGATGGAACGTGGAATATCAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216568.11
ENST00000356921.7
CDS TCA 90 bp AACCTGATATTCCACGTTCCATCCATTTCGGTTCACCAAGGGCAATaGAGAAATTCTCTTGCCTTTCGTATTCCTCCTCATCTACTATTT +
Preference number: 5 (lower is better)
Translates to: NLIFHVPSISVHQGQ*RNSLAFRIPPHLLF
Trigger: AAATAGTAGATGAGGAGGAATACGAAAGGCAAGAGAATTTCTTCATTGCCCTTGGTGAACCGAAATGGATGGAACGTGGAATATCAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGTGCTGGTTTCTCCATaGGGTTTCTTAATTGTCACC +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDVLVSP*GFLIVT
Trigger: GGTGACAATTAAGAAACCCAATGGAGAAACCAGCAC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTCTTCTCTGGGTGTTTTaGCTTCAGATCCTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: ESLKIRGQFRDDILCLFILLWVF*LQILEN
Trigger: ATTCTCAAGGATCTGAAGCAAAAACACCCAGAGAAG...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp AATTGCAAGGACTTGGAGATGCCCAAAGGTATCTGCCTGGCTTACCTCATTATTATGGTGTCTGTCACATaGAAAGTGCTCAAGAAATAT +
Preference number: 5 (lower is better)
Translates to: NCKDLEMPKGICLAYLIIMVSVT*KVLKKY
Trigger: ATATTTCTTGAGCACTTTCAATGTGACAGACACCAT...AATAATGAGGTAAGCCAGGCAGATACCTTTGGGCATCTCCAAGTCCTTGCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp GAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGACATCTTATGTCTGTTTATTAATGAAGAAATTCTCTaGCCTTTCGTATTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: ESLKIRGQFRDDILCLFINEEIL*PFVFLL
Trigger: GAGGAGGAATACGAAAGGCAAGAGAATTTCTTCATT...AATAAACAGACATAAGATGTCATCACGAAACTGCCCACGGATCTTTAGGCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000381269.6
CDS-3UTR CAA 90 bp AAATGTATTTATGTCAATGCAGAAAGCCTAAAGATCCGTGGGCAGTTTCGTGATGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 5 (lower is better)
Translates to: KCIYVNAESLKIRGQFRDVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...ATCACGAAACTGCCCACGGATCTTTAGGCTTTCTGCATTGACATAAATACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTGTTTGTGGTCTACTCACATAATGTGGAGGTTAAGAAATTGGACCACTTACTTTTCAGTAAGGGAAGTTaGCCATCCCATAATATCTCC +
Preference number: 5 (lower is better)
Translates to: LFVVYSHNVEVKKLDHLLFSKGS*PSHNIS
Trigger: GGAGATATTATGGGATGGCAAACTTCCCTTACTGAA...AAGTAAGTGGTCCAATTTCTTAACCTCCACATTATGTGAGTAGACCACAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS CCA 90 bp TCCTTTGGGAATGTTGTTGCTGAATCTCTTAGCTCTGTCCTCGTGTaGAAAGTTTTATGCTGCTCTTTGTCACATGAATATGAACTAATT +
Preference number: 5 (lower is better)
Translates to: SFGNVVAESLSSVLV*KVLCCSLSHEYELI
Trigger: AATTAGTTCATATTCATGTGACAAAGAGCAGCATAAAACTTTCCACACGAGGACAGAGCTAAGAGATTCAGCAACAACATTCCCAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS-3UTR CAA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGATGATGATGAACATGTaGAAGGCTGCACTCCCTACA +
Preference number: 5 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIEMMMNM*KAALPT
Trigger: TGTAGGGAGTGCAGCCTTCAACATGTTCATCATCAT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp ATGCCTGATTTTAACTGTCATATGGGGCATTTATTCACGAACCACCAACAGTTAAATTCAGCTACTCTCTaGAAGGATATGTTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: MPDFNCHMGHLFTNHQQLNSATL*KDMFAW
Trigger: CCAAGCAAACATATCCTTCAAGAGAGTAGCTGAATT...TAACTGTTGGTGGTTCGTGAATAAATGCCCCATATGACAGTTAAAATCAGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGTGGAGGTGGATTTGTaGCTGTTGCTTGTTTGTATT +
Preference number: 5 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHVEVDL*LLLVCI
Trigger: AATACAAACAAGCAACAGCAACAAATCCACCTCCAC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATGGCAAAGAGGGACAATaGCTTTTTGTATCTGACTTG +
Preference number: 5 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHGKEGQ*LFVSDL
Trigger: CAAGTCAGATACAAAAAGCAATTGTCCCTCTTTGCC...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000394330.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATATAATTCCTCGGTGTTaGTCTGTGCGGTACTTTTTG +
Preference number: 5 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHIIPRC*SVRYFL
Trigger: CAAAAAGTACCGCACAGACAAACACCGAGGAATTAT...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp CTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGCATTTTTGCTTCAGATCCTaGAGAATCCGGATCATCTCT +
Preference number: 5 (lower is better)
Translates to: LSFYTTSRNIVSPLCIEHFCFRS*RIRIIS
Trigger: AGAGATGATCCGGATTCTCAAGGATCTGAAGCAAAA...ATGCTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS-3UTR CAA 90 bp TCTCTAAGTTTTTACACCACTTCAAGAAATATAGTCAGCCCTCTTTGTATAGAGAATGAAGAAATTCTCTaGCCTTTCGTATTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SLSFYTTSRNIVSPLCIENEEIL*PFVFLL
Trigger: GAGGAGGAATACGAAAGGCAAGAGAATTTCTTCATT...CTCTATACAAAGAGGGCTGACTATATTTCTTGAAGTGGTGTAAAAACTTAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216568.11
ENST00000356921.7
ENST00000381269.6
CDS CAA 90 bp GCAGCCCGGCGCGCCCTGGCGGCTCCGAGGGACCTGGGCTCGGGCTaGCGGTCGCGTCGCCTGGGCTTTCCCTGGGCTGGGAGCGCGCCG +
Preference number: 6 (lower is better)
Translates to: AARRALAAPRDLGSG*RSRRLGFPWAGSAP
Trigger: CGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTCCCTCGGAGCCGCCAGGGCGCGCCGGGCTGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CAA 90 bp GTCGCCTGGGCTTTCCCTGGGCTGGGAGCGCGCCGGGTCTCCGCCTaGCACGCTGTCACCGCGGGAGACGTCTCGGCCTCGCCGCGCGCA +
Preference number: 6 (lower is better)
Translates to: VAWAFPGLGARRVSA*HAVTAGDVSASPRA
Trigger: TGCGCGCGGCGAGGCCGAGACGTCTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 72 bp GCGCCCTGGCGGCTCCGAGGGACCTGGGCTCGGGCTTaGGGTCGCGTCGCCTGGGCTTTCCCTGGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: APWRLRGTWARA*GRVAWAFPGLG
Trigger: TCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCAAGCCCGAGCCCAGGTCCCTCGGAGCCGCCAGGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 72 bp GGCTCGGGCTTGCGGTCGCGTCGCCTGGGCTTTCCCTaGGCTGGGAGCGCGCCGGGTCTCCGCCTTGCACGC +
Preference number: 6 (lower is better)
Translates to: GSGLRSRRLGFP*AGSAPGLRLAR
Trigger: GCGTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCAAGCCCGAGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 72 bp AGGAAGGGGCAGGAAGGCAAGCAGCCCGGCGCGCCCTaGCGGCTCCGAGGGACCTGGGCTCGGGCTTGCGGT +
Preference number: 6 (lower is better)
Translates to: RKGQEGKQPGAP*RLRGTWARACG
Trigger: ACCGCAAGCCCGAGCCCAGGTCCCTCGGAGCCGCCAGGGCGCGCCGGGCTGCTTGCCTTCCTGCCCCTTCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 72 bp CTTTCCCTGGGCTGGGAGCGCGCCGGGTCTCCGCCTTaGACGCTGTCACCGCGGGAGACGTCTCGGCCTCGC +
Preference number: 6 (lower is better)
Translates to: LSLGWERAGSPP*TLSPRETSRPR
Trigger: GCGAGGCCGAGACGTCTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 72 bp GGGCTTGCGGTCGCGTCGCCTGGGCTTTCCCTGGGCTaGGAGCGCGCCGGGTCTCCGCCTTGCACGCTGTCA +
Preference number: 6 (lower is better)
Translates to: GLAVASPGLSLG*ERAGSPPCTLS
Trigger: TGACAGCGTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGCCCAGGCGACGCGACCGCAAGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CAA 72 bp GCTTTCCCTGGGCTGGGAGCGCGCCGGGTCTCCGCCTaGCACGCTGTCACCGCGGGAGACGTCTCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: AFPGLGARRVSA*HAVTAGDVSAS
Trigger: CGAGGCCGAGACGTCTCCCGCGGTGACAGCGTGCAAGGCGGAGACCCGGCGCGCTCCCAGCCCAGGGAAAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 72 bp TTCAGAAAGAGGGAAACCCCGACCCAGAGCGGTGACTaGAATCTACGCCCGGGAGAGGCCCGGAGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: FRKRETPTQSGD*NLRPGEARSPG
Trigger: GCCGGGACTCCGGGCCTCTCCCGGGCGTAGATTCCAGTCACCGCTCTGGGTCGGGGTTTCCCTCTTTCTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS TCA 72 bp GGATTTCAGAAAGAGGGAAACCCCGACCCAGAGCGGTaGCTGGAATCTACGCCCGGGAGAGGCCCGGAGTCC +
Preference number: 6 (lower is better)
Translates to: GFQKEGNPDPER*LESTPGRGPES
Trigger: GGACTCCGGGCCTCTCCCGGGCGTAGATTCCAGTCACCGCTCTGGGTCGGGGTTTCCCTCTTTCTGAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 72 bp CCGATGACCCTGAACAGGACTCATTGTTCTGCCCTGTaGTTGGCACGTCCCCTGAGCCACCAGCCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: PMTLNRTHCSAL*LARPLSHQPLL
Trigger: GAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTGTTCAGGGTCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 72 bp GGGGAGGCTAGGACAGCCCGAGGCAAGGGAAGACTGTaGAATATTGCTGGAGGCATCCCCTCCTCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GEARTARGKGRL*NIAGGIPSSGC
Trigger: GCAGCCAGAGGAGGGGATGCCTCCAGCAATATTCAACAGTCTTCCCTTGCCTCGGGCTGTCCTAGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 72 bp CCCTCCTTGCAGTCCGATGACCCTGAACAGGACTCATaGTTCTGCCCTGTGCTTGGCACGTCCCCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: PSLQSDDPEQDS*FCPVLGTSPEP
Trigger: TGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTGTTCAGGGTCATCGGACTGCAAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 90 bp AGGATGACACCCTCCTTGCAGTCCGATGACCCTGAACAGGACTCATaGTTCTGCCCTGTGCTTGGCACGTCCCCTGAGCCACCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: RMTPSLQSDDPEQDS*FCPVLGTSPEPPAS
Trigger: AGAGGCTGGTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTGTTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 90 bp TGCAGTCCGATGACCCTGAACAGGACTCATTGTTCTGCCCTGTGCTaGGCACGTCCCCTGAGCCACCAGCCTCTGCTCGAAGACCATTCA +
Preference number: 6 (lower is better)
Translates to: CSPMTLNRTHCSALC*ARPLSHQPLLEDHS
Trigger: TGAATGGTCTTCGAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTGTTCAGGGTCATCGGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS TCA 72 bp CAAGGGAAGGGTTCTCCGGGTACCAGATTGGCAGGATaGCACCCTCCTTGCAGTCCGATGACCCTGAACAGG +
Preference number: 6 (lower is better)
Translates to: QGKGSPGTRLAG*HPPCSPMTLNR
Trigger: CCTGTTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCTGCCAATCTGGTACCCGGAGAACCCTTCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CCA 72 bp GCATCAGGTGTGTCCAAACCAGCGCAGGCACAGAAGTaGTCAGCTCTGCAGGAGAGTCCCCAGCAGACAATG +
Preference number: 6 (lower is better)
Translates to: ASGVSKPAQAQK*SALQESPQQTM
Trigger: CATTGTCTGCTGGGGACTCTCCTGCAGAGCTGACCACTTCTGTGCCTGCGCTGGTTTGGACACACCTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS CAA 72 bp ATGACCCTGAACAGGACTCATTGTTCTGCCCTGTGCTaGGCACGTCCCCTGAGCCACCAGCCTCTGCTCGAA +
Preference number: 6 (lower is better)
Translates to: MTLNRTHCSALC*ARPLSHQPLLE
Trigger: TTCGAGCAGAGGCTGGTGGCTCAGGGGACGTGCCAAGCACAGGGCAGAACAATGAGTCCTGTTCAGGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 90 bp AGAGGGGACGCGCGGAGAGGCTGGTTTCTGGGCGAGCGGAGAGCTTaGCCCATTAAGCTGCCGGAAGAAGCCAAATCAAAAAGCCAATCT +
Preference number: 6 (lower is better)
Translates to: RGDARRGWFLGERRA*PIKLPEEAKSKSQS
Trigger: AGATTGGCTTTTTGATTTGGCTTCTTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGCCCAGAAACCAGCCTCTCCGCGCGTCCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CAA 90 bp AGGGAAGGGTTCTCCGGGTACCAGATTGGCAGGATGACACCCTCCTaGCAGTCCGATGACCCTGAACAGGACTCATTGTTCTGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: REGFSGYQIGRMTPS*QSDDPEQDSLFCPV
Trigger: CACAGGGCAGAACAATGAGTCCTGTTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCTGCCAATCTGGTACCCGGAGAACCCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS TCA 72 bp GGGTCTCTCCTGGCTTCAGAACCACCGTGCCCTCTGTaGACTCATAGTCAGCCCCTGCATTGGCAGAACCAT +
Preference number: 6 (lower is better)
Translates to: GSLLASEPPCPL*THSQPLHWQNH
Trigger: ATGGTTCTGCCAATGCAGGGGCTGACTATGAGTTCACAGAGGGCACGGTGGTTCTGAAGCCAGGAGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 72 bp GCGCGGAGAGGCTGGTTTCTGGGCGAGCGGAGAGCTTaGCCCATTAAGCTGCCGGAAGAAGCCAAATCAAAA +
Preference number: 6 (lower is better)
Translates to: ARRGWFLGERRA*PIKLPEEAKSK
Trigger: TTTTGATTTGGCTTCTTCCGGCAGCTTAATGGGCAAAGCTCTCCGCTCGCCCAGAAACCAGCCTCTCCGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS GCA 72 bp CCACGCCATACACGAGACTTAGCCACTGGCTTCTATTaGAGCACCAGTTGTCCTCCTGATAGGCCAGAGACC +
Preference number: 6 (lower is better)
Translates to: PRHTRDLATGFY*STSCPPDRPET
Trigger: GGTCTCTGGCCTATCAGGAGGACAACTGGTGCTGCAATAGAAGCCAGTGGCTAAGTCTCGTGTATGGCGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
CDS CCA 72 bp AGTCCTCAGGCTCATCGGTGTGCACCTCGCTCATGCTaGAGGCCTTCTTGGCTTGTTCTGCTGCATGTTTCT +
Preference number: 6 (lower is better)
Translates to: SPQAHRCAPRSC*RPSWLVLLHVS
Trigger: AGAAACATGCAGCAGAACAAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGCACACCGATGAGCCTGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS TCA 72 bp TGTCCTAAAGGGGACGATGACTGTACCCCGGGCACCTaGTGTCCGCAGAACCTTGACCTCCATAACACCAAT +
Preference number: 6 (lower is better)
Translates to: CPKGDDDCTPGT*CPQNLDLHNTN
Trigger: ATTGGTGTTATGGAGGTCAAGGTTCTGCGGACATCAGGTGCCCGGGGTACAGTCATCGTCCCCTTTAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CCA 72 bp ATGTCGTCATCAATTATGCCCACGGAGAACTCCTTCTaGGTCTCTCCTGGCTTCAGAACCACCGTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: MSSSIMPTENSF*VSPGFRTTVPS
Trigger: AGAGGGCACGGTGGTTCTGAAGCCAGGAGAGACCCAGAAGGAGTTCTCCGTGGGCATAATTGATGACGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 72 bp TTCTCCGGGTACCAGATTGGCAGGATGACACCCTCCTaGCAGTCCGATGACCCTGAACAGGACTCATTGTTC +
Preference number: 6 (lower is better)
Translates to: FSGYQIGRMTPS*QSDDPEQDSLF
Trigger: GAACAATGAGTCCTGTTCAGGGTCATCGGACTGCAAGGAGGGTGTCATCCTGCCAATCTGGTACCCGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 90 bp CAGCAGGCTCAGCAAGTGATGGTTCCCTTTCCTTCCCCTCTTTCCTaGACCCCTTCCTTTGACTTATCCACCCTCCTGGCTGCCAGTTAT +
Preference number: 6 (lower is better)
Translates to: QQAQQVMVPFPSPLS*TPSFDLSTLLAASY
Trigger: ATAACTGGCAGCCAGGAGGGTGGATAAGTCAAAGGAAGGGGTCAAGGAAAGAGGGGAAGGAAAGGGAACCATCACTTGCTGAGCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216568.11
ENST00000394330.6
ENST00000533541.1
CDS GCA 72 bp AAGACCTTGGAAATAAAGTCCTCAGGCTCATCGGTGTaGACCTCGCTCATGCTGGAGGCCTTCTTGGCTTGT +
Preference number: 6 (lower is better)
Translates to: KTLEIKSSGSSV*TSLMLEAFLAC
Trigger: ACAAGCCAAGAAGGCCTCCAGCATGAGCGAGGTGCACACCGATGAGCCTGAGGACTTTATTTCCAAGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS GCA 72 bp CTGTTGAATATTGCTGGAGGCATCCCCTCCTCTGGCTaGTCCTCCTCTATGCGGACATTGCTCAACCTTACA +
Preference number: 6 (lower is better)
Translates to: LLNIAGGIPSSG*SSSMRTLLNLT
Trigger: TGTAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGATGCCTCCAGCAATATTCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS TCA 72 bp AGTGGTCAGCTCTGCAGGAGAGTCCCCAGCAGACAATaGGAAATGACCAATCACACTGAGAAGGCCTGTAGA +
Preference number: 6 (lower is better)
Translates to: SGQLCRRVPSRQ*EMTNHTEKACR
Trigger: TCTACAGGCCTTCTCAGTGTGATTGGTCATTTCTCATTGTCTGCTGGGGACTCTCCTGCAGAGCTGACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS GCA 72 bp TCCCCTCCTCTGGCTGCTCCTCCTCTATGCGGACATTaGTCAACCTTACAAAGAAGTGTTCATCCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: SPPLAAPPLCGH*STLQRSVHPPQ
Trigger: TTGAGGAGGATGAACACTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CCA 72 bp CCATTCAGGAAGAGCACAAAGGTAACCAGCCCAAAATaGAGGAAGGCAGAGGTGAGAGGCTGCAACCTTAAC +
Preference number: 6 (lower is better)
Translates to: PFRKSTKVTSPK*RKAEVRGCNLN
Trigger: GTTAAGGTTGCAGCCTCTCACCTCTGCCTTCCTCCATTTTGGGCTGGTTACCTTTGTGCTCTTCCTGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 72 bp ATCCCCTCCTCTGGCTGCTCCTCCTCTATGCGGACATaGCTCAACCTTACAAAGAAGTGTTCATCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: IPSSGCSSSMRT*LNLTKKCSSSS
Trigger: TGAGGAGGATGAACACTTCTTTGTAAGGTTGAGCAATGTCCGCATAGAGGAGGAGCAGCCAGAGGAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 90 bp TATGATCACCCCTTTTTGACAAACAGGTGGATTTCACTGCTTCATTaGCTAGGAGGCTCCCAGCAGCATATCTCTCCTCCTCGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: YDHPFLTNRWISLLH*LGGSQQHISPPRRA
Trigger: TGCCCTTCGAGGAGGAGAGATATGCTGCTGGGAGCCTCCTAGCAAATGAAGCAGTGAAATCCACCTGTTTGTCAAAAAGGGGTGATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS CAA 90 bp AATGAGATGGAGTCCAGGGGTCATTTGAACCAGGTAAAATCCTCTTaGCAAATTCAAGCACCTCTCACTCTCACCTGGGACAGAGGTGCC +
Preference number: 6 (lower is better)
Translates to: NEMESRGHLNQVKSS*QIQAPLTLTWDRGA
Trigger: GGCACCTCTGTCCCAGGTGAGAGTGAGAGGTGCTTGAATTTGCAAAGAGGATTTTACCTGGTTCAAATGACCCCTGGACTCCATCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533541.1
CDS CAA 72 bp TCTAAGTCCTTCTCTGGGTGTTTTTGCTTCAGATCCTaGAGAATCCGGATCATCTCTCTGCGGGACTCATCC +
Preference number: 6 (lower is better)
Translates to: SKSFSGCFCFRS*RIRIISLRDSS
Trigger: GGATGAGTCCCGCAGAGAGATGATCCGGATTCTCAAGGATCTGAAGCAAAAACACCCAGAGAAGGACTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS GCA 72 bp TCTTGGCTTGTTCTGCTGCATGTTTCTTCAGGATATTaGCTGCACCAGTCATCATACGAGTGGCTTGGATAC +
Preference number: 6 (lower is better)
Translates to: SWLVLLHVSSGY*LHQSSYEWLGY
Trigger: GTATCCAAGCCACTCGTATGATGACTGGTGCAGGCAATATCCTGAAGAAACATGCAGCAGAACAAGCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 72 bp CTGAGAAGGCCTGTAGAGAATCCTTTGGGAATGTTGTaGCTGAATCTCTTAGCTCTGTCCTCGTGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: LRRPVENPLGML*LNLLALSSCGK
Trigger: CTTTCCACACGAGGACAGAGCTAAGAGATTCAGCAACAACATTCCCAAAGGATTCTCTACAGGCCTTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS CAA 72 bp ACACTGAGAAGGCCTGTAGAGAATCCTTTGGGAATGTaGTTGCTGAATCTCTTAGCTCTGTCCTCGTGTGGA +
Preference number: 6 (lower is better)
Translates to: TLRRPVENPLGM*LLNLLALSSCG
Trigger: TCCACACGAGGACAGAGCTAAGAGATTCAGCAACAACATTCCCAAAGGATTCTCTACAGGCCTTCTCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS TCA 72 bp ATGGTAGAAGGTCCCAGATCACCAGCAATGAACCCATaGCCACACACCTCAATTAAAGAGAGGAGTATCTCA +
Preference number: 6 (lower is better)
Translates to: MVEGPRSPAMNP*PHTSIKERSIS
Trigger: TGAGATACTCCTCTCTTTAATTGAGGTGTGTGGTCATGGGTTCATTGCTGGTGATCTGGGACCTTCTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CCA 72 bp TTCATCATTTTCCCATCCATCTCAATGCCCTTAGGGTaGTCACCCTCTGTCTCTATGATAATTCCTCGGTGT +
Preference number: 6 (lower is better)
Translates to: FIIFPSISMPLG*SPSVSMIIPRC
Trigger: ACACCGAGGAATTATCATAGAGACAGAGGGTGACCACCCTAAGGGCATTGAGATGGATGGGAAAATGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 72 bp TTCTTGGCTTGTTCTGCTGCATGTTTCTTCAGGATATaGCCTGCACCAGTCATCATACGAGTGGCTTGGATA +
Preference number: 6 (lower is better)
Translates to: FLACSAACFFRI*PAPVIIRVAWI
Trigger: TATCCAAGCCACTCGTATGATGACTGGTGCAGGCAATATCCTGAAGAAACATGCAGCAGAACAAGCCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356921.7
ENST00000357887.7
ENST00000381269.6
ENST00000494208.5
ENST00000528359.5
ENST00000534137.5
CDS CAA 90 bp CCAATCACACTGAGAAGGCCTGTAGAGAATCCTTTGGGAATGTTGTaGCTGAATCTCTTAGCTCTGTCCTCGTGTGGAAAGTTTTATGCT +
Preference number: 6 (lower is better)
Translates to: PITLRRPVENPLGML*LNLLALSSCGKFYA
Trigger: AGCATAAAACTTTCCACACGAGGACAGAGCTAAGAGATTCAGCAACAACATTCCCAAAGGATTCTCTACAGGCCTTCTCAGTGTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS GCA 72 bp TCTCTTAGCTCTGTCCTCGTGTGGAAAGTTTTATGCTaGTCTTTGTCACATGAATATGAACTAATTGCAGTA +
Preference number: 6 (lower is better)
Translates to: SLSSVLVWKVLC*SLSHEYELIAV
Trigger: TACTGCAATTAGTTCATATTCATGTGACAAAGAGCAGCATAAAACTTTCCACACGAGGACAGAGCTAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS TCA 72 bp TGCTCTTTGTCACATGAATATGAACTAATTGCAGTATaGTCACCCCTTTTTGACAAACAGGTGGATTTCACT +
Preference number: 6 (lower is better)
Translates to: CSLSHEYELIAV*SPLFDKQVDFT
Trigger: AGTGAAATCCACCTGTTTGTCAAAAAGGGGTGATCATACTGCAATTAGTTCATATTCATGTGACAAAGAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533899.1
CDS TCA 72 bp GCTGTCATTACTAATGTCATTATTCATCTCTTTGATTaGCTTTTGTGCACTTTAAGGGCAGAGGCTCTGTTA +
Preference number: 6 (lower is better)
Translates to: AVITNVIIHLFD*LLCTLRAEALL
Trigger: TAACAGAGCCTCTGCCCTTAAAGTGCACAAAAGTCAATCAAAGAGATGAATAATGACATTAGTAATGACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533541.1