RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC8A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000183023

Ensembl transcript IDs: ENST00000332839.8, ENST00000402441.5, ENST00000403092.5, ENST00000405269.5, ENST00000405901.7, ENST00000406391.2, ENST00000406785.6, ENST00000407929.6, ENST00000408028.6, ENST00000417271.1, ENST00000448531.1, ENST00000455476.5

Found 876 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGAACGGCAGAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTaGTGGGACTGGGTGGGCCTCCTACTCCTCTGCTCCCAGCACACC +
Preference number: 1 (lower is better)
Translates to: TNGRGPMWSKMSRYV*WDWVGLLLLCSQHT
Trigger: GGTGTGCTGGGAGCAGAGGAGTAGGAGGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTCTGCCGTTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp AACGGCAGAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTaGGACTGGGTGGGCCTCCTACTCCTCTGCTCCCAGCACACCAAA +
Preference number: 1 (lower is better)
Translates to: NGRGPMWSKMSRYVW*DWVGLLLLCSQHTK
Trigger: TTTGGTGTGCTGGGAGCAGAGGAGTAGGAGGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTCTGCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp AGAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTaGGTGGGCCTCCTACTCCTCTGCTCCCAGCACACCAAAACACGT +
Preference number: 1 (lower is better)
Translates to: RGPMWSKMSRYVWWD*VGLLLLCSQHTKTR
Trigger: ACGTGTTTTGGTGTGCTGGGAGCAGAGGAGTAGGAGGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp GGAACAGGGTTGGGATGGGGCACCTGGGGGCTTAGCTGGGCTGAATaGTGGAAGAAGGACCTTGCCAATCACAGTCCAGAGCTAAAGAGA +
Preference number: 1 (lower is better)
Translates to: GTGLGWGTWGLSWAE*WKKDLANHSPELKR
Trigger: TCTCTTTAGCTCTGGACTGTGATTGGCAAGGTCCTTCTTCCAGCATTCAGCCCAGCTAAGCCCCCAGGTGCCCCATCCCAACCCTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp AGAAGAAAATGTACAAGAGCCATAGGAGCACAAAGAGGCAGGATGTaGGGAGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTT +
Preference number: 1 (lower is better)
Translates to: RRKCTRAIGAQRGRM*GAWQSGAHPAHLRF
Trigger: AAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTCCTCACATCCTGCCTCTTTGTGCTCCTATGGCTCTTGTACATTTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR TCA 90 bp GGCATTGTACTAAATTCAGAAACCGTATCCGACAAGGGGCTGAGCTaGGGTTGTGGTATGGCCCCAGTCCTAGGATTGGTCCCACCTACT +
Preference number: 1 (lower is better)
Translates to: GIVLNSETVSDKGLS*GCGMAPVLGLVPPT
Trigger: AGTAGGTGGGACCAATCCTAGGACTGGGGCCATACCACAACCTCAGCTCAGCCCCTTGTCGGATACGGTTTCTGAATTTAGTACAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp GCAGCTGAAGTTTACAGAGATCACCTACTTTTACATGTGTGTCTCTaGGCTGTATGCTGTAGCAAGAGAGGGGACAGAGGAGATCCAGTG +
Preference number: 1 (lower is better)
Translates to: AAEVYRDHLLLHVCL*AVCCSKRGDRGDPV
Trigger: CACTGGATCTCCTCTGTCCCCTCTCTTGCTACAGCATACAGCCCAGAGACACACATGTAAAAGTAGGTGATCTCTGTAAACTTCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp CTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAAGAGAGCTCTaGGAAATCTCAGGTACCAACTGTTTGAAAGGGCTAGTTTGCCTG +
Preference number: 1 (lower is better)
Translates to: LPLLQSHSLLLIREL*EISGTNCLKGLVCL
Trigger: CAGGCAAACTAGCCCTTTCAAACAGTTGGTACCTGAGATTTCTCAGAGCTCTCTTATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp GTTTACAGAGATCACCTACTTTTACATGTGTGTCTCTGGGCTGTATaGTGTAGCAAGAGAGGGGACAGAGGAGATCCAGTGCTGAAACAA +
Preference number: 1 (lower is better)
Translates to: VYRDHLLLHVCLWAV*CSKRGDRGDPVLKQ
Trigger: TTGTTTCAGCACTGGATCTCCTCTGTCCCCTCTCTTGCTACAGCATACAGCCCAGAGACACACATGTAAAAGTAGGTGATCTCTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp ACCAACCTGGAAAGAGCTCCTAGAAGAGTCACTGGTAGAACCAACTaGTCACAGCTTCTTTGGGTGCTAGACTCATTTAACAACCAGTTG +
Preference number: 1 (lower is better)
Translates to: TNLERAPRRVTGRTN*SQLLWVLDSFNNQL
Trigger: CAACTGGTTGTTAAATGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCTAGGAGCTCTTTCCAGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp GGGAAAAAGTCAAAGAAAGTGAAATACGTACCATTTCTTGTGGGCTaGAAACCTGCAGTGCTTTCCTTTGGGAGTTCCACCTCTCAGTGG +
Preference number: 1 (lower is better)
Translates to: GKKSKKVKYVPFLVG*KPAVLSFGSSTSQW
Trigger: CCACTGAGAGGTGGAACTCCCAAAGGAAAGCACTGCAGGTTTCCAGCCCACAAGAAATGGTACGTATTTCACTTTCTTTGACTTTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp GAAAGCCAGTGTATTAGAAGCCTTCTAACTACTGATAGATCAGTCTaGGCCTTGTGGTTCATTTGGGCCAGACTCAAGCTCAGTATCCCA +
Preference number: 1 (lower is better)
Translates to: ESQCIRSLLTTDRSV*ALWFIWARLKLSIP
Trigger: TGGGATACTGAGCTTGAGTCTGGCCCAAATGAACCACAAGGCCCAGACTGATCTATCAGTAGTTAGAAGGCTTCTAATACACTGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp TTCATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATaGGCAGCAGCTGGCTCACAACTTAAAGTACCTTCAACCCATACA +
Preference number: 1 (lower is better)
Translates to: FMWLHGLDKCIGDPI*AAAGSQLKVPSTHT
Trigger: TGTATGGGTTGAAGGTACTTTAAGTTGTGAGCCAGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp AAAGGCCCGTTGGTCACCCTGGCTTCTTTCTTACTCAGCAACTACTaGTATAATCAAAGAGGACTAGACTGGACAGTGAAAGAAACAGGG +
Preference number: 1 (lower is better)
Translates to: KGPLVTLASFLLSNY*YNQRGLDWTVKETG
Trigger: CCCTGTTTCTTTCACTGTCCAGTCTAGTCCTCTTTGATTATATCAGTAGTTGCTGAGTAAGAAAGAAGCCAGGGTGACCAACGGGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp GGTGTAATACCATCGGGACCGCCCAGCATTTTGAAATGTACTGCGTaGTGGGAAGACAACAAGATGGTTAGAAGTGGTGAGTACATAATG +
Preference number: 1 (lower is better)
Translates to: GVIPSGPPSILKCTA*WEDNKMVRSGEYIM
Trigger: CATTATGTACTCACCACTTCTAACCATCTTGTTGTCTTCCCATCACGCAGTACATTTCAAAATGCTGGGCGGTCCCGATGGTATTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp CCGTCCCCCAGTGCATTCTTGGATTTAACTAGGCGTATCTGTCTTTaGAGTCAACAAATTAGGAGGGCTGGGCTATATCTTAACTGTCAA +
Preference number: 1 (lower is better)
Translates to: PSPSAFLDLTRRICL*SQQIRRAGLYLNCQ
Trigger: TTGACAGTTAAGATATAGCCCAGCCCTCCTAATTTGTTGACTGCAAAGACAGATACGCCTAGTTAAATCCAAGAATGCACTGGGGGACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp TTCTGTGCACGTACACAGTATGTACAATATGCTAGTTCCTTTCTTTaGCCTTGTCCAGGAAGTTACCAATGTCTCCTCGGTGTGAGCTTC +
Preference number: 1 (lower is better)
Translates to: FCARTQYVQYASSFL*PCPGSYQCLLGVSF
Trigger: GAAGCTCACACCGAGGAGACATTGGTAACTTCCTGGACAAGGGCAAAGAAAGGAACTAGCATATTGTACATACTGTGTACGTGCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp ATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGCTGGTCAGTGGCTaGTTGTCATCATATTCGTCTGTTATTGTGAAGCCACCTTTCATT +
Preference number: 1 (lower is better)
Translates to: ISAMRLSSSSLLVSG*LSSYSSVIVKPPFI
Trigger: AATGAAAGGTGGCTTCACAATAACAGACGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGGAGAGGCGCATTGCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR CCA 90 bp ATACGTACCATTTCTTGTGGGCTGGAAACCTGCAGTGCTTTCCTTTaGGAGTTCCACCTCTCAGTGGTTGCTCCTTTTATAGATAAGACA +
Preference number: 1 (lower is better)
Translates to: IRTISCGLETCSAFL*EFHLSVVAPFIDKT
Trigger: TGTCTTATCTATAAAAGGAGCAACCACTGAGAGGTGGAACTCCCAAAGGAAAGCACTGCAGGTTTCCAGCCCACAAGAAATGGTACGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp ATGCACTGTGTAACAGGTATCACAACAACATTTCCGAACGGCACATaGAGAAGGAGCAAATGTTCAGTCATGACTGGAACAGGATTGTGC +
Preference number: 1 (lower is better)
Translates to: MHCVTGITTTFPNGT*RRSKCSVMTGTGLC
Trigger: GCACAATCCTGTTCCAGTCATGACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCTGTTACACAGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp GAAGGAGTGACTGTGATTTCGTTAGAGCTATTTGGTAATCAGGTGTaGGTGAGAGGAATGGGACAATGGGGAAAAGAGCCGATGAGAAAA +
Preference number: 1 (lower is better)
Translates to: EGVTVISLELFGNQV*VRGMGQWGKEPMRK
Trigger: TTTTCTCATCGGCTCTTTTCCCCATTGTCCCATTCCTCTCACTCACACCTGATTACCAAATAGCTCTAACGAAATCACAGTCACTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp TTCTCTGCATTTTTGCCTCCCTTCTACCTGCCCCCTGTCAGTCTTTaGAGGTCATTTGTGATGGGTCCTTCAAACTGTGAATACAGAATA +
Preference number: 1 (lower is better)
Translates to: FSAFLPPFYLPPVSL*RSFVMGPSNCEYRI
Trigger: TATTCTGTATTCACAGTTTGAAGGACCCATCACAAATGACCTTCAAAGACTGACAGGGGGCAGGTAGAAGGGAGGCAAAAATGCAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp TGTATTAGAAGCCTTCTAACTACTGATAGATCAGTCTGGGCCTTGTaGTTCATTTGGGCCAGACTCAAGCTCAGTATCCCATCTAATGCA +
Preference number: 1 (lower is better)
Translates to: CIRSLLTTDRSVWAL*FIWARLKLSIPSNA
Trigger: TGCATTAGATGGGATACTGAGCTTGAGTCTGGCCCAAATGAACCACAAGGCCCAGACTGATCTATCAGTAGTTAGAAGGCTTCTAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp ATCTATTCACAGGTTCTCTTCCTTAAACAAGCACCTGCCACTGATTaGCAGCTCTACCAAGATTGCTTAAGGCAGACATCCGCTGAAAAT +
Preference number: 1 (lower is better)
Translates to: IYSQVLFLKQAPATD*QLYQDCLRQTSAEN
Trigger: ATTTTCAGCGGATGTCTGCCTTAAGCAATCTTGGTAGAGCTGTCAATCAGTGGCAGGTGCTTGTTTAAGGAAGAGAACCTGTGAATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp ACTTCTAGAGTTGGAGTGTCAGAATATTCTCTTGGAAGAAAAGGATaGAAGTGTAGACACCTCATCACTAGGTCCAATCCACCTCACAGT +
Preference number: 1 (lower is better)
Translates to: TSRVGVSEYSLGRKG*KCRHLITRSNPPHS
Trigger: ACTGTGAGGTGGATTGGACCTAGTGATGAGGTGTCTACACTTGCATCCTTTTCTTCCAAGAGAATATTCTGACACTCCAACTCTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp AGCCTTCTAACTACTGATAGATCAGTCTGGGCCTTGTGGTTCATTTaGGCCAGACTCAAGCTCAGTATCCCATCTAATGCATCAAATATT +
Preference number: 1 (lower is better)
Translates to: SLLTTDRSVWALWFI*ARLKLSIPSNASNI
Trigger: AATATTTGATGCATTAGATGGGATACTGAGCTTGAGTCTGGCCCAAATGAACCACAAGGCCCAGACTGATCTATCAGTAGTTAGAAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp AGTACATTTGGACATCTTGACAGGCAGGGAAAAAGTCAAAGAAAGTaGAATACGTACCATTTCTTGTGGGCTGGAAACCTGCAGTGCTTT +
Preference number: 1 (lower is better)
Translates to: STFGHLDRQGKSQRK*NTYHFLWAGNLQCF
Trigger: AAAGCACTGCAGGTTTCCAGCCCACAAGAAATGGTACGTATTTCACTTTCTTTGACTTTTTCCCTGCCTGTCAAGATGTCCAAATGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp GGTACCAACTGTTTGAAAGGGCTAGTTTGCCTGTTAGCAGGATCTTaGAGGGAAAATGCTAGGGACAAGATGATCAGTGTATATGAAAAT +
Preference number: 1 (lower is better)
Translates to: GTNCLKGLVCLLAGS*RENARDKMISVYEN
Trigger: ATTTTCATATACACTGATCATCTTGTCCCTAGCATTTTCCCTCCAAGATCCTGCTAACAGGCAAACTAGCCCTTTCAAACAGTTGGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp GCTCCTAGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTaGGTGCTAGACTCATTTAACAACCAGTTGTTGGAAAAATTTTCA +
Preference number: 1 (lower is better)
Translates to: APRRVTGRTNCSQLL*VLDSFNNQLLEKFS
Trigger: TGAAAATTTTTCCAACAACTGGTTGTTAAATGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCTAGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp TGTCTCCTCGGTGTGAGCTTCCTACTGTCTGTAAAAATTAATAGATaGAACCCAGGCAAGTCCTGTTGTAATAACAGTTGTGCCAACAAT +
Preference number: 1 (lower is better)
Translates to: CLLGVSFLLSVKINR*NPGKSCCNNSCANN
Trigger: ATTGTTGGCACAACTGTTATTACAACAGGACTTGCCTGGGTTCCATCTATTAATTTTTACAGACAGTAGGAAGCTCACACCGAGGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp AATAAAATGAACAAACCAGCACTATCTACCATCTGTGCCAGACAGTaGAGATGTGAAATAAATACTTTGCAGGGAGGGGTGTTGTGGAAA +
Preference number: 1 (lower is better)
Translates to: NKMNKPALSTICARQ*RCEINTLQGGVLWK
Trigger: TTTCCACAACACCCCTCCCTGCAAAGTATTTATTTCACATCTGCACTGTCTGGCACAGATGGTAGATAGTGCTGGTTTGTTCATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp TGGGATACACTGGGCTTTCTCAGTGATCTGGATCACCAACATGATTaGCCTTCTTGGTTTAAAATGGAGAGATATATTTATCTGCAAGTC +
Preference number: 1 (lower is better)
Translates to: WDTLGFLSDLDHQHD*PSWFKMERYIYLQV
Trigger: GACTTGCAGATAAATATATCTCTCCATTTTAAACCAAGAAGGGCAATCATGTTGGTGATCCAGATCACTGAGAAAGCCCAGTGTATCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp TTTATATTTCTATCAAACTTCATGTGGTTACATGGGCTTGACAAGTaGATTGGTGACCCAATATGGGCAGCAGCTGGCTCACAACTTAAA +
Preference number: 1 (lower is better)
Translates to: FIFLSNFMWLHGLDK*IGDPIWAAAGSQLK
Trigger: TTTAAGTTGTGAGCCAGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACATGAAGTTTGATAGAAATATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp CTGGGCTTTCTCAGTGATCTGGATCACCAACATGATTGCCCTTCTTaGTTTAAAATGGAGAGATATATTTATCTGCAAGTCGGTCAAAGA +
Preference number: 1 (lower is better)
Translates to: LGFLSDLDHQHDCPS*FKMERYIYLQVGQR
Trigger: TCTTTGACCGACTTGCAGATAAATATATCTCTCCATTTTAAACCAAGAAGGGCAATCATGTTGGTGATCCAGATCACTGAGAAAGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp CCAACAAAGATAAAAGATGGGATACACTGGGCTTTCTCAGTGATCTaGATCACCAACATGATTGCCCTTCTTGGTTTAAAATGGAGAGAT +
Preference number: 1 (lower is better)
Translates to: PTKIKDGIHWAFSVI*ITNMIALLGLKWRD
Trigger: ATCTCTCCATTTTAAACCAAGAAGGGCAATCATGTTGGTGATCCAGATCACTGAGAAAGCCCAGTGTATCCCATCTTTTATCTTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp CATAGAAAAGTTCCATTGCCAACAAAGATAAAAGATGGGATACACTaGGCTTTCTCAGTGATCTGGATCACCAACATGATTGCCCTTCTT +
Preference number: 1 (lower is better)
Translates to: HRKVPLPTKIKDGIH*AFSVIWITNMIALL
Trigger: AAGAAGGGCAATCATGTTGGTGATCCAGATCACTGAGAAAGCCCAGTGTATCCCATCTTTTATCTTTGTTGGCAATGGAACTTTTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp TCAGTTATTCTAATTCCTGAAAAAGAGCTACCATTCCAAAATATCTaGCAAGTTTGGTTTCTCCTAAGGGAGGCCTGGAGTGACAGTTAC +
Preference number: 1 (lower is better)
Translates to: SVILIPEKELPFQNI*QVWFLLREAWSDSY
Trigger: GTAACTGTCACTCCAGGCCTCCCTTAGGAGAAACCAAACTTGTCAGATATTTTGGAATGGTAGCTCTTTTTCAGGAATTAGAATAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp GTACCCACAGAGAAGCATTTGACCCACTCATATTTCTTAGAGGCATaGAAGCTATCTGTTACGTTTTTCTATGTTTACATACTCCACCTT +
Preference number: 1 (lower is better)
Translates to: VPTEKHLTHSYFLEA*KLSVTFFYVYILHL
Trigger: AAGGTGGAGTATGTAAACATAGAAAAACGTAACAGATAGCTTCCATGCCTCTAAGAAATATGAGTGGGTCAAATGCTTCTCTGTGGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp AGACCCTATATCAAACTTACACAGGTCTTGGCTCATGGTAATCTCTaGATGTGTGTGTTGGGTCTGAATCCATTTATCTTATTAGTGGAA +
Preference number: 1 (lower is better)
Translates to: RPYIKLTQVLAHGNL*MCVLGLNPFILLVE
Trigger: TTCCACTAATAAGATAAATGGATTCAGACCCAACACACACATCCAGAGATTACCATGAGCCAAGACCTGTGTAAGTTTGATATAGGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp GATCCAATATTACATGCTGTCAATCATAAAATGGCCAAACGTTCTTaGGATTATGAAACTACACTCAGAACTTGCTCTGCATGCAACTGC +
Preference number: 1 (lower is better)
Translates to: DPILHAVNHKMAKRS*DYETTLRTCSACNC
Trigger: GCAGTTGCATGCAGAGCAAGTTCTGAGTGTAGTTTCATAATCTCAAGAACGTTTGGCCATTTTATGATTGACAGCATGTAATATTGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp CTAAGAGAAAATTTTAATTTAGGCTTGTTTCAAGATTTCAAGGCTTaGGCCAATACAGAAACCATGGACTGTAGACAAAGGCAAGTCCCC +
Preference number: 1 (lower is better)
Translates to: LRENFNLGLFQDFKA*ANTETMDCRQRQVP
Trigger: GGGGACTTGCCTTTGTCTACAGTCCATGGTTTCTGTATTGGCTCAAGCCTTGAAATCTTGAAACAAGCCTAAATTAAAATTTTCTCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp ACAATTATTATTATGGCTTATTGGAAGAGTGTTGAATTGTACCACTaGCCTACGAAAACCACCACAAAGGACACTGAAAGGCAAAGCTGT +
Preference number: 1 (lower is better)
Translates to: TIIIMAYWKSVELYH*PTKTTTKDTERQSC
Trigger: ACAGCTTTGCCTTTCAGTGTCCTTTGTGGTGGTTTTCGTAGGTCAGTGGTACAATTCAACACTCTTCCAATAAGCCATAATAATAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 90 bp ATGCCACCCTTTTCTTTATGGATTGACTATTGTGCTTGCTCGGTATaGGTTCAGTTTACTATCAAAATTGTCCACCAAGTTATTCAGTGG +
Preference number: 1 (lower is better)
Translates to: MPPFSLWIDYCACSV*VQFTIKIVHQVIQW
Trigger: CCACTGAATAACTTGGTGGACAATTTTGATAGTAAACTGAACTCATACCGAGCAAGCACAATAGTCAATCCATAAAGAAAAGGGTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp TGTAGGTCAGGTGAGATCCAATATTACATGCTGTCAATCATAAAATaGCCAAACGTTCTTGAGATTATGAAACTACACTCAGAACTTGCT +
Preference number: 1 (lower is better)
Translates to: CRSGEIQYYMLSIIK*PNVLEIMKLHSELA
Trigger: AGCAAGTTCTGAGTGTAGTTTCATAATCTCAAGAACGTTTGGCCATTTTATGATTGACAGCATGTAATATTGGATCTCACCTGACCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 90 bp GATACCTGTACAGGTCCAATGTATTCTACAAATAACTCAATAATTTaGAAACGTGTGCCAAAAACATGCTTTTCTTTGGTTGCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: DTCTGPMYSTNNSII*KRVPKTCFSLVAKA
Trigger: GGCTTTGGCAACCAAAGAAAAGCATGTTTTTGGCACACGTTTCCAAATTATTGAGTTATTTGTAGAATACATTGGACCTGTACAGGTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 90 bp GTCAGTAATTTTTGCTTACCTTTCCCCCTGACAAATTTAGCTTTGTaGCTCAGTGGTAATAAAGTTGGAATATATTACTGCTATGAAGCT +
Preference number: 1 (lower is better)
Translates to: VSNFCLPFPLTNLAL*LSGNKVGIYYCYEA
Trigger: AGCTTCATAGCAGTAATATATTCCAACTTTATTACCACTGAGGCACAAAGCTAAATTTGTCAGGGGGAAAGGTAAGCAAAAATTACTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp GCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGATACAGCGGTAGATGGCAGCGATaGACCAGGCCACACCGATTC +
Preference number: 2 (lower is better)
Translates to: AVRGPPSSPPISGLRRYSGRWQR*TRPHRF
Trigger: GAATCGGTGTGGCCTGGTCCATCGCTGCCATCTACC...GCTGTATCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR TCA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGATGCCAGGGGACACTTTaGACTGTTCCCCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRCQGTL*TVPHWL
Trigger: CAGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCA...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CCA 90 bp GCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGATACAGCCATACTGGTCCTGGGTaGCTGCCACTTTGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: AVRGPPSSPPISGLRRYSHTGPG*LPLCWQ
Trigger: TTGCCAGCAAAGTGGCAGCCACCCAGGACCAGTATG...GCTGTATCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CCA 90 bp GAGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGCCTCTTCCTCTTTGCTaGTCAGTGGCTGCTTGTCAT +
Preference number: 2 (lower is better)
Translates to: ELGSPGPTQLTSDFWPPPPLPLC*SVAACH
Trigger: ATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGG...CGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR CAA 90 bp ATGTACAAGAGCCATAGGAGCACAAAGAGGCAGGATGTGAGGAGCTaGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: MYKSHRSTKRQDVRS*AVRGPPSSPPISGL
Trigger: GAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTCCTCACATCCTGCCTCTTTGTGCTCCTATGGCTCTTGTACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR GCA 90 bp GCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGATACAGCTTGCTGGTCAGTGGCTaGTTGTCATCATATTCGTCT +
Preference number: 2 (lower is better)
Translates to: AVRGPPSSPPISGLRRYSLLVSG*LSSYSS
Trigger: AGACGAATATGATGACAAGCAGCCACTGACCAGCAA...GCTGTATCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGCCTTGTGGTTCATTTaGGCCAGACTCAAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAALWFI*ARLKLS
Trigger: ACTGAGCTTGAGTCTGGCCCAAATGAACCACAAGGC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGACCCCTGTGGAAAATaGAATGTGAGTGGTGAGCTT +
Preference number: 2 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWADPCGK*NVSGEL
Trigger: AAGCTCACCACTCACATTGCATTTTCCACAGGGGTC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGTGTGCTCTCCCAGGATaGGGCGCCCCATTTCTGCAA +
Preference number: 2 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMCALPG*GAPFLQ
Trigger: TTGCAGAAATGGGGCGCCCCATCCTGGGAGAGCACA...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGCTTTCTCAGTGATCTaGATCACCAACATGATTGCC +
Preference number: 2 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAAFSVI*ITNMIA
Trigger: GGCAATCATGTTGGTGATCCAGATCACTGAGAAAGC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCTGGGATCGACTGATTTaGTGTAATACTCTGCATGCT +
Preference number: 2 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAWDRLI*CNTLHA
Trigger: AGCATGCAGAGTATTACATCAAATCAGTCGATCCCA...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCTCCATTCCACTTTTATaGTTCTTCTTGGAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWASIPLL*FFLEAA
Trigger: AGCTGCCTCCAAGAAGAAGCATAAAAGTGGAATGGA...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp AGGCCTCCAGGGAGGAGAAGAAAATGTACAAGAGCCATAGGAGCACAAAGAGGCCTGGTCCTGGGTGGCTaGCACTTTGCTGGCAAATGT +
Preference number: 2 (lower is better)
Translates to: RPPGRRRKCTRAIGAQRGLVLGG*HFAGKC
Trigger: ACATTTGCCAGCAAAGTGGCAGCCACCCAGGACCAG...GCCTCTTTGTGCTCCTATGGCTCTTGTACATTTTCTTCTCCTCCCTGGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CCA 90 bp TTCCAAGTGCGACGAACACGACTGCAGTCACAGAATCTTTCAGGCCAATGGTGCACTGAGCTGCAAAGATaGCCCTGCCTCCATGCCTTG +
Preference number: 2 (lower is better)
Translates to: FQVRRTRLQSQNLSGQWCTELQR*PCLHAL
Trigger: CAAGGCATGGAGGCAGGGCCATCTTTGCAGCTCAGT...GCACCATTGGCCTGAAAGATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGGGCAGGATTCTTCTTaGCGAATAAGCAATCTTAGT +
Preference number: 2 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAGQDSS*RISNLS
Trigger: ACTAAGATTGCTTATTCGCCAAGAAGAATCCTGCCC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp TGTACTAAATTCAGAAACCGTATCCGACAAGGGGCTGAGCTGAGGTaGTGGTATGGCCCCAGTCCTAGGATTGGTCCCACCTACTTTGCC +
Preference number: 2 (lower is better)
Translates to: CTKFRNRIRQGAELR*WYGPSPRIGPTYFA
Trigger: GGCAAAGTAGGTGGGACCAATCCTAGGACTGGGGCCATACCACAACCTCAGCTCAGCCCCTTGTCGGATACGGTTTCTGAATTTAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp AGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTaGCTGGTCAGTGGCTGCTTGTCATCATATTCGTCTGTTATTGTG +
Preference number: 2 (lower is better)
Translates to: RMGRPISAMRLSSSS*LVSGCLSSYSSVIV
Trigger: CACAATAACAGACGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR GCA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACAACTTCCAACTTGGTGTaGTCTCCCAGGATGGGGCGC +
Preference number: 2 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTTSNLV*SPRMGR
Trigger: GCGCCCCATCCTGGGAGAGCACACCAAGTTGGAAGT...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR TCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGTACAGAGTATGCTCTTaGAGCTGGATTCCATCAGCA +
Preference number: 2 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMYRVCS*SWIPSA
Trigger: TGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTA...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
3UTR-3UTR GCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGATGATGATACCAGTTaGACAATAATACCATTTTGG +
Preference number: 2 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWADDDTS*TIIPFW
Trigger: CCAAAATGGTATTATTGTGCAACTGGTATCATCATC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTTGCAGTGCTTTCCTTTaGGAGTTCCACCTCTCAGTG +
Preference number: 2 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAACSAFL*EFHLSV
Trigger: CACTGAGAGGTGGAACTCCCAAAGGAAAGCACTGCA...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTGCAGCCCTTCTAGACTaGGCTGCAAAGATGGCCCTG +
Preference number: 2 (lower is better)
Translates to: RYHNNISERHMKKEQMFSAALLD*AAKMAL
Trigger: CAGGGCCATCTTTGCAGCTCAGTCTAGAAGGGCTGC...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTGGAAAGGGTGGCTCTaGAAGCCTAGGCACATCCAA +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGWKGWL*KPRHIQ
Trigger: TTGGATGTGCCTAGGCTTTCAGAGCCACCCTTTCCA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTGACAAGGGGCTGAGCTaGGGTTGTGGTATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLDKGLS*GCGMAP
Trigger: TGGGGCCATACCACAACCTCAGCTCAGCCCCTTGTC...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTTAGCTGGGCTGAATaGTGGAAGAAGGACCTTGCC +
Preference number: 2 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLSWAE*WKKDLA
Trigger: GGCAAGGTCCTTCTTCCAGCATTCAGCCCAGCTAAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTCACAGGGGAAAGGCATaGATCAGAATTTTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAHRGKA*IRIFAG
Trigger: CCCTGCAAAAATTCTGATGCATGCCTTTCCCCTGTG...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAACAGGCATGGGAACCTaGCTGCTCAGTGCTATGTTT +
Preference number: 2 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSTGMGT*LLSAMF
Trigger: AAACATAGCACTGAGCAGGCAGGTTCCCATGCCTGT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTAGCTGGGCTGAATGCTaGAAGAAGGACCTTGCCAAT +
Preference number: 2 (lower is better)
Translates to: SISRGDNTFKGPLVTLASSWAEC*KKDLAN
Trigger: ATTGGCAAGGTCCTTCTTCCAGCATTCAGCCCAGCT...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTTTGGGATGGGGCACCTaGGGGCTTAGCTGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLLGWGT*GLSWAE
Trigger: TTCAGCCCAGCTAAGCCCCCAGGTGCCCCATCCCAA...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTGTTTGCATAGGGGATaGCAGGTGGACAGGAGGAAC +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGCLHRG*QVDRRN
Trigger: GTTCCTCCTGTCCACCTGCCATCCCCTATGCAAACA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AGGCCTCCAGGGAGGAGAAGAAAATGTACAAGAGCCATAGGAGCACAAAGAGGCCTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTC +
Preference number: 2 (lower is better)
Translates to: RPPGRRRKCTRAIGAQRGLFAGQ*LLVIIF
Trigger: GAATATGATGACAAGCAGCCACTGACCAGCAAAGAG...GCCTCTTTGTGCTCCTATGGCTCTTGTACATTTTCTTCTCCTCCCTGGAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR CAA 90 bp TCTGCAATGCGCCTCTCCTCTTCCTCTTTGCTGGTCAGTGGCTGCTaGTCATCATATTCGTCTGTTATTGTGAAGCCACCTTTCATTCCT +
Preference number: 2 (lower is better)
Translates to: SAMRLSSSSLLVSGC*SSYSSVIVKPPFIP
Trigger: AGGAATGAAAGGTGGCTTCACAATAACAGACGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGGAGAGGCGCATTGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTACAGAGTATGCTCTTaGAGCTGGATTCCATCAGCA +
Preference number: 2 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFYRVCS*SWIPSA
Trigger: TGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
3UTR-3UTR TCA 90 bp ATGTGTCTGGCACTGATGTTCCAAGTGCGACGAACACGACTGCAGTCACAGAATTACAGAGTATGCTCTTaGAGCTGGATTCCATCAGCA +
Preference number: 2 (lower is better)
Translates to: MCLALMFQVRRTRLQSQNYRVCS*SWIPSA
Trigger: TGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTA...ATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAACATCAGTGCCAGACACAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR TCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCACTGTTTATGGGCTTATaGTCCTGGATGCAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSLFMGL*SWMQER
Trigger: CCTTTCCTGCATCCAGGATCATAAGCCCATAAACAG...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATAAGCCAGGTCTCCAATaGAAGCTGTCAGTAGGCCAA +
Preference number: 2 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDKPGLQ*KLSVGQ
Trigger: TTGGCCTACTGACAGCTTTCATTGGAGACCTGGCTT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTTATGTGTGGTGGGACTaGGTGGGCCTCCTACTCCTC +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLYVWWD*VGLLLL
Trigger: GAGGAGTAGGAGGCCCACCCAGTCCCACCACACATA...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGAGGCGTCTGCATACTaGTCCTGGGTGGCTGCCACT +
Preference number: 2 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLEASAY*SWVAAT
Trigger: AGTGGCAGCCACCCAGGACCAGTATGCAGACGCCTC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR GCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCCTTCTAGACTGAGCTaGAAAGATGGCCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLPSRLS*KDGPAS
Trigger: GGAGGCAGGGCCATCTTTGCAGCTCAGTCTAGAAGG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGCATGGGCTTGACAAGTaGATTGGTGACCCAATATGG +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGHGLDK*IGDPIW
Trigger: CCATATTGGGTCACCAATGCACTTGTCAAGCCCATG...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAACTGAGCTGCAAAGATaGCCCTGCCTCCATGCCTTG +
Preference number: 2 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLITELQR*PCLHAL
Trigger: CAAGGCATGGAGGCAGGGCCATCTTTGCAGCTCAGT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTAACCATCGGATTTCCTaGCTCCATTCCACTTTTATG +
Preference number: 2 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAANHRIS*LHSTFM
Trigger: CATAAAAGTGGAATGGAGCCAGGAAATCCGATGGTT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAGAATCAAGACCCCTGTaGAAAATGCAATGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSESRPL*KMQCEW
Trigger: CCACTCACATTGCATTTTCCACAGGGGTCTTGATTC...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGGCTCATGGTAATCTCTaGATGTGTGTGTTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGAHGNL*MCVLGL
Trigger: CAGACCCAACACACACATCCAGAGATTACCATGAGC...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAATCTTTCAGGCCAATaGTGCAGCCAAAGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQNLSGQ*CSQSGK
Trigger: CTTCCCACTTTGGCTGCACCATTGGCCTGAAAGATT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR CAA 90 bp TGTTCAGTCATGACTGGAACAGGATTGTGCAAGCCATGGATGCCTTaGAAAATAAAACTGACAGACAATCCCAAGCAACGGCAACATGGG +
Preference number: 2 (lower is better)
Translates to: CSVMTGTGLCKPWMP*KIKLTDNPKQRQHG
Trigger: CCCATGTTGCCGTTGCTTGGGATTGTCTGTCAGTTTTATTTTCAAAGGCATCCATGGCTTGCACAATCCTGTTCCAGTCATGACTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGGCAAATGTTCAGTCATaGCTGGAACAGGATTGTGCA +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGANVQS*LEQDCA
Trigger: TGCACAATCCTGTTCCAGTCATGACTGAACATTTGC...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTTTCCGAACGGCACATaGAGAAGGAGCAAATGTTCA +
Preference number: 2 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDFPNGT*RRSKCS
Trigger: TGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTAAAACACTCACTGGTTaGAGGATGGAATCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAKTLTG*RMESGN
Trigger: ATTTCCTGATTCCATCCTTCAACCAGTGAGTGTTTT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCATACATTTGGACATCTTaGCAGGCAGGGAAAAAGTCA +
Preference number: 2 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSYIWTS*QAGKKS
Trigger: TGACTTTTTCCCTGCCTGTCAAGATGTCCAAATGTA...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTTTCATAGATCTGGGCTaGAGTCTCAGGTGGGACTGG +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLFIDLG*SLRWDW
Trigger: CCAGTCCCACCTGAGACTTCAGCCCAGATCTATGAA...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTGGCAAAAGTTGGGAATaGGGTCAAGGCTCCTCATTG +
Preference number: 2 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPGKSWE*GQGSSL
Trigger: CAATGAGGAGCCTTGACCTCATTCCCAACTTTTGCC...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGGTTATTCTTACTGTTTaGATAGGGGATGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGVILTV*IGDGRW
Trigger: CCACCTGCCATCCCCTATGCAAACAGTAAGAATAAC...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATAAGGATTTATCAACCTaGAGAGAGTGCAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDKDLST*RECSPS
Trigger: AGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
3UTR-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGATTTTGCACGTTCCTaGGAATCTAGGCACGTTTTC +
Preference number: 2 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDDFARS*ESRHVF
Trigger: GAAAACGTGCCTAGATTCCCAGGAACGTGCAAAATC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTGTTCAACTGCTAGGTaGATGTGGGTCAATCCAAGA +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGCSTAR*MWVNPR
Trigger: TCTTGGATTGACCCACATCCACCTAGCAGTTGAACA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp CAGTGTATTAGAAGCCTTCTAACTACTGATAGATCAGTCTGGGCCTaGTGGTTCATTTGGGCCAGACTCAAGCTCAGTATCCCATCTAAT +
Preference number: 2 (lower is better)
Translates to: QCIRSLLTTDRSVWA*WFIWARLKLSIPSN
Trigger: ATTAGATGGGATACTGAGCTTGAGTCTGGCCCAAATGAACCACAAGGCCCAGACTGATCTATCAGTAGTTAGAAGGCTTCTAATACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAACTGCCTTGGCCAAGTaGAGTGATTACAATGATAAA +
Preference number: 2 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSTALAK*SDYNDK
Trigger: TTTATCATTGTAATCACTTCACTTGGCCAAGGCAGT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCATTAAAAAGAGAACATTaGATGACCGAAGGGTTGACG +
Preference number: 2 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSLKREH*MTEGLT
Trigger: CGTCAACCCTTCGGTCATGCAATGTTCTCTTTTTAA...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTCATTTTGAAATGTACTaGGTGATGGGAAGACAACAA +
Preference number: 2 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAHFEMY*VMGRQQ
Trigger: TTGTTGTCTTCCCATCACGCAGTACATTTCAAAATG...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGTTCCCCATTGGCTaGGTGGTAGATGGCAGCGAT +
Preference number: 2 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTLFPIG*VVDGSD
Trigger: ATCGCTGCCATCTACCACGCAGCCAATGGGGAACAG...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTACAAAACTGAAAATGTaGACAGCCTCTGAGTACATT +
Preference number: 2 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAATKLKM*TASEYI
Trigger: AATGTACTCAGAGGCTGTCCACATTTTCAGTTTTGT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTTCAAACAAAACAGGCTaGTTCACAGCTGAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAASNKTG*FTAERK
Trigger: TTTTCTTTCAGCTGTGAACCAGCCTGTTTTGTTTGA...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp TATTTCTATCAAACTTCATGTGGTTACATGGGCTTGACAAGTGCATaGGTGACCCAATATGGGCAGCAGCTGGCTCACAACTTAAAGTAC +
Preference number: 2 (lower is better)
Translates to: YFYQTSCGYMGLTSA*VTQYGQQLAHNLKY
Trigger: GTACTTTAAGTTGTGAGCCAGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACATGAAGTTTGATAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTACAATGATAAAAGCTaGATGCCAGTTGTAGGTCAG +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGYNDKS*MPVVGQ
Trigger: CTGACCTACAACTGGCATTCAGCTTTTATCATTGTA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAAACAAAGATAAAAGATaGGATACACTGGGCTTTCTC +
Preference number: 2 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSNKDKR*DTLGFL
Trigger: GAGAAAGCCCAGTGTATCCCATCTTTTATCTTTGTT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTAAACATGCTTTTCTTTaGTTGCCAAAGCCAAAAAGT +
Preference number: 2 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAKHAFL*LPKPKS
Trigger: ACTTTTTGGCTTTGGCAACCAAAGAAAAGCATGTTT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTTACAGAGTATGCTCTTaGAGCTGGATTCCATCAGCA +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLYRVCS*SWIPSA
Trigger: TGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTA...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAAATGTGGACAGCCTCTaGGTACATTTGGACATCTTG +
Preference number: 2 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLINVDSL*VHLDIL
Trigger: CAAGATGTCCAAATGTACTCAGAGGCTGTCCACATT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTTTCCATGTGGAATGTaGAGGTCAATATTGGATTTC +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGFPCGM*RSILDF
Trigger: GAAATCCAATATTGACCTTCACATTCCACATGGAAA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGATGGCCCTGCCTCCATaGCTTGTTGAACATGATGAT +
Preference number: 2 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLMALPP*LVEHDD
Trigger: ATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
3UTR-3UTR GCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGATGTCCAATCAACATTaGCAAATGGGAGAACAGTAT +
Preference number: 2 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGMSNQH*QMGEQY
Trigger: ATACTGTTCTCCCATTTGGCAATGTTGATTGGACAT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATTGAAAGGGCTAGTTTaGCTGTTAGCAGGATCTTGG +
Preference number: 2 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLILKGLV*LLAGSW
Trigger: CCAAGATCCTGCTAACAGGCAAACTAGCCCTTTCAA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAAAGGATTTATCAACCTaGAGAGAGTGCAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIKDLST*RECSPS
Trigger: AGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCCAGTCCAATCCTCCTaGGAGGTACTAGTCTTATTT +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLPVQSS*EVLVLF
Trigger: AAATAAGACTAGTACCTCCCAGGAGGATTGGACTGG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp AATAAATGTTTATATTTCTATCAAACTTCATGTGGTTACATGGGCTaGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: NKCLYFYQTSCGYMG*TSALVTQYGQQLAH
Trigger: GTGAGCCAGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACATGAAGTTTGATAGAAATATAAACATTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp TGTCTGTGCGTGCACTCGAACGGCAAGTCGTGGAGATTACATTCATaGGCAGCAAAGAATAGAAACGGAAAAATTCAGTTAAGTATTACT +
Preference number: 2 (lower is better)
Translates to: CLCVHSNGKSWRLHS*AAKNRNGKIQLSIT
Trigger: AGTAATACTTAACTGAATTTTTCCGTTTCTATTCTTTGCTGCCAATGAATGTAATCTCCACGACTTGCCGTTCGAGTGCACGCACAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTGAAGTCTCCGAGAGGTaGCCAAAGTCATTCTATTAT +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLEVSER*PKSFYY
Trigger: ATAATAGAATGACTTTGGTCACCTCTCGGAGACTTC...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCTCGCTACTTTATTTTaGCAGTTTAGGATCAGGGAC +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLLATLF*QFRIRD
Trigger: GTCCCTGATCCTAAACTGTCAAAATAAAGTAGCGAG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGTTTTATGCTTCTTCTTaGAGGCAGCTTCACCTCCAC +
Preference number: 2 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLFYASS*RQLHLH
Trigger: GTGGAGGTGAAGCTGCCTCCAAGAAGAAGCATAAAA...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp AAATATTCTGACACTGTGTTCTCCTGGGACATTAAAAAGAGAACATaGCATGACCGAAGGGTTGACGTTTGCAAGAGTTTGAATACTTGG +
Preference number: 2 (lower is better)
Translates to: KYSDTVFSWDIKKRT*HDRRVDVCKSLNTW
Trigger: CCAAGTATTCAAACTCTTGCAAACGTCAACCCTTCGGTCATGCAATGTTCTCTTTTTAATGTCCCAGGAGAACACAGTGTCAGAATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp TTCTACCATTTGCATAGCAGAAAAATAGTACCCACAGAGAAGCATTaGACCCACTCATATTTCTTAGAGGCATGGAAGCTATCTGTTACG +
Preference number: 2 (lower is better)
Translates to: FYHLHSRKIVPTEKH*THSYFLEAWKLSVT
Trigger: CGTAACAGATAGCTTCCATGCCTCTAAGAAATATGAGTGGGTCAAATGCTTCTCTGTGGGTACTATTTTTCTGCTATGCAAATGGTAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp CTTGAAATGTTGAATAAAAGACCCTATATCAAACTTACACAGGTCTaGGCTCATGGTAATCTCTGGATGTGTGTGTTGGGTCTGAATCCA +
Preference number: 2 (lower is better)
Translates to: LEMLNKRPYIKLTQV*AHGNLWMCVLGLNP
Trigger: TGGATTCAGACCCAACACACACATCCAGAGATTACCATGAGCCAAGACCTGTGTAAGTTTGATATAGGGTCTTTTATTCAACATTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTGGGTCTTCTCTCTGGTaGCTTTTTGATGTTAAAATG +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLGSSLW*LFDVKM
Trigger: CATTTTAACATCAAAAAGTCACCAGAGAGAAGACCC...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTTTTTACCAACTGCCTTaGCCAAGTGAAGTGATTACA +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLFYQLP*PSEVIT
Trigger: TGTAATCACTTCACTTGGCCAAGGCAGTTGGTAAAA...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTATGTACAGTTGTTTCTaGAGAATGTGTCTAGGGATT +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLMYSCF*RMCLGI
Trigger: AATCCCTAGACACATTCTTCAGAAACAACTGTACAT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTCTGTTTTTCCAACCGTaGACATGGAATTATTTCAAA +
Preference number: 2 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPLFFQP*TWNYFK
Trigger: TTTGAAATAATTCCATGTGCACGGTTGGAAAAACAG...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp AATGTACAATCTTTCAAGATTTCTTCCTTGGAGTATTTCTCAAACTaGAGCATTAGGATGAGTACAGGAAGGGAGAGCAAGGTATCTACA +
Preference number: 2 (lower is better)
Translates to: NVQSFKISSLEYFSN*SIRMSTGRESKVST
Trigger: TGTAGATACCTTGCTCTCCCTTCCTGTACTCATCCTAATGCTCAAGTTTGAGAAATACTCCAAGGAAGAAATCTTGAAAGATTGTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp GACAAGGTTTCTGGCATTATGATATGCCACCCTTTTCTTTATGGATaGACTATTGTGCTTGCTCGGTATGAGTTCAGTTTACTATCAAAA +
Preference number: 2 (lower is better)
Translates to: DKVSGIMICHPFLYG*TIVLARYEFSLLSK
Trigger: TTTTGATAGTAAACTGAACTCATACCGAGCAAGCACAATAGTCAATCCATAAAGAAAAGGGTGGCATATCATAATGCCAGAAACCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR GCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCCACATGACAGTTATTaGTTCTTAGAAATGAATGTG +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLPHDSY*FLEMNV
Trigger: CACATTCATTTCTAAGAAGCAATAACTGTCATGTGG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTAAACCCATTTACATTTaGATGGTTTCACTTTCCACA +
Preference number: 2 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLKPIYI*MVSLST
Trigger: TGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp TGGAGTGTCAAATTTCTCACAGGATTACCGATGGCAGTAAAAACCTaGTTCTCCTTAGAGTTTTGGACTGAAACTTCAAAGACAATATTT +
Preference number: 2 (lower is better)
Translates to: WSVKFLTGLPMAVKT*FSLEFWTETSKTIF
Trigger: AAATATTGTCTTTGAAGTTTCAGTCCAAAACTCTAAGGAGAACAAGGTTTTTACTGCCATCGGTAATCCTGTGAGAAATTTGACACTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp ACAAAGGACACTGAAAGGCAAAGCTGTTGTGGGATAAGAAACAATTaGCTGTTATCTTCTAATATCAAGACCTTTTTAATGGACCACACA +
Preference number: 2 (lower is better)
Translates to: TKDTERQSCCGIRNN*LLSSNIKTFLMDHT
Trigger: TGTGTGGTCCATTAAAAAGGTCTTGATATTAGAAGATAACAGCAAATTGTTTCTTATCCCACAACAGCTTTGCCTTTCAGTGTCCTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 90 bp TATTCTTCTGTGGGCTTACATGATTACGACAGAGATGCTTACCCTTaGAAATCACATATAACGATGGTGCTATACAAACATCACAAATAT +
Preference number: 2 (lower is better)
Translates to: YSSVGLHDYDRDAYP*KSHITMVLYKHHKY
Trigger: ATATTTGTGATGTTTGTATAGCACCATCGTTATATGTGATTTCAAAGGGTAAGCATCTCTGTCGTAATCATGTAAGCCCACAGAAGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp TGTACAAGAGCCATAGGAGCACAAAGAGGCAGGATGTaGGGAGCTTGGCAGTCCGGGGCCCACCCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: CTRAIGAQRGRM*GAWQSGAHPAH
Trigger: GTGAGCTGGGTGGGCCCCGGACTGCCAAGCTCCTCACATCCTGCCTCTTTGTGCTCCTATGGCTCTTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR GCA 72 bp TGTGCCAGGGGACACTTTGAACTGTTCCCCATTGGCTaGGTGGTAGATGGCAGCGATGGACCAGGCCACACC +
Preference number: 3 (lower is better)
Translates to: CARGHFELFPIG*VVDGSDGPGHT
Trigger: GGTGTGGCCTGGTCCATCGCTGCCATCTACCACGCAGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR CCA 72 bp AGAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTaGTGGGACTGGGTGGGCCTCCTACTCCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: RGPMWSKMSRYV*WDWVGLLLLCS
Trigger: GGAGCAGAGGAGTAGGAGGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp TTGGGATGGGGCACCTGGGGGCTTAGCTGGGCTGAATaGTGGAAGAAGGACCTTGCCAATCACAGTCCAGAG +
Preference number: 3 (lower is better)
Translates to: LGWGTWGLSWAE*WKKDLANHSPE
Trigger: CTCTGGACTGTGATTGGCAAGGTCCTTCTTCCAGCATTCAGCCCAGCTAAGCCCCCAGGTGCCCCATCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GGATGGGGCACCTGGGGGCTTAGCTGGGCTGAATGCTaGAAGAAGGACCTTGCCAATCACAGTCCAGAGCTA +
Preference number: 3 (lower is better)
Translates to: GWGTWGLSWAEC*KKDLANHSPEL
Trigger: TAGCTCTGGACTGTGATTGGCAAGGTCCTTCTTCCAGCATTCAGCCCAGCTAAGCCCCCAGGTGCCCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp AGAAACCGTATCCGACAAGGGGCTGAGCTGAGGTTGTaGTATGGCCCCAGTCCTAGGATTGGTCCCACCTAC +
Preference number: 3 (lower is better)
Translates to: RNRIRQGAELRL*YGPSPRIGPTY
Trigger: GTAGGTGGGACCAATCCTAGGACTGGGGCCATACCACAACCTCAGCTCAGCCCCTTGTCGGATACGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp CGTCTGCATACTGGTCCTGGGTGGCTGCCACTTTGCTaGCAAATGTGTCTGGCACTGATGTTCCAAGTGCGA +
Preference number: 3 (lower is better)
Translates to: RLHTGPGWLPLC*QMCLALMFQVR
Trigger: TCGCACTTGGAACATCAGTGCCAGACACATTTGCCAGCAAAGTGGCAGCCACCCAGGACCAGTATGCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR GCA 72 bp TCTGCTCCCAGCACACCAAAACACGTGTTTAGAAAATaGCGATTCGTGAACCCGGGAGGTGGAGCTTGCAGT +
Preference number: 3 (lower is better)
Translates to: SAPSTPKHVFRK*RFVNPGGGACS
Trigger: ACTGCAAGCTCCACCTCCCGGGTTCACGAATCGGCATTTTCTAAACACGTGTTTTGGTGTGCTGGGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGTACAGAGTATGCTCTaGAAGCTGGATTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGVQSML*KLDSIS
Trigger: GCTGATGGAATCCAGCTTCAAGAGCATACTCTGTAC...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
3UTR TCA 72 bp CCATCGGGACCGCCCAGCATTTTGAAATGTACTGCGTaGTGGGAAGACAACAAGATGGTTAGAAGTGGTGAG +
Preference number: 3 (lower is better)
Translates to: PSGPPSILKCTA*WEDNKMVRSGE
Trigger: CTCACCACTTCTAACCATCTTGTTGTCTTCCCATCACGCAGTACATTTCAAAATGCTGGGCGGTCCCGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp AATGTCCTCAGCGACAGACAATGGACACTCAAATGCTaGAGCTATGACCAGCAACAGGGGAGGGTCACAGAT +
Preference number: 3 (lower is better)
Translates to: NVLSDRQWTLKC*SYDQQQGRVTD
Trigger: ATCTGTGACCCTCCCCTGTTGCTGGTCATAGCTTCAGCATTTGAGTGTCCATTGTCTGTCGCTGAGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp GATCACCTACTTTTACATGTGTGTCTCTGGGCTGTATaGTGTAGCAAGAGAGGGGACAGAGGAGATCCAGTG +
Preference number: 3 (lower is better)
Translates to: DHLLLHVCLWAV*CSKRGDRGDPV
Trigger: CACTGGATCTCCTCTGTCCCCTCTCTTGCTACAGCATACAGCCCAGAGACACACATGTAAAAGTAGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTGCCTCCATGCCTTGTaGAACATGATGATGCCCCTG +
Preference number: 3 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQCLHAL*NMMMPL
Trigger: CAGGGGCATCATCATGTTCAACAAGGCATGGAGGCA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
3UTR GCA 72 bp AGTGAAATACGTACCATTTCTTGTGGGCTGGAAACCTaGAGTGCTTTCCTTTGGGAGTTCCACCTCTCAGTG +
Preference number: 3 (lower is better)
Translates to: SEIRTISCGLET*SAFLWEFHLSV
Trigger: CACTGAGAGGTGGAACTCCCAAAGGAAAGCACTGCAGGTTTCCAGCCCACAAGAAATGGTACGTATTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp CTATCAAACTTCATGTGGTTACATGGGCTTGACAAGTaGATTGGTGACCCAATATGGGCAGCAGCTGGCTCA +
Preference number: 3 (lower is better)
Translates to: LSNFMWLHGLDK*IGDPIWAAAGS
Trigger: TGAGCCAGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACATGAAGTTTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp ATGCGCCTCTCCTCTTCCTCTTTGCTGGTCAGTGGCTaGTTGTCATCATATTCGTCTGTTATTGTGAAGCCA +
Preference number: 3 (lower is better)
Translates to: MRLSSSSLLVSG*LSSYSSVIVKP
Trigger: TGGCTTCACAATAACAGACGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGGAGAGGCGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CAA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAGTACAGAGTATGCTCTaGAAGCTGGATTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSVQSML*KLDSIS
Trigger: GCTGATGGAATCCAGCTTCAAGAGCATACTCTGTAC...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTCCCTGCCTCCATGCCTaGTTGAACATGATGATGCCC +
Preference number: 3 (lower is better)
Translates to: RYHNNISERHMKKEQMFSPCLHA*LNMMMP
Trigger: GGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGATGATCACTTCCAACTaGGTGTGCTCTCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQMITSN*VCSPRM
Trigger: CATCCTGGGAGAGCACACCAAGTTGGAAGTGATCAT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGTACAGAGTATGCTCTaGAAGCTGGATTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQVQSML*KLDSIS
Trigger: GCTGATGGAATCCAGCTTCAAGAGCATACTCTGTAC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
3UTR-3UTR CAA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGTACAGAGTATGCTCTaGAAGCTGGATTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDVQSML*KLDSIS
Trigger: GCTGATGGAATCCAGCTTCAAGAGCATACTCTGTAC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
3UTR-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTTTTATGCTTCTTCTaGGAGGCAGCTTCACCTCCA +
Preference number: 3 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLLCFF*EAASPP
Trigger: TGGAGGTGAAGCTGCCTCCAAGAAGAAGCATAAAAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACACTGGTCAGTGGCTGCTaGTCATCATATTCGTCTGTT +
Preference number: 3 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTLVSGC*SSYSSV
Trigger: AACAGACGAATATGATGACAAGCAGCCACTGACCAG...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR TCA 72 bp CAGGTTCTCTTCCTTAAACAAGCACCTGCCACTGATTaGCAGCTCTACCAAGATTGCTTAAGGCAGACATCC +
Preference number: 3 (lower is better)
Translates to: QVLFLKQAPATD*QLYQDCLRQTS
Trigger: GGATGTCTGCCTTAAGCAATCTTGGTAGAGCTGTCAATCAGTGGCAGGTGCTTGTTTAAGGAAGAGAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp AATCAAAGCCTTAAGGATTTATCAACCTGGAGAGAGTaGAGCCCTTCTAGACTGAGCTGCAAAGATGGCCCT +
Preference number: 3 (lower is better)
Translates to: NQSLKDLSTWRE*SPSRLSCKDGP
Trigger: AGGGCCATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTTAAGGCTTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
3UTR CCA 72 bp ATTTCTTGTGGGCTGGAAACCTGCAGTGCTTTCCTTTaGGAGTTCCACCTCTCAGTGGTTGCTCCTTTTATA +
Preference number: 3 (lower is better)
Translates to: ISCGLETCSAFL*EFHLSVVAPFI
Trigger: TATAAAAGGAGCAACCACTGAGAGGTGGAACTCCCAAAGGAAAGCACTGCAGGTTTCCAGCCCACAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GTTTACAGAGATCACCTACTTTTACATGTGTGTCTCTaGGCTGTATGCTGTAGCAAGAGAGGGGACAGAGGA +
Preference number: 3 (lower is better)
Translates to: VYRDHLLLHVCL*AVCCSKRGDRG
Trigger: TCCTCTGTCCCCTCTCTTGCTACAGCATACAGCCCAGAGACACACATGTAAAAGTAGGTGATCTCTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp TTACATGGGCTTGACAAGTGCATTGGTGACCCAATATaGGCAGCAGCTGGCTCACAACTTAAAGTACCTTCA +
Preference number: 3 (lower is better)
Translates to: LHGLDKCIGDPI*AAAGSQLKVPS
Trigger: TGAAGGTACTTTAAGTTGTGAGCCAGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GCAAAGATGTATTTCCCGTCACGAAGTGGCCAGAAGTaGGTGATTGTTCTAAGTACCTTGTTGGTGAGGCTT +
Preference number: 3 (lower is better)
Translates to: AKMYFPSRSGQK*VIVLSTLLVRL
Trigger: AAGCCTCACCAACAAGGTACTTAGAACAATCACCCACTTCTGGCCACTTCGTGACGGGAAATACATCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp TCCTTCCCCTGCAAAGATGTATTTCCCGTCACGAAGTaGCCAGAAGTGGGTGATTGTTCTAAGTACCTTGTT +
Preference number: 3 (lower is better)
Translates to: SFPCKDVFPVTK*PEVGDCSKYLV
Trigger: AACAAGGTACTTAGAACAATCACCCACTTCTGGCCACTTCGTGACGGGAAATACATCTTTGCAGGGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp TGTGTGTGTCTGTGCGTGCACTCGAACGGCAAGTCGTaGAGATTACATTCATTGGCAGCAAAGAATAGAAAC +
Preference number: 3 (lower is better)
Translates to: CVCLCVHSNGKS*RLHSLAAKNRN
Trigger: GTTTCTATTCTTTGCTGCCAATGAATGTAATCTCCACGACTTGCCGTTCGAGTGCACGCACAGACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGCTGGAAGAAGGACCTaGCCAATCACAGTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLAGRRT*PITVQS
Trigger: GCTCTGGACTGTGATTGGCAAGGTCCTTCTTCCAGC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACTGCAGTGCTTTCCTTaGGGAGTTCCACCTCTCAGT +
Preference number: 3 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLILQCFP*GVPPLS
Trigger: ACTGAGAGGTGGAACTCCCAAAGGAAAGCACTGCAG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTAGATCAGTCTGGGCCTaGTGGTTCATTTGGGCCAGA +
Preference number: 3 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLRSVWA*WFIWAR
Trigger: TCTGGCCCAAATGAACCACAAGGCCCAGACTGATCT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCTGGGTGGCTGCCACTTaGCTGGCAAATGTGTCTGGC +
Preference number: 3 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTWVAAT*LANVSG
Trigger: GCCAGACACATTTGCCAGCAAAGTGGCAGCCACCCA...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGTGCCAGGGGACACTTaGAACTGTTCCCCATTGGCT +
Preference number: 3 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLVPGDT*NCSPLA
Trigger: AGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCAC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR TCA 72 bp ACTGTGATTTCGTTAGAGCTATTTGGTAATCAGGTGTaGGTGAGAGGAATGGGACAATGGGGAAAAGAGCCG +
Preference number: 3 (lower is better)
Translates to: TVISLELFGNQV*VRGMGQWGKEP
Trigger: CGGCTCTTTTCCCCATTGTCCCATTCCTCTCACTCACACCTGATTACCAAATAGCTCTAACGAAATCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp AACAAACCAGCACTATCTACCATCTGTGCCAGACAGTaGAGATGTGAAATAAATACTTTGCAGGGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: NKPALSTICARQ*RCEINTLQGGV
Trigger: CACCCCTCCCTGCAAAGTATTTATTTCACATCTGCACTGTCTGGCACAGATGGTAGATAGTGCTGGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp GAAATCTCAGGTACCAACTGTTTGAAAGGGCTAGTTTaGCTGTTAGCAGGATCTTGGAGGGAAAATGCTAGG +
Preference number: 3 (lower is better)
Translates to: EISGTNCLKGLV*LLAGSWRENAR
Trigger: CCTAGCATTTTCCCTCCAAGATCCTGCTAACAGGCAAACTAGCCCTTTCAAACAGTTGGTACCTGAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp GAAAGAGCTCCTAGAAGAGTCACTGGTAGAACCAACTaGTCACAGCTTCTTTGGGTGCTAGACTCATTTAAC +
Preference number: 3 (lower is better)
Translates to: ERAPRRVTGRTN*SQLLWVLDSFN
Trigger: GTTAAATGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCTAGGAGCTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp TCAAAGAAAGTGAAATACGTACCATTTCTTGTGGGCTaGAAACCTGCAGTGCTTTCCTTTGGGAGTTCCACC +
Preference number: 3 (lower is better)
Translates to: SKKVKYVPFLVG*KPAVLSFGSST
Trigger: GGTGGAACTCCCAAAGGAAAGCACTGCAGGTTTCCAGCCCACAAGAAATGGTACGTATTTCACTTTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp TGTATTAGAAGCCTTCTAACTACTGATAGATCAGTCTaGGCCTTGTGGTTCATTTGGGCCAGACTCAAGCTC +
Preference number: 3 (lower is better)
Translates to: CIRSLLTTDRSV*ALWFIWARLKL
Trigger: GAGCTTGAGTCTGGCCCAAATGAACCACAAGGCCCAGACTGATCTATCAGTAGTTAGAAGGCTTCTAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp ATGTGTCTGGCACTGATGTTCCAAGTGCGACGAACACGACTGCAGTCACAGAATAAAACCCATTTACATTaGGATGGTTTCACTTTCCAC +
Preference number: 3 (lower is better)
Translates to: MCLALMFQVRRTRLQSQNKTHLH*DGFTFH
Trigger: GTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTT...ATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAACATCAGTGCCAGACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR-3UTR CAA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTATGACTGGAACAGGATaGTGCAAGCCATGGATGCCT +
Preference number: 3 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLMTGTG*CKPWMP
Trigger: AGGCATCCATGGCTTGCACAATCCTGTTCCAGTCAT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTACTTAAACATCCCCTaGGGAAGAAACTGTACTACC +
Preference number: 3 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGYLNIP*GRNCTT
Trigger: GGTAGTACAGTTTCTTCCCAAGGGGATGTTTAAGTA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTTCAGGTACCAACTGTTaGAAAGGGCTAGTTTGCCTG +
Preference number: 3 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPSGTNC*KGLVCL
Trigger: CAGGCAAACTAGCCCTTTCAAACAGTTGGTACCTGA...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTATCTTCTGGATAGCTTaGCAAAAATGCAATCTTTGC +
Preference number: 3 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAIFWIA*QKCNLC
Trigger: GCAAAGATTGCATTTTTGCAAAGCTATCCAGAAGAT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp CGTACACAGTATGTACAATATGCTAGTTCCTTTCTTTaGCCTTGTCCAGGAAGTTACCAATGTCTCCTCGGT +
Preference number: 3 (lower is better)
Translates to: RTQYVQYASSFL*PCPGSYQCLLG
Trigger: ACCGAGGAGACATTGGTAACTTCCTGGACAAGGGCAAAGAAAGGAACTAGCATATTGTACATACTGTGTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTaGCTTCTTTCTTACTCAGCAACTACTGATATAATC +
Preference number: 3 (lower is better)
Translates to: EETTLLKARWSP*LLSYSATTDII
Trigger: GATTATATCAGTAGTTGCTGAGTAAGAAAGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp AGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTaGGTGCTAGACTCATTTAACAACCAGTTGTTGGAA +
Preference number: 3 (lower is better)
Translates to: RVTGRTNCSQLL*VLDSFNNQLLE
Trigger: TTCCAACAACTGGTTGTTAAATGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGGTAGTTTCCAATAACTaGGTATTGACATTACTGCCC +
Preference number: 3 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGVVSNN*VLTLLP
Trigger: GGGCAGTAATGTCAATACCAAGTTATTGGAAACTAC...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp GTAACAGGTATCACAACAACATTTCCGAACGGCACATaGAGAAGGAGCAAATGTTCAGTCATGACTGGAACA +
Preference number: 3 (lower is better)
Translates to: VTGITTTFPNGT*RRSKCSVMTGT
Trigger: TGTTCCAGTCATGACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp CTGCAATCTCACTCCTTACTCTTGATAAGAGAGCTCTaGGAAATCTCAGGTACCAACTGTTTGAAAGGGCTA +
Preference number: 3 (lower is better)
Translates to: LQSHSLLLIREL*EISGTNCLKGL
Trigger: TAGCCCTTTCAAACAGTTGGTACCTGAGATTTCTCAGAGCTCTCTTATCAAGAGTAAGGAGTGAGATTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp CTGACAAGTTTGGTTTCTCCTAAGGGAGGCCTGGAGTaGCAGTTACAACATTTTTCTCCAGAATATCACTGT +
Preference number: 3 (lower is better)
Translates to: LTSLVSPKGGLE*QLQHFSPEYHC
Trigger: ACAGTGATATTCTGGAGAAAAATGTTGTAACTGTCACTCCAGGCCTCCCTTAGGAGAAACCAAACTTGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAAAACCCATTTACATTaGGATGGTTTCACTTTCCAC +
Preference number: 3 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQKTHLH*DGFTFH
Trigger: GTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
3UTR-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATTTGAAAGGGCTAGTTaGCCTGTTAGCAGGATCTTG +
Preference number: 3 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIFERAS*PVSRIL
Trigger: CAAGATCCTGCTAACAGGCAAACTAGCCCTTTCAAA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTGAATGGTGTGTGCTTTaGTACAAAACTTGTGGATCC +
Preference number: 3 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPEWCVL*YKTCGS
Trigger: GGATCCACAAGTTTTGTACAAAAGCACACACCATTC...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGAAAAAGGTCACTGATTaGGAATCCATTCCAATCTCA +
Preference number: 3 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGKKVTD*ESIPIS
Trigger: TGAGATTGGAATGGATTCCAAATCAGTGACCTTTTT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGAGCAGCACCCCCACATaGATGAAAGCAAAAATGGTG +
Preference number: 3 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLSSTPT*MKAKMV
Trigger: CACCATTTTTGCTTTCATCAATGTGGGGGTGCTGCT...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR TCA 72 bp TTGGTCACCCTGGCTTCTTTCTTACTCAGCAACTACTaGTATAATCAAAGAGGACTAGACTGGACAGTGAAA +
Preference number: 3 (lower is better)
Translates to: LVTLASFLLSNY*YNQRGLDWTVK
Trigger: TTTCACTGTCCAGTCTAGTCCTCTTTGATTATATCAGTAGTTGCTGAGTAAGAAAGAAGCCAGGGTGACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp AGAACCTTTGACAAAACTGAAAATGTGGACAGCCTCTaGGTACATTTGGACATCTTGACAGGCAGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: RTFDKTENVDSL*VHLDILTGREK
Trigger: TTTTTCCCTGCCTGTCAAGATGTCCAAATGTACTCAGAGGCTGTCCACATTTTCAGTTTTGTCAAAGGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp AATAATAGGTTCACTCTCAAACTGGCAACAAGCACGTaGTTGAGCTGCATGAATCTGGAAAGGCTTGTCAAA +
Preference number: 3 (lower is better)
Translates to: NNRFTLKLATST*LSCMNLERLVK
Trigger: TTTGACAAGCCTTTCCAGATTCATGCAGCTCAATCACGTGCTTGTTGCCAGTTTGAGAGTGAACCTATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp GTTTTAAAAGAACTAGATAAGCTGATTAGAAATCTCTaGCTGGAGAGGCTGCCTCAGACTCAGTTATGCCAG +
Preference number: 3 (lower is better)
Translates to: VLKELDKLIRNL*LERLPQTQLCQ
Trigger: CTGGCATAACTGAGTCTGAGGCAGCCTCTCCAGTCAGAGATTTCTAATCAGCTTATCTAGTTCTTTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp AGTGCATTCTTGGATTTAACTAGGCGTATCTGTCTTTaGAGTCAACAAATTAGGAGGGCTGGGCTATATCTT +
Preference number: 3 (lower is better)
Translates to: SAFLDLTRRICL*SQQIRRAGLYL
Trigger: AAGATATAGCCCAGCCCTCCTAATTTGTTGACTGCAAAGACAGATACGCCTAGTTAAATCCAAGAATGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GTTCCATTGCCAACAAAGATAAAAGATGGGATACACTaGGCTTTCTCAGTGATCTGGATCACCAACATGATT +
Preference number: 3 (lower is better)
Translates to: VPLPTKIKDGIH*AFSVIWITNMI
Trigger: AATCATGTTGGTGATCCAGATCACTGAGAAAGCCCAGTGTATCCCATCTTTTATCTTTGTTGGCAATGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GATATGGCAGCTGCAGGAAGTCTGAATTCTGAGAGTTaGTTGTACATAACCTCAGGAATTTATTCTTCTGTG +
Preference number: 3 (lower is better)
Translates to: DMAAAGSLNSES*LYITSGIYSSV
Trigger: CACAGAAGAATAAATTCCTGAGGTTATGTACAACCAACTCTCAGAATTCAGACTTCCTGCAGCTGCCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCGGTTATTCTTACTGTTaGCATAGGGGATGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTGYSYC*HRGWQV
Trigger: CACCTGCCATCCCCTATGCAAACAGTAAGAATAACC...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCCCACAGAGAAGCATTaGACCCACTCATATTTCTTA +
Preference number: 3 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLPTEKH*THSYFL
Trigger: TAAGAAATATGAGTGGGTCAAATGCTTCTCTGTGGG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTTCAAGATTTCAAGGCTaGAGCCAATACAGAAACCAT +
Preference number: 3 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPSRFQG*SQYRNH
Trigger: ATGGTTTCTGTATTGGCTCAAGCCTTGAAATCTTGA...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTCACTGTAATTTAGCCTaGAGCTTAAGAGTTTCTGTT +
Preference number: 3 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPHCNLA*SLRVSV
Trigger: AACAGAAACTCTTAAGCTCAAGGCTAAATTACAGTG...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp ATAAAAGATGGGATACACTGGGCTTTCTCAGTGATCTaGATCACCAACATGATTGCCCTTCTTGGTTTAAAA +
Preference number: 3 (lower is better)
Translates to: IKDGIHWAFSVI*ITNMIALLGLK
Trigger: TTTTAAACCAAGAAGGGCAATCATGTTGGTGATCCAGATCACTGAGAAAGCCCAGTGTATCCCATCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp TGCATGCTAAAAAGTTGTCTGACATGTAACTGTTTATaGGCTTATGATCCTGGATGCAGGAAAGGATGTAGA +
Preference number: 3 (lower is better)
Translates to: CMLKSCLTCNCL*AYDPGCRKGCR
Trigger: TCTACATCCTTTCCTGCATCCAGGATCATAAGCCCATAAACAGTTACATGTCAGACAACTTTTTAGCATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp ATCAAACTTACACAGGTCTTGGCTCATGGTAATCTCTaGATGTGTGTGTTGGGTCTGAATCCATTTATCTTA +
Preference number: 3 (lower is better)
Translates to: IKLTQVLAHGNL*MCVLGLNPFIL
Trigger: TAAGATAAATGGATTCAGACCCAACACACACATCCAGAGATTACCATGAGCCAAGACCTGTGTAAGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp ACAAAGATTTTCCATGTGGAATGTGAAGGTCAATATTaGATTTCCCCCACCAGACATTCTTACAATGTGGGT +
Preference number: 3 (lower is better)
Translates to: TKIFHVECEGQY*ISPTRHSYNVG
Trigger: ACCCACATTGTAAGAATGTCTGGTGGGGGAAATCCAATATTGACCTTCACATTCCACATGGAAAATCTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTACGATGATGTGCTTTTaGAATGGGGTTATTCTTACT +
Preference number: 3 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLTMMCF*NGVILT
Trigger: AGTAAGAATAACCCCATTCAAAAAGCACATCATCGT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp CCTTTTCACTTTTCTCTCACCATGTACAGTTGTTTCTaGAGAATGTGTCTAGGGATTGAGTCAGAACTATCA +
Preference number: 3 (lower is better)
Translates to: PFHFSLTMYSCF*RMCLGIESELS
Trigger: TGATAGTTCTGACTCAATCCCTAGACACATTCTTCAGAAACAACTGTACATGGTGAGAGAAAAGTGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp ACAGCTCTACCAAGATTGCTTAAGGCAGACATCCGCTaGAAATGCTTATGGTGCATACTTGTTTTTAAAAAG +
Preference number: 3 (lower is better)
Translates to: TALPRLLKADIR*KCLWCILVFKK
Trigger: CTTTTTAAAAACAAGTATGCACCATAAGCATTTTCAGCGGATGTCTGCCTTAAGCAATCTTGGTAGAGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GAAATTCATGATCACCTCTTAGGGAGACAAGGTTTCTaGCATTATGATATGCCACCCTTTTCTTTATGGATT +
Preference number: 3 (lower is better)
Translates to: EIHDHLLGRQGF*HYDMPPFSLWI
Trigger: AATCCATAAAGAAAAGGGTGGCATATCATAATGCCAGAAACCTTGTCTCCCTAAGAGGTGATCATGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGTCTTCTTAATGAGTTaGTCCACAGTACTCTTGAAT +
Preference number: 3 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLVFLMS*STVLLN
Trigger: ATTCAAGAGTACTGTGGACAAACTCATTAAGAAGAC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
3UTR TCA 72 bp AGTTATCAGATGTATATCAGTCTCGCTACTTTATTTTaGCAGTTTAGGATCAGGGACCTTTTGCTGTGGAAT +
Preference number: 3 (lower is better)
Translates to: SYQMYISLATLF*QFRIRDLLLWN
Trigger: ATTCCACAGCAAAAGGTCCCTGATCCTAAACTGTCAAAATAAAGTAGCGAGACTGATATACATCTGATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp GCCAACAATTATTATTATGGCTTATTGGAAGAGTGTTaGATTGTACCACTGACCTACGAAAACCACCACAAA +
Preference number: 3 (lower is better)
Translates to: ANNYYYGLLEEC*IVPLTYENHHK
Trigger: TTTGTGGTGGTTTTCGTAGGTCAGTGGTACAATTCAACACTCTTCCAATAAGCCATAATAATAATTGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR GCA 72 bp TTTTGCTTACCTTTCCCCCTGACAAATTTAGCTTTGTaGCTCAGTGGTAATAAAGTTGGAATATATTACTGC +
Preference number: 3 (lower is better)
Translates to: FCLPFPLTNLAL*LSGNKVGIYYC
Trigger: GCAGTAATATATTCCAACTTTATTACCACTGAGGCACAAAGCTAAATTTGTCAGGGGGAAAGGTAAGCAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp TATAGTAATACTATCCATGGATCTGATGTTGAGTCGTaGAGGCTTCAAGCTCTGAAGAAGTATGAACTAATT +
Preference number: 3 (lower is better)
Translates to: YSNTIHGSDVES*RLQALKKYELI
Trigger: AATTAGTTCATACTTCTTCAGAGCTTGAAGCCTCCACGACTCAACATCAGATCCATGGATAGTATTACTATA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp TTTCAGTTTTGTAAAAATTGGTCACGGCAACAAGTTTaGAATAATAGGTTCACTCTCAAACTGGCAACAAGC +
Preference number: 3 (lower is better)
Translates to: FQFCKNWSRQQV*NNRFTLKLATS
Trigger: GCTTGTTGCCAGTTTGAGAGTGAACCTATTATTTCAAACTTGTTGCCGTGACCAATTTTTACAAAACTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp TCTTTGAAGGTCATTTGTGATGGGTCCTTCAAACTGTaGATACAGAATATGAATAGGCTATTCTTCCCTTTT +
Preference number: 3 (lower is better)
Translates to: SLKVICDGSFKL*IQNMNRLFFPF
Trigger: AAAAGGGAAGAATAGCCTATTCATATTCTGTATTCACAGTTTGAAGGACCCATCACAAATGACCTTCAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp ATCAAATGCTGGAATTCTAATCTAGCATTATGCAGTTaGTCCAAGTCATTGTACCTCTCATTTACAAGGCTT +
Preference number: 3 (lower is better)
Translates to: IKCWNSNLALCS*SKSLYLSFTRL
Trigger: AAGCCTTGTAAATGAGAGGTACAATGACTTGGATCAACTGCATAATGCTAGATTAGAATTCCAGCATTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GGTGAGATCCAATATTACATGCTGTCAATCATAAAATaGCCAAACGTTCTTGAGATTATGAAACTACACTCA +
Preference number: 3 (lower is better)
Translates to: GEIQYYMLSIIK*PNVLEIMKLHS
Trigger: TGAGTGTAGTTTCATAATCTCAAGAACGTTTGGCCATTTTATGATTGACAGCATGTAATATTGGATCTCACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CCA 72 bp GAGAAGCATTTGACCCACTCATATTTCTTAGAGGCATaGAAGCTATCTGTTACGTTTTTCTATGTTTACATA +
Preference number: 3 (lower is better)
Translates to: EKHLTHSYFLEA*KLSVTFFYVYI
Trigger: TATGTAAACATAGAAAAACGTAACAGATAGCTTCCATGCCTCTAAGAAATATGAGTGGGTCAAATGCTTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR TCA 72 bp TTTTCTTTATGGATTGACTATTGTGCTTGCTCGGTATaGGTTCAGTTTACTATCAAAATTGTCCACCAAGTT +
Preference number: 3 (lower is better)
Translates to: FSLWIDYCACSV*VQFTIKIVHQV
Trigger: AACTTGGTGGACAATTTTGATAGTAAACTGAACTCATACCGAGCAAGCACAATAGTCAATCCATAAAGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp GAGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGGCAGCCCTTCTAGACTaGGCTGCAAAGATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ELGSPGPTQLTSDFWPPPAALLD*AAKMAL
Trigger: CAGGGCCATCTTTGCAGCTCAGTCTAGAAGGGCTGC...CGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGACCTTCTAGACTGAGCTaGAAAGATGGCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRPSRLS*KDGPAS
Trigger: GGAGGCAGGGCCATCTTTGCAGCTCAGTCTAGAAGG...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGATCTGCATACTGGTCCTaGGTGGCTGCCACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRSAYWS*VAATLL
Trigger: CAGCAAAGTGGCAGCCACCCAGGACCAGTATGCAGA...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp GAGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGATAATCATCCCCCTCTaGTTGCCAGCTCGATACCTC +
Preference number: 4 (lower is better)
Translates to: ELGSPGPTQLTSDFWPPPIIIPL*LPARYL
Trigger: GAGGTATCGAGCTGGCAAGCAGAGGGGGATGATTAT...CGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp GAGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGTGCCATCCTCTGTTCTaGAGTCAACAAACACAGTGT +
Preference number: 4 (lower is better)
Translates to: ELGSPGPTQLTSDFWPPPCHPLF*SQQTQC
Trigger: ACACTGTGTTTGTTGACTTCAGAACAGAGGATGGCA...CGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGAAAATGTGTCTGGCACTaGTGTTCCAAGTGCGACGAA +
Preference number: 4 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRKCVWH*CSKCDE
Trigger: TTCGTCGCACTTGGAACATCAGTGCCAGACACATTT...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGGAGGCGTCTGCATACTaGTCCTGGGTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLEASAY*SWVAAT
Trigger: AGTGGCAGCCACCCAGGACCAGTATGCAGACGCCTC...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCCTCACCTCCGATTTCTaGCCTCCGCCGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWALTSDF*PPPIQQ
Trigger: CTGCTGTATCGGCGGAGGCCAGAAATCGGAGGTGAG...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCTGCCAGGGGACACTTTaGACTGTTCCCCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWACQGTL*TVPHWL
Trigger: CAGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCA...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGCAAAGAGGCAGGATGTaGGGAGCTTGGCAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRQRGRM*GAWQSG
Trigger: CCCGGACTGCCAAGCTCCTCACATCCTGCCTCTTTG...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGATCACAGTTGTCTTGGTaGTCTCTCCATTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRSQLSW*SLHWVS
Trigger: AGAAACCCAATGGAGAGACCACCAAGACAACTGTGA...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCTCTGCATACTGGTCCTaGGTGGCTGCCACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWASAYWS*VAATLL
Trigger: CAGCAAAGTGGCAGCCACCCAGGACCAGTATGCAGA...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGAGGCGTCTGCATACTaGTCCTGGGTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGREASAY*SWVAAT
Trigger: AGTGGCAGCCACCCAGGACCAGTATGCAGACGCCTC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCAAAGAGGCAGGATGTaGGGAGCTTGGCAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDQRGRM*GAWQSG
Trigger: CCCGGACTGCCAAGCTCCTCACATCCTGCCTCTTTG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCCAAATGCTGAAGCTATaGCCAGCAACAGGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAQMLKL*PATGEG
Trigger: ACCCTCCCCTGTTGCTGGTCATAGCTTCAGCATTTG...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGAAACCCTGTCAGTCTaGTCCAGCTCCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGETLSV*SSSFPC
Trigger: GCAGGGGAAGGAGCTGGATCAGACTGACAGGGTTTC...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGACTTCCAACTTGGTGTaGTCTCCCAGGATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRTSNLV*SPRMGR
Trigger: GCGCCCCATCCTGGGAGAGCACACCAAGTTGGAAGT...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGGGGTGGCTGCCACTTTaGTGGCAAATGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLGWLPL*WQMCLA
Trigger: TGCCAGACACATTTGCCAGCAAAGTGGCAGCCACCC...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTACCTATGGAGGCGTCTaGATACTGGTCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGTYGGV*ILVLGG
Trigger: GCCACCCAGGACCAGTATGCAGACGCCTCCATAGGT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGACCTATGGAGGCGTCTaGATACTGGTCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRTYGGV*ILVLGG
Trigger: GCCACCCAGGACCAGTATGCAGACGCCTCCATAGGT...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGAGCACAAGGGAGAAACTaGACTCTTTCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRAQGRN*TLSHIP
Trigger: AGGAATATGAGAAAGAGTGCAGTTTCTCCCTTGTGC...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGGTAGATGGCAGCGATaGACCAGGCCACACCGATTC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGGRWQR*TRPHRF
Trigger: GAATCGGTGTGGCCTGGTCCATCGCTGCCATCTACC...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATGGCTGCGTGGTAGATaGCAGCGATGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGWLRGR*QRWTRP
Trigger: TGGCCTGGTCCATCGCTGCCATCTACCACGCAGCCA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTTGGGATGGGGCACCTaGGGGCTTAGCTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDLGWGT*GLSWAE
Trigger: TTCAGCCCAGCTAAGCCCCCAGGTGCCCCATCCCAA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATGTGGTGGGACTGGGTaGGCCTCCTACTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGCGGTG*ASYSSA
Trigger: AGCAGAGGAGTAGGAGGCCCACCCAGTCCCACCACA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAATGTCCCGGTATGTGTaGTGGGACTGGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGMSRYV*WDWVGL
Trigger: GAGGCCCACCCAGTCCCACCACACATACCGGGACAT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAACTTCCAACTTGGTGTaGTCTCCCAGGATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGTSNLV*SPRMGR
Trigger: GCGCCCCATCCTGGGAGAGCACACCAAGTTGGAAGT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGCTGGTCCTGGGTGGCTaGCACTTTGCTGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRLVLGG*HFAGKC
Trigger: ACATTTGCCAGCAAAGTGGCAGCCACCCAGGACCAG...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGCTGCAAAGATGGCCCTaGCTCCATGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLLQRWP*LHALLN
Trigger: GTTCAACAAGGCATGGAGGCAGGGCCATCTTTGCAG...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCCTCCCCTCCACCTCTaGCAGTCCCTTCGATGGTTT +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDPPLHL*QSLRWF
Trigger: AAACCATCGAAGGGACTGCCAGAGGTGGAGGGGAGG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGACTCACCTCCGATTTCTaGCCTCCGCCGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGLTSDF*PPPIQQ
Trigger: CTGCTGTATCGGCGGAGGCCAGAAATCGGAGGTGAG...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCCCATTTCTTGTGGGCTaGAAACCTGCAGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAPFLVG*KPAVLS
Trigger: GGAAAGCACTGCAGGTTTCCAGCCCACAAGAAATGG...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGACTGTTCCCCATTGGCTaGGTGGTAGATGGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGLFPIG*VVDGSD
Trigger: ATCGCTGCCATCTACCACGCAGCCAATGGGGAACAG...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCTGTTCCCCATTGGCTaGGTGGTAGATGGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDLFPIG*VVDGSD
Trigger: ATCGCTGCCATCTACCACGCAGCCAATGGGGAACAG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGCCTCCCCTCCACCTCTaGCAGTCCCTTCGATGGTTT +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMPPLHL*QSLRWF
Trigger: AAACCATCGAAGGGACTGCCAGAGGTGGAGGGGAGG...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCATACTGGTCCTGGGTaGCTGCCACTTTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDHTGPG*LPLCWQ
Trigger: TTGCCAGCAAAGTGGCAGCCACCCAGGACCAGTATG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGCGCTCCCATCTTCTGTaGGAAGCACAAAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMRSHLL*EAQSRR
Trigger: CCGCCTGCTTTGTGCTTCCCACAGAAGATGGGAGCG...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCTTTGGGGAGTGTGAATaGATTCTTCCTCCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAFGECE*ILPPFL
Trigger: GAGGAACGGAGGAAGAATCCATTCACACTCCCCAAA...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGCCCGTTGGTCACCCTaGCTTCTTTCTTACTCAGCA +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGARWSP*LLSYSA
Trigger: TGCTGAGTAAGAAAGAAGCCAGGGTGACCAACGGGC...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGCTGAGCTGAGGTTGTaGTATGGCCCCAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMAELRL*YGPSPR
Trigger: CCTAGGACTGGGGCCATACCACAACCTCAGCTCAGC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCTTAGAAATCTCTGACTaGAGAGGCTGCCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWALEISD*RGCLRL
Trigger: GAGTCTGAGGCAGCCTCTCCAGTCAGAGATTTCTAA...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCCGAAGTGGCCAGAAGTaGGTGATTGTTCTAAGTACC +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWARSGQK*VIVLST
Trigger: GGTACTTAGAACAATCACCCACTTCTGGCCACTTCG...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGGGAGACAAGGTTTCTaGCATTATGATATGCCACCC +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAGRQGF*HYDMPP
Trigger: GGGTGGCATATCATAATGCCAGAAACCTTGTCTCCC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGACGAGGTCTCCTGCAGTaGAGTTATGGCCACACACTT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGRGLLQ*SYGHTL
Trigger: AAGTGTGTGGCCATAACTTCACTGCAGGAGACCTCG...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGTGCCAGGGGACACTTTaGACTGTTCCCCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMCQGTL*TVPHWL
Trigger: CAGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCA...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCAAAGAGGCAGGATGTaGGGAGCTTGGCAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFQRGRM*GAWQSG
Trigger: CCCGGACTGCCAAGCTCCTCACATCCTGCCTCTTTG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGCACCTGCCACTGATTaGCAGCTCTACCAAGATTGC +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDAPATD*QLYQDC
Trigger: GCAATCTTGGTAGAGCTGTCAATCAGTGGCAGGTGC...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGATTCATTTCCTACCTaGATCCTCCCTTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRDSFPT*ILPSGL
Trigger: CAGGCCAGAAGGGAGGATTCAGGTAGGAAATGAATC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATAGGACCGAGGTCTCCTaGAGTGAAGTTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDRTEVS*SEVMAT
Trigger: TGTGGCCATAACTTCACTGCAGGAGACCTCGGTCCT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAAGGACCGAGGTCTCCTaGAGTGAAGTTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGRTEVS*SEVMAT
Trigger: TGTGGCCATAACTTCACTGCAGGAGACCTCGGTCCT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTAGGTGTAGGCAAAGATaGTCCAGGCTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGRCRQR*SRLLSQ
Trigger: TTGTGACAGCAGCCTGGAGCATCTTTGCCTACACCT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGATAATCATCCCCCTCTaGTTGCCAGCTCGATACCTC +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRIIIPL*LPARYL
Trigger: GAGGTATCGAGCTGGCAAGCAGAGGGGGATGATTAT...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp GCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGATACAGCATTTCTTTATCTGGATaGTTCTGCTTAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AVRGPPSSPPISGLRRYSISLSG*FCLSSF
Trigger: GAAGGAACTTAAGCAGAAGCATCCAGATAAAGAAAT...GCTGTATCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGACTTTCAGGCCAATGGTaGAGCCAAAGTGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGLSGQW*SQSGKP
Trigger: TGGCTTCCCACTTTGGCTGCACCATTGGCCTGAAAG...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATCAACCTGGAGAGAGTaGAGCCCTTCTAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGSTWRE*SPSRLS
Trigger: GCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGCTTCTTCATCATCTTaGTCCCTCTCATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGASSSS*SLSSTS
Trigger: GGAGGTGGATGAGAGGGACCAAGATGATGAAGAAGC...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGCTTCTTCATCATCTTaGTCCCTCTCATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRASSSS*SLSSTS
Trigger: GGAGGTGGATGAGAGGGACCAAGATGATGAAGAAGC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGTAATACCAGCACTTTaGGAAGCCAGGGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMVIPAL*EARAGG
Trigger: TCCGCCTGCCCTGGCTTCCCAAAGTGCTGGTATTAC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGACTGCTAGGTGGATGTaGGTCAATCCAAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMTARWM*VNPRGG
Trigger: CCCGCCTCTTGGATTGACCCACATCCACCTAGCAGT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp ACTGAGCTGCAAAGATGGCCCTGCCTCCATGCCTTGTaGAACATGATGATGCCCCTGGGAATGGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TELQRWPCLHAL*NMMMPLGMGGD
Trigger: ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTGCAGCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
3UTR CAA 72 bp CTGCTAGGTGGATGTGGGTCAATCCAAGAGGCGGGATaGGTGCAAGAAGTTGAGGAAGACGAGATGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LLGGCGSIQEAG*VQEVEEDEMSV
Trigger: CACGCTCATCTCGTCTTCCTCAACTTCTTGCACCAATCCCGCCTCTTGGATTGACCCACATCCACCTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGGATGTTCTCTAGCATaGACCTTCCTGAAGACAGGT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRGCSLA*TFLKTG
Trigger: ACCTGTCTTCAGGAAGGTTCATGCTAGAGAACATCC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403092.5
CDS-3UTR TCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTAAATGTGTCTGGCACTaGTGTTCCAAGTGCGACGAA +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGKCVWH*CSKCDE
Trigger: TTCGTCGCACTTGGAACATCAGTGCCAGACACATTT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGCCGCATGTTGTACATaGCACTTCCAACTGTCACAA +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRAACCT*HFQLSQ
Trigger: TTGTGACAGTTGGAAGTGTCATGTACAACATGCGGC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403092.5
ENST00000406785.6
CDS-3UTR TCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGCAGTGGTTGGGCGCTaGTGTGTTAATGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGAVVGR*CVNESH
Trigger: ATGGGATTCATTAACACATCAGCGCCCAACCACTGC...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGCAGCTGCAGGAAGTCTaGATTCTGAGAGTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRQLQEV*ILRVGC
Trigger: ACAACCAACTCTCAGAATTCAGACTTCCTGCAGCTG...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGAGGACCGAGGTCTCCTaGAGTGAAGTTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMRTEVS*SEVMAT
Trigger: TGTGGCCATAACTTCACTGCAGGAGACCTCGGTCCT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGATCAGACCCAGCATTTaGTGTGCCATCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRIRPSI*CAILCS
Trigger: AGAACAGAGGATGGCACAGCAAATGCTGGGTCTGAT...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTACTTCCAACTTGGTGTaGTCTCCCAGGATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFTSNLV*SPRMGR
Trigger: GCGCCCCATCCTGGGAGAGCACACCAAGTTGGAAGT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGACTGGAAGAAGGACCTTaGCAATCACAGTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGLEEGP*QSQSRA
Trigger: AGCTCTGGACTGTGATTGGCAAGGTCCTTCTTCCAG...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATGGTCCCACCTACTTTaGCTAGTTCCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGWSHLL*LVPDHI
Trigger: GATGTGGTCAGGAACTAGGCAAAGTAGGTGGGACCA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCCAAAAGAAGGGTCTTaGGGTTCCCAAATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGPKEGS*GSQMGK
Trigger: TTTGCCCATTTGGGAACCCCAAGACCCTTCTTTTGG...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCCCTGCAGTGAAGTTATaGCCACACACTTCAATTACT +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAPAVKL*PHTSIT
Trigger: AGTAATTGAAGTGTGTGGCCATAACTTCACTGCAGG...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAACAGCCTTCCTTGCTTaGTCAGCTGCATGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGTAFLA*SAACLF
Trigger: AAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGACCTCTTCCTCTTTGCTaGTCAGTGGCTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGPLPLC*SVAACH
Trigger: ATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGG...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTGTGCTCTCCCAGGATaGGGCGCCCCATTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFCALPG*GAPFLQ
Trigger: TTGCAGAAATGGGGCGCCCCATCCTGGGAGAGCACA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCTCACCTCCGATTTCTaGCCTCCGCCGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLTSDF*PPPIQQ
Trigger: CTGCTGTATCGGCGGAGGCCAGAAATCGGAGGTGAG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGGCCTCCAGGGAGGAGAAGAAAATGTACAAGAGCCATAGGAGCACAAAGAGGCACTGAGCTGCAAAGATaGCCCTGCCTCCATGCCTTG +
Preference number: 4 (lower is better)
Translates to: RPPGRRRKCTRAIGAQRGTELQR*PCLHAL
Trigger: CAAGGCATGGAGGCAGGGCCATCTTTGCAGCTCAGT...GCCTCTTTGTGCTCCTATGGCTCTTGTACATTTTCTTCTCCTCCCTGGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGCCTTGTGGTTCATTTaGGCCAGACTCAAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGALWFI*ARLKLS
Trigger: ACTGAGCTTGAGTCTGGCCCAAATGAACCACAAGGC...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGCTGTTAGCAGGATCTTaGAGGGAAAATGCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRLLAGS*RENARD
Trigger: GTCCCTAGCATTTTCCCTCCAAGATCCTGCTAACAG...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCTGATGTTGAGTCGTaGAGGCTTCAAGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRSDVES*RLQALK
Trigger: CTTCAGAGCTTGAAGCCTCCACGACTCAACATCAGA...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATCCAAGAGGCGGGATTaGTGCAAGAAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGSKRRD*CKKLRK
Trigger: CTTCCTCAACTTCTTGCACCAATCCCGCCTCTTGGA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGCCATCCTCTGTTCTaGAGTCAACAAACACAGTGT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRCHPLF*SQQTQC
Trigger: ACACTGTGTTTGTTGACTTCAGAACAGAGGATGGCA...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTATACTTTCACCTCCATaGTGCCAATGCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGILSPP*CQCSHS
Trigger: TGAGTGAGAGCATTGGCATCATGGAGGTGAAAGTAT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTGCCAGGGGACACTTTaGACTGTTCCCCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFCQGTL*TVPHWL
Trigger: CAGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATAACATCAAGAGAGTCTaGCAAAAGCTCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDNIKRV*QKLCPP
Trigger: AGGAGGGCAGAGCTTTTGTCAGACTCTCTTGATGTT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGCTTGGTCAGCTGCATaGCTCTTTAAAATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRAWSAA*LFKMLP
Trigger: TGGCAACATTTTAAAGAGGCATGCAGCTGACCAAGC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATGCGACGAACACGACTaGAGTCACAGAATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGCDEHD*SHRIFQ
Trigger: CTGAAAGATTCTGTGACTGCAGTCGTGTTCGTCGCA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTGGGTGGCTGCCACTTTaGTGGCAAATGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFGWLPL*WQMCLA
Trigger: TGCCAGACACATTTGCCAGCAAAGTGGCAGCCACCC...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTCTGGTCCTGGGTGGCTaGCACTTTGCTGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAALVLGG*HFAGKC
Trigger: ACATTTGCCAGCAAAGTGGCAGCCACCCAGGACCAG...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATATGGCCCTGCCTCCATaGCTTGTTGAACATGATGAT +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDMALPP*LVEHDD
Trigger: ATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCACAGGGGAAAGGCATaGATCAGAATTTTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDHRGKA*IRIFAG
Trigger: CCCTGCAAAAATTCTGATGCATGCCTTTCCCCTGTG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTAACCTGCCTGCTCAGTaGTATGTTTGGAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGNLPAQ*YVWREN
Trigger: ATTTTCCCTCCAAACATAGCACTGAGCAGGCAGGTT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCATGGGCTTGACAAGTaGATTGGTGACCCAATATGG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDHGLDK*IGDPIW
Trigger: CCATATTGGGTCACCAATGCACTTGTCAAGCCCATG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTGTGTGTGTCTGTGCGTaGACTCGAACGGCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAVCVCA*TRTASR
Trigger: ACGACTTGCCGTTCGAGTGCACGCACAGACACACAC...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCACAGTTGTCTTGGTaGTCTCTCCATTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRSQLSW*SLHWVS
Trigger: AGAAACCCAATGGAGAGACCACCAAGACAACTGTGA...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATCCTCACAGTTGTCTTaGTGGTCTCTCCATTGGGTT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGSSQLS*WSLHWV
Trigger: AACCCAATGGAGAGACCACCAAGACAACTGTGAGGA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGCCTGCAGTGAAGTTATaGCCACACACTTCAATTACT +
Preference number: 4 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLPAVKL*PHTSIT
Trigger: AGTAATTGAAGTGTGTGGCCATAACTTCACTGCAGG...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGACAGCCTTCCTTGCTTaGTCAGCTGCATGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMTAFLA*SAACLF
Trigger: AAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGLFAGQ*LLVIIF
Trigger: GAATATGATGACAAGCAGCCACTGACCAGCAAAGAG...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATAATCTTTCAGGCCAATaGTGCAGCCAAAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDNLSGQ*CSQSGK
Trigger: CTTCCCACTTTGGCTGCACCATTGGCCTGAAAGATT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCATACTGGTCCTGGGTaGCTGCCACTTTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFHTGPG*LPLCWQ
Trigger: TTGCCAGCAAAGTGGCAGCCACCCAGGACCAGTATG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTCTGCATACTGGTCCTaGGTGGCTGCCACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFSAYWS*VAATLL
Trigger: CAGCAAAGTGGCAGCCACCCAGGACCAGTATGCAGA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGAGGCGTCTGCATACTaGTCCTGGGTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQEASAY*SWVAAT
Trigger: AGTGGCAGCCACCCAGGACCAGTATGCAGACGCCTC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTGGTAGATGGCAGCGATaGACCAGGCCACACCGATTC +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASGRWQR*TRPHRF
Trigger: GAATCGGTGTGGCCTGGTCCATCGCTGCCATCTACC...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTGGCTGCGTGGTAGATaGCAGCGATGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQWLRGR*QRWTRP
Trigger: TGGCCTGGTCCATCGCTGCCATCTACCACGCAGCCA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTTTTATGCTTCTTCTTaGAGGCAGCTTCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGFYASS*RQLHLH
Trigger: GTGGAGGTGAAGCTGCCTCCAAGAAGAAGCATAAAA...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTTACATGTGTGTCTCTaGGCTGTATGCTGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGLHVCL*AVCCSK
Trigger: CTTGCTACAGCATACAGCCCAGAGACACACATGTAA...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTGTTCAACTGCTAGGTaGATGTGGGTCAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGCSTAR*MWVNPR
Trigger: TCTTGGATTGACCCACATCCACCTAGCAGTTGAACA...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCCTGAATTCTGAGAGTTaGTTGTACATAACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWALNSES*LYITSG
Trigger: TCCTGAGGTTATGTACAACCAACTCTCAGAATTCAG...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCGAGGTCTCCTGCAGTaGAGTTATGGCCACACACTT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFRGLLQ*SYGHTL
Trigger: AAGTGTGTGGCCATAACTTCACTGCAGGAGACCTCG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCAGTTCTCCAGACACTaGTATGTCCCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDQFSRH*YVPCSK
Trigger: CTTTGAACAAGGGACATATCAGTGTCTGGAGAACTG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGCAGTATGCCATCTTCTaGAGCTTCAGAAGATACTTT +
Preference number: 4 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLQYAIF*SFRRYF
Trigger: AAAGTATCTTCTGAAGCTTCAGAAGATGGCATACTG...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAATGCTCTCACTCACATaGGTCACAGGTTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGMLSLT*VTGSSK
Trigger: TTTTGAGGAACCTGTGACTCATGTGAGTGAGAGCAT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTCCAAGTGCGACGAACACGACTGCAGTCACAGAATCTTTCAGGCCAATGGTGCAAGCCAGGTCTCCAATaGAAGCTGTCAGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: FQVRRTRLQSQNLSGQWCKPGLQ*KLSVGQ
Trigger: TTGGCCTACTGACAGCTTTCATTGGAGACCTGGCTT...GCACCATTGGCCTGAAAGATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGGCAGCCCTTCTAGACTaGGCTGCAAAGATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGAALLD*AAKMAL
Trigger: CAGGGCCATCTTTGCAGCTCAGTCTAGAAGGGCTGC...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTAGGTGGAGCTTGCAGTaGGCCGAGATCCCGCCACTG +
Preference number: 4 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPRWSLQ*AEIPPL
Trigger: CAGTGGCGGGATCTCGGCTCACTGCAAGCTCCACCT...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGGTGAAAAATTAAGTTaGGCAACTGTCGGGACATGT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRGEKLS*ATVGTC
Trigger: ACATGTCCCGACAGTTGCTCAACTTAATTTTTCACC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTTCATAGATCTGGGCTaGAGTCTCAGGTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFFIDLG*SLRWDW
Trigger: CCAGTCCCACCTGAGACTTCAGCCCAGATCTATGAA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTAGCAGAGTTACTTTCTaGCTCTCTGCTTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGSRVTF*LSAFSS
Trigger: AGAACTGAAAGCAGAGAGTCAGAAAGTAACTCTGCT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGCTAGCATTATGCAGTTaGTCCAAGTCATTGTACCTC +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRLALCS*SKSLYL
Trigger: GAGGTACAATGACTTGGATCAACTGCATAATGCTAG...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAGGACCGAGGTCTCCTaGAGTGAAGTTATGGCCACA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFRTEVS*SEVMAT
Trigger: TGTGGCCATAACTTCACTGCAGGAGACCTCGGTCCT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGATCAGACCCAGCATTTaGTGTGCCATCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMIRPSI*CAILCS
Trigger: AGAACAGAGGATGGCACAGCAAATGCTGGGTCTGAT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTTGCTGGTCAGTGGCTaGTTGTCATCATATTCGTCT +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDLLVSG*LSSYSS
Trigger: AGACGAATATGATGACAAGCAGCCACTGACCAGCAA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGACTTCCAACTTGGTGTaGTCTCCCAGGATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQTSNLV*SPRMGR
Trigger: GCGCCCCATCCTGGGAGAGCACACCAAGTTGGAAGT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCTTTCAGGCCAATGGTaGAGCCAAAGTGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLSGQW*SQSGKP
Trigger: TGGCTTCCCACTTTGGCTGCACCATTGGCCTGAAAG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGTGCGACGAACACGACTaGAGTCACAGAATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMCDEHD*SHRIFQ
Trigger: CTGAAAGATTCTGTGACTGCAGTCGTGTTCGTCGCA...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGACCTATGGAGGCGTCTaGATACTGGTCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQTYGGV*ILVLGG
Trigger: GCCACCCAGGACCAGTATGCAGACGCCTCCATAGGT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCTGCAAAGATGGCCCTaGCTCCATGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLQRWP*LHALLN
Trigger: GTTCAACAAGGCATGGAGGCAGGGCCATCTTTGCAG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCATGTCCAATCAACATTaGCAAATGGGAGAACAGTAT +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAMSNQH*QMGEQY
Trigger: ATACTGTTCTCCCATTTGGCAATGTTGATTGGACAT...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTTGTCTCTGGGCTGTATaGTGTAGCAAGAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAACLWAV*CSKRGD
Trigger: GTCCCCTCTCTTGCTACAGCATACAGCCCAGAGACA...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGCTAGTTCCTTTCTTTaGCCTTGTCCAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGASSFL*PCPGSY
Trigger: GTAACTTCCTGGACAAGGGCAAAGAAAGGAACTAGC...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTCCTCCCTTCTGGCCTaGCCCTCTGAGAACACTCCA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQSSLLA*PSENTP
Trigger: TGGAGTGTTCTCAGAGGGGCAGGCCAGAAGGGAGGA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTATCCCATTGAAAAGGTaGGTGAAAGACTTAATCGCC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGIPLKR*VKDLIA
Trigger: GGCGATTAAGTCTTTCACCCACCTTTTCAATGGGAT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCCTGCAGTGAAGTTATaGCCACACACTTCAATTACT +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGPAVKL*PHTSIT
Trigger: AGTAATTGAAGTGTGTGGCCATAACTTCACTGCAGG...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCCTCCCCTCCACCTCTaGCAGTCCCTTCGATGGTTT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQPPLHL*QSLRWF
Trigger: AAACCATCGAAGGGACTGCCAGAGGTGGAGGGGAGG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTGTGCTCTCCCAGGATaGGGCGCCCCATTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQCALPG*GAPFLQ
Trigger: TTGCAGAAATGGGGCGCCCCATCCTGGGAGAGCACA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACATGTGCTCTCCCAGGATaGGGCGCCCCATTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTCALPG*GAPFLQ
Trigger: TTGCAGAAATGGGGCGCCCCATCCTGGGAGAGCACA...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGGTAGATGGCAGCGATaGACCAGGCCACACCGATTC +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQGRWQR*TRPHRF
Trigger: GAATCGGTGTGGCCTGGTCCATCGCTGCCATCTACC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACACTCACCTCCGATTTCTaGCCTCCGCCGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTLTSDF*PPPIQQ
Trigger: CTGCTGTATCGGCGGAGGCCAGAAATCGGAGGTGAG...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTGTTTGCATAGGGGATaGCAGGTGGACAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFCLHRG*QVDRRN
Trigger: GTTCCTCCTGTCCACCTGCCATCCCCTATGCAAACA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGTCTCTGAAAATCTCTaGGCAGGATTCTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMVSENL*AGFFLA
Trigger: CGCCAAGAAGAATCCTGCCCAGAGATTTTCAGAGAC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTATGTGTGGTGGGACTaGGTGGGCCTCCTACTCCTC +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGYVWWD*VGLLLL
Trigger: GAGGAGTAGGAGGCCCACCCAGTCCCACCACACATA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTGGCAGAGGACCCATGTaGTCAAAGATGTCCCGGTAT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAGRGPM*SKMSRY
Trigger: ATACCGGGACATCTTTGACCACATGGGTCCTCTGCC...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGCAAGTGTAGAAACATaGTTGGCTTCCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMASVET*LASSMP
Trigger: TGGCATACTGGAAGCCAATCATGTTTCTACACTTGC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGATGCTCTCACTCACATaGGTCACAGGTTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMMLSLT*VTGSSK
Trigger: TTTTGAGGAACCTGTGACTCATGTGAGTGAGAGCAT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTGCCAGGGGACACTTTaGACTGTTCCCCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQCQGTL*TVPHWL
Trigger: CAGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTTGGAAAGGGTGGCTCTaGAAGCCTAGGCACATCCAA +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASWKGWL*KPRHIQ
Trigger: TTGGATGTGCCTAGGCTTTCAGAGCCACCCTTTCCA...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATACATTTGGACATCTTaGCAGGCAGGGAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGYIWTS*QAGKKS
Trigger: TGACTTTTTCCCTGCCTGTCAAGATGTCCAAATGTA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGATACAGAAATGCAGCTaGAGTTTACAGAGATCACCT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRIQKCS*SLQRSP
Trigger: AGGTGATCTCTGTAAACTTCAGCTGCATTTCTGTAT...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATAGGCTCCTCATTGTTTaGAATAGTCTGAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDRLLIV*NSLSET
Trigger: GGTTTCACTCAGACTATTTCAAACAATGAGGAGCCT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCAAGATTTCAAGGCTTaGGCCAATACAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDQDFKA*ANTETM
Trigger: CATGGTTTCTGTATTGGCTCAAGCCTTGAAATCTTG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTGTGCTTGCTCGGTATaGGTTCAGTTTACTATCAAA +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGCACSV*VQFTIK
Trigger: TTTGATAGTAAACTGAACTCATACCGAGCAAGCACA...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGATCACTGAAACACACTaGAAGAATGTGCTGGAATCT +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRITETH*KNVLES
Trigger: AGATTCCAGCACATTCTTTCAGTGTGTTTCAGTGAT...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATGGCTGAGTGTACATTaGATCACAGAGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGWLSVH*ITESTK
Trigger: CTTTGTTGACTCTGTGATTCAATGTACACTCAGCCA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAGGTGTAGGCAAAGATaGTCCAGGCTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFRCRQR*SRLLSQ
Trigger: TTGTGACAGCAGCCTGGAGCATCTTTGCCTACACCT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTATAATCATCCCCCTCTaGTTGCCAGCTCGATACCTC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFIIIPL*LPARYL
Trigger: GAGGTATCGAGCTGGCAAGCAGAGGGGGATGATTAT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTCAGTGTTGACCTCGTaGATGCTGACAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFSVLTS*MLTAFL
Trigger: AAGGAAGGCTGTCAGCATGCACGAGGTCAACACTGA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGGCCTCCAGGGAGGAGAAGAAAATGTACAAGAGCCATAGGAGCACAAAGAGGCTGCGACGAACACGACTaGAGTCACAGAATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RPPGRRRKCTRAIGAQRGCDEHD*SHRIFQ
Trigger: CTGAAAGATTCTGTGACTGCAGTCGTGTTCGTCGCA...GCCTCTTTGTGCTCCTATGGCTCTTGTACATTTTCTTCTCCTCCCTGGAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGGGTGGCTGCCACTTTaGTGGCAAATGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQGWLPL*WQMCLA
Trigger: TGCCAGACACATTTGCCAGCAAAGTGGCAGCCACCC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGGGTGGCTGCCACTTTaGTGGCAAATGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDGWLPL*WQMCLA
Trigger: TGCCAGACACATTTGCCAGCAAAGTGGCAGCCACCC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTGGTCCTGGGTGGCTaGCACTTTGCTGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLVLGG*HFAGKC
Trigger: ACATTTGCCAGCAAAGTGGCAGCCACCCAGGACCAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTGTTCCCCATTGGCTaGGTGGTAGATGGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLFPIG*VVDGSD
Trigger: ATCGCTGCCATCTACCACGCAGCCAATGGGGAACAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCACTTAGCTGGGCTGAATaGTGGAAGAAGGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSLSWAE*WKKDLA
Trigger: GGCAAGGTCCTTCTTCCAGCATTCAGCCCAGCTAAG...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGTTATTCTTACTGTTTaGATAGGGGATGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMVILTV*IGDGRW
Trigger: CCACCTGCCATCCCCTATGCAAACAGTAAGAATAAC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTAAAAAGAGAACATTaGATGACCGAAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRLKREH*MTEGLT
Trigger: CGTCAACCCTTCGGTCATGCAATGTTCTCTTTTTAA...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAAAATACCTTGTCAGTTaGTTTAAAGGGACCCAGACC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGKYLVS*FKGTQT
Trigger: GGTCTGGGTCCCTTTAAAGCAACTGACAAGGTATTT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCATGTCTACATTCTTTTaGTATGTTTCGTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAMSTFF*YVSSVV
Trigger: CACAACAGACGAAACATAGCAAAAGAATGTAGACAT...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAATCCCATTGAAAAGGTaGGTGAAAGACTTAATCGCC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGIPLKR*VKDLIA
Trigger: GGCGATTAAGTCTTTCACCCACCTTTTCAATGGGAT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTGCTTCTTCATCATCTTaGTCCCTCTCATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFASSSS*SLSSTS
Trigger: GGAGGTGGATGAGAGGGACCAAGATGATGAAGAAGC...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTACAGCCTTCCTTGCTTaGTCAGCTGCATGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFTAFLA*SAACLF
Trigger: AAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATACTCTGATTTCCTTCTaGGTATCACCAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDTLISF*VSPGLN
Trigger: GTTTAAGCCTGGTGATACCCAGAAGGAAATCAGAGT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATTCCTGAAGACAGGTTaGCCAAACAGGTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGFLKTG*PNRYFP
Trigger: AGGAAAATACCTGTTTGGCCAACCTGTCTTCAGGAA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403092.5
CDS-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTCCTCTTCCTCTTTGCTaGTCAGTGGCTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAPLPLC*SVAACH
Trigger: ATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGG...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTCTGCATACTGGTCCTaGGTGGCTGCCACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQSAYWS*VAATLL
Trigger: CAGCAAAGTGGCAGCCACCCAGGACCAGTATGCAGA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAAACCATCGGATTTCCTaGCTCCATTCCACTTTTATG +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGNHRIS*LHSTFM
Trigger: CATAAAAGTGGAATGGAGCCAGGAAATCCGATGGTT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGCTTTCTCAGTGATCTaGATCACCAACATGATTGCC +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMAFSVI*ITNMIA
Trigger: GGCAATCATGTTGGTGATCCAGATCACTGAGAAAGC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGCAGGATTCTTCTTaGCGAATAAGCAATCTTAGT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGGQDSS*RISNLS
Trigger: ACTAAGATTGCTTATTCGCCAAGAAGAATCCTGCCC...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTATTGGTGACCCAATATaGGCAGCAGCTGGCTCACAA +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAIGDPI*AAAGSQ
Trigger: TTGTGAGCCAGCTGCTGCCCATATTGGGTCACCAAT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp CGCCTCTCCTCTTCCTCTTTGCTGGTCAGTGGCTGCTaGTCATCATATTCGTCTGTTATTGTGAAGCCACCT +
Preference number: 4 (lower is better)
Translates to: RLSSSSLLVSGC*SSYSSVIVKPP
Trigger: AGGTGGCTTCACAATAACAGACGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGGAGAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTACAGTAACTAACAGATaGAATCCCATTGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGTVTNR*NPIEKV
Trigger: CACCTTTTCAATGGGATTTCATCTGTTAGTTACTGT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATTTCAACATGAGAATTaGCCACTTTCCCGTCCATTT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGFQHEN*PLSRPF
Trigger: AAATGGACGGGAAAGTGGTCAATTCTCATGTTGAAA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTTTCAACATGAGAATTaGCCACTTTCCCGTCCATTT +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDFQHEN*PLSRPF
Trigger: AAATGGACGGGAAAGTGGTCAATTCTCATGTTGAAA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AGGCCTCCAGGGAGGAGAAGAAAATGTACAAGAGCCATAGGAGCACAAAGAGGCGCAAGTGTAGAAACATaGTTGGCTTCCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: RPPGRRRKCTRAIGAQRGASVET*LASSMP
Trigger: TGGCATACTGGAAGCCAATCATGTTTCTACACTTGC...GCCTCTTTGTGCTCCTATGGCTCTTGTACATTTTCTTCTCCTCCCTGGAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTGCCGCATGTTGTACATaGCACTTCCAACTGTCACAA +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAAACCT*HFQLSQ
Trigger: TTGTGACAGTTGGAAGTGTCATGTACAACATGCGGC...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATATGGCCAAACGTTCTTaGGATTATGAAACTACACTC +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDMAKRS*DYETTL
Trigger: GAGTGTAGTTTCATAATCTCAAGAACGTTTGGCCAT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGGACCGCCCAGCATTTTaGAATGTACTGCGTGATGGG +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGDRPAF*NVLRDG
Trigger: CCCATCACGCAGTACATTTCAAAATGCTGGGCGGTC...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCTGGTAATTCAGTGGTaGTGTGATTATGACATTAAC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGLVIQW*CDYDIN
Trigger: GTTAATGTCATAATCACATCACCACTGAATTACCAG...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAGACAAGGGGCTGAGCTaGGGTTGTGGTATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIDKGLS*GCGMAP
Trigger: TGGGGCCATACCACAACCTCAGCTCAGCCCCTTGTC...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGCTGTGGCCGACCGGTTaGTTGCTAAGGGTGAGATTT +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGLWPTG*LLRVRF
Trigger: AAATCTCACCCTTAGCAATCAACCGGTCGGCCACAG...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCATTGAGGAAGACGAGATaGGCGTGTGTGAATGAGCAG +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSLRKTR*ACVNEQ
Trigger: CTGCTCATTCACACACGCTCATCTCGTCTTCCTCAA...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTTCAGTGTTGACCTCGTaGATGCTGACAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASSVLTS*MLTAFL
Trigger: AAGGAAGGCTGTCAGCATGCACGAGGTCAACACTGA...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTATCAGACCCAGCATTTaGTGTGCCATCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFIRPSI*CAILCS
Trigger: AGAACAGAGGATGGCACAGCAAATGCTGGGTCTGAT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TTCCAAGTGCGACGAACACGACTGCAGTCACAGAATCTTTCAGGCCAATGGTGCTTGCTGGTCAGTGGCTaGTTGTCATCATATTCGTCT +
Preference number: 4 (lower is better)
Translates to: FQVRRTRLQSQNLSGQWCLLVSG*LSSYSS
Trigger: AGACGAATATGATGACAAGCAGCCACTGACCAGCAA...GCACCATTGGCCTGAAAGATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTTTCAGGCCAATGGTaGAGCCAAAGTGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLSGQW*SQSGKP
Trigger: TGGCTTCCCACTTTGGCTGCACCATTGGCCTGAAAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTGCGACGAACACGACTaGAGTCACAGAATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFCDEHD*SHRIFQ
Trigger: CTGAAAGATTCTGTGACTGCAGTCGTGTTCGTCGCA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTATGGCCCTGCCTCCATaGCTTGTTGAACATGATGAT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFMALPP*LVEHDD
Trigger: ATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTCAACCTGGAGAGAGTaGAGCCCTTCTAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDSTWRE*SPSRLS
Trigger: GCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTGTGGGCTGGAAACCTaGAGTGCTTTCCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDCGLET*SAFLWE
Trigger: CTCCCAAAGGAAAGCACTGCAGGTTTCCAGCCCACA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTAAGCTCTTTCCCTATTaGCGGGAGGTAATAGTGAGC +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAKLFPY*REVIVS
Trigger: GCTCACTATTACCTCCCGGCAATAGGGAAAGAGCTT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGCATGGGAACCTGCCTaGTCAGTGCTATGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDAWEPA*SVLCLE
Trigger: CTCCAAACATAGCACTGAGCAGGCAGGTTCCCATGC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGTGATAGGTTTCCCCTaGTTAGCTGCTTATTTGATT +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDVIGFP*LAAYLI
Trigger: AATCAAATAAGCAGCTAAGCAGGGGAAACCTATCAC...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCAGCTCTACCAAGATTaGTTAAGGCAGACATCCGCT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFQLYQD*LRQTSA
Trigger: AGCGGATGTCTGCCTTAAGCAATCTTGGTAGAGCTG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTAAGAGGCGGGATTGGTaGAAGAAGTTGAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASKRRDW*KKLRKT
Trigger: CGTCTTCCTCAACTTCTTGCACCAATCCCGCCTCTT...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGATCCCATTGAAAAGGTaGGTGAAAGACTTAATCGCC +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMIPLKR*VKDLIA
Trigger: GGCGATTAAGTCTTTCACCCACCTTTTCAATGGGAT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTCCTCACAGTTGTCTTaGTGGTCTCTCCATTGGGTT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFSSQLS*WSLHWV
Trigger: AACCCAATGGAGAGACCACCAAGACAACTGTGAGGA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAGCTTCTTCATCATCTTaGTCCCTCTCATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSASSSS*SLSSTS
Trigger: GGAGGTGGATGAGAGGGACCAAGATGATGAAGAAGC...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGAAACCCATTTACATTTaGATGGTTTCACTTTCCACA +
Preference number: 4 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLKPIYI*MVSLST
Trigger: TGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTT...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTAACAAAGATAAAAGATaGGATACACTGGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGNKDKR*DTLGFL
Trigger: GAGAAAGCCCAGTGTATCCCATCTTTTATCTTTGTT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGAACTTACACAGGTCTTaGCTCATGGTAATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMNLHRS*LMVISG
Trigger: TCCAGAGATTACCATGAGCCAAGACCTGTGTAAGTT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTGTATACATCATCTGTaGTTTTCAAGCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGCIHHL*FSSFLS
Trigger: GCTCAAGAAGCTTGAAAACCACAGATGATGTATACA...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGTTTCAACATGAGAATTaGCCACTTTCCCGTCCATTT +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMFQHEN*PLSRPF
Trigger: AAATGGACGGGAAAGTGGTCAATTCTCATGTTGAAA...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp ATGTGTCTGGCACTGATGTTCCAAGTGCGACGAACACGACTGCAGTCACAGAATCAGTTCTCCAGACACTaGTATGTCCCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: MCLALMFQVRRTRLQSQNQFSRH*YVPCSK
Trigger: CTTTGAACAAGGGACATATCAGTGTCTGGAGAACTG...ATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAACATCAGTGCCAGACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTATACTTTCACCTCCATaGTGCCAATGCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFILSPP*CQCSHS
Trigger: TGAGTGAGAGCATTGGCATCATGGAGGTGAAAGTAT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAAGCCAGGTCTCCAATaGAAGCTGTCAGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQKPGLQ*KLSVGQ
Trigger: TTGGCCTACTGACAGCTTTCATTGGAGACCTGGCTT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGCTGGTTTGGGGAGTGTaGATGGATTCTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGLVWGV*MDSSSV
Trigger: AACGGAGGAAGAATCCATTCACACTCCCCAAACCAG...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATACTTTGGTAATACGATaGAGACATGCTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDTLVIR*RHASFF
Trigger: GAAGAAAGAAGCATGTCTTCATCGTATTACCAAAGT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTGCAAATGTTCAGTCATaGCTGGAACAGGATTGTGCA +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAANVQS*LEQDCA
Trigger: TGCACAATCCTGTTCCAGTCATGACTGAACATTTGC...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAATGTACAGTTGTTTCTaGAGAATGTGTCTAGGGATT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGMYSCF*RMCLGI
Trigger: AATCCCTAGACACATTCTTCAGAAACAACTGTACAT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTCTCTTGTCACCTAGGTaGTATTTTCTCTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAALLSPR*YFLSHL
Trigger: GAGGTGAGAGAGAAAATATCACCTAGGTGACAAGAG...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAGGTGTAGGCAAAGATaGTCCAGGCTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQRCRQR*SRLLSQ
Trigger: TTGTGACAGCAGCCTGGAGCATCTTTGCCTACACCT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATATAATCATCCCCCTCTaGTTGCCAGCTCGATACCTC +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDIIIPL*LPARYL
Trigger: GAGGTATCGAGCTGGCAAGCAGAGGGGGATGATTAT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTGCTTGGTCAGCTGCATaGCTCTTTAAAATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFAWSAA*LFKMLP
Trigger: TGGCAACATTTTAAAGAGGCATGCAGCTGACCAAGC...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACATCAGTGTTGACCTCGTaGATGCTGACAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTSVLTS*MLTAFL
Trigger: AAGGAAGGCTGTCAGCATGCACGAGGTCAACACTGA...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATTGACATTGCTGAGATaGACAAGGAAATTTTCATCC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGLTLLR*TRKFSS
Trigger: GGATGAAAATTTCCTTGTGCATCTCAGCAATGTCAA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTTGCTGGTCAGTGGCTaGTTGTCATCATATTCGTCT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLLVSG*LSSYSS
Trigger: AGACGAATATGATGACAAGCAGCCACTGACCAGCAA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTCTGTTCCCCATTGGCTaGGTGGTAGATGGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSLFPIG*VVDGSD
Trigger: ATCGCTGCCATCTACCACGCAGCCAATGGGGAACAG...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTCCTTCTAGACTGAGCTaGAAAGATGGCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPPSRLS*KDGPAS
Trigger: GGAGGCAGGGCCATCTTTGCAGCTCAGTCTAGAAGG...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTGGCCTCCTACTCCTCTaGTCCCAGCACACCAAAACA +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSGLLLL*SQHTKT
Trigger: TGTTTTGGTGTGCTGGGAGCAGAGGAGTAGGAGGCC...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGGGACTGGATAATTTaGATGTCTAACAAATTTCCA +
Preference number: 4 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRWDWII*MSNKFP
Trigger: TGGAAATTTGTTAGACATGCAAATTATCCAGTCCCA...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTGGTGGTCTCTCCATTaGGTTTCTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDWWSLH*VSLWLF
Trigger: AAATAACCATAAAGAAACCCAATGGAGAGACCACCA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTTCACAGTTGTCTTGGTaGTCTCTCCATTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAASQLSW*SLHWVS
Trigger: AGAAACCCAATGGAGAGACCACCAAGACAACTGTGA...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATACAGCCTTCCTTGCTTaGTCAGCTGCATGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDTAFLA*SAACLF
Trigger: AAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTTCGATGGTTTTATATaGAACGATAACATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGFDGFI*NDNISS
Trigger: CGAGGAAATGTTATCGTTCCATATAAAACCATCGAA...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLFAGQ*LLVIIF
Trigger: GAATATGATGACAAGCAGCCACTGACCAGCAAAGAG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCCTCTTCCTCTTTGCTaGTCAGTGGCTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQPLPLC*SVAACH
Trigger: ATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGTGGCTGCGTGGTAGATaGCAGCGATGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLWLRGR*QRWTRP
Trigger: TGGCCTGGTCCATCGCTGCCATCTACCACGCAGCCA...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTACTGAGCTGCAAAGATaGCCCTGCCTCCATGCCTTG +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSTELQR*PCLHAL
Trigger: CAAGGCATGGAGGCAGGGCCATCTTTGCAGCTCAGT...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTAAGGATTTATCAACCTaGAGAGAGTGCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAKDLST*RECSPS
Trigger: AGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTCCAGTCCAATCCTCCTaGGAGGTACTAGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAPVQSS*EVLVLF
Trigger: AAATAAGACTAGTACCTCCCAGGAGGATTGGACTGG...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGTTTTACCAACTGCCTTaGCCAAGTGAAGTGATTACA +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMFYQLP*PSEVIT
Trigger: TGTAATCACTTCACTTGGCCAAGGCAGTTGGTAAAA...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAAAAGGCTAGGTCGATaGGCAGCACTGAAGCATAAT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFKRLGR*AALKHN
Trigger: ATTATGCTTCAGTGCTGCCCATCGACCTAGCCTTTT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTACTGATAGATCAGTCTaGGCCTTGTGGTTCATTTGG +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAATDRSV*ALWFIW
Trigger: CCAAATGAACCACAAGGCCCAGACTGATCTATCAGT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGAGATTACATTCATTaGCAGCAAAGAATAGAAACG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDGDYIH*QQRIET
Trigger: CGTTTCTATTCTTTGCTGCCAATGAATGTAATCTCC...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTCAGTTCTCCAGACACTaGTATGTCCCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASQFSRH*YVPCSK
Trigger: CTTTGAACAAGGGACATATCAGTGTCTGGAGAACTG...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTTGCCATCCTCTGTTCTaGAGTCAACAAACACAGTGT +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASCHPLF*SQQTQC
Trigger: ACACTGTGTTTGTTGACTTCAGAACAGAGGATGGCA...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGGATGTTCTCTAGCATaGACCTTCCTGAAGACAGGT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQGCSLA*TFLKTG
Trigger: ACCTGTCTTCAGGAAGGTTCATGCTAGAGAACATCC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403092.5
ENST00000405901.7
CDS-3UTR TCA 90 bp AGGCCTCCAGGGAGGAGAAGAAAATGTACAAGAGCCATAGGAGCACAAAGAGGCCATAGGATTCTTCAATaGTCACTTCCAACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RPPGRRRKCTRAIGAQRGHRILQ*SLPTWC
Trigger: ACACCAAGTTGGAAGTGATCATTGAAGAATCCTATG...GCCTCTTTGTGCTCCTATGGCTCTTGTACATTTTCTTCTCCTCCCTGGAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAAATGTGTCTGGCACTaGTGTTCCAAGTGCGACGAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQKCVWH*CSKCDE
Trigger: TTCGTCGCACTTGGAACATCAGTGCCAGACACATTT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGCCGCATGTTGTACATaGCACTTCCAACTGTCACAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQAACCT*HFQLSQ
Trigger: TTGTGACAGTTGGAAGTGTCATGTACAACATGCGGC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTGAAGTCTCCGAGAGGTaGCCAAAGTCATTCTATTAT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFEVSER*PKSFYY
Trigger: ATAATAGAATGACTTTGGTCACCTCTCGGAGACTTC...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGACGTTTGCAAGAGTTTaGATACTTGGTGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMTFARV*ILGVCF
Trigger: AAAACAGACACCAAGTATTCAAACTCTTGCAAACGT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTGTTTATGGGCTTATaGTCCTGGATGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLFMGL*SWMQER
Trigger: CCTTTCCTGCATCCAGGATCATAAGCCCATAAACAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTGGGATCGACTGATTTaGTGTAATACTCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFWDRLI*CNTLHA
Trigger: AGCATGCAGAGTATTACATCAAATCAGTCGATCCCA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTTATCCGACAAGGGGCTaGGCTGAGGTTGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLYPTRG*AEVVVW
Trigger: CCATACCACAACCTCAGCTCAGCCCCTTGTCGGATA...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTAATAGGGTGTGCAAATaGAGATGTACACAATGGTGG +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAANRVCK*RCTQWW
Trigger: CCACCATTGTGTACATCTTCATTTGCACACCCTATT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCTCTGGCTCATGCCATaGAAGTCAGTAAGATTGATA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLWLMP*KSVRLI
Trigger: TATCAATCTTACTGACTTTCATGGCATGAGCCAGAG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGAAGAAGACACGCAAATaGTTAATCTTCCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMKKTRK*LIFLVS
Trigger: AGAGACAAGGAAGATTAAGCATTTGCGTGTCTTCTT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAATTTCTTTATCTGGATaGTTCTGCTTAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGISLSG*FCLSSF
Trigger: GAAGGAACTTAAGCAGAAGCATCCAGATAAAGAAAT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGATCAGACCCAGCATTTaGTGTGCCATCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGIRPSI*CAILCS
Trigger: AGAACAGAGGATGGCACAGCAAATGCTGGGTCTGAT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCGAAGGGTTGACGTTTaGAAGAGTTTGAATACTTGG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFRRVDV*KSLNTW
Trigger: CCAAGTATTCAAACTCTTGCAAACGTCAACCCTTCG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTACTCAGAACTTGCTCTaGATGCAACTGCCCAAAATC +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASTQNLL*MQLPKI
Trigger: GATTTTGGGCAGTTGCATGCAGAGCAAGTTCTGAGT...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCCAAAAGAAGGGTCTTaGGGTTCCCAAATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQPKEGS*GSQMGK
Trigger: TTTGCCCATTTGGGAACCCCAAGACCCTTCTTTTGG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACATCCTCACAGTTGTCTTaGTGGTCTCTCCATTGGGTT +
Preference number: 4 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTSSQLS*WSLHWV
Trigger: AACCCAATGGAGAGACCACCAAGACAACTGTGAGGA...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCCTGCAGTGAAGTTATaGCCACACACTTCAATTACT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFPAVKL*PHTSIT
Trigger: AGTAATTGAAGTGTGTGGCCATAACTTCACTGCAGG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTACTCTGATTTCCTTCTaGGTATCACCAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFTLISF*VSPGLN
Trigger: GTTTAAGCCTGGTGATACCCAGAAGGAAATCAGAGT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTTCGATGGTTTTATATaGAACGATAACATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDFDGFI*NDNISS
Trigger: CGAGGAAATGTTATCGTTCCATATAAAACCATCGAA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGCCTCCCCTCCACCTCTaGCAGTCCCTTCGATGGTTT +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLPPLHL*QSLRWF
Trigger: AAACCATCGAAGGGACTGCCAGAGGTGGAGGGGAGG...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACAAATCTTTCAGGCCAATaGTGCAGCCAAAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTNLSGQ*CSQSGK
Trigger: CTTCCCACTTTGGCTGCACCATTGGCCTGAAAGATT...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCATACTGGTCCTGGGTaGCTGCCACTTTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLHTGPG*LPLCWQ
Trigger: TTGCCAGCAAAGTGGCAGCCACCCAGGACCAGTATG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTATGTTCAGTCATGACTaGAACAGGATTGTGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASMFSHD*NRIVQA
Trigger: GGCTTGCACAATCCTGTTCCAGTCATGACTGAACAT...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATAGTTGGTTACTTAATTaGACTGTTCTTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDSWLLN*TVLSIW
Trigger: CCAAATGGAAAGAACAGTCCAATTAAGTAACCAACT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGCTCATGGTAATCTCTaGATGTGTGTGTTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDAHGNL*MCVLGL
Trigger: CAGACCCAACACACACATCCAGAGATTACCATGAGC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAAAAAGGTCACTGATTTaGAATCCATTCCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGKRSLI*NPFQSH
Trigger: ATGAGATTGGAATGGATTCCAAATCAGTGACCTTTT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTTGTGAAGGTCAATATTaGATTTCCCCCACCAGACAT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAACEGQY*ISPTRH
Trigger: ATGTCTGGTGGGGGAAATCCAATATTGACCTTCACA...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAGAGGAATGGGACAATaGGGAAAAGAGCCGATGAGA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQRGMGQ*GKEPMR
Trigger: TCTCATCGGCTCTTTTCCCCATTGTCCCATTCCTCT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp AGAAGCCTTCTAACTACTGATAGATCAGTCTGGGCCTaGTGGTTCATTTGGGCCAGACTCAAGCTCAGTATC +
Preference number: 4 (lower is better)
Translates to: RSLLTTDRSVWA*WFIWARLKLSI
Trigger: GATACTGAGCTTGAGTCTGGCCCAAATGAACCACAAGGCCCAGACTGATCTATCAGTAGTTAGAAGGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTTTCAACATGAGAATTaGCCACTTTCCCGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFFQHEN*PLSRPF
Trigger: AAATGGACGGGAAAGTGGTCAATTCTCATGTTGAAA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCAGTTCTCCAGACACTaGTATGTCCCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQQFSRH*YVPCSK
Trigger: CTTTGAACAAGGGACATATCAGTGTCTGGAGAACTG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTGCCATCCTCTGTTCTaGAGTCAACAAACACAGTGT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQCHPLF*SQQTQC
Trigger: ACACTGTGTTTGTTGACTTCAGAACAGAGGATGGCA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCAGTATGCCATCTTCTaGAGCTTCAGAAGATACTTT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFQYAIF*SFRRYF
Trigger: AAAGTATCTTCTGAAGCTTCAGAAGATGGCATACTG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGCAAGTGTAGAAACATaGTTGGCTTCCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQASVET*LASSMP
Trigger: TGGCATACTGGAAGCCAATCATGTTTCTACACTTGC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGCAAGTGTAGAAACATaGTTGGCTTCCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDASVET*LASSMP
Trigger: TGGCATACTGGAAGCCAATCATGTTTCTACACTTGC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGATGCTCTCACTCACATaGGTCACAGGTTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQMLSLT*VTGSSK
Trigger: TTTTGAGGAACCTGTGACTCATGTGAGTGAGAGCAT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACAATGCTCTCACTCACATaGGTCACAGGTTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTMLSLT*VTGSSK
Trigger: TTTTGAGGAACCTGTGACTCATGTGAGTGAGAGCAT...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGATACTTTCACCTCCATaGTGCCAATGCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQILSPP*CQCSHS
Trigger: TGAGTGAGAGCATTGGCATCATGGAGGTGAAAGTAT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATATACTTTCACCTCCATaGTGCCAATGCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDILSPP*CQCSHS
Trigger: TGAGTGAGAGCATTGGCATCATGGAGGTGAAAGTAT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTACAGAGTATGCTCTTaGAGCTGGATTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQYRVCS*SWIPSA
Trigger: TGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTGAATGTGCAGAACCGTaGACAATAATCCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFECAEP*TIIHFL
Trigger: GAGAAAATGGATTATTGTTCACGGTTCTGCACATTC...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTGTCACAGAATTTTTCTaGAAGGTTGTTAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAVTEFF*KVVRRS
Trigger: TGACCGTCTAACAACCTTTCAGAAAAATTCTGTGAC...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAAAACACTCACTGGTTaGAGGATGGAATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFKTLTG*RMESGN
Trigger: ATTTCCTGATTCCATCCTTCAACCAGTGAGTGTTTT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGAATGTGGACAGCCTCTaGGTACATTTGGACATCTTG +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGNVDSL*VHLDIL
Trigger: CAAGATGTCCAAATGTACTCAGAGGCTGTCCACATT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGACTTTGCCTAGTTCCTaGCCACATCTGGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGTLPSS*PHLVIQ
Trigger: CTGAATTACCAGATGTGGTCAGGAACTAGGCAAAGT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTCTGGCAACAAGCACGTaGTTGAGCTGCATGAATCTG +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSLATST*LSCMNL
Trigger: CAGATTCATGCAGCTCAATCACGTGCTTGTTGCCAG...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGGAGTTGTAACTCACTaGAATAGAACCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDGVVTH*NRTTCL
Trigger: GAGGCATGTGGTTCTATTTCAGTGAGTTACAACTCC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTTTTTGCCGTTTCCAATaGCATTCTAACTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASFCRFQ*HSNWDS
Trigger: GGAATCCCAGTTAGAATGTCATTGGAAACGGCAAAA...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGATGAGCAGCTGTCTGTaGGGAAGAAAGGCTAAATCT +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGMSSCL*GRKAKS
Trigger: AGATTTAGCCTTTCTTCCTCACAGACAGCTGCTCAT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTTTGTTTGAAATAGTCTaGGTGAAACCCTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAALFEIV*VKPCQS
Trigger: AGACTGACAGGGTTTCACTCAGACTATTTCAAACAA...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTTTCTGTGGGCTTACATaGTTACGACAGAGATGCTTA +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASFCGLT*LRQRCL
Trigger: TAAGCATCTCTGTCGTAATCATGTAAGCCCACAGAA...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGGCCTCCAGGGAGGAGAAGAAAATGTACAAGAGCCATAGGAGCACAAAGAGGCAAGAAGACACGCAAATaGTTAATCTTCCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RPPGRRRKCTRAIGAQRGKKTRK*LIFLVS
Trigger: AGAGACAAGGAAGATTAAGCATTTGCGTGTCTTCTT...GCCTCTTTGTGCTCCTATGGCTCTTGTACATTTTCTTCTCCTCCCTGGAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGCTTGGTCAGCTGCATaGCTCTTTAAAATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQAWSAA*LFKMLP
Trigger: TGGCAACATTTTAAAGAGGCATGCAGCTGACCAAGC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGCTGGTCCTGGGTGGCTaGCACTTTGCTGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLLVLGG*HFAGKC
Trigger: ACATTTGCCAGCAAAGTGGCAGCCACCCAGGACCAG...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTTCCATTCCACTTTTATaGTTCTTCTTGGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASSIPLL*FFLEAA
Trigger: AGCTGCCTCCAAGAAGAAGCATAAAAGTGGAATGGA...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGGATCAGGGACCTTTTaGTGTGGAATCACCAATGAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQGSGTF*CGITNE
Trigger: TTCATTGGTGATTCCACAGCAAAAGGTCCCTGATCC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAAGGCGTATCTGTCTTTaGAGTCAACAAATTAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSRRICL*SQQIRR
Trigger: CCTCCTAATTTGTTGACTGCAAAGACAGATACGCCT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTGGGAGGTCAGGAATATaGTTCCTTCCATGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLGRSGI*FLPCLS
Trigger: GGAGAGGCATGGAAGGAAGCATATTCCTGACCTCCC...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTCCAAGTGCGACGAACACGACTGCAGTCACAGAATCTTTCAGGCCAATGGTGCTGGTGGTCTCTCCATTaGGTTTCTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: FQVRRTRLQSQNLSGQWCWWSLH*VSLWLF
Trigger: AAATAACCATAAAGAAACCCAATGGAGAGACCACCA...GCACCATTGGCCTGAAAGATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTCACAGTTGTCTTGGTaGTCTCTCCATTGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQSQLSW*SLHWVS
Trigger: AGAAACCCAATGGAGAGACCACCAAGACAACTGTGA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATCTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTC +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDLFAGQ*LLVIIF
Trigger: GAATATGATGACAAGCAGCCACTGACCAGCAAAGAG...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTC +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLFAGQ*LLVIIF
Trigger: GAATATGATGACAAGCAGCCACTGACCAGCAAAGAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGCATACTGGTCCTGGGTaGCTGCCACTTTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLHTGPG*LPLCWQ
Trigger: TTGCCAGCAAAGTGGCAGCCACCCAGGACCAGTATG...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTCTTCTTATCCATTTTaGTTCCTCAAGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFSSYPF*FLKHKG
Trigger: TCCCTTGTGCTTGAGGAACCAAAATGGATAAGAAGA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAAGTATCATACTACCTaGCACATTAAGTGGGTAACC +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFKYHTT*HIKWVT
Trigger: GGTTACCCACTTAATGTGCCAGGTAGTATGATACTT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGAATCAAGACCCCTGTaGAAAATGCAATGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDESRPL*KMQCEW
Trigger: CCACTCACATTGCATTTTCCACAGGGGTCTTGATTC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAGGGAAGACAACAAGATaGTTAGAAGTGGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSGKTTR*LEVVST
Trigger: TGTACTCACCACTTCTAACCATCTTGTTGTCTTCCC...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTGCAGTGCTTTCCTTTaGGAGTTCCACCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSCSAFL*EFHLSV
Trigger: CACTGAGAGGTGGAACTCCCAAAGGAAAGCACTGCA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCATGCTCACAGCTTCTTTaGGTGCTAGACTCATTTAAC +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSCSQLL*VLDSFN
Trigger: GTTAAATGAGTCTAGCACCCAAAGAAGCTGTGAGCA...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGCTGATGCTGCTTGTTTaGGGAACAAACTTGAGACTC +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGLMLLV*GTNLRL
Trigger: GAGTCTCAAGTTTGTTCCCCAAACAAGCAGCATCAG...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp ATTTTGCACGTTCCTGGGAATCTAGGCACGTTTTCCTaGTACCTGTTAAACGAGACTGCCAGGTATCACATG +
Preference number: 4 (lower is better)
Translates to: ILHVPGNLGTFS*YLLNETARYHM
Trigger: CATGTGATACCTGGCAGTCTCGTTTAACAGGTACAAGGAAAACGTGCCTAGATTCCCAGGAACGTGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTaGGTCACCCTGGCTTCTTTCTTACTCAGCAACTAC +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGP*VTLASFLLSNY
Trigger: GTAGTTGCTGAGTAAGAAAGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTACAGTAACTAACAGATaGAATCCCATTGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFTVTNR*NPIEKV
Trigger: CACCTTTTCAATGGGATTTCATCTGTTAGTTACTGT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTCAGTATGCCATCTTCTaGAGCTTCAGAAGATACTTT +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASQYAIF*SFRRYF
Trigger: AAAGTATCTTCTGAAGCTTCAGAAGATGGCATACTG...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCACATAGGATTCTTCAATaGTCACTTCCAACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSHRILQ*SLPTWC
Trigger: ACACCAAGTTGGAAGTGATCATTGAAGAATCCTATG...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAAAGCCAGGTCTCCAATaGAAGCTGTCAGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIKPGLQ*KLSVGQ
Trigger: TTGGCCTACTGACAGCTTTCATTGGAGACCTGGCTT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTATGCAATGTGAGTGGTaGGCTTTCATTAATAGTGAG +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASMQCEW*AFINSE
Trigger: CTCACTATTAATGAAAGCTCACCACTCACATTGCAT...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTCTGTGGAATCACCAATaGATCAAGACCCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSLWNHQ*IKTPVE
Trigger: TTCCACAGGGGTCTTGATTCATTGGTGATTCCACAG...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATCTCGCTACTTTATTTTaGCAGTTTAGGATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDLATLF*QFRIRD
Trigger: GTCCCTGATCCTAAACTGTCAAAATAAAGTAGCGAG...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTTGAAATGTACTGCGTaGTGGGAAGACAACAAGATG +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDLKCTA*WEDNKM
Trigger: CATCTTGTTGTCTTCCCATCACGCAGTACATTTCAA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAAACTCTCCAACTCTTTaGAAAAATGCTAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSNSPTL*KNAREA
Trigger: TGCTTCCCTAGCATTTTTTCAAAGAGTTGGAGAGTT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTTGATAAGAGAGCTCTaGGAAATCTCAGGTACCAAC +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGLIREL*EISGTN
Trigger: GTTGGTACCTGAGATTTCTCAGAGCTCTCTTATCAA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACCCCCTGTCAGTCTTTaGAGGTCATTTGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIPPVSL*RSFVMG
Trigger: ACCCATCACAAATGACCTTCAAAGACTGACAGGGGG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATATTCTCATTTATTGGTaGTATGGCAGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDILIYW*YGSCRK
Trigger: CTTCCTGCAGCTGCCATATCACCAATAAATGAGAAT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGATGAACATATTGAATaGAGCACTTCCCACGATGGT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQDEHIE*STSHDG
Trigger: ACCATCGTGGGAAGTGCTGCATTCAATATGTTCATC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAAGAAGACACGCAAATaGTTAATCTTCCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFKKTRK*LIFLVS
Trigger: AGAGACAAGGAAGATTAAGCATTTGCGTGTCTTCTT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAAGGTGTAGGCAAAGATaGTCCAGGCTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIRCRQR*SRLLSQ
Trigger: TTGTGACAGCAGCCTGGAGCATCTTTGCCTACACCT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATGTGTCTGGCACTGATGTTCCAAGTGCGACGAACACGACTGCAGTCACAGAATTTGACATTGCTGAGATaGACAAGGAAATTTTCATCC +
Preference number: 4 (lower is better)
Translates to: MCLALMFQVRRTRLQSQNLTLLR*TRKFSS
Trigger: GGATGAAAATTTCCTTGTGCATCTCAGCAATGTCAA...ATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAACATCAGTGCCAGACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR GCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGCACAAGGGAGAAACTaGACTCTTTCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDAQGRN*TLSHIP
Trigger: AGGAATATGAGAAAGAGTGCAGTTTCTCCCTTGTGC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTACAGGCATGGGAACCTaGCTGCTCAGTGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLTGMGT*LLSAMF
Trigger: AAACATAGCACTGAGCAGGCAGGTTCCCATGCCTGT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTACTGGTAGAACCAACTaGTCACAGCTTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPTGRTN*SQLLWV
Trigger: CACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGT...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGATCCCATTGAAAAGGTaGGTGAAAGACTTAATCGCC +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQIPLKR*VKDLIA
Trigger: GGCGATTAAGTCTTTCACCCACCTTTTCAATGGGAT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGACTCTGATTTCCTTCTaGGTATCACCAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQTLISF*VSPGLN
Trigger: GTTTAAGCCTGGTGATACCCAGAAGGAAATCAGAGT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCATCTTCTTATCCATTTTaGTTCCTCAAGCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSSSYPF*FLKHKG
Trigger: TCCCTTGTGCTTGAGGAACCAAAATGGATAAGAAGA...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTACTGTCACAACCTACTaGTTTGGGGAGTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPTVTTY*FGECEW
Trigger: CCATTCACACTCCCCAAACCAGTAGGTTGTGACAGT...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTAGCTGGGCTGAATGCTaGAAGAAGGACCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLSWAEC*KKDLAN
Trigger: ATTGGCAAGGTCCTTCTTCCAGCATTCAGCCCAGCT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATCCCACAGAATGTGTATaGAGAATATTCCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDPTECV*RIFHWE
Trigger: TTCCCAGTGGAATATTCTCCATACACATTCTGTGGG...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAACCCATACACATAAGTaGATGATAACAGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSTHTHK*MITGKH
Trigger: GTGTTTCCCTGTTATCATCCACTTATGTGTATGGGT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTTTTCCCGTCACGAAGTaGCCAGAAGTGGGTGATTGT +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLFPVTK*PEVGDC
Trigger: ACAATCACCCACTTCTGGCCACTTCGTGACGGGAAA...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGAGCAGTTGTGTTTACTaGCTGAGAGCATTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGSSCVY*LRAFLV
Trigger: TACCAGAAATGCTCTCAGCCAGTAAACACAACTGCT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCAGTATGCCATCTTCTaGAGCTTCAGAAGATACTTT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQQYAIF*SFRRYF
Trigger: AAAGTATCTTCTGAAGCTTCAGAAGATGGCATACTG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCATAGGATTCTTCAATaGTCACTTCCAACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQHRILQ*SLPTWC
Trigger: ACACCAAGTTGGAAGTGATCATTGAAGAATCCTATG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTTTCCGAACGGCACATaGAGAAGGAGCAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSFPNGT*RRSKCS
Trigger: TGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTACGTTCTTGAGATTATaGAACTACACTCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASTFLRL*NYTQNL
Trigger: CAAGTTCTGAGTGTAGTTTCATAATCTCAAGAACGT...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTACAATGATAAAAGCTaGATGCCAGTTGTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDYNDKS*MPVVGQ
Trigger: CTGACCTACAACTGGCATTCAGCTTTTATCATTGTA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCATCTATGCAGAATTTGTaGGAACAACCTGAGAATATC +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSSMQNL*EQPENI
Trigger: GATATTCTCAGGTTGTTCTCACAAATTCTGCATAGA...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTAAGGGAGGCCTGGAGTaGCAGTTACAACATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSKGGLE*QLQHFS
Trigger: AGAAAAATGTTGTAACTGTCACTCCAGGCCTCCCTT...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTTGGACACTCAAATGCTaGAGCTATGACCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLWTLKC*SYDQQQ
Trigger: CTGTTGCTGGTCATAGCTTCAGCATTTGAGTGTCCA...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGGCAAAAGTTGGGAATaGGGTCAAGGCTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLGKSWE*GQGSSL
Trigger: CAATGAGGAGCCTTGACCTCATTCCCAACTTTTGCC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATAGGAAGTCTGAATTCTaGGAGTTGGTTGTACATAAC +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDRKSEF*ELVVHN
Trigger: GTTATGTACAACCAACTCTCAGAATTCAGACTTCCT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCATTGACATTGCTGAGATaGACAAGGAAATTTTCATCC +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSLTLLR*TRKFSS
Trigger: GGATGAAAATTTCCTTGTGCATCTCAGCAATGTCAA...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAATGGCCCTGCCTCCATaGCTTGTTGAACATGATGAT +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIMALPP*LVEHDD
Trigger: ATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAACTACACTCAGAACTTaGTCTGCATGCAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLITTLRT*SACNCP
Trigger: TGGGCAGTTGCATGCAGAGCAAGTTCTGAGTGTAGT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTTCATCCATTCAAAGTaGTTGAAAGGGAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFFIHSK*LKGNVL
Trigger: CAAAACATTCCCTTTCAAGCACTTTGAATGGATGAA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATCCTCACAGTTGTCTTaGTGGTCTCTCCATTGGGTT +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLISSQLS*WSLHWV
Trigger: AACCCAATGGAGAGACCACCAAGACAACTGTGAGGA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTTCGATGGTTTTATATaGAACGATAACATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFFDGFI*NDNISS
Trigger: CGAGGAAATGTTATCGTTCCATATAAAACCATCGAA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGTGGACTCACTACTTTaGAATGTTGGGTTTATCCAT +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDVDSLL*NVGFIH
Trigger: ATGGATAAACCCAACATTCCAAAGTAGTGAGTCCAC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAACAAAACTGAAAATGTaGACAGCCTCTGAGTACATT +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSTKLKM*TASEYI
Trigger: AATGTACTCAGAGGCTGTCCACATTTTCAGTTTTGT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCATCAAACAAAACAGGCTaGTTCACAGCTGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSSNKTG*FTAERK
Trigger: TTTTCTTTCAGCTGTGAACCAGCCTGTTTTGTTTGA...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATACAGTAACTAACAGATaGAATCCCATTGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDTVTNR*NPIEKV
Trigger: CACCTTTTCAATGGGATTTCATCTGTTAGTTACTGT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAAGACAGTCTCTGCTTTaGGAGACGATTAATCATGGC +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIRQSLL*ETINHG
Trigger: GCCATGATTAATCGTCTCTCAAAGCAGAGACTGTCT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAAATGTGTCTAGGGATTaGGTCAGAACTATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLINVSRD*VRTIRL
Trigger: CAGCCTGATAGTTCTGACTCAATCCCTAGACACATT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCACAAGCACCTGCCACTaGTTGACAGCTCTACCAAGA +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTTSTCH*LTALPR
Trigger: TCTTGGTAGAGCTGTCAATCAGTGGCAGGTGCTTGT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTTGTTCACAATTTCTTaGATGAACACAAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDLFTIS*MNTRVC
Trigger: GCAAACCCTTGTGTTCATTCAAGAAATTGTGAACAA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGATTAGAAATCTCTaGCTGGAGAGGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTLIRNL*LERLPQ
Trigger: CTGAGGCAGCCTCTCCAGTCAGAGATTTCTAATCAG...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTTTGAAGGTCATTTGTaGTGGGTCCTTCAAACTGTG +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSFEGHL*WVLQTV
Trigger: CACAGTTTGAAGGACCCATCACAAATGACCTTCAAA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAAGAAGACACGCAAATaGTTAATCTTCCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQKKTRK*LIFLVS
Trigger: AGAGACAAGGAAGATTAAGCATTTGCGTGTCTTCTT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTTGACATTGCTGAGATaGACAAGGAAATTTTCATCC +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLTLLR*TRKFSS
Trigger: GGATGAAAATTTCCTTGTGCATCTCAGCAATGTCAA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGGATCACCAACATGATTaGCCTTCTTGGTTTAAAATG +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGDHQHD*PSWFKM
Trigger: CATTTTAAACCAAGAAGGGCAATCATGTTGGTGATC...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTGATGATGATACCAGTTaGACAATAATACCATTTTGG +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASDDDTS*TIIPFW
Trigger: CCAAAATGGTATTATTGTGCAACTGGTATCATCATC...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCGCTGGAAACCTGCAGTaGTTTCCTTTGGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTAGNLQ*FPLGVP
Trigger: TGGAACTCCCAAAGGAAAGCACTGCAGGTTTCCAGC...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACATTACTGCCCCTTCTaGAATCTCACTCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIHYCPF*NLTPYS
Trigger: AGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACAGACCAGTGTTCTGTaGACGTACACAGTATGTACA +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIQTSVL*TYTVCT
Trigger: TGTACATACTGTGTACGTGCACAGAACACTGGTCTG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGATTACATGGTCCACATaGGAAAATAAGAGACTCACA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQITWST*ENKRLT
Trigger: TGTGAGTCTCTTATTTTCCCATGTGGACCATGTAAT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTGGTGGTCTCTCCATTaGGTTTCTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQWWSLH*VSLWLF
Trigger: AAATAACCATAAAGAAACCCAATGGAGAGACCACCA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCAAAGAGGACTAGACTaGACAGTGAAAGAAACAGGG +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLQRGLD*TVKETG
Trigger: CCCTGTTTCTTTCACTGTCCAGTCTAGTCCTCTTTG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCACGTACCATTTCTTGTaGGCTGGAAACCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTTYHFL*AGNLQC
Trigger: GCACTGCAGGTTTCCAGCCCACAAGAAATGGTACGT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTACCCTAATTGCACTCTaGGGACAAAGATTTTCCATG +
Preference number: 4 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPTLIAL*GQRFSM
Trigger: CATGGAAAATCTTTGTCCCCAGAGTGCAATTAGGGT...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTTTAACTTACATGGAATaGTTAGGTAGGTGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SISRGDNTFKGPLVTLASLTYME*LGRWEN
Trigger: ATTTTCCCACCTACCTAACCATTCCATGTAAGTTAA...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp AGAAGGAGCAAATGTTCAGTCATGACTGGAACAGGATaGTGCAAGCCATGGATGCCTTTGAAAATAAAACTG +
Preference number: 4 (lower is better)
Translates to: RRSKCSVMTGTG*CKPWMPLKIKL
Trigger: CAGTTTTATTTTCAAAGGCATCCATGGCTTGCACAATCCTGTTCCAGTCATGACTGAACATTTGCTCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp TTATATTTCTATCAAACTTCATGTGGTTACATGGGCTaGACAAGTGCATTGGTGACCCAATATGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LYFYQTSCGYMG*TSALVTQYGQQ
Trigger: CTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACATGAAGTTTGATAGAAATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp ATTAAAGTCCATATTGCCAGGGTCACTCCAAAATTTTaGATTCATAGATCTGGGCTGAAGTCTCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: IKVHIARVTPKF*IHRSGLKSQVG
Trigger: TCCCACCTGAGACTTCAGCCCAGATCTATGAATCAAAAATTTTGGAGTGACCCTGGCAATATGGACTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGTACAGAGTATGCTCTTaGAGCTGGATTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLYRVCS*SWIPSA
Trigger: TGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTA...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTACTGCCTTGGCCAAGTaGAGTGATTACAATGATAAA +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSTALAK*SDYNDK
Trigger: TTTATCATTGTAATCACTTCACTTGGCCAAGGCAGT...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTCACGGCAACAAGTTTaGAATAATAGGTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSSRQQV*NNRFTL
Trigger: GAGAGTGAACCTATTATTTCAAACTTGTTGCCGTGA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTGGGTCTTCTCTCTGGTaGCTTTTTGATGTTAAAATG +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSGSSLW*LFDVKM
Trigger: CATTTTAACATCAAAAAGTCACCAGAGAGAAGACCC...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCATTGGTGCAAGAAGTTaGGGAAGACGAGATGAGCGT +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTIGARS*GRRDER
Trigger: ACGCTCATCTCGTCTTCCTCAACTTCTTGCACCAAT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTCACAATTTCTTGAATaGACACAAGGGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSSQFLE*TQGFAD
Trigger: GTCAGCAAACCCTTGTGTTCATTCAAGAAATTGTGA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGTTGAATTGTACCACTaGCCTACGAAAACCACCACA +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLVELYH*PTKTTT
Trigger: TGTGGTGGTTTTCGTAGGTCAGTGGTACAATTCAAC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTTATTGGAAGAGTGTTaGATTGTACCACTGACCTAC +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSLLEEC*IVPLTY
Trigger: GTAGGTCAGTGGTACAATTCAACACTCTTCCAATAA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGATTTCTTTATCTGGATaGTTCTGCTTAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQISLSG*FCLSSF
Trigger: GAAGGAACTTAAGCAGAAGCATCCAGATAAAGAAAT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGTTGCTGGTCAGTGGCTaGTTGTCATCATATTCGTCT +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLLLVSG*LSSYSS
Trigger: AGACGAATATGATGACAAGCAGCCACTGACCAGCAA...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR GCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGTTGAAAGGGCTAGTTTaGCTGTTAGCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLLKGLV*LLAGSW
Trigger: CCAAGATCCTGCTAACAGGCAAACTAGCCCTTTCAA...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTGTTTTTCCAACCGTaGACATGGAATTATTTCAAA +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLFFQP*TWNYFK
Trigger: TTTGAAATAATTCCATGTGCACGGTTGGAAAAACAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGATTTTGCACGTTCCTaGGAATCTAGGCACGTTTTC +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLDFARS*ESRHVF
Trigger: GAAAACGTGCCTAGATTCCCAGGAACGTGCAAAATC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTAGACTGTTTTGTTCATaGCTTAGTCCCCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPRLFCS*LSPQKV
Trigger: TACTTTCTGGGGACTAAGCCATGAACAAAACAGTCT...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTCTATCAAACTTCATGTaGTTACATGGGCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPLSNFM*LHGLDK
Trigger: CTTGTCAAGCCCATGTAACCACATGAAGTTTGATAG...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTTTAAGTCTGAATGGTaGACATATCTCCCATATATC +
Preference number: 4 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDFKSEW*TYLPYI
Trigger: GATATATGGGAGATATGTCCACCATTCAGACTTAAA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGAAAGTAGATCAGCTGTaGGGTTTTAAAAGAACTAGA +
Preference number: 4 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGKVDQL*GFKRTR
Trigger: TCTAGTTCTTTTAAAACCCCACAGCTGATCTACTTT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGAATGGTTAGGTAGGTaGGAAAATTATATGGCAATT +
Preference number: 4 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQEWLGR*ENYMAI
Trigger: AATTGCCATATAATTTTCCCACCTACCTAACCATTC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCAAGGCAGACATCCGCTaGAAATGCTTATGGTGCATA +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTKADIR*KCLWCI
Trigger: TATGCACCATAAGCATTTTCAGCGGATGTCTGCCTT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCTTTTCTTTATGGATTaGCTATTGTGCTTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLLFFMD*LLCLLG
Trigger: ACCGAGCAAGCACAATAGTCAATCCATAAAGAAAAG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCCACAGGAATATGGCTaGGTGTACATTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTPQEYG*VYIESQ
Trigger: CTGTGATTCAATGTACACTCAGCCATATTCCTGTGG...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTCATTTTGAAATGTACTaGGTGATGGGAAGACAACAA +
Preference number: 4 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPHFEMY*VMGRQQ
Trigger: TTGTTGTCTTCCCATCACGCAGTACATTTCAAAATG...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCAAGGATTTATCAACCTaGAGAGAGTGCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTKDLST*RECSPS
Trigger: AGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTACATGTAACTGTTTATaGGCTTATGATCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLTCNCL*AYDPGC
Trigger: GCATCCAGGATCATAAGCCCATAAACAGTTACATGT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGACTGTTTATTCCCATaGGGAAAACTCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLDCLFP*GKLSNS
Trigger: AGAGTTGGAGAGTTTTCCCCATGGGAATAAACAGTC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTAGAAATCAACCACTATaGACGGCAAAAGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLRNQPL*TAKVGN
Trigger: ATTCCCAACTTTTGCCGTCCATAGTGGTTGATTTCT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCTCGAACGGCAAGTCGTaGAGATTACATTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTSNGKS*RLHSLA
Trigger: TGCCAATGAATGTAATCTCCACGACTTGCCGTTCGA...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp TTGCATAGCAGAAAAATAGTACCCACAGAGAAGCATTaGACCCACTCATATTTCTTAGAGGCATGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: LHSRKIVPTEKH*THSYFLEAWKL
Trigger: TAGCTTCCATGCCTCTAAGAAATATGAGTGGGTCAAATGCTTCTCTGTGGGTACTATTTTTCTGCTATGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp TTGAATAAAAGACCCTATATCAAACTTACACAGGTCTaGGCTCATGGTAATCTCTGGATGTGTGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LNKRPYIKLTQV*AHGNLWMCVLG
Trigger: ACCCAACACACACATCCAGAGATTACCATGAGCCAAGACCTGTGTAAGTTTGATATAGGGTCTTTTATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp GTGCTTGCTCGGTATGAGTTCAGTTTACTATCAAAATaGTCCACCAAGTTATTCAGTGGGAAACACAATTGC +
Preference number: 4 (lower is better)
Translates to: VLARYEFSLLSK*STKLFSGKHNC
Trigger: GCAATTGTGTTTCCCACTGAATAACTTGGTGGACAATTTTGATAGTAAACTGAACTCATACCGAGCAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACTACTGTACACTTCTTaGAAAGGGAGAAATTACTCA +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLILLYTS*KGRNYS
Trigger: TGAGTAATTTCTCCCTTTTCAAGAAGTGTACAGTAG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATTTCCATGTGGAATGTaGAGGTCAATATTGGATTTC +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIFPCGM*RSILDF
Trigger: GAAATCCAATATTGACCTTCACATTCCACATGGAAA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTATTTCTTTATCTGGATaGTTCTGCTTAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSISLSG*FCLSSF
Trigger: GAAGGAACTTAAGCAGAAGCATCCAGATAAAGAAAT...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATTTAATCACCCTAATTaGACTCTGGGGACAAAGATT +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIFNHPN*TLGTKI
Trigger: AATCTTTGTCCCCAGAGTGCAATTAGGGTGATTAAA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGCTCTGCTTTCAGTTCTaGACCAATTCAAATGAGAGA +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLLCFQF*TNSNER
Trigger: TCTCTCATTTGAATTGGTGCAGAACTGAAAGCAGAG...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTTCGATGGTTTTATATaGAACGATAACATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSFDGFI*NDNISS
Trigger: CGAGGAAATGTTATCGTTCCATATAAAACCATCGAA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACTGATGTGTTCCACATaGCTAATTTTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLILMCST*LIFHED
Trigger: ATCTTCATGGAAAATTAGCCATGTGGAACACATCAG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTCCATTTGGAAAGAATaGGAAATACAGTCAAGTATG +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSSIWKE*EIQSSM
Trigger: CATACTTGACTGTATTTCCCATTCTTTCCAAATGGA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTAAACATGCTTTTCTTTaGTTGCCAAAGCCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: RYHNNISERHMKKEQMFSKHAFL*LPKPKS
Trigger: ACTTTTTGGCTTTGGCAACCAAAGAAAAGCATGTTT...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp TCTGGCATTATGATATGCCACCCTTTTCTTTATGGATaGACTATTGTGCTTGCTCGGTATGAGTTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SGIMICHPFLYG*TIVLARYEFSL
Trigger: TAAACTGAACTCATACCGAGCAAGCACAATAGTCAATCCATAAAGAAAAGGGTGGCATATCATAATGCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp GTGGGCTTACATGATTACGACAGAGATGCTTACCCTTaGAAATCACATATAACGATGGTGCTATACAAACAT +
Preference number: 4 (lower is better)
Translates to: VGLHDYDRDAYP*KSHITMVLYKH
Trigger: ATGTTTGTATAGCACCATCGTTATATGTGATTTCAAAGGGTAAGCATCTCTGTCGTAATCATGTAAGCCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR TCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCTGTATAGGAAATTCATaGTCACCTCTTAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTCIGNS*SPLRET
Trigger: TGTCTCCCTAAGAGGTGATCATGAATTTCCTATACA...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACCACATGACAGTTATTaGTTCTTAGAAATGAATGTG +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIPHDSY*FLEMNV
Trigger: CACATTCATTTCTAAGAAGCAATAACTGTCATGTGG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTAAGAATTGTAAAGTGTaGGCCATAGAAAAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLKNCKV*AIEKFH
Trigger: ATGGAACTTTTCTATGGCCCACACTTTACAATTCTT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTCTGTCAATCATAAAATaGCCAAACGTTCTTGAGATT +
Preference number: 4 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLLSIIK*PNVLEI
Trigger: AATCTCAAGAACGTTTGGCCATTTTATGATTGACAG...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATATTTCTTAGAGGCATaGAAGCTATCTGTTACGTTT +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIYFLEA*KLSVTF
Trigger: AAACGTAACAGATAGCTTCCATGCCTCTAAGAAATA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATTTTCTTCCACCCCATaGAAATGTCTACATTCTTTT +
Preference number: 4 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIFSSTP*KCLHSF
Trigger: AAAAGAATGTAGACATTTCCATGGGGTGGAAGAAAA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp AAATTTCTCACAGGATTACCGATGGCAGTAAAAACCTaGTTCTCCTTAGAGTTTTGGACTGAAACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KFLTGLPMAVKT*FSLEFWTETSK
Trigger: CTTTGAAGTTTCAGTCCAAAACTCTAAGGAGAACAAGGTTTTTACTGCCATCGGTAATCCTGTGAGAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp TGGAAATGTCTACATTCTTTTGCTATGTTTCGTCTGTaGTGCAATTTCATTTTGCTAATGAGGCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: WKCLHSFAMFRL*CNFILLMRHLS
Trigger: GCTCAGATGCCTCATTAGCAAAATGAAATTGCACAACAGACGAAACATAGCAAAAGAATGTAGACATTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCTGGTGGTCTCTCCATTaGGTTTCTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTWWSLH*VSLWLF
Trigger: AAATAACCATAAAGAAACCCAATGGAGAGACCACCA...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CCA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGCATGATTGCCCTTCTTaGTTTAAAATGGAGAGATAT +
Preference number: 4 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLHDCPS*FKMERY
Trigger: ATATCTCTCCATTTTAAACCAAGAAGGGCAATCATG...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR GCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCATGCTTTTCTTTGGTTaGCAAAGCCAAAAAGTATGT +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTMLFFG*QSQKVC
Trigger: ACATACTTTTTGGCTTTGGCAACCAAAGAAAAGCAT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CCA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCATCAACATTGCCAAATaGGAGAACAGTATGTACTAT +
Preference number: 4 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTINIAK*ENSMYY
Trigger: ATAGTACATACTGTTCTCCCATTTGGCAATGTTGAT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
3UTR CAA 72 bp TTGATATTTCCCCACAGGAATATGGCTGAGTGTACATaGAATCACAGAGTCAACAAAGTAACATCTAATTTA +
Preference number: 4 (lower is better)
Translates to: LIFPHRNMAECT*NHRVNKVTSNL
Trigger: TAAATTAGATGTTACTTTGTTGACTCTGTGATTCAATGTACACTCAGCCATATTCCTGTGGGGAAATATCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGAGACAGCCTTCCTTGCTaGGTCAGCTGCATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRDSLPC*VSCMPL
Trigger: AAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGTC...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGAAAGACATTCACCGCGTaGCTGCCCGTGACGTTACCT +
Preference number: 5 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRKTFTA*LPVTLP
Trigger: AGGTAACGTCACGGGCAGCAACGCGGTGAATGTCTT...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp GAGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGTGCCTCCATGCCTTGTaGAACATGATGATGCCCCTG +
Preference number: 5 (lower is better)
Translates to: ELGSPGPTQLTSDFWPPPCLHAL*NMMMPL
Trigger: CAGGGGCATCATCATGTTCAACAAGGCATGGAGGCA...CGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp GAGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGAGCAGCACCCCCACATaGATGAAAGCAAAAATGGTG +
Preference number: 5 (lower is better)
Translates to: ELGSPGPTQLTSDFWPPPSSTPT*MKAKMV
Trigger: CACCATTTTTGCTTTCATCAATGTGGGGGTGCTGCT...CGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS CCA 90 bp CTTTTAAACAGCTCCCGATCAGGAAGAGGTCGCTCCCATCTTCTGTaGGAAGCACAAAGCAGGCGGCGGCGGCGGGCTGACTACCGTGCA +
Preference number: 5 (lower is better)
Translates to: LLNSSRSGRGRSHLL*EAQSRRRRRADYRA
Trigger: TGCACGGTAGTCAGCCCGCCGCCGCCGCCTGCTTTGTGCTTCCCACAGAAGATGGGAGCGACCTCTTCCTGATCGGGAGCTGTTTAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp GAGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGACAGATGAAATCCCATaGAAAAGGTGGGTGAAAGAC +
Preference number: 5 (lower is better)
Translates to: ELGSPGPTQLTSDFWPPPTDEIP*KRWVKD
Trigger: GTCTTTCACCCACCTTTTCAATGGGATTTCATCTGT...CGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp AGCTTGGCAGTCCGGGGCCCACCCAGCTCACCTCCGATTTCTGGCCTCCGCCGACATGAGGCGAGTAGCTaGAATGCGATAAAATGCTCT +
Preference number: 5 (lower is better)
Translates to: SLAVRGPPSSPPISGLRRHEASS*NAIKCS
Trigger: AGAGCATTTTATCGCATTCAAGCTACTCGCCTCATG...TCGGCGGAGGCCAGAAATCGGAGGTGAGCTGGGTGGGCCCCGGACTGCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGTGGGTGGCTGCCACTTaGCTGGCAAATGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLWVAAT*LANVSG
Trigger: GCCAGACACATTTGCCAGCAAAGTGGCAGCCACCCA...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGCTGTGGCCGACCGGTaGATTGCTAAGGGTGAGATT +
Preference number: 5 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAAVADR*IAKGEI
Trigger: AATCTCACCCTTAGCAATCAACCGGTCGGCCACAGC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCAGATCAGTCTGGGCCTaGTGGTTCATTTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWARSVWA*WFIWAR
Trigger: TCTGGCCCAAATGAACCACAAGGCCCAGACTGATCT...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGGGCTGAGCTGAGGTaGTGGTATGGCCCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMGAELR*WYGPSP
Trigger: AGGACTGGGGCCATACCACAACCTCAGCTCAGCCCC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATGGGTGGCTGCCACTTaGCTGGCAAATGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGWVAAT*LANVSG
Trigger: GCCAGACACATTTGCCAGCAAAGTGGCAGCCACCCA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGTGCCAGGGGACACTTaGAACTGTTCCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRVPGDT*NCSPLA
Trigger: AGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCAC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTGCCTCCATGCCTTGTaGAACATGATGATGCCCCTG +
Preference number: 5 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGCLHAL*NMMMPL
Trigger: CAGGGGCATCATCATGTTCAACAAGGCATGGAGGCA...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCTCAGGTACCAACTGTTaGAAAGGGCTAGTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWASGTNC*KGLVCL
Trigger: CAGGCAAACTAGCCCTTTCAAACAGTTGGTACCTGA...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGTAGCTCTAGCAATTTaGTCCCCAAAAGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAVALAI*SPKEGS
Trigger: AGACCCTTCTTTTGGGGACAAAATTGCTAGAGCTAC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGATCATCCCCCTCTGCTaGCCAGCTCGATACCTCTTG +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMIIPLC*PARYLL
Trigger: CAAGAGGTATCGAGCTGGCAAGCAGAGGGGGATGAT...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGATGATCACTTCCAACTaGGTGTGCTCTCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRMITSN*VCSPRM
Trigger: CATCCTGGGAGAGCACACCAAGTTGGAAGTGATCAT...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGCTGGAAGAAGGACCTaGCCAATCACAGTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMAGRRT*PITVQS
Trigger: GCTCTGGACTGTGATTGGCAAGGTCCTTCTTCCAGC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTATGGACGGCAAAAGTaGGGAATGAGGTCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRYGRQK*GMRSRL
Trigger: GAGCCTTGACCTCATTCCCAACTTTTGCCGTCCATA...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGCCCCCTGTCAGTCTTaGAAGGTCATTTGTGATGGG +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDAPCQS*KVICDG
Trigger: CCCATCACAAATGACCTTCAAAGACTGACAGGGGGC...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCACAGATGAAATCCCATaGAAAAGGTGGGTGAAAGAC +
Preference number: 5 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWATDEIP*KRWVKD
Trigger: GTCTTTCACCCACCTTTTCAATGGGATTTCATCTGT...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGCCCAAAAGAAGGGTCTaGGGGTTCCCAAATGGGCAA +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMPKRRV*GFPNGQ
Trigger: TTGCCCATTTGGGAACCCCAAGACCCTTCTTTTGGG...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGGTAGCTCTAGCAATTTaGTCCCCAAAAGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLVALAI*SPKEGS
Trigger: AGACCCTTCTTTTGGGGACAAAATTGCTAGAGCTAC...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTCCAGATCCTCACAGTaGTCTTGGTGGTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDSRSSQ*SWWSLH
Trigger: ATGGAGAGACCACCAAGACAACTGTGAGGATCTGGA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTTGCCTCTTTAAAATGTaGCCAGCTCCAGTCATGAGG +
Preference number: 5 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGCLFKM*PAPVMR
Trigger: CCTCATGACTGGAGCTGGCAACATTTTAAAGAGGCA...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATCAGTCACTTCAGTGTaGACCTCGTGCATGCTGACA +
Preference number: 5 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGSVTSV*TSCMLT
Trigger: TGTCAGCATGCACGAGGTCAACACTGAAGTGACTGA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAAATCAGACCCAGCATTaGCTGTGCCATCCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGNQTQH*LCHPLF
Trigger: GAACAGAGGATGGCACAGCAAATGCTGGGTCTGATT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTGGGTGGCTGCCACTTaGCTGGCAAATGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFWVAAT*LANVSG
Trigger: GCCAGACACATTTGCCAGCAAAGTGGCAGCCACCCA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTAGCAGCACCCCCACATaGATGAAAGCAAAAATGGTG +
Preference number: 5 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGSSTPT*MKAKMV
Trigger: CACCATTTTTGCTTTCATCAATGTGGGGGTGCTGCT...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp ATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGGTACAGAGTATGCTCTaGAAGCTGGATTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: MALPPCLVEHDDAPGNGRVQSML*KLDSIS
Trigger: GCTGATGGAATCCAGCTTCAAGAGCATACTCTGTAC...CCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCAGTGGACTCACTACTTaGGAATGTTGGGTTTATCCA +
Preference number: 5 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWASGLTT*ECWVYP
Trigger: TGGATAAACCCAACATTCCAAAGTAGTGAGTCCACT...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGCTTGACAAGTGCATaGGTGACCCAATATGGGCAG +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMGLTSA*VTQYGQ
Trigger: CTGCCCATATTGGGTCACCAATGCACTTGTCAAGCC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS GCA 90 bp TTGACCTCGTGCATGCTGACAGCCTTCCTTGCTTGGTCAGCTGCATaGCTCTTTAAAATGTTGCCAGCTCCAGTCATGAGGCGAGTAGCT +
Preference number: 5 (lower is better)
Translates to: LTSCMLTAFLAWSAA*LFKMLPAPVMRRVA
Trigger: AGCTACTCGCCTCATGACTGGAGCTGGCAACATTTTAAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGTCAGCATGCACGAGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGTCCAGATCCTCACAGTaGTCTTGGTGGTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMSRSSQ*SWWSLH
Trigger: ATGGAGAGACCACCAAGACAACTGTGAGGATCTGGA...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCATGAGGCGAGTAGCTaGAATGCGATAAAATGCTCT +
Preference number: 5 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGHEASS*NAIKCS
Trigger: AGAGCATTTTATCGCATTCAAGCTACTCGCCTCATG...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGATGCCTCTTTAAAATGTaGCCAGCTCCAGTCATGAGG +
Preference number: 5 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGCLFKM*PAPVMR
Trigger: CCTCATGACTGGAGCTGGCAACATTTTAAAGAGGCA...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTGACAGCCTTCCTTGCTaGGTCAGCTGCATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFDSLPC*VSCMPL
Trigger: AAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGTC...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGTCAGTCACTTCAGTGTaGACCTCGTGCATGCTGACA +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMSVTSV*TSCMLT
Trigger: TGTCAGCATGCACGAGGTCAACACTGAAGTGACTGA...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCTTCCTGAAGACAGGTaGGCCAAACAGGTATTTTCC +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDLPEDR*AKQVFS
Trigger: GGAAAATACCTGTTTGGCCAACCTGTCTTCAGGAAG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403092.5
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAAGACATTCACCGCGTaGCTGCCCGTGACGTTACCT +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFKTFTA*LPVTLP
Trigger: AGGTAACGTCACGGGCAGCAACGCGGTGAATGTCTT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCTTAATCGCCGCATGTaGTACATGACACTTCCAACT +
Preference number: 5 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGLNRRM*YMTLPT
Trigger: AGTTGGAAGTGTCATGTACAACATGCGGCGATTAAG...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403092.5
ENST00000406785.6
CDS-3UTR CAA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCGAAGATCTTTGTAGTTaGCCTGCTATCCTCTCAATA +
Preference number: 5 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAEDLCS*PAILSI
Trigger: TATTGAGAGGATAGCAGGCAAACTACAAAGATCTTC...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAGCCCCAGTCCTAGGATaGGTCCCACCTACTTTGCCT +
Preference number: 5 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSAPVLG*VPPTLP
Trigger: AGGCAAAGTAGGTGGGACCAATCCTAGGACTGGGGC...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCTGACCATACGGGGCTaGATGTGTTCTGGAAAATCA +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDLTIRG*MCSGKS
Trigger: TGATTTTCCAGAACACATCAAGCCCCGTATGGTCAG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS CCA 90 bp GTCACTTCAGTGTTGACCTCGTGCATGCTGACAGCCTTCCTTGCTTaGTCAGCTGCATGCCTCTTTAAAATGTTGCCAGCTCCAGTCATG +
Preference number: 5 (lower is better)
Translates to: VTSVLTSCMLTAFLA*SAACLFKMLPAPVM
Trigger: CATGACTGGAGCTGGCAACATTTTAAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGTCAGCATGCACGAGGTCAACACTGAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS-3UTR CAA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGCTTCAGAAGATACTTaGACATTGCTGAGATGCACA +
Preference number: 5 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGASEDT*TLLRCT
Trigger: TGTGCATCTCAGCAATGTCAAAGTATCTTCTGAAGC...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTGGGTGGCTGCCACTTaGCTGGCAAATGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQWVAAT*LANVSG
Trigger: GCCAGACACATTTGCCAGCAAAGTGGCAGCCACCCA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp GAGGACCCATGTGGTCAAAGATGTCCCGGTATGTGTGGTGGGACTGGGTGGGCCAAAACCCATTTACATTaGGATGGTTTCACTTTCCAC +
Preference number: 5 (lower is better)
Translates to: EDPCGQRCPGMCGGTGWAKTHLH*DGFTFH
Trigger: GTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTT...GGCCCACCCAGTCCCACCACACATACCGGGACATCTTTGACCACATGGGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGAATGGTGTGTGCTTTaGTACAAAACTTGTGGATCC +
Preference number: 5 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGEWCVL*YKTCGS
Trigger: GGATCCACAAGTTTTGTACAAAAGCACACACCATTC...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTCACAATTCTCATTTATaGGTGATATGGCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: WPCLHALLNMMMPLGMGGHNSHL*VIWQLQ
Trigger: CTGCAGCTGCCATATCACCAATAAATGAGAATTGTG...ACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGTAGCTCTAGCAATTTaGTCCCCAAAAGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMVALAI*SPKEGS
Trigger: AGACCCTTCTTTTGGGGACAAAATTGCTAGAGCTAC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTATCCTCACAGTTGTCTaGGTGGTCTCTCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFILTVV*VVSPLG
Trigger: ACCCAATGGAGAGACCACCAAGACAACTGTGAGGAT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTCCAGATCCTCACAGTaGTCTTGGTGGTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFSRSSQ*SWWSLH
Trigger: ATGGAGAGACCACCAAGACAACTGTGAGGATCTGGA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp ATGTGTCTGGCACTGATGTTCCAAGTGCGACGAACACGACTGCAGTCACAGAATTCCAGATCCTCACAGTaGTCTTGGTGGTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: MCLALMFQVRRTRLQSQNSRSSQ*SWWSLH
Trigger: ATGGAGAGACCACCAAGACAACTGTGAGGATCTGGA...ATTCTGTGACTGCAGTCGTGTTCGTCGCACTTGGAACATCAGTGCCAGACACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGATCATCCCCCTCTGCTaGCCAGCTCGATACCTCTTG +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQIIPLC*PARYLL
Trigger: CAAGAGGTATCGAGCTGGCAAGCAGAGGGGGATGAT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATGACAGCCTTCCTTGCTaGGTCAGCTGCATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDDSLPC*VSCMPL
Trigger: AAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGTC...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTCAGTCACTTCAGTGTaGACCTCGTGCATGCTGACA +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFSVTSV*TSCMLT
Trigger: TGTCAGCATGCACGAGGTCAACACTGAAGTGACTGA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGACACTGATATGTCCCTaGTTCAAAGAAGATCTTACT +
Preference number: 5 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLTLICP*FKEDLT
Trigger: AGTAAGATCTTCTTTGAACAAGGGACATATCAGTGT...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCTGGTCAGTGGCTGCTaGTCATCATATTCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLVSGC*SSYSSA
Trigger: TGCAGACGAATATGATGACAAGCAGCCACTGACCAG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403092.5
ENST00000405901.7
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAAGACATTCACCGCGTaGCTGCCCGTGACGTTACCT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQKTFTA*LPVTLP
Trigger: AGGTAACGTCACGGGCAGCAACGCGGTGAATGTCTT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGTGCCAGGGGACACTTaGAACTGTTCCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQVPGDT*NCSPLA
Trigger: AGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCAC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CTGACAGTGATAGCTTCAATGAACTGTTCTCTCCAGCTGTTAGTCCCAACCACAGTGCCAGGGGACACTTaGAACTGTTCCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: LTVIASMNCSLQLLVPTTVPGDT*NCSPLA
Trigger: AGCCAATGGGGAACAGTTCAAAGTGTCCCCTGGCAC...TGTGGTTGGGACTAACAGCTGGAGAGAACAGTTCATTGAAGCTATCACTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCCCTGCCTCCATGCCTaGTTGAACATGATGATGCCC +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQPCLHA*LNMMMP
Trigger: GGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TCTCCCAGGATGGGGCGCCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGAAAACCCATTTACATTaGGATGGTTTCACTTTCCAC +
Preference number: 5 (lower is better)
Translates to: SPRMGRPISAMRLSSSSLKTHLH*DGFTFH
Trigger: GTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTT...CAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGGCGCCCCATCCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407929.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTACTTAAACATCCCCTaGGGAAGAAACTGTACTACC +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDYLNIP*GRNCTT
Trigger: GGTAGTACAGTTTCTTCCCAAGGGGATGTTTAAGTA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCTTCCTGAAGACAGGTaGGCCTGTTATTGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLPEDR*ACYCEA
Trigger: GGCTTCACAATAACAGGCCAACCTGTCTTCAGGAAG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405901.7
CDS CCA 90 bp CCCCATTTCTGCAATGCGCCTCTCCTCTTCCTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTCGTCTGCAATGGTGATTACAGTAGA +
Preference number: 5 (lower is better)
Translates to: PHFCNAPLLFLFAGQ*LLVIIFVCNGDYSR
Trigger: TCTACTGTAATCACCATTGCAGACGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGGAGAGGCGCATTGCAGAAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332839.8
ENST00000403092.5
ENST00000405901.7
ENST00000408028.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTGCCTCTTTAAAATGTaGCCAGCTCCAGTCATGAGG +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFCLFKM*PAPVMR
Trigger: CCTCATGACTGGAGCTGGCAACATTTTAAAGAGGCA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTATGATCACTTCCAACTaGGTGTGCTCTCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SISRGDNTFKGPLVTLASMITSN*VCSPRM
Trigger: CATCCTGGGAGAGCACACCAAGTTGGAAGTGATCAT...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAGCAGCACCCCCACATaGATGAAAGCAAAAATGGTG +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFSSTPT*MKAKMV
Trigger: CACCATTTTTGCTTTCATCAATGTGGGGGTGCTGCT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGACGTTTGCAAGAGTTaGAATACTTGGTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGDVCKS*NTWCLF
Trigger: AAACAGACACCAAGTATTCAAACTCTTGCAAACGTC...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTGGGATTGGAATTTTTaGGGATCGACTGATTTGATG +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDWDWNF*GSTDLM
Trigger: CATCAAATCAGTCGATCCCAAAAAATTCCAATCCCA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTAACTACACTCAGAACTaGCTCTGCATGCAACTGCCC +
Preference number: 5 (lower is better)
Translates to: SISRGDNTFKGPLVTLASNYTQN*LCMQLP
Trigger: GGGCAGTTGCATGCAGAGCAAGTTCTGAGTGTAGTT...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTCAAAGAGAAAAGCCTTaGGGTCTTCTCTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAQREKP*GLLSGD
Trigger: GTCACCAGAGAGAAGACCCAAAGGCTTTTCTCTTTG...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATCTTATTGGAAGAGTGTaGAATTGTACCACTGACCTA +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDLIGRV*NCTTDL
Trigger: TAGGTCAGTGGTACAATTCAACACTCTTCCAATAAG...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAACCTTCTGTACAACATaGTTAGACTGCTCAGTTAAC +
Preference number: 5 (lower is better)
Translates to: RWPCLHALLNMMMPLGMGTFCTT*LDCSVN
Trigger: GTTAACTGAGCAGTCTAACAATGTTGTACAGAAGGT...TCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS TCA 90 bp ACAGTGGCAGTGGAGGGAGATCCGAGGCAAGCAAGTGTAGAAACATaGTTGGCTTCCAGTATGCCATCTTCTGAAGCTTCAGAAGATACT +
Preference number: 5 (lower is better)
Translates to: TVAVEGDPRQASVET*LASSMPSSEASEDT
Trigger: AGTATCTTCTGAAGCTTCAGAAGATGGCATACTGGAAGCCAATCATGTTTCTACACTTGCTTGCCTCGGATCTCCCTCCACTGCCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS GCA 90 bp ATCTTACTAACAGGGTCATTTTCAGTCACTTCAGTGTTGACCTCGTaGATGCTGACAGCCTTCCTTGCTTGGTCAGCTGCATGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ILLTGSFSVTSVLTS*MLTAFLAWSAACLF
Trigger: AAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGTCAGCATGCACGAGGTCAACACTGAAGTGACTGAAAATGACCCTGTTAGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS CCA 90 bp TCCTTCAGAATCCTAGCCATTTCTCGCCTAGCTTCTTCATCATCTTaGTCCCTCTCATCCACCTCCAGAACCAGAGCACCATCTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SFRILAISRLASSSS*SLSSTSRTRAPSKK
Trigger: TTTCTTAGATGGTGCTCTGGTTCTGGAGGTGGATGAGAGGGACCAAGATGATGAAGAAGCTAGGCGAGAAATGGCTAGGATTCTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGATCCTCACAGTTGTCTaGGTGGTCTCTCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQILTVV*VVSPLG
Trigger: ACCCAATGGAGAGACCACCAAGACAACTGTGAGGAT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATATCCTCACAGTTGTCTaGGTGGTCTCTCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDILTVV*VVSPLG
Trigger: ACCCAATGGAGAGACCACCAAGACAACTGTGAGGAT...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCATGAGGCGAGTAGCTaGAATGCGATAAAATGCTCT +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFHEASS*NAIKCS
Trigger: AGAGCATTTTATCGCATTCAAGCTACTCGCCTCATG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATACACTGATATGTCCCTaGTTCAAAGAAGATCTTACT +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDTLICP*FKEDLT
Trigger: AGTAAGATCTTCTTTGAACAAGGGACATATCAGTGT...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGAATCAGACCCAGCATTaGCTGTGCCATCCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQNQTQH*LCHPLF
Trigger: GAACAGAGGATGGCACAGCAAATGCTGGGTCTGATT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTGGTCAGTGGCTGCTaGTCATCATATTCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLVSGC*SSYSSA
Trigger: TGCAGACGAATATGATGACAAGCAGCCACTGACCAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403092.5
ENST00000405901.7
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGTCTTCTTAATGAGTTaGTCCACAGTACTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDVFLMS*STVLLN
Trigger: ATTCAAGAGTACTGTGGACAAACTCATTAAGAAGAC...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTCTTAATCGCCGCATGTaGTACATGACACTTCCAACT +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFLNRRM*YMTLPT
Trigger: AGTTGGAAGTGTCATGTACAACATGCGGCGATTAAG...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
CDS-3UTR CAA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTGGTTATTCTTACTGTTaGCATAGGGGATGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SISRGDNTFKGPLVTLASGYSYC*HRGWQV
Trigger: CACCTGCCATCCCCTATGCAAACAGTAAGAATAACC...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATGTAATACCAGCACTTaGGGAAGCCAGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLICNTST*GSQGRR
Trigger: CCGCCTGCCCTGGCTTCCCAAAGTGCTGGTATTACA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTGTCAGAATATTCTCTaGGAAGAAAAGGATGCAAGT +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDCQNIL*EEKDAS
Trigger: ACTTGCATCCTTTTCTTCCAAGAGAATATTCTGACA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTCCATGGATCTGATGTaGAGTCGTGGAGGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDSMDLM*SRGGFK
Trigger: CTTGAAGCCTCCACGACTCAACATCAGATCCATGGA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATTTAGAGGAAAGTTTCTaGATAGGTTTCAAAATGGCC +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDLEESF*IGFKMA
Trigger: GGCCATTTTGAAACCTATCAAGAAACTTTCCTCTAA...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTAAACTTACACAGGTCTaGGCTCATGGTAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAKLTQV*AHGNLW
Trigger: CCAGAGATTACCATGAGCCAAGACCTGTGTAAGTTT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTGTGGTTACATGGGCTaGACAAGTGCATTGGTGACC +
Preference number: 5 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGCGYMG*TSALVT
Trigger: GGTCACCAATGCACTTGTCAAGCCCATGTAACCACA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGCTATGTTTCGTCTGTaGTGCAATTTCATTTTGCTA +
Preference number: 5 (lower is better)
Translates to: PCLHALLNMMMPLGMGGDAMFRL*CNFILL
Trigger: TAGCAAAATGAAATTGCACAACAGACGAAACATAGC...ATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAGATGGCCCTGCCTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGAAGCTGAAATAGTTTaGCCGTTTCCAATGACATTC +
Preference number: 5 (lower is better)
Translates to: QRWPCLHALLNMMMPLGMEAEIV*PFPMTF
Trigger: GAATGTCATTGGAAACGGCAAAACTATTTCAGCTTC...CATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAGGCAGGGCCATCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGACAGCTCTACCAAGATaGCTTAAGGCAGACATCCGC +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQTALPR*LKADIR
Trigger: GCGGATGTCTGCCTTAAGCAATCTTGGTAGAGCTGT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAAAGCAGTGGGTGACATaGTTCATTCTTGGCCACTCA +
Preference number: 5 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSKQWVT*FILGHS
Trigger: TGAGTGGCCAAGAATGAACAATGTCACCCACTGCTT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS GCA 90 bp CAACTCCTTCAGCACTTTGCTCAGTTGCAGTGGAGTGATCTTTCTTaGTCAGCCTTGTACTTCAGCATAGGTGTTCTAGACCATGACATC +
Preference number: 5 (lower is better)
Translates to: QLLQHFAQLQWSDLS*SALYFSIGVLDHDI
Trigger: GATGTCATGGTCTAGAACACCTATGCTGAAGTACAAGGCTGAGCAAGAAAGATCACTCCACTGCAACTGAGCAAAGTGCTGAAGGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417271.1
CDS CCA 90 bp TCTGAGGCCGAATCTGATGCAGACTCTCCCGTTGTAGGTCTCAAATaGGGCTCCAAATTAGTATTTTTAAAACACCAGTTGCTATCGGCC +
Preference number: 5 (lower is better)
Translates to: SEAESDADSPVVGLK*GSKLVFLKHQLLSA
Trigger: GGCCGATAGCAACTGGTGTTTTAAAAATACTAATTTGGAGCCCCATTTGAGACCTACAACGGGAGAGTCTGCATCAGATTCGGCCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448531.1
ENST00000455476.5
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTACAGATGAAATCCCATaGAAAAGGTGGGTGAAAGAC +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFTDEIP*KRWVKD
Trigger: GTCTTTCACCCACCTTTTCAATGGGATTTCATCTGT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAATCATCCCCCTCTGCTaGCCAGCTCGATACCTCTTG +
Preference number: 5 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIIIPLC*PARYLL
Trigger: CAAGAGGTATCGAGCTGGCAAGCAGAGGGGGATGAT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGTGCCTCTTTAAAATGTaGCCAGCTCCAGTCATGAGG +
Preference number: 5 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGCLFKM*PAPVMR
Trigger: CCTCATGACTGGAGCTGGCAACATTTTAAAGAGGCA...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTGGTCAGTGGCTGCTaGTCATCATATTCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLVSGC*SSYSSV
Trigger: AACAGACGAATATGATGACAAGCAGCCACTGACCAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTCTGCAGTGCTTTCCTTaGGGAGTTCCACCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPLQCFP*GVPPLS
Trigger: ACTGAGAGGTGGAACTCCCAAAGGAAAGCACTGCAG...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGAATACGTACCATTTCTaGTGGGCTGGAAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGNTYHF*WAGNLQ
Trigger: CTGCAGGTTTCCAGCCCACAAGAAATGGTACGTATT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAGTACATTTGGACATCTaGACAGGCAGGGAAAAAGTC +
Preference number: 5 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSVHLDI*TGREKV
Trigger: GACTTTTTCCCTGCCTGTCAAGATGTCCAAATGTAC...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp ATGTGGTTACATGGGCTTGACAAGTGCATTGGTGACCCAATATGGGCAGCAGCTATAGACAAGACAATTTaGGGCAAGCAAGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: MWLHGLDKCIGDPIWAAAIDKTI*GKQVFL
Trigger: CAGGAAGACTTGCTTGCCCAAAATTGTCTTGTCTAT...AGCTGCTGCCCATATTGGGTCACCAATGCACTTGTCAAGCCCATGTAACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACAGGAGAGGCAGTGGTaGGGCGCTGATGTGTTAATG +
Preference number: 5 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIQERQW*GADVLM
Trigger: CATTAACACATCAGCGCCCAACCACTGCCTCTCCTG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS TCA 90 bp CCATTGAAAAGGTGGGTGAAAGACTTAATCGCCGCATGTTGTACATaGCACTTCCAACTGTCACAACCTACTGGTTTGGGGAGTGTGAAT +
Preference number: 5 (lower is better)
Translates to: PLKRWVKDLIAACCT*HFQLSQPTGLGSVN
Trigger: ATTCACACTCCCCAAACCAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCTTTTCAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS TCA 90 bp TCTGCAATGGTGATTACAGTAGAGAGAATCGGATGTTCTCTAGCATaGACCTTCCTGAAGACAGGTTGGCCTGTTATTGTGAAGCCACCA +
Preference number: 5 (lower is better)
Translates to: SAMVITVERIGCSLA*TFLKTGWPVIVKPP
Trigger: TGGTGGCTTCACAATAACAGGCCAACCTGTCTTCAGGAAGGTTCATGCTAGAGAACATCCGATTCTCTCTACTGTAATCACCATTGCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405901.7
CDS TCA 90 bp CCATTGAAAAGGTGGGTGAAAGACTTAATCGCCGCATGTTGTACATaGCACTTCCAACTGTCACAACCTACTGGGAATGTAGTCAGATGC +
Preference number: 5 (lower is better)
Translates to: PLKRWVKDLIAACCT*HFQLSQPTGNVVRC
Trigger: GCATCTGACTACATTCCCAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCTTTTCAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448531.1
ENST00000455476.5
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGTAGCTCTAGCAATTTaGTCCCCAAAAGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQVALAI*SPKEGS
Trigger: AGACCCTTCTTTTGGGGACAAAATTGCTAGAGCTAC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCATGAGGCGAGTAGCTaGAATGCGATAAAATGCTCT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQHEASS*NAIKCS
Trigger: AGAGCATTTTATCGCATTCAAGCTACTCGCCTCATG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTCAGTCACTTCAGTGTaGACCTCGTGCATGCTGACA +
Preference number: 5 (lower is better)
Translates to: RYHNNISERHMKKEQMFSSVTSV*TSCMLT
Trigger: TGTCAGCATGCACGAGGTCAACACTGAAGTGACTGA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTGAAGATACTTTGACATaGCTGAGATGCACAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFEDTLT*LRCTRK
Trigger: TTTCCTTGTGCATCTCAGCAATGTCAAAGTATCTTC...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGCCCTGCCTCCATGCCTaGTTGAACATGATGATGCCC +
Preference number: 5 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLPCLHA*LNMMMP
Trigger: GGGCATCATCATGTTCAACAAGGCATGGAGGCAGGG...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCTTAATCGCCGCATGTaGTACATGACACTTCCAACT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQLNRRM*YMTLPT
Trigger: AGTTGGAAGTGTCATGTACAACATGCGGCGATTAAG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTAATTTTTCTGAAAGGTaGTTAGACGGTCAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFNFSER*LDGQGA
Trigger: AGCTCCTTGACCGTCTAACAACCTTTCAGAAAAATT...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CTCCATGCCTTGTTGAACATGATGATGCCCCTGGGAATGGGAGGTGATGGTTTTTCTCACCATGTACAGTaGTTTCTGAAGAATGTGTCT +
Preference number: 5 (lower is better)
Translates to: LHALLNMMMPLGMGGDGFSHHVQ*FLKNVS
Trigger: AGACACATTCTTCAGAAACAACTGTACATGGTGAGA...AAAACCATCACCTCCCATTCCCAGGGGCATCATCATGTTCAACAAGGCATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AAGGATTTATCAACCTGGAGAGAGTGCAGCCCTTCTAGACTGAGCTGCAAAGATTTCCTTTCTTTGCCCTaGTCCAGGAAGTTACCAATG +
Preference number: 5 (lower is better)
Translates to: KDLSTWRECSPSRLSCKDFLSLP*SRKLPM
Trigger: CATTGGTAACTTCCTGGACAAGGGCAAAGAAAGGAA...ATCTTTGCAGCTCAGTCTAGAAGGGCTGCACTCTCTCCAGGTTGATAAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTCAGTGGGAAACACAATaGCCATCAGTAACCATCAAA +
Preference number: 5 (lower is better)
Translates to: SISRGDNTFKGPLVTLASQWETQ*PSVTIK
Trigger: TTTGATGGTTACTGATGGCAATTGTGTTTCCCACTG...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS TCA 90 bp GTTCTCAATACTTTCACCTCCATGATGCCAATGCTCTCACTCACATaGGTCACAGGTTCCTCAAAAGTAAAAATGCCTGCGTGGTCATCA +
Preference number: 5 (lower is better)
Translates to: VLNTFTSMMPMLSLT*VTGSSKVKMPAWSS
Trigger: TGATGACCACGCAGGCATTTTTACTTTTGAGGAACCTGTGACTCATGTGAGTGAGAGCATTGGCATCATGGAGGTGAAAGTATTGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS TCA 90 bp TTCTTCCTTTCAACTCCTTCAGCACTTTGCTCAGTTGCAGTGGAGTaGTCTTTCTTGCTCAGCCTTGTACTTCAGCATAGGTGTTCTAGA +
Preference number: 5 (lower is better)
Translates to: FFLSTPSALCSVAVE*SFLLSLVLQHRCSR
Trigger: TCTAGAACACCTATGCTGAAGTACAAGGCTGAGCAAGAAAGATCACTCCACTGCAACTGAGCAAAGTGCTGAAGGAGTTGAAAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417271.1
CDS CCA 90 bp AGAATTGACCACTTTCCCGTCCATTTCAATTTCAGTCTTAGAAGATaGCCTGTCTCCTTCATGTTCAATAATCATCCCCCTCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: RIDHFPVHFNFSLRR*PVSFMFNNHPPLLA
Trigger: GGCAAGCAGAGGGGGATGATTATTGAACATGAAGGAGACAGGCCATCTTCTAAGACTGAAATTGAAATGGACGGGAAAGTGGTCAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGACAGATGAAATCCCATaGAAAAGGTGGGTGAAAGAC +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQTDEIP*KRWVKD
Trigger: GTCTTTCACCCACCTTTTCAATGGGATTTCATCTGT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGCTACTGTATACATCATCTGTGGTTTTCAAGCTTCTTGAGCCTTGTGAGTCTTATCCTCACAGTTGTCTaGGTGGTCTCTCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: SYCIHHLWFSSFLSLVSLILTVV*VVSPLG
Trigger: ACCCAATGGAGAGACCACCAAGACAACTGTGAGGAT...AAGACTCACAAGGCTCAAGAAGCTTGAAAACCACAGATGATGTATACAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCATCATCCCCCTCTGCTaGCCAGCTCGATACCTCTTG +
Preference number: 5 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTIIPLC*PARYLL
Trigger: CAAGAGGTATCGAGCTGGCAAGCAGAGGGGGATGAT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGCTTCAGAAGATACTTaGACATTGCTGAGATGCACA +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQASEDT*TLLRCT
Trigger: TGTGCATCTCAGCAATGTCAAAGTATCTTCTGAAGC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTAGCAGCACCCCCACATaGATGAAAGCAAAAATGGTG +
Preference number: 5 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPSSTPT*MKAKMV
Trigger: CACCATTTTTGCTTTCATCAATGTGGGGGTGCTGCT...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTCTTTTATGCTTCTTCTaGGAGGCAGCTTCACCTCCA +
Preference number: 5 (lower is better)
Translates to: RYHNNISERHMKKEQMFSLLCFF*EAASPP
Trigger: TGGAGGTGAAGCTGCCTCCAAGAAGAAGCATAAAAG...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAAATGTCCAATCAACATaGCCAAATGGGAGAACAGTA +
Preference number: 5 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSNVQST*PNGRTV
Trigger: TACTGTTCTCCCATTTGGCAATGTTGATTGGACATT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGCCCACAGAGAAGCATTaGACCCACTCATATTTCTTA +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQPTEKH*THSYFL
Trigger: TAAGAAATATGAGTGGGTCAAATGCTTCTCTGTGGG...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGAAATATCTGACAAGTTaGGTTTCTCCTAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGKYLTS*VSPKGG
Trigger: GCCTCCCTTAGGAGAAACCAAACTTGTCAGATATTT...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGCCTTTTCTTTATGGATaGACTATTGTGCTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGPFLYG*TIVLAR
Trigger: CCGAGCAAGCACAATAGTCAATCCATAAAGAAAAGG...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCAATGGCTGAGTGTACATaGAATCACAGAGTCAACAAA +
Preference number: 5 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSMAECT*NHRVNK
Trigger: TTTGTTGACTCTGTGATTCAATGTACACTCAGCCAT...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS TCA 90 bp TCTGCAATGGTGATTACAGTAGAGAGAATCGGATGTTCTCTAGCATaGACCTTCCTGAAGACAGGTTGGCCAAACAGGTATTTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SAMVITVERIGCSLA*TFLKTGWPNRYFPV
Trigger: AACAGGAAAATACCTGTTTGGCCAACCTGTCTTCAGGAAGGTTCATGCTAGAGAACATCCGATTCTCTCTACTGTAATCACCATTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332839.8
ENST00000403092.5
ENST00000408028.6
CDS-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGAATCAGACCCAGCATTaGCTGTGCCATCCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLNQTQH*LCHPLF
Trigger: GAACAGAGGATGGCACAGCAAATGCTGGGTCTGATT...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGAAGATACTTTGACATaGCTGAGATGCACAAGGAAA +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQEDTLT*LRCTRK
Trigger: TTTCCTTGTGCATCTCAGCAATGTCAAAGTATCTTC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGCATAAGTAGAGGAGACAACACTTTTAAAGGCCCGTTGGTCACCCTGGCTTCTGTCTTCTTAATGAGTTaGTCCACAGTACTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SISRGDNTFKGPLVTLASVFLMS*STVLLN
Trigger: ATTCAAGAGTACTGTGGACAAACTCATTAAGAAGAC...AGAAGCCAGGGTGACCAACGGGCCTTTAAAAGTGTTGTCTCCTCTACTTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATACTGGTCAGTGGCTGCTaGTCATCATATTCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLILVSGC*SSYSSV
Trigger: AACAGACGAATATGATGACAAGCAGCCACTGACCAG...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATATCACAACCTACTGGTTaGGGGAGTGTGAATGGATTC +
Preference number: 5 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLISQPTG*GSVNGF
Trigger: GAATCCATTCACACTCCCCAAACCAGTAGGTTGTGA...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTCTAGGCACGTTTTCCTaGTACCTGTTAAACGAGACT +
Preference number: 5 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPLGTFS*YLLNET
Trigger: AGTCTCGTTTAACAGGTACAAGGAAAACGTGCCTAG...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTGAGCATGCATCAGAACCATCCTAGGGGCTTATTAAAGTCCATATTGCCAGGGGTCACTCCAAAATTTTaGATTCATAGATCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LSMHQNHPRGLLKSILPGVTPKF*IHRSGL
Trigger: CAGCCCAGATCTATGAATCAAAAATTTTGGAGTGAC...CCCTGGCAATATGGACTTTAATAAGCCCCTAGGATGGTTCTGATGCATGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGAAGAGTCACTGGTAGAACCAACTGCTCACAGCTTCTTTGGGTGCTAGACTCACTATTCTTCCCTTTTTaGCCCTGTATAGGAAATTCA +
Preference number: 5 (lower is better)
Translates to: RRVTGRTNCSQLLWVLDSLFFPF*PCIGNS
Trigger: TGAATTTCCTATACAGGGCAAAAAAGGGAAGAATAG...TGAGTCTAGCACCCAAAGAAGCTGTGAGCAGTTGGTTCTACCAGTGACTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS TCA 90 bp ACATGGTCCACATGGGAAAATAAGAGACTCACAGTAACTAACAGATaGAATCCCATTGAAAAGGTGGGTGAAAGACTTAATCGCCGCATG +
Preference number: 5 (lower is better)
Translates to: TWSTWENKRLTVTNR*NPIEKVGERLNRRM
Trigger: CATGCGGCGATTAAGTCTTTCACCCACCTTTTCAATGGGATTTCATCTGTTAGTTACTGTGAGTCTCTTATTTTCCCATGTGGACCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000408028.6
ENST00000417271.1
ENST00000448531.1
ENST00000455476.5
CDS TCA 90 bp GCAAGCAAGTGTAGAAACATGATTGGCTTCCAGTATGCCATCTTCTaGAGCTTCAGAAGATACTTTGACATTGCTGAGATGCACAAGGAA +
Preference number: 5 (lower is better)
Translates to: ASKCRNMIGFQYAIF*SFRRYFDIAEMHKE
Trigger: TTCCTTGTGCATCTCAGCAATGTCAAAGTATCTTCTGAAGCTTCAGAAGATGGCATACTGGAAGCCAATCATGTTTCTACACTTGCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGACACTGATATGTCCCTaGTTCAAAGAAGATCTTACT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQTLICP*FKEDLT
Trigger: AGTAAGATCTTCTTTGAACAAGGGACATATCAGTGT...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGGTCTTCTTAATGAGTTaGTCCACAGTACTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQVFLMS*STVLLN
Trigger: ATTCAAGAGTACTGTGGACAAACTCATTAAGAAGAC...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403092.5
ENST00000405901.7
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCATGACTGGAACAGGATaGTGCAAGCCATGGATGCCT +
Preference number: 5 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTMTGTG*CKPWMP
Trigger: AGGCATCCATGGCTTGCACAATCCTGTTCCAGTCAT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCACTTTTAAAGGCCCGTaGGTCACCCTGGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTTFKGP*VTLASF
Trigger: GAAAGAAGCCAGGGTGACCAACGGGCCTTTAAAAGT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTCTTTCTGCCTGGTCATaGCACATCCTGTTTGTAATT +
Preference number: 5 (lower is better)
Translates to: RYHNNISERHMKKEQMFSLSAWS*HILFVI
Trigger: AATTACAAACAGGATGTGCAATGACCAGGCAGAAAG...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp TTTTACTTCGGCCCTAGTACAGAGTATGCTCTTGAAGCTGGATTCCATCAGCAGTGGAGATTACATTCATaGGCAGCAAAGAATAGAAAC +
Preference number: 5 (lower is better)
Translates to: FYFGPSTEYALEAGFHQQWRLHS*AAKNRN
Trigger: GTTTCTATTCTTTGCTGCCAATGAATGTAATCTCCA...CTGCTGATGGAATCCAGCTTCAAGAGCATACTCTGTACTAGGGCCGAAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS CCA 90 bp GTCTGTTATTGTGAAGCCACCTTTCATTCCTCTTCTTATCCATTTTaGTTCCTCAAGCACAAGGGAGAAACTGCACTCTTTCTCATATTC +
Preference number: 5 (lower is better)
Translates to: VCYCEATFHSSSYPF*FLKHKGETALFLIF
Trigger: GAATATGAGAAAGAGTGCAGTTTCTCCCTTGTGCTTGAGGAACCAAAATGGATAAGAAGAGGAATGAAAGGTGGCTTCACAATAACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402441.5
ENST00000405269.5
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
CDS CCA 90 bp TCCTGTTATTGTGAAGCCACCTTTCATTCCTCTTCTTATCCATTTTaGTTCCTCAAGCACAAGGGAGAAACTGCACTCTTTCTCATATTC +
Preference number: 5 (lower is better)
Translates to: SCYCEATFHSSSYPF*FLKHKGETALFLIF
Trigger: GAATATGAGAAAGAGTGCAGTTTCTCCCTTGTGCTTGAGGAACCAAAATGGATAAGAAGAGGAATGAAAGGTGGCTTCACAATAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408028.6
CDS-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAGCTTCAGAAGATACTTaGACATTGCTGAGATGCACA +
Preference number: 5 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLIASEDT*TLLRCT
Trigger: TGTGCATCTCAGCAATGTCAAAGTATCTTCTGAAGC...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTGTAGTTTCCAATAACTaGGTATTGACATTACTGCCC +
Preference number: 5 (lower is better)
Translates to: RYHNNISERHMKKEQMFSVVSNN*VLTLLP
Trigger: GGGCAGTAATGTCAATACCAAGTTATTGGAAACTAC...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTTTGTGCAATTTCATTTaGCTAATGAGGCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPLCNFI*LMRHLS
Trigger: GCTCAGATGCCTCATTAGCAAAATGAAATTGCACAA...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTTCTAGCATTATGCAGTaGATCCAAGTCATTGTACCT +
Preference number: 5 (lower is better)
Translates to: RYHNNISERHMKKEQMFSSSIMQ*IQVIVP
Trigger: AGGTACAATGACTTGGATCAACTGCATAATGCTAGA...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS TCA 90 bp TCATCCACCTCCAGAACCAGAGCACCATCTAAGAAATTTTCAACATaGGAATTGACCACTTTCCCGTCCATTTCAATTTCAGTCTTAGAA +
Preference number: 5 (lower is better)
Translates to: SSTSRTRAPSKKFST*ELTTFPSISISVLE
Trigger: TTCTAAGACTGAAATTGAAATGGACGGGAAAGTGGTCAATTCTCATGTTGAAAATTTCTTAGATGGTGCTCTGGTTCTGGAGGTGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS CCA 90 bp TCCTCAAAGATATCATCATCTATGATACCCACTCTGATTTCCTTCTaGGTATCACCAGGCTTAAACACCACAGTTCCTTCAGTAAATTCA +
Preference number: 5 (lower is better)
Translates to: SSKISSSMIPTLISF*VSPGLNTTVPSVNS
Trigger: TGAATTTACTGAAGGAACTGTGGTGTTTAAGCCTGGTGATACCCAGAAGGAAATCAGAGTGGGTATCATAGATGATGATATCTTTGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGCTTCAGAAGATACTTaGACATTGCTGAGATGCACA +
Preference number: 5 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLASEDT*TLLRCT
Trigger: TGTGCATCTCAGCAATGTCAAAGTATCTTCTGAAGC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTCACTACTTTGGAATGTaGGGTTTATCCATGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RYHNNISERHMKKEQMFSHYFGM*GLSMFF
Trigger: AAAGAACATGGATAAACCCAACATTCCAAAGTAGTG...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AGGTATCACAACAACATTTCCGAACGGCACATGAAGAAGGAGCAAATGTTCAGTAAAAAGGTCACTGATTaGGAATCCATTCCAATCTCA +
Preference number: 5 (lower is better)
Translates to: RYHNNISERHMKKEQMFSKKVTD*ESIPIS
Trigger: TGAGATTGGAATGGATTCCAAATCAGTGACCTTTTT...ACTGAACATTTGCTCCTTCTTCATGTGCCGTTCGGAAATGTTGTTGTGATACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGCTAACAAATTTCCAGTaGCTGATGCTGCTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLLTNFQ*LMLLVW
Trigger: CCAAACAAGCAGCATCAGCAACTGGAAATTTGTTAG...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTATCCATTCAAAGTGCTaGAAAGGGAATGTTTTGATG +
Preference number: 5 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPIHSKC*KGNVLM
Trigger: CATCAAAACATTCCCTTTCAAGCACTTTGAATGGAT...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp ATTCAGTGGGAAACACAATTGCCATCAGTAACCATCAAAGGCAAGAGAAGTCCTAATTCTGAGAGTTGGTaGTACATAACCTCAGGAATT +
Preference number: 5 (lower is better)
Translates to: IQWETQLPSVTIKGKRSPNSESW*YITSGI
Trigger: AATTCCTGAGGTTATGTACAACCAACTCTCAGAATT...AGGACTTCTCTTGCCTTTGATGGTTACTGATGGCAATTGTGTTTCCCACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGGAAGATACTTTGACATaGCTGAGATGCACAAGGAAA +
Preference number: 5 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLEDTLT*LRCTRK
Trigger: TTTCCTTGTGCATCTCAGCAATGTCAAAGTATCTTC...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp AACTTGGTATTGACATTACTGCCCCTTCTGCAATCTCACTCCTTACTCTTGATAACGATGATGTGCTTTTaGAATGGGGTTATTCTTACT +
Preference number: 5 (lower is better)
Translates to: NLVLTLLPLLQSHSLLLITMMCF*NGVILT
Trigger: AGTAAGAATAACCCCATTCAAAAAGCACATCATCGT...TATCAAGAGTAAGGAGTGAGATTGCAGAAGGGGCAGTAATGTCAATACCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGATGGCAGTAAAAACCTaGTTCTCCTTAGAGTTTTGG +
Preference number: 5 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLMAVKT*FSLEFW
Trigger: CCAAAACTCTAAGGAGAACAAGGTTTTTACTGCCAT...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp AACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCCTGACACTGATATGTCCCTaGTTCAAAGAAGATCTTACT +
Preference number: 5 (lower is better)
Translates to: NPFTFGWFHFPQRKATTLTLICP*FKEDLT
Trigger: AGTAAGATCTTCTTTGAACAAGGGACATATCAGTGT...CAGGGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406785.6
ENST00000407929.6
CDS-3UTR CAA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCTCAAGATTTCAAGGCTaGAGCCAATACAGAAACCAT +
Preference number: 5 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTSRFQG*SQYRNH
Trigger: ATGGTTTCTGTATTGGCTCAAGCCTTGAAATCTTGA...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS-3UTR CAA 90 bp CAAAACCCATTTACATTTGGATGGTTTCACTTTCCACAAAGAAAAGCAACAACCAGAGATGCTTACCCTTaGAAATCACATATAACGATG +
Preference number: 5 (lower is better)
Translates to: QNPFTFGWFHFPQRKATTRDAYP*KSHITM
Trigger: CATCGTTATATGTGATTTCAAAGGGTAAGCATCTCT...GGTTGTTGCTTTTCTTTGTGGAAAGTGAAACCATCCAAATGTAAATGGGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS CCA 72 bp AGGCTGTGCGAGCAGCATGGTGCTAGAATCTGCTTCTaGAGAGGCCTCAGGAAACTTACAGTCACAGCAGAA +
Preference number: 6 (lower is better)
Translates to: RLCEQHGARICF*RGLRKLTVTAE
Trigger: TTCTGCTGTGACTGTAAGTTTCCTGAGGCCTCTCCAGAAGCAGATTCTAGCACCATGCTGCTCGCACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405269.5
CDS GCA 72 bp TGCATGCTGACAGCCTTCCTTGCTTGGTCAGCTGCATaGCTCTTTAAAATGTTGCCAGCTCCAGTCATGAGG +
Preference number: 6 (lower is better)
Translates to: CMLTAFLAWSAA*LFKMLPAPVMR
Trigger: CCTCATGACTGGAGCTGGCAACATTTTAAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGTCAGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS GCA 72 bp ACAGGGTCATTTTCAGTCACTTCAGTGTTGACCTCGTaGATGCTGACAGCCTTCCTTGCTTGGTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: TGSFSVTSVLTS*MLTAFLAWSAA
Trigger: TGCAGCTGACCAAGCAAGGAAGGCTGTCAGCATGCACGAGGTCAACACTGAAGTGACTGAAAATGACCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS CCA 72 bp GTGTTGACCTCGTGCATGCTGACAGCCTTCCTTGCTTaGTCAGCTGCATGCCTCTTTAAAATGTTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: VLTSCMLTAFLA*SAACLFKMLPA
Trigger: AGCTGGCAACATTTTAAAGAGGCATGCAGCTGACCAAGCAAGGAAGGCTGTCAGCATGCACGAGGTCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS TCA 72 bp GTGGAGGGAGATCCGAGGCAAGCAAGTGTAGAAACATaGTTGGCTTCCAGTATGCCATCTTCTGAAGCTTCA +
Preference number: 6 (lower is better)
Translates to: VEGDPRQASVET*LASSMPSSEAS
Trigger: TGAAGCTTCAGAAGATGGCATACTGGAAGCCAATCATGTTTCTACACTTGCTTGCCTCGGATCTCCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS TCA 72 bp AGGTGGGTGAAAGACTTAATCGCCGCATGTTGTACATaGCACTTCCAACTGTCACAACCTACTGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: RWVKDLIAACCT*HFQLSQPTGLG
Trigger: CCCCAAACCAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406785.6
CDS GCA 72 bp ATGCGCCTCTCCTCTTCCTCTTTGCTGGTCAGTGGCTaGTTGTCATCATATTCGTCTGCAATGGTGATTACA +
Preference number: 6 (lower is better)
Translates to: MRLSSSSLLVSG*LSSYSSAMVIT
Trigger: TGTAATCACCATTGCAGACGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGGAGAGGCGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332839.8
ENST00000403092.5
ENST00000405901.7
ENST00000408028.6
CDS CCA 72 bp CCCTCCACCTCTGGCAGTCCCTTCGATGGTTTTATATaGAACGATAACATTTCCTCGAGCTCCAGATGTTCT +
Preference number: 6 (lower is better)
Translates to: PSTSGSPFDGFI*NDNISSSSRCS
Trigger: AGAACATCTGGAGCTCGAGGAAATGTTATCGTTCCATATAAAACCATCGAAGGGACTGCCAGAGGTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS CAA 72 bp CGCCTCTCCTCTTCCTCTTTGCTGGTCAGTGGCTGCTaGTCATCATATTCGTCTGCAATGGTGATTACAGTA +
Preference number: 6 (lower is better)
Translates to: RLSSSSLLVSGC*SSYSSAMVITV
Trigger: TACTGTAATCACCATTGCAGACGAATATGATGACAAGCAGCCACTGACCAGCAAAGAGGAAGAGGAGAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332839.8
ENST00000403092.5
ENST00000405901.7
ENST00000408028.6
CDS CAA 90 bp CAGCACTTTGCTCAGTTGCAGTGGAGTGATCTTTCTTGCTCAGCCTaGTACTTCAGCATAGGTGTTCTAGACCATGACATCCCTGGTTTG +
Preference number: 6 (lower is better)
Translates to: QHFAQLQWSDLSCSA*YFSIGVLDHDIPGL
Trigger: CAAACCAGGGATGTCATGGTCTAGAACACCTATGCTGAAGTACAAGGCTGAGCAAGAAAGATCACTCCACTGCAACTGAGCAAAGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417271.1
CDS CAA 90 bp TCAAAGAAGATCTTACTAACAGGGTCATTTTCAGTCACTTCAGTGTaGACCTCGTGCATGCTGACAGCCTTCCTTGCTTGGTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: SKKILLTGSFSVTSV*TSCMLTAFLAWSAA
Trigger: TGCAGCTGACCAAGCAAGGAAGGCTGTCAGCATGCACGAGGTCAACACTGAAGTGACTGAAAATGACCCTGTTAGTAAGATCTTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS TCA 72 bp AGGTGGGTGAAAGACTTAATCGCCGCATGTTGTACATaGCACTTCCAACTGTCACAACCTACTCTGTCAAGC +
Preference number: 6 (lower is better)
Translates to: RWVKDLIAACCT*HFQLSQPTLSS
Trigger: GCTTGACAGAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402441.5
CDS GCA 72 bp CAGCACTTTGCTCAGTTGCAGTGGAGTGATCTTTCTTaGTCAGCCTTGTACTTCAGCATAGGTGTTCTAGAC +
Preference number: 6 (lower is better)
Translates to: QHFAQLQWSDLS*SALYFSIGVLD
Trigger: GTCTAGAACACCTATGCTGAAGTACAAGGCTGAGCAAGAAAGATCACTCCACTGCAACTGAGCAAAGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417271.1
CDS CAA 72 bp ATCTTACTAACAGGGTCATTTTCAGTCACTTCAGTGTaGACCTCGTGCATGCTGACAGCCTTCCTTGCTTGG +
Preference number: 6 (lower is better)
Translates to: ILLTGSFSVTSV*TSCMLTAFLAW
Trigger: CCAAGCAAGGAAGGCTGTCAGCATGCACGAGGTCAACACTGAAGTGACTGAAAATGACCCTGTTAGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS CAA 72 bp CGGATGTTCTCTAGCATGAACCTTCCTGAAGACAGGTaGGCCTGTTATTGTGAAGCCACCAAGCTCATTCAA +
Preference number: 6 (lower is better)
Translates to: RMFSSMNLPEDR*ACYCEATKLIQ
Trigger: TTGAATGAGCTTGGTGGCTTCACAATAACAGGCCAACCTGTCTTCAGGAAGGTTCATGCTAGAGAACATCCG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405901.7
CDS CAA 90 bp AACCACGTCCAATGTTCTCTTCTTCCTTTCAACTCCTTCAGCACTTaGCTCAGTTGCAGTGGAGTGATCTTTCTTGCTCAGCCTTGTACT +
Preference number: 6 (lower is better)
Translates to: NHVQCSLLPFNSFST*LSCSGVIFLAQPCT
Trigger: AGTACAAGGCTGAGCAAGAAAGATCACTCCACTGCAACTGAGCAAAGTGCTGAAGGAGTTGAAAGGAAGAAGAGAACATTGGACGTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417271.1
CDS TCA 72 bp AGGTGGGTGAAAGACTTAATCGCCGCATGTTGTACATaGCACTTCCAACTGTCACAACCTACTGGGAATGTA +
Preference number: 6 (lower is better)
Translates to: RWVKDLIAACCT*HFQLSQPTGNV
Trigger: TACATTCCCAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448531.1
ENST00000455476.5
CDS CAA 90 bp CCAATGTTCTCTTCTTCCTTTCAACTCCTTCAGCACTTTGCTCAGTaGCAGTGGAGTGATCTTTCTTGCTCAGCCTTGTACTTCAGCATA +
Preference number: 6 (lower is better)
Translates to: PMFSSSFQLLQHFAQ*QWSDLSCSALYFSI
Trigger: TATGCTGAAGTACAAGGCTGAGCAAGAAAGATCACTCCACTGCAACTGAGCAAAGTGCTGAAGGAGTTGAAAGGAAGAAGAGAACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417271.1
CDS TCA 72 bp GTGATTACAGTAGAGAGAATCGGATGTTCTCTAGCATaGACCTTCCTGAAGACAGGTTGGCCAAACAGGTAT +
Preference number: 6 (lower is better)
Translates to: VITVERIGCSLA*TFLKTGWPNRY
Trigger: ATACCTGTTTGGCCAACCTGTCTTCAGGAAGGTTCATGCTAGAGAACATCCGATTCTCTCTACTGTAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332839.8
ENST00000403092.5
ENST00000408028.6
CDS TCA 72 bp GTGATTACAGTAGAGAGAATCGGATGTTCTCTAGCATaGACCTTCCTGAAGACAGGTTGGCCTGTTATTGTG +
Preference number: 6 (lower is better)
Translates to: VITVERIGCSLA*TFLKTGWPVIV
Trigger: CACAATAACAGGCCAACCTGTCTTCAGGAAGGTTCATGCTAGAGAACATCCGATTCTCTCTACTGTAATCAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405901.7
CDS TCA 72 bp AGGTGGGTGAAAGACTTAATCGCCGCATGTTGTACATaGCACTTCCAACTGTCACAACCTACTTGTCGTAAA +
Preference number: 6 (lower is better)
Translates to: RWVKDLIAACCT*HFQLSQPTCRK
Trigger: TTTACGACAAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417271.1
CDS CAA 72 bp ATTGAAAAGGTGGGTGAAAGACTTAATCGCCGCATGTaGTACATGACACTTCCAACTGTCACAACCTCTGTC +
Preference number: 6 (lower is better)
Translates to: IEKVGERLNRRM*YMTLPTVTTSV
Trigger: GACAGAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCTTTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403092.5
CDS CAA 72 bp ATTGAAAAGGTGGGTGAAAGACTTAATCGCCGCATGTaGTACATGACACTTCCAACTGTCACAACCTACTGG +
Preference number: 6 (lower is better)
Translates to: IEKVGERLNRRM*YMTLPTVTTYW
Trigger: CCAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCTTTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406785.6
ENST00000448531.1
ENST00000455476.5
CDS TCA 72 bp AGACAGGTTGGCCAAACAGGTATTTTCCTGTTATTGTaGAGCCACCAAGCTCATTCAATAACAGGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: RQVGQTGIFLLL*SHQAHSITGLS
Trigger: AGAAAGCCCTGTTATTGAATGAGCTTGGTGGCTTCACAATAACAGGAAAATACCTGTTTGGCCAACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332839.8
ENST00000403092.5
CDS CAA 72 bp ATTGAAAAGGTGGGTGAAAGACTTAATCGCCGCATGTaGTACATGACACTTCCAACTGTCACAACCTACTCT +
Preference number: 6 (lower is better)
Translates to: IEKVGERLNRRM*YMTLPTVTTYS
Trigger: AGAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCTTTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402441.5
CDS CAA 72 bp ATTGAAAAGGTGGGTGAAAGACTTAATCGCCGCATGTaGTACATGACACTTCCAACTGTCACAACCTACTTG +
Preference number: 6 (lower is better)
Translates to: IEKVGERLNRRM*YMTLPTVTTYL
Trigger: CAAGTAGGTTGTGACAGTTGGAAGTGTCATGTACAACATGCGGCGATTAAGTCTTTCACCCACCTTTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417271.1
CDS CAA 90 bp GCTTCCAGTATGCCATCTTCTGAAGCTTCAGAAGATACTTTGACATaGCTGAGATGCACAAGGAAATTTTCATCCTCCTCAAAGATATCA +
Preference number: 6 (lower is better)
Translates to: ASSMPSSEASEDTLT*LRCTRKFSSSSKIS
Trigger: TGATATCTTTGAGGAGGATGAAAATTTCCTTGTGCATCTCAGCAATGTCAAAGTATCTTCTGAAGCTTCAGAAGATGGCATACTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6
CDS TCA 72 bp AGACAGGTTGGCCAAACAGGTATTTTCCTGTTATTGTaGAGCCACCTTTCATTCCTCTTCTTATCCATTTTG +
Preference number: 6 (lower is better)
Translates to: RQVGQTGIFLLL*SHLSFLFLSIL
Trigger: CAAAATGGATAAGAAGAGGAATGAAAGGTGGCTTCACAATAACAGGAAAATACCTGTTTGGCCAACCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408028.6
CDS CAA 72 bp ATGCCATCTTCTGAAGCTTCAGAAGATACTTTGACATaGCTGAGATGCACAAGGAAATTTTCATCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: MPSSEASEDTLT*LRCTRKFSSSS
Trigger: TGAGGAGGATGAAAATTTCCTTGTGCATCTCAGCAATGTCAAAGTATCTTCTGAAGCTTCAGAAGATGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332839.8
ENST00000402441.5
ENST00000403092.5
ENST00000405269.5
ENST00000405901.7
ENST00000406391.2
ENST00000406785.6
ENST00000407929.6
ENST00000408028.6