RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC7A6 (Homo sapiens)

Ensembl gene IDs: ENSG00000103064

Ensembl transcript IDs: ENST00000219343.11, ENST00000379152.7, ENST00000562727.1, ENST00000562863.1, ENST00000563080.1, ENST00000563146.1, ENST00000563208.1, ENST00000564708.1, ENST00000566454.5, ENST00000566579.5, ENST00000566834.5, ENST00000567346.5, ENST00000568024.1, ENST00000568088.5, ENST00000618043.4, ENST00000648130.1

Found 1216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTaGAGAAGGAGTTCGGCTATGACAGCCCCCACGACCTGGATTCAG +
Preference number: 1 (lower is better)
Translates to: EAAADSGCGASTLWM*RRSSAMTAPTTWIQ
Trigger: CTGAATCCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTaGATGTGCAGAAGGAGTTCGGCTATGACAGCCCCCACGACCTGG +
Preference number: 1 (lower is better)
Translates to: RKEAAADSGCGASTL*MCRRSSAMTAPTTW
Trigger: CCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 90 bp CAGAAGGAGTTCGGCTATGACAGCCCCCACGACCTGGATTCAGACTaGTGGTCTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAG +
Preference number: 1 (lower is better)
Translates to: QKEFGYDSPHDLDSD*WSCDVHEVLPHALE
Trigger: CTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAGACCATCAGTCTGAATCCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp ACCACAAGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTaGTGTGCCATACCACCAGGCTGCCTGCCTCTAGGAAAACCCTGT +
Preference number: 1 (lower is better)
Translates to: TTREGEVPISLAVSF*CAIPPGCLPLGKPC
Trigger: ACAGGGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCTTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 90 bp GAGTGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTaGGAGAAGTCTGTATCCAGCACAGAGGGGAAAAATGCTGTCACC +
Preference number: 1 (lower is better)
Translates to: ECCRDPLASLPKRGS*EKSVSSTEGKNAVT
Trigger: GGTGACAGCATTTTTCCCCTCTGTGCTGGATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 90 bp CTCTGGATGTGCAGAAGGAGTTCGGCTATGACAGCCCCCACGACCTaGATTCAGACTGATGGTCTTGTGATGTCCATGAGGTTCTGCCAC +
Preference number: 1 (lower is better)
Translates to: LWMCRRSSAMTAPTT*IQTDGLVMSMRFCH
Trigger: GTGGCAGAACCTCATGGACATCACAAGACCATCAGTCTGAATCCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTCTGCACATCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp AAGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTaGCATACCACCAGGCTGCCTGCCTCTAGGAAAACCCTGTTCCTT +
Preference number: 1 (lower is better)
Translates to: KGGGGSHFISSKLLL*HTTRLPASRKTLFL
Trigger: AAGGAACAGGGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp ACGACCTGGATTCAGACTGATGGTCTTGTGATGTCCATGAGGTTCTaGCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTG +
Preference number: 1 (lower is better)
Translates to: TTWIQTDGLVMSMRF*HMPLRALSPELTAL
Trigger: CAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAGACCATCAGTCTGAATCCAGGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp TTAATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTGACC +
Preference number: 1 (lower is better)
Translates to: LIQESWAHRVLLSGF*WLACLPGLRKPPLT
Trigger: GGTCAGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 90 bp GTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTTGTACAATCCAATGCAGCCGTCCTG +
Preference number: 1 (lower is better)
Translates to: VCQASRFFSAQDDSV*GHHKTVVQSNAAVL
Trigger: CAGGACGGCTGCATTGGATTGTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 90 bp GATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTaGCAGGTAAACACCCATGAAGTAGAAAGGGACTCCAGAAAGGGC +
Preference number: 1 (lower is better)
Translates to: DSSQDIPNKQWPPGL*QVNTHEVERDSRKG
Trigger: GCCCTTTCTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp GCAAGTCAGCCTTTGCATAAGACACCCTGTCGTCGGGCAGGAATTTaGCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCA +
Preference number: 1 (lower is better)
Translates to: ASQPLHKTPCRRAGI*RYKSQTHDSRNVTP
Trigger: TGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGACAGGGTGTCTTATGCAAAGGCTGACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 90 bp GACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAGGATAAGCCCATGGGGTATGTCAAG +
Preference number: 1 (lower is better)
Translates to: DWVEKNGQEGRLPHC*PIPKPKDKPMGYVK
Trigger: CTTGACATACCCCATGGGCTTATCCTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTCCAAAACCTAAGGATAAGCCCATGG +
Preference number: 1 (lower is better)
Translates to: PLSVTGWRRMVRKGD*LTVDQFQNLRISPW
Trigger: CCATGGGCTTATCCTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp CACATTTTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTaGCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCA +
Preference number: 1 (lower is better)
Translates to: HILLKGLAPEEPWDG*QLSSDRSHVLSVQA
Trigger: TGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp GACAACAAAGAGCTGGCAGAAATTAATTCCACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGG +
Preference number: 1 (lower is better)
Translates to: DNKELAEINSTMKLE*CRDPLASLPKRGSW
Trigger: CCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp GCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTCGGGCAGGAATTTGCCGTTACAAAT +
Preference number: 1 (lower is better)
Translates to: AQTEVMFLAFRQVSL*IRHPVVGQEFAVTN
Trigger: ATTTGTAACGGCAAATTCCTGCCCGACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 90 bp AAAGGCAAGCACATTTTGCTTAAAGGATTAGCTCCAGAGGAGCCCTaGGATGGGTGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGC +
Preference number: 1 (lower is better)
Translates to: KGKHILLKGLAPEEP*DGCQLSSDRSHVLS
Trigger: GCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAAAATGTGCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp TGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATaGTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACC +
Preference number: 1 (lower is better)
Translates to: CRYKSQTHDSRNVTP*FTYALCSEPRATMT
Trigger: GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 90 bp TCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTaGGCCCATGAGATGTTCTCCAAGCCATTGACAGCTGAGAGAATT +
Preference number: 1 (lower is better)
Translates to: SLTLPLQRGTGYLMT*AHEMFSKPLTAERI
Trigger: AATTCTCTCAGCTGTCAATGGCTTGGAGAACATCTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR TCA 90 bp TTAAGGAGACAGACAACAAAGAGCTGGCAGAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGA +
Preference number: 1 (lower is better)
Translates to: LRRQTTKSWQKLIPP*SLSAVGILWLRSQR
Trigger: TCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTGTCTCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 90 bp TTGAGCAAATATATGGCCAAGGTTATTCCCTTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAA +
Preference number: 1 (lower is better)
Translates to: LSKYMAKVIPLSVTG*RRMVRKGDCLTVDQ
Trigger: TTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGGAATAACCTTGGCCATATATTTGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp ACCCATGACAGTAGGAATGTCACCCCATGCTTCACATATGCATTATaGTCTGAACCCAGGGCAACTATGACCATGCTTCCTTCAATCTTT +
Preference number: 1 (lower is better)
Translates to: THDSRNVTPCFTYAL*SEPRATMTMLPSIF
Trigger: AAAGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGACATTCCTACTGTCATGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 90 bp GACTCTGTCCGTATGCCTTTCCAAACCATAGCTGCCTTAACTGACTaGCTTGGTGTTTATTCTAGCGTAACATTGTCCAGTAGAACTATC +
Preference number: 1 (lower is better)
Translates to: DSVRMPFQTIAALTD*LGVYSSVTLSSRTI
Trigger: GATAGTTCTACTGGACAATGTTACGCTAGAATAAACACCAAGGCAGTCAGTTAAGGCAGCTATGGTTTGGAAAGGCATACGGACAGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 90 bp CCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCTTTATTGAGCAAATATATGGCCAAG +
Preference number: 1 (lower is better)
Translates to: PHASHMHYALNPGQL*PCFLQSLLSKYMAK
Trigger: CTTGGCCATATATTTGCTCAATAAAGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 90 bp TCAATAGAAATTGTGCTAAACAGCATAAAACCTGTGGTCAGAGTCTaGCCCAATACCACAGACATTTCTGAGCCCAAAGGGACTCAGTTT +
Preference number: 1 (lower is better)
Translates to: SIEIVLNSIKPVVRV*PNTTDISEPKGTQF
Trigger: AAACTGAGTCCCTTTGGGCTCAGAAATGTCTGTGGTATTGGGTCAGACTCTGACCACAGGTTTTATGCTGTTTAGCACAATTTCTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR TCA 90 bp GGATTTCCTAAGTATCTCTCCTTCATCCTACCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTAAACCTTTGCCTACACTTGCTCTTA +
Preference number: 1 (lower is better)
Translates to: GFPKYLSFILPAIIL*LYVHFLNLCLHLLL
Trigger: TAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATGGACATAAAGTCAAAGAATGATGGCAGGTAGGATGAAGGAGAGATACTTAGGAAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 90 bp CTATTTCTGCTTCCAAACTCTGATAACGGTTGTGAAATTACTGACTaGCTTCCTTTGGCAGTGGGGCCAAGAAACAATATATATGAATGT +
Preference number: 1 (lower is better)
Translates to: LFLLPNSDNGCEITD*LPLAVGPRNNIYEC
Trigger: ACATTCATATATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAGAGTTTGGAAGCAGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGGAGGCCGGGGCCGCTTaGGCTCCTTCCAGCGGAGGT +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEEAGAA*APSSGG
Trigger: ACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTC...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 2 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSRRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGAGTACACTGTCCCGGTaGCCCACACCAAGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGSTLSR*PTPRWL
Trigger: GAGCCACCTTGGTGTGGGTCACCGGGACAGTGTACT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 2 (lower is better)
Translates to: LGGEEWSGRETASLLTNSRRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: RKEAAADSGCGASTLWMCEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGGGGATTGCTTGGGTCTaGACAGCAGTCCCTCACACT +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGGIAWV*TAVPHT
Trigger: AGTGTGAGGGACTGCTGTGCAGACCCAAGCAATCCC...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCGAGCCCTGGGATGGGTaGCAGCTTAGCTCAGACAGA +
Preference number: 2 (lower is better)
Translates to: RKEAAADSGCGASTLWMCEPWDG*QLSSDR
Trigger: TCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTC...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AAAGGGACTCCAGAAAGGGCAATCCCGATGCCAATGAGGGAATTAATGGTGTCAGAGGCCGGGGCCGCTTaGGCTCCTTCCAGCGGAGGT +
Preference number: 2 (lower is better)
Translates to: KGTPERAIPMPMRELMVSEAGAA*APSSGG
Trigger: ACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTC...TGACACCATTAATTCCCTCATTGGCATCGGGATTGCCCTTTCTGGAGTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTCGGGGAAGGGGAGGCTaGCAGGAGAGGAGTACACTG +
Preference number: 2 (lower is better)
Translates to: MSMRFCHMPLRALSPELTRGRGG*QERSTL
Trigger: CAGTGTACTCCTCTCCTGCCAGCCTCCCCTTCCCCG...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGACGGGGAAGGGGAGGCTaGCAGGAGAGGAGTACACTG +
Preference number: 2 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRRGRGG*QERSTL
Trigger: CAGTGTACTCCTCTCCTGCCAGCCTCCCCTTCCCCG...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACAGTACACTGTCCCGGTaGCCCACACCAAGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYSTLSR*PTPRWL
Trigger: GAGCCACCTTGGTGTGGGTCACCGGGACAGTGTACT...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAAGTACACTGTCCCGGTaGCCCACACCAAGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPSTLSR*PTPRWL
Trigger: GAGCCACCTTGGTGTGGGTCACCGGGACAGTGTACT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCGTACCAAGCTCTTCCTaGGACTGCAGCCACCACACC +
Preference number: 2 (lower is better)
Translates to: LGGEEWSGRETASLLTNSVPSSS*DCSHHT
Trigger: GGTGTGGTGGCTGCAGTCTCAGGAAGAGCTTGGTAC...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: VGILWLRSQREDPGRSLYEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTACAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: AWVCTAVPHTALTERNRLQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGACCTAGCACCAGGTTaGGATTGCTTGGGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSDLAPG*DCLGLH
Trigger: GTGCAGACCCAAGCAATCCCAACCTGGTGCTAGGTC...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGCGGGGAAGGGGAGGCTaGCAGGAGAGGAGTACACTG +
Preference number: 2 (lower is better)
Translates to: AVMICSVSALCSSRHGWLRGRGG*QERSTL
Trigger: CAGTGTACTCCTCTCCTGCCAGCCTCCCCTTCCCCG...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCCGGGGAAGGGGAGGCTaGCAGGAGAGGAGTACACTG +
Preference number: 2 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTRGRGG*QERSTL
Trigger: CAGTGTACTCCTCTCCTGCCAGCCTCCCCTTCCCCG...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGCTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQLSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 2 (lower is better)
Translates to: VGILWLRSQREDPGRSLYSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGATTGCATCCTGTAGATaGAGAGACACGCATGCTTCG +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGIASCR*RDTHAS
Trigger: CGAAGCATGCGTGTCTCTTCATCTACAGGATGCAAT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCAAGCCATTGACAGCTaGGAGAATTCAGGTGATCCA +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGQAIDS*ENSGDP
Trigger: TGGATCACCTGAATTCTCTCAGCTGTCAATGGCTTG...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTGTACCAAGCTCTTCCTaGGACTGCAGCCACCACACC +
Preference number: 2 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIVPSSS*DCSHHT
Trigger: GGTGTGGTGGCTGCAGTCTCAGGAAGAGCTTGGTAC...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPTCAAC*RAGLRL
Trigger: CAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAGTGGAGAGCCCAGCCTaGGCACCAGAATTAGTTGCT +
Preference number: 2 (lower is better)
Translates to: VMSMRFCHMPLRALSPELVESPA*APELVA
Trigger: AGCAACTAATTCTGGTGCTCAGGCTGGGCTCTCCAC...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCTGTCATGGGGGAAGGTaGGTTACACAGGGAGGTACC +
Preference number: 2 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTCHGGR*VTQGGT
Trigger: GGTACCTCCCTGTGTAACTCACCTTCCCCCATGACA...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGTGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 2 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGGAGCATAAAACACGCTCAGCTTaGGAGGCCGGGGCCGCTTGG +
Preference number: 2 (lower is better)
Translates to: RELMVSVKRGTITRNTEHKTRSA*EAGAAW
Trigger: CCAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTT...ATGCTCCGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCCTGGCACAGCACGTGTGCCCCACTTaGCATAGGCACAGTTCACAA +
Preference number: 2 (lower is better)
Translates to: GMVQLNMPNVWSANVLAQHVCPT*HRHSSQ
Trigger: TTGTGAACTGTGCCTATGTCAAGTGGGGCACACGTG...CTGTGCCAGGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563080.1
3UTR-3UTR TCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTCCCTCAAAGGCGTCCTaGAAGTGCTCAGAGTGTCCC +
Preference number: 2 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIPSKAS*KCSECP
Trigger: GGGACACTCTGAGCACTTTCAGGACGCCTTTGAGGG...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648130.1
3UTR-3UTR GCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGAGCAGTCCCTCACACTaGCCTTACAGAGAGGAACAG +
Preference number: 2 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWSSPSH*PYREEQ
Trigger: CTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCT...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGAGTTGCTTCCACTTGTaGAGCCTGCTGAAGAGCCGG +
Preference number: 2 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRSCFHL*SLLKSR
Trigger: CCGGCTCTTCAGCAGGCTGCACAAGTGGAAGCAACT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCTAGAAGCCACTGGTaGGGGGCAGCAAATTCCTGG +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPPRSHW*GAANSW
Trigger: CCAGGAATTTGCTGCCCCCCACCAGTGGCTTCTAGG...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTCCTAGAAGCCACTGGTaGGGGGCAGCAAATTCCTGG +
Preference number: 2 (lower is better)
Translates to: MSMRFCHMPLRALSPELTPRSHW*GAANSW
Trigger: CCAGGAATTTGCTGCCCCCCACCAGTGGCTTCTAGG...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGCCAAAGAGAGGATCCTaGGAGAAGTCTGTATCCAGC +
Preference number: 2 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQPKRGS*EKSVSS
Trigger: GCTGGATACAGACTTCTCCCAGGATCCTCTCTTTGG...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: ACECLLLTVMGEGELHREAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp CAGACTGATGGTCTTGTGATGTCCATGAGGTTCTGCCACATGCCCTaGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGT +
Preference number: 2 (lower is better)
Translates to: QTDGLVMSMRFCHMP*RALSPELTALLTSC
Trigger: ACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAGACCATCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGCTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPELSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 2 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGGATGACTTGGGCCCATaGGATGTTCTCCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQDDLGP*DVLQAI
Trigger: AATGGCTTGGAGAACATCTCATGGGCCCAAGTCATC...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCACCTCCCAGTCTTCACTaGTCTCCACAGGGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSPPSLH*SPQGEN
Trigger: GTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAGG...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTGAGCCCCGTGGTCCCAGCAAAGCTTACATTGAACAGTAAAGCAGGGATAGGTTGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 2 (lower is better)
Translates to: LSPVVPAKLTLNSKAGIGWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...ACCTATCCCTGCTTTACTGTTCAATGTAAGCTTTGCTGGGACCACGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567346.5
3UTR-3UTR GCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGLLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGAGTTGTACAATCCAATaGAGCCGTCCTGCTCATACA +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGSCTIQ*SRPAHT
Trigger: TGTATGAGCAGGACGGCTGCATTGGATTGTACAACT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPETMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCGCCATACCACCAGGCTaGCTGCCTCTAGGAAAACCC +
Preference number: 2 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTAIPPG*LPLGKP
Trigger: GGGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGC...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAGCAGTAAGCTTCTaGTGTGCCATACCACCAGGC +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPELAVSF*CAIPPG
Trigger: GCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAA...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: ESCYQDFAGWPAFQASESQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...GCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAGACCTAGCACCAGGTTaGGATTGCTTGGGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPDLAPG*DCLGLH
Trigger: GTGCAGACCCAAGCAATCCCAACCTGGTGCTAGGTC...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 2 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTATTCCGAATAAACAATaGCCTCCGGGACTCTGGCAG +
Preference number: 2 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSIPNKQ*PPGLWQ
Trigger: CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAAT...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GGTGATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGCAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCA +
Preference number: 2 (lower is better)
Translates to: GDSSQDIPNKQWPPGLWQQKQSC*VPLVIA
Trigger: TGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTG...CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATTGCTCAGAGTGTCCCTaGCACAGTTTAACAAGGCCC +
Preference number: 2 (lower is better)
Translates to: VGILWLRSQREDPGRSLYCSECP*HSLTRP
Trigger: GGGCCTTGTTAAACTGTGCCAGGGACACTCTGAGCA...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648130.1
3UTR-3UTR TCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 2 (lower is better)
Translates to: IACECLLLTVMGEGELHRSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACGGTTGGCCCAGATCCTaGGTCTCCTATAGCTTACCA +
Preference number: 2 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYGWPRS*VSYSLP
Trigger: TGGTAAGCTATAGGAGACTCAGGATCTGGGCCAACC...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGATGACTTGGGCCCATaGGATGTTCTCCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTDDLGP*DVLQAI
Trigger: AATGGCTTGGAGAACATCTCATGGGCCCAAGTCATC...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGAGGTTTTCAGAAAAGTaGAATGACCTAGCACCAGGT +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGRFSEK*NDLAPG
Trigger: ACCTGGTGCTAGGTCATTTCACTTTTCTGAAAACCT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTCCTCCCAGTCTTCACTaGTCTCCACAGGGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: MSMRFCHMPLRALSPELTPPSLH*SPQGEN
Trigger: GTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAGG...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAG +
Preference number: 2 (lower is better)
Translates to: RKEAAADSGCGASTLWMCRLPHC*PIPKPK
Trigger: CTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCT...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPENPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTTACCCTCATAGCCTGTaGGTGTCTCTTACTCACTGT +
Preference number: 2 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSYPHSL*VSLTHC
Trigger: ACAGTGAGTAAGAGACACTCACAGGCTATGAGGGTA...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGGGGCAGAAAGTAGTCTaGGCAGTGGGAGATTTTAGT +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEGQKVV*AVGDFS
Trigger: ACTAAAATCTCCCACTGCTCAGACTACTTTCTGCCC...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGACCATCCCACCACAGTaGAAACTTATGTTAGGGGAG +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPETIPPQ*KLMLGE
Trigger: CTCCCCTAACATAAGTTTTCACTGTGGTGGGATGGT...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAAGCAGGTAAACACCCATaGAGTAGAAAGGGACTCCAG +
Preference number: 2 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKAGKHP*SRKGLQ
Trigger: CTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGC...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTTTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACTTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTTTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: MSMRFCHMPLRALSPELTFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAGCAGTCCCTCACACTaGCCTTACAGAGAGGAACAG +
Preference number: 2 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTSSPSH*PYREEQ
Trigger: CTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCT...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCGGGATTGCTTGGGTCTaGACAGCAGTCCCTCACACT +
Preference number: 2 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLGIAWV*TAVPHT
Trigger: AGTGTGAGGGACTGCTGTGCAGACCCAAGCAATCCC...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTACGTCGGGCAGGAATTTaGCGTTACAAATCCCAAACC +
Preference number: 2 (lower is better)
Translates to: VMSMRFCHMPLRALSPELRRAGI*RYKSQT
Trigger: GGTTTGGGATTTGTAACGGCAAATTCCTGCCCGACG...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTC +
Preference number: 2 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSRQVSL*IRHPVV
Trigger: GACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCT...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTAACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: HALEGSESRVNCPADILLTMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAAGTACCCTCTGGATGTaGAGAAGGAGTTCGGCTATG +
Preference number: 2 (lower is better)
Translates to: VMSMRFCHMPLRALSPELSTLWM*RRSSAM
Trigger: CATAGCCGAACTCCTTCTGCACATCCAGAGGGTACT...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATTTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: VGILWLRSQREDPGRSLYLSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCATTCCTGGGATTAGCTaGTTATCTGGTGGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: RKEAAADSGCGASTLWMCIPGIS*LSGGES
Trigger: GCTTTCTCCACCAGATAACCAGCTAATCCCAGGAAT...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGATTCCTGGGATTAGCTaGTTATCTGGTGGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQIPGIS*LSGGES
Trigger: GCTTTCTCCACCAGATAACCAGCTAATCCCAGGAAT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TCCCTCTTATTTAACAACTTAGCACAAATCAGAAGGAGCAATGCACAGATCCACAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 2 (lower is better)
Translates to: SLLFNNLAQIRRSNAQIHRRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...GTGGATCTGTGCATTGCTCCTTCTGATTTGTGCTAAGTTGTTAAATAAGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567346.5
3UTR-3UTR CCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 2 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCACAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCA +
Preference number: 2 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSQKQSC*VPLVIA
Trigger: TGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTG...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp TTTAATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTaGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTGAC +
Preference number: 2 (lower is better)
Translates to: FNSGELGPQSLVIRI*LVGLPSRPQKATSD
Trigger: GTCAGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp GGTCAAAAGGCTCCTTTAATTCAGGAGAGTTGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: GQKAPLIQESWAHRV*LSGFCWLACLPGLR
Trigger: TCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAAGGAGCCTTTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp GCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTaGATGACTTGGGCCCATGAGATGTTCTCCAAGCCATTGACAGCT +
Preference number: 2 (lower is better)
Translates to: AQQSLTLPLQRGTGY*MTWAHEMFSKPLTA
Trigger: AGCTGTCAATGGCTTGGAGAACATCTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACCTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: VASSCCSGHHRSKETTQNLSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGGTTGGCCCAGATCCTaGGTCTCCTATAGCTTACCA +
Preference number: 2 (lower is better)
Translates to: IACECLLLTVMGEGELHRGWPRS*VSYSLP
Trigger: TGGTAAGCTATAGGAGACTCAGGATCTGGGCCAACC...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGTACCACAGACATTTCTaGGCCCAAAGGGACTCAGTT +
Preference number: 2 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRYHRHF*AQRDSV
Trigger: AACTGAGTCCCTTTGGGCTCAGAAATGTCTGTGGTA...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: RKEAAADSGCGASTLWMCKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTAGGGCAGAAAGTAGTCTaGGCAGTGGGAGATTTTAGT +
Preference number: 2 (lower is better)
Translates to: HALEGSESRVNCPADILLGQKVV*AVGDFS
Trigger: ACTAAAATCTCCCACTGCTCAGACTACTTTCTGCCC...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACAAAACACGCTCAGCTTaGGAGGCCGGGGCCGCTTGG +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHKTRSA*EAGAAW
Trigger: CCAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTT...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGTTCCCTCTTCCCCACTaGACTTTACCAAGTAAATAT +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGFPLPH*TLPSKY
Trigger: ATATTTACTTGGTAAAGTGCAGTGGGGAAGAGGGAA...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCTTCACATATGCATTATaGTCTGAACCCAGGGCAACT +
Preference number: 2 (lower is better)
Translates to: RKEAAADSGCGASTLWMCFTYAL*SEPRAT
Trigger: AGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAA...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTCGTCGGGCAGGAATTTaGCGTTACAAATCCCAAACC +
Preference number: 2 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIRRAGI*RYKSQT
Trigger: GGTTTGGGATTTGTAACGGCAAATTCCTGCCCGACG...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGCAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PMRELMVSVKRGTITRNTQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGTTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: QLNMPNVWSANVTATASLLSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...CAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGGTAAACACCCATTTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: QDIPNKQWPPGLWQVNTHLSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...ATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 2 (lower is better)
Translates to: VGILWLRSQREDPGRSLYSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 2 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGATATGCAGAACACGATaGGGAAAAACACGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEICRTR*GKTRSA
Trigger: AGCTGAGCGTGTTTTTCCCCATCGTGTTCTGCATAT...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp TCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTaGTACAATCCAATGCAGCCGTCCTGCTCATACAGTAAGATCCAT +
Preference number: 2 (lower is better)
Translates to: SSRPRMTVSGGITKQ*YNPMQPSCSYSKIH
Trigger: ATGGATCTTACTGTATGAGCAGGACGGCTGCATTGGATTGTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCAAGTGCTTGTAACGTaGTCTATGATCTATCTGTAT +
Preference number: 2 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGQVLVT*SMIYLY
Trigger: ATACAGATAGATCATAGATCACGTTACAAGCACTTG...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGATGTTCTCCAAGCCATTaGCAGCTGAGAGAATTCAGG +
Preference number: 2 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRCSPSH*QLREFR
Trigger: CCTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACA...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTAGAAGAGGATGCAGCCTaGTGTGAGGTTTTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: HALEGSESRVNCPADILLEEDAA*CEVFRK
Trigger: TTTTCTGAAAACCTCACATCAGGCTGCATCCTCTTC...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFTCAAC*RAGLRL
Trigger: CAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPNPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAGTCACCATCCAAAAATaGAAGGAGGATGACATGGCT +
Preference number: 2 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSVTIQK*KEDDMA
Trigger: AGCCATGTCATCCTCCTTTCATTTTTGGATGGTGAC...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGTTCAACCTGCCGAAGTaGTTAAATTCTGTGTACACA +
Preference number: 2 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQFNLPK*LNSVYT
Trigger: TGTGTACACAGAATTTAATCACTTCGGCAGGTTGAA...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCCATAGCTGCCTTAACTaGCTGCCTTGGTGTTTATTC +
Preference number: 2 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTHSCLN*LPWCLF
Trigger: GAATAAACACCAAGGCAGTCAGTTAAGGCAGCTATG...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAGGGCAGAAAGTAGTCTaGGCAGTGGGAGATTTTAGT +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPGQKVV*AVGDFS
Trigger: ACTAAAATCTCCCACTGCTCAGACTACTTTCTGCCC...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACTCAGAAAGCCACCTCTaGCCTCTAGTCAGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: VASSCCSGHHRSKETTQNSESHL*PLVSFP
Trigger: AGGAAAACTGACTAGAGGTCAGAGGTGGCTTTCTGA...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYLLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACAGCACCAGAATTAGTTaGTTCCACTTGTGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: VASSCCSGHHRSKETTQNSTRIS*FHLCSL
Trigger: CAGGCTGCACAAGTGGAAGCAACTAATTCTGGTGCT...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAAGCACCAGAATTAGTTaGTTCCACTTGTGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRSTRIS*FHLCSL
Trigger: CAGGCTGCACAAGTGGAAGCAACTAATTCTGGTGCT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATAGTTGTACAATCCAATaGAGCCGTCCTGCTCATACA +
Preference number: 2 (lower is better)
Translates to: VGILWLRSQREDPGRSLYSCTIQ*SRPAHT
Trigger: TGTATGAGCAGGACGGCTGCATTGGATTGTACAACT...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCTGTGCTGTTACAATGTaGTCCCTGCTATTTATACTC +
Preference number: 2 (lower is better)
Translates to: RKEAAADSGCGASTLWMCCAVTM*SLLFIL
Trigger: GAGTATAAATAGCAGGGAGCACATTGTAACAGCACA...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp ATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCGATGAGGTAGATGAGTaGCATGGTGCAATTGAACAG +
Preference number: 2 (lower is better)
Translates to: MGMVQLNMPNVWSANVTADEVDE*HGAIEQ
Trigger: CTGTTCAATTGCACCATGGCACTCATCTACCTCATC...GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGGGTTATTTGATGACTTaGGCCCATGAGATGTTCTCC +
Preference number: 2 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRGYLMT*AHEMFS
Trigger: GGAGAACATCTCATGGGCCCAAGTCATCAAATAACC...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTAGGTTATTTGATGACTTaGGCCCATGAGATGTTCTCC +
Preference number: 2 (lower is better)
Translates to: HALEGSESRVNCPADILLGYLMT*AHEMFS
Trigger: GGAGAACATCTCATGGGCCCAAGTCATCAAATAACC...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGTTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: ACECLLLTVMGEGELHRELSVTG*RRMVRK
Trigger: CTTCCTGACCATTCTTCTCCACCCAGTCACAGATAA...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCCTGACTGACTTCCTTTaGCAGTGGGGCCAAGAAACA +
Preference number: 2 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTLTDFL*QWGQET
Trigger: TGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAG...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAGTAAAACGCTCAATGTaGATCATGGACAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSVKRSM*IMDRRS
Trigger: GGACCTTCTGTCCATGATCCACATTGAGCGTTTTAC...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGATTCCGAATAAACAATaGCCTCCGGGACTCTGGCAG +
Preference number: 2 (lower is better)
Translates to: IACECLLLTVMGEGELHRIPNKQ*PPGLWQ
Trigger: CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAAT...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp AGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGTCGGGCAGGAATTTGCCGTTACAAA +
Preference number: 2 (lower is better)
Translates to: SSDRSHVLSVQASQP*HKTPCRRAGICRYK
Trigger: TTTGTAACGGCAAATTCCTGCCCGACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp AATGCACAGATCCACCTGAGCCCCGTGGTCCCAGCAAAGCTTACATaGAACAGTAAAGCAGGGATAGGTGTAAAACGCTCAATGTGGATC +
Preference number: 2 (lower is better)
Translates to: NAQIHLSPVVPAKLT*NSKAGIGVKRSMWI
Trigger: GATCCACATTGAGCGTTTTACACCTATCCCTGCTTTACTGTTCAATGTAAGCTTTGCTGGGACCACGGGGCTCAGGTGGATCTGTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567346.5
3UTR-3UTR TCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 2 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGATTGCATCCTGTAGATaGAGAGACACGCATGCTTCG +
Preference number: 2 (lower is better)
Translates to: SAQQSLTLPLQRGTGYLMIASCR*RDTHAS
Trigger: CGAAGCATGCGTGTCTCTTCATCTACAGGATGCAAT...CATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCCAAGCCATTGACAGCTaGGAGAATTCAGGTGATCCA +
Preference number: 2 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLQAIDS*ENSGDP
Trigger: TGGATCACCTGAATTCTCTCAGCTGTCAATGGCTTG...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAG +
Preference number: 2 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIRLPHC*PIPKPK
Trigger: CTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCT...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACGTCACCATCCAAAAATaGAAGGAGGATGACATGGCT +
Preference number: 2 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYVTIQK*KEDDMA
Trigger: AGCCATGTCATCCTCCTTTCATTTTTGGATGGTGAC...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: ACECLLLTVMGEGELHREKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGAACTTAGCTTTCCACTaGGTAATGTTTACTCTTCAC +
Preference number: 2 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQNLAFH*VMFTLH
Trigger: GTGAAGAGTAAACATTACTCAGTGGAAAGCTAAGTT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACGCAGGTAAACACCCATaGAGTAGAAAGGGACTCCAG +
Preference number: 2 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDAGKHP*SRKGLQ
Trigger: CTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGC...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618043.4
3UTR-3UTR GCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATATGAAGAGACACGCATaGTTCGTTAGAACTGGTGTT +
Preference number: 2 (lower is better)
Translates to: VGILWLRSQREDPGRSLYMKRHA*FVRTGV
Trigger: AACACCAGTTCTAACGAAGCATGCGTGTCTCTTCAT...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGAGCCCTGGGATGGGTaGCAGCTTAGCTCAGACAGA +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHEPWDG*QLSSDR
Trigger: TCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTC...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTTGTGCTGTTACAATGTaGTCCCTGCTATTTATACTC +
Preference number: 2 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSCAVTM*SLLFIL
Trigger: GAGTATAAATAGCAGGGAGCACATTGTAACAGCACA...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCTCCAGTAGAACTATCTaGAGTGATGATATGTTCTGT +
Preference number: 2 (lower is better)
Translates to: RKEAAADSGCGASTLWMCSSRTI*SDDMFC
Trigger: ACAGAACATATCATCACTGCAGATAGTTCTACTGGA...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: LGGEEWSGRETASLLTNSLIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACGTCAGGTGTTGTACCTaGTCAGAGAAAAACTTCCCA +
Preference number: 2 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYVRCCT*SEKNFP
Trigger: TGGGAAGTTTTTCTCTGACCAGGTACAACACCTGAC...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAATTCCTGGGATTAGCTaGTTATCTGGTGGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRIPGIS*LSGGES
Trigger: GCTTTCTCCACCAGATAACCAGCTAATCCCAGGAAT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACCCTAGAAGCCACTGGTaGGGGGCAGCAAATTCCTGG +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHPRSHW*GAANSW
Trigger: CCAGGAATTTGCTGCCCCCCACCAGTGGCTTCTAGG...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTATTGCTCTTATCTACATaGAGTTGTTCAACCTGCCGA +
Preference number: 2 (lower is better)
Translates to: VMSMRFCHMPLRALSPELLLLST*SCSTCR
Trigger: TCGGCAGGTTGAACAACTCCATGTAGATAAGAGCAA...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGGACTTCCTTTGGCAGTaGGGCCAAGAAACAATATAT +
Preference number: 2 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRDFLWQ*GQETIY
Trigger: ATATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTC...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAATATGCAGAACACGATaGGGAAAAACACGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPICRTR*GKTRSA
Trigger: AGCTGAGCGTGTTTTTCCCCATCGTGTTCTGCATAT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGTCAGGTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATCTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: SQVLYLVREKLPIKQPLYLSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...ATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACACCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGTACCACAGACATTTCTaGGCCCAAAGGGACTCAGTT +
Preference number: 2 (lower is better)
Translates to: PMRELMVSVKRGTITRNTYHRHF*AQRDSV
Trigger: AACTGAGTCCCTTTGGGCTCAGAAATGTCTGTGGTA...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618043.4
3UTR-3UTR TCA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACCAAGCCATTGACAGCTaGGAGAATTCAGGTGATCCA +
Preference number: 2 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDQAIDS*ENSGDP
Trigger: TGGATCACCTGAATTCTCTCAGCTGTCAATGGCTTG...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGTTCAGAAAAGTGAAATaGCCTAGCACCAGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: IACECLLLTVMGEGELHRFRKVK*PSTRLG
Trigger: TCCCAACCTGGTGCTAGGTCATTTCACTTTTCTGAA...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCGGATGCAGCCTGATGTaGGGTTTTCAGAAAAGTGAA +
Preference number: 2 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLGCSLM*GFQKSE
Trigger: TTCACTTTTCTGAAAACCTCACATCAGGCTGCATCC...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GTCACCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACCGAAGAGGATGCAGCCTaGTGTGAGGTTTTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: VTPCFTYALCSEPRATMTEEDAA*CEVFRK
Trigger: TTTTCTGAAAACCTCACATCAGGCTGCATCCTCTTC...GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGACCTCCCAGTCTTCACTaGTCTCCACAGGGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGPPSLH*SPQGEN
Trigger: GTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAGG...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTCCTTCAATCTTTATTaGGCAAATATATGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: LVMSMRFCHMPLRALSPESFNLY*ANIWPR
Trigger: CCTTGGCCATATATTTGCTCAATAAAGATTGAAGGA...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 2 (lower is better)
Translates to: AVMICSVSALCSSRHGWLICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACTGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: SAQQSLTLPLQRGTGYLMLLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...CATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGTTCCCTCTTCCCCACTaGACTTTACCAAGTAAATAT +
Preference number: 2 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRFPLPH*TLPSKY
Trigger: ATATTTACTTGGTAAAGTGCAGTGGGGAAGAGGGAA...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTC +
Preference number: 2 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEVRKGD*LTVDQF
Trigger: GAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGAC...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTC +
Preference number: 2 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHVRKGD*LTVDQF
Trigger: GAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGAC...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGATTCACATATGCATTATaGTCTGAACCCAGGGCAACT +
Preference number: 2 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRFTYAL*SEPRAT
Trigger: AGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAA...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGACCTTTGCCTACACTTaGTCTTATCTACATGGAGTT +
Preference number: 2 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRTFAYT*SYLHGV
Trigger: AACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: ESCYQDFAGWPAFQASESLIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...GCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: PVELSAVMICSVSALCSSAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGATATGCAGAACACGATaGGGAAAAACACGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: AVMICSVSALCSSRHGWLICRTR*GKTRSA
Trigger: AGCTGAGCGTGTTTTTCCCCATCGTGTTCTGCATAT...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGACTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGLSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AGTCAGGTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATTGTTCTCCAAGCCATTaGCAGCTGAGAGAATTCAGG +
Preference number: 2 (lower is better)
Translates to: SQVLYLVREKLPIKQPLYCSPSH*QLREFR
Trigger: CCTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACA...ATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACACCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAGTACACTGTCCCGGTaGCCCACACCAAGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSESTLSR*PTPRWL
Trigger: GAGCCACCTTGGTGTGGGTCACCGGGACAGTGTACT...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 2 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACCAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACCACGTGTGCCCCACTTaGCATAGGCACAGTTCACAA +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHHVCPT*HRHSSQ
Trigger: TTGTGAACTGTGCCTATGTCAAGTGGGGCACACGTG...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648130.1
3UTR-3UTR GCA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: PMRELMVSVKRGTITRNTLLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATAATATCTGTAAGAGCTaGATCTACCTATCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: VGILWLRSQREDPGRSLYNICKS*IYLSGV
Trigger: TACTCCTGATAGGTAGATGCAGCTCTTACAGATATT...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATAGCACCAGAATTAGTTaGTTCCACTTGTGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHSTRIS*FHLCSL
Trigger: CAGGCTGCACAAGTGGAAGCAACTAATTCTGGTGCT...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAACCTTTGCCTACACTTaGTCTTATCTACATGGAGTT +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPTFAYT*SYLHGV
Trigger: AACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGGAAACACGGAGCATATaGAGAACACGATGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: TAVPHTALTERNRLFDDLETRSI*RTRWGK
Trigger: TTTTCCCCATCGTGTTCTGCATATGCTCCGTGTTTC...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618043.4
3UTR-3UTR CCA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTCTGACTGACTTCCTTTaGCAGTGGGGCCAAGAAACA +
Preference number: 2 (lower is better)
Translates to: LHYNREQKQTFLRREGAPLTDFL*QWGQET
Trigger: TGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAG...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTTGTAGCAATACAGACTaGATAGTAATGGCCATTAGG +
Preference number: 2 (lower is better)
Translates to: MSMRFCHMPLRALSPELTCSNTD*IVMAIR
Trigger: CCTAATGGCCATTACTATCCAGTCTGTATTGCTACA...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAGGATGCAGCCTGATGTaGGGTTTTCAGAAAAGTGAA +
Preference number: 2 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEGCSLM*GFQKSE
Trigger: TTCACTTTTCTGAAAACCTCACATCAGGCTGCATCC...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCATCCTTCAATCTTTATTaGGCAAATATATGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: REGEVPISLAVSFCCAIPSFNLY*ANIWPR
Trigger: CCTTGGCCATATATTTGCTCAATAAAGATTGAAGGA...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 2 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFNPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACCCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTA +
Preference number: 2 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYPAIIL*LYVHFL
Trigger: TAGAAAATGGACATAAAGTCAAAGAATGATGGCAGG...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTGACCTGGATTCAGACTaGTGGTCTTGTGATGTCCAT +
Preference number: 2 (lower is better)
Translates to: LHYNREQKQTFLRREGAPDLDSD*WSCDVH
Trigger: ATGGACATCACAAGACCATCAGTCTGAATCCAGGTC...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAACTGCTAAGGACATCTaGAATGTTCAGCACTGTGTA +
Preference number: 2 (lower is better)
Translates to: NVWSANVTATASLLRTSETAKDI*NVQHCV
Trigger: TACACAGTGCTGAACATTTCAGATGTCCTTAGCAGT...TTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379152.7
ENST00000566579.5
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCCTCCTTCATCCTACCTaGCATCATTCTTTGACTTTA +
Preference number: 2 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTLLHPT*HHSLTL
Trigger: TAAAGTCAAAGAATGATGGCAGGTAGGATGAAGGAG...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNLIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAGTCAGGTGTTGTACCTaGTCAGAGAAAAACTTCCCA +
Preference number: 2 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEVRCCT*SEKNFP
Trigger: TGGGAAGTTTTTCTCTGACCAGGTACAACACCTGAC...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGCAGGTTGGGATTGCTTaGGTCTGCACAGCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLQVGIA*VCTAVP
Trigger: AGGGACTGCTGTGCAGACCCAAGCAATCCCAACCTG...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGACAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 2 (lower is better)
Translates to: LHYNREQKQTFLRREGAPSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AGGCCTTTCTCAGGGTCCCTCTTATTTAACAACTTAGCACAAATCAGAAGGAGCAACATGCCAAACGTCTaGTCAGCAAATGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: RPFSGSLLFNNLAQIRRSNMPNV*SANVTA
Trigger: GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTT...GCTCCTTCTGATTTGTGCTAAGTTGTTAAATAAGAGGGACCCTGAGAAAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567346.5
3UTR-3UTR TCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCCCTCCCAGTCTTCACTaGTCTCCACAGGGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTPPSLH*SPQGEN
Trigger: GTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAGG...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: VCLILDILLSVCRHRNKGTCAAC*RAGLRL
Trigger: CAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGT...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAG +
Preference number: 2 (lower is better)
Translates to: LHYNREQKQTFLRREGAPRLPHC*PIPKPK
Trigger: CTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCT...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATAAAATGAAAGGAGGATaGCATGGCTCACTAAGCAAG +
Preference number: 2 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHKMKGG*HGSLSK
Trigger: CTTGCTTAGTGAGCCATGTCATCCTCCTTTCATTTT...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCAACTTAGCTTTCCACTaGGTAATGTTTACTCTTCAC +
Preference number: 2 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTNLAFH*VMFTLH
Trigger: GTGAAGAGTAAACATTACTCAGTGGAAAGCTAAGTT...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGCAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACTCAGAAAGCCACCTCTaGCCTCTAGTCAGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHSESHL*PLVSFP
Trigger: AGGAAAACTGACTAGAGGTCAGAGGTGGCTTTCTGA...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGCGACCTTGGCGTAAGTaGACGTGTCCTGCACACGTG +
Preference number: 2 (lower is better)
Translates to: CLILDILLSVCRHRNKGLRPWRK*TCPAHV
Trigger: CACGTGTGCAGGACACGTTCACTTACGCCAAGGTCG...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648130.1
3UTR-3UTR GCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGGCACCAGGTTGGGATTaGTTGGGTCTGCACAGCAGT +
Preference number: 2 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRAPGWD*LGLHSS
Trigger: ACTGCTGTGCAGACCCAAGCAATCCCAACCTGGTGC...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAGTTGCTTCCACTTGTaGAGCCTGCTGAAGAGCCGG +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSESCFHL*SLLKSR
Trigger: CCGGCTCTTCAGCAGGCTGCACAAGTGGAAGCAACT...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAAGGAATGTCACCCCATaGTTCACATATGCATTATGC +
Preference number: 2 (lower is better)
Translates to: LITVVKLLTDFLWQWGQERNVTP*FTYALC
Trigger: GCATAATGCATATGTGAAGCATGGGGTGACATTCCT...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTGAAACACGGAGCATATaGAGAACACGATGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFETRSI*RTRWGK
Trigger: TTTTCCCCATCGTGTTCTGCATATGCTCCGTGTTTC...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGCAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGGACCTAGCACCAGGTTaGGATTGCTTGGGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEDLAPG*DCLGLH
Trigger: GTGCAGACCCAAGCAATCCCAACCTGGTGCTAGGTC...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGATTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGLSVTG*RRMVRK
Trigger: CTTCCTGACCATTCTTCTCCACCCAGTCACAGATAA...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 2 (lower is better)
Translates to: PVELSAVMICSVSALCSSSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAACATGCCAAACGTCTaGTCAGCAAATGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: PVELSAVMICSVSALCSSNMPNV*SANVTA
Trigger: GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTT...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCCCTGTGGTCAGAGTCTaGCCCAATACCACAGACATT +
Preference number: 2 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTPVVRV*PNTTDI
Trigger: AATGTCTGTGGTATTGGGTCAGACTCTGACCACAGG...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACTTCAGAAAAGTGAAATaGCCTAGCACCAGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHFRKVK*PSTRLG
Trigger: TCCCAACCTGGTGCTAGGTCATTTCACTTTTCTGAA...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGATGCAGCCTGATGTaGGGTTTTCAGAAAAGTGAA +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHGCSLM*GFQKSE
Trigger: TTCACTTTTCTGAAAACCTCACATCAGGCTGCATCC...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAGTGGAGAGCCCAGCCTaGGCACCAGAATTAGTTGCT +
Preference number: 2 (lower is better)
Translates to: VCLILDILLSVCRHRNKGVESPA*APELVA
Trigger: AGCAACTAATTCTGGTGCTCAGGCTGGGCTCTCCAC...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 2 (lower is better)
Translates to: PVELSAVMICSVSALCSSICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTAAAATGAAAGGAGGATaGCATGGCTCACTAAGCAAG +
Preference number: 2 (lower is better)
Translates to: LHYNREQKQTFLRREGAPKMKGG*HGSLSK
Trigger: CTTGCTTAGTGAGCCATGTCATCCTCCTTTCATTTT...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTC +
Preference number: 2 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTRQVSL*IRHPVV
Trigger: GACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCT...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGCATTTTCTAAACCTTTaGCTACACTTGCTCTTATCT +
Preference number: 2 (lower is better)
Translates to: AVMICSVSALCSSRHGWLHFLNL*LHLLLS
Trigger: AGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTLSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCCCAAAGAGAGGATCCTaGGAGAAGTCTGTATCCAGC +
Preference number: 2 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTPKRGS*EKSVSS
Trigger: GCTGGATACAGACTTCTCCCAGGATCCTCTCTTTGG...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp CCTACCTGCCATCATTCTTTGACTTTATGTCCATTTTCTAAACCTTaGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGCCG +
Preference number: 2 (lower is better)
Translates to: PTCHHSLTLCPFSKP*PTLALIYMELFNLP
Trigger: CGGCAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATGGACATAAAGTCAAAGAATGATGGCAGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCCTGTGGTCAGAGTCTaGCCCAATACCACAGACATT +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEPVVRV*PNTTDI
Trigger: AATGTCTGTGGTATTGGGTCAGACTCTGACCACAGG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTGTTCTCCAAGCCATTaGCAGCTGAGAGAATTCAGG +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLCSPSH*QLREFR
Trigger: CCTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGGTTTTCAGAAAAGTaGAATGACCTAGCACCAGGT +
Preference number: 2 (lower is better)
Translates to: PVELSAVMICSVSALCSSRFSEK*NDLAPG
Trigger: ACCTGGTGCTAGGTCATTTCACTTTTCTGAAAACCT...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAATCCTTCAATCTTTATTaGGCAAATATATGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: LITVVKLLTDFLWQWGQESFNLY*ANIWPR
Trigger: CCTTGGCCATATATTTGCTCAATAAAGATTGAAGGA...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAACCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTA +
Preference number: 2 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEPAIIL*LYVHFL
Trigger: TAGAAAATGGACATAAAGTCAAAGAATGATGGCAGG...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATATTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLIFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCGTCGGGCAGGAATTTaGCGTTACAAATCCCAAACC +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSERRAGI*RYKSQT
Trigger: GGTTTGGGATTTGTAACGGCAAATTCCTGCCCGACG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSETMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGATTCCGAATAAACAATaGCCTCCGGGACTCTGGCAG +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEIPNKQ*PPGLWQ
Trigger: CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAAT...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCA +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEQKQSC*VPLVIA
Trigger: TGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGACAAGTGCTTGTAACGTaGTCTATGATCTATCTGTAT +
Preference number: 2 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGQVLVT*SMIYLY
Trigger: ATACAGATAGATCATAGATCACGTTACAAGCACTTG...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTGATGACTTGGGCCCATaGGATGTTCTCCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: SSQHPPQKQTTINRINFIDDLGP*DVLQAI
Trigger: AATGGCTTGGAGAACATCTCATGGGCCCAAGTCATC...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGGAAGAGGATGCAGCCTaGTGTGAGGTTTTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLEEDAA*CEVFRK
Trigger: TTTTCTGAAAACCTCACATCAGGCTGCATCCTCTTC...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGGTCACCATCCAAAAATaGAAGGAGGATGACATGGCT +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLVTIQK*KEDDMA
Trigger: AGCCATGTCATCCTCCTTTCATTTTTGGATGGTGAC...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCCAATGCAGCCGTCCTaGTCATACAGTAAGATCCAT +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEPMQPS*SYSKIH
Trigger: ATGGATCTTACTGTATGAGCAGGACGGCTGCATTGG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTC +
Preference number: 2 (lower is better)
Translates to: VCLILDILLSVCRHRNKGVRKGD*LTVDQF
Trigger: GAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGAC...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTC +
Preference number: 2 (lower is better)
Translates to: VCLILDILLSVCRHRNKGRQVSL*IRHPVV
Trigger: GACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCT...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATAACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLITMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGGATGAGGTAGATGAGTaGCATGGTGCAATTGAACAG +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLDEVDE*HGAIEQ
Trigger: CTGTTCAATTGCACCATGGCACTCATCTACCTCATC...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp CAACCTGCCGAAGTGATTAAATTCTGTGTACACAGGCCGTATATATaGCAGCTAATTAAAACAACAAACATCCTAGGCATGCACAAAGGT +
Preference number: 2 (lower is better)
Translates to: QPAEVIKFCVHRPYI*QLIKTTNILGMHKG
Trigger: ACCTTTGTGCATGCCTAGGATGTTTGTTGTTTTAATTAGCTGCAATATATACGGCCTGTGTACACAGAATTTAATCACTTCGGCAGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAG +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSERLPHC*PIPKPK
Trigger: CTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCT...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTTCCTTCAATCTTTATTaGGCAAATATATGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: PVELSAVMICSVSALCSSSFNLY*ANIWPR
Trigger: CCTTGGCCATATATTTGCTCAATAAAGATTGAAGGA...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 2 (lower is better)
Translates to: CLILDILLSVCRHRNKGLNPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTTGGCTGCTGAGCACTTaGAATGTGATTAGCGCAACT +
Preference number: 2 (lower is better)
Translates to: SSQHPPQKQTTINRINFIWLLST*NVISAT
Trigger: AGTTGCGCTAATCACATTTCAAGTGCTCAGCAGCCA...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACAATATCTGTAAGAGCTaGATCTACCTATCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: ELSAVMICSVSALCSSRHNICKS*IYLSGV
Trigger: TACTCCTGATAGGTAGATGCAGCTCTTACAGATATT...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYLSVTG*RRMVRK
Trigger: CTTCCTGACCATTCTTCTCCACCCAGTCACAGATAA...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 2 (lower is better)
Translates to: VCLILDILLSVCRHRNKGICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: SSQHPPQKQTTINRINFILLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTTCCCTCTTCCCCACTaGACTTTACCAAGTAAATAT +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLFPLPH*TLPSKY
Trigger: ATATTTACTTGGTAAAGTGCAGTGGGGAAGAGGGAA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGAGGAATGTCACCCCATaGTTCACATATGCATTATGC +
Preference number: 2 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRRNVTP*FTYALC
Trigger: GCATAATGCATATGTGAAGCATGGGGTGACATTCCT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGGATGAGGTAGATGAGTaGCATGGTGCAATTGAACAG +
Preference number: 2 (lower is better)
Translates to: CLILDILLSVCRHRNKGLDEVDE*HGAIEQ
Trigger: CTGTTCAATTGCACCATGGCACTCATCTACCTCATC...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: LLSKDFALQSGTKTDLSELIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCCAGACAACAAAGAGCTaGCAGAAATTAATTCCACCA +
Preference number: 2 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTQTTKS*QKLIPP
Trigger: TGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGCAGACAACAAAGAGCTaGCAGAAATTAATTCCACCA +
Preference number: 2 (lower is better)
Translates to: FSKPLPTLALIYMELFNLQTTKS*QKLIPP
Trigger: TGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTTGCTCTTATCTACATaGAGTTGTTCAACCTGCCGA +
Preference number: 2 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYLLLST*SCSTCR
Trigger: TCGGCAGGTTGAACAACTCCATGTAGATAAGAGCAA...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 90 bp CACCGTTATAACAGGCAGCAACTTGTATGTCTAATATTAGACATCTaGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGAAAGCCATT +
Preference number: 2 (lower is better)
Translates to: HRYNRQQLVCLILDI*LSVCRHRNKGLKAI
Trigger: AATGGCTTTCAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATACAAGTTGCTGCCTGTTATAACGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATAACTGCTAAGGACATCTaGAATGTTCAGCACTGTGTA +
Preference number: 2 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLITAKDI*NVQHCV
Trigger: TACACAGTGCTGAACATTTCAGATGTCCTTAGCAGT...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAATGAAGAGACACGCATaGTTCGTTAGAACTGGTGTT +
Preference number: 2 (lower is better)
Translates to: VCLILDILLSVCRHRNKGMKRHA*FVRTGV
Trigger: AACACCAGTTCTAACGAAGCATGCGTGTCTCTTCAT...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTATGAAGAGACACGCATaGTTCGTTAGAACTGGTGTT +
Preference number: 2 (lower is better)
Translates to: SSQHPPQKQTTINRINFIMKRHA*FVRTGV
Trigger: AACACCAGTTCTAACGAAGCATGCGTGTCTCTTCAT...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGCAGACAACAAAGAGCTaGCAGAAATTAATTCCACCA +
Preference number: 2 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRQTTKS*QKLIPP
Trigger: TGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR TCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGATAGAAACAAAGGATTaGAAGCCATTCTCATACAGC +
Preference number: 2 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRIETKD*KPFSYS
Trigger: GCTGTATGAGAATGGCTTTCAATCCTTTGTTTCTAT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR GCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGAATATCTGTAAGAGCTaGATCTACCTATCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRNICKS*IYLSGV
Trigger: TACTCCTGATAGGTAGATGCAGCTCTTACAGATATT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR GCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATATGTGCTGTTACAATGTaGTCCCTGCTATTTATACTC +
Preference number: 2 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLICAVTM*SLLFIL
Trigger: GAGTATAAATAGCAGGGAGCACATTGTAACAGCACA...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGACAGACAACAAAGAGCTaGCAGAAATTAATTCCACCA +
Preference number: 2 (lower is better)
Translates to: VCLILDILLSVCRHRNKGQTTKS*QKLIPP
Trigger: TGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GGTGATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGAGAGGCCGGGGCCGCTaGGGCTCCTTCCAGCGGAGG +
Preference number: 3 (lower is better)
Translates to: GDSSQDIPNKQWPPGLWQRGRGR*GSFQRR
Trigger: CCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTCT...CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTAGAGGCCGGGGCCGCTaGGGCTCCTTCCAGCGGAGG +
Preference number: 3 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTRGRGR*GSFQRR
Trigger: CCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTCT...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp GCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTaGAGAAGGAGTTCGGCTATGACAGCCCCCACGACC +
Preference number: 3 (lower is better)
Translates to: ADSGCGASTLWM*RRSSAMTAPTT
Trigger: GGTCGTGGGGGCTGTCATAGCCGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp GCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTaGATGTGCAGAAGGAGTTCGGCTATGACAGCCCCC +
Preference number: 3 (lower is better)
Translates to: AAADSGCGASTL*MCRRSSAMTAP
Trigger: GGGGGCTGTCATAGCCGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTCAGAGCAGGCCTAACTaGGGTGGAGAGCCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTQSRPN*GGEPSL
Trigger: CAGGCTGGGCTCTCCACCCAAGTTAGGCCTGCTCTG...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LVMSMRFCHMPLRALSPESGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQSGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAAAAAAACACGCTCAGCTaGAGAGGCCGGGGCCGCTTG +
Preference number: 3 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKKNTLS*RGRGRL
Trigger: CAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTTT...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
57% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp TCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGGCCCCCACCTTGAGGTaGGCCCAGATCCTGAGTCTC +
Preference number: 3 (lower is better)
Translates to: SAQQSLTLPLQRGTGYLMAPTLR*AQILSL
Trigger: GAGACTCAGGATCTGGGCCAACCTCAAGGTGGGGGC...CATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGATTAGTTGCTTCCACTaGTGCAGCCTGCTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGISCFH*CSLLKS
Trigger: GCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAAT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAAAAAACACGCTCAGCTaGAGAGGCCGGGGCCGCTTG +
Preference number: 3 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRKNTLS*RGRGRL
Trigger: CAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTTT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp GAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTaGTGTGCCATACCACCAGGCTGCCTGCCTCTAGGA +
Preference number: 3 (lower is better)
Translates to: EGEVPISLAVSF*CAIPPGCLPLG
Trigger: TCCTAGAGGCAGGCAGCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGTCGTCGGGCAGGAATTaGCCGTTACAAATCCCAAAC +
Preference number: 3 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQSSGRN*PLQIPN
Trigger: GTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGA...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp TTAGCACAAATCAGAAGGAGCAATGCACAGATCCACCTGAGCCCCGTGGTCCCAGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: LAQIRRSNAQIHLSPVVPAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...TGGGACCACGGGGCTCAGGTGGATCTGTGCATTGCTCCTTCTGATTTGTGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567346.5
3UTR TCA 72 bp GCACCAGAATTAGTTGCTTCCACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTGAAGCAGCTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: APELVASTCAAC*RAGLRLKQLSS
Trigger: GGAGGAAAGCTGCTTCAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAATTCTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp ACAATGGCCTCCGGGACTCTGGCAGGTAAACACCCATaGAGTAGAAAGGGACTCCAGAAAGGGCAATCCCGA +
Preference number: 3 (lower is better)
Translates to: TMASGTLAGKHP*SRKGLQKGQSR
Trigger: TCGGGATTGCCCTTTCTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp GAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCA +
Preference number: 3 (lower is better)
Translates to: ESWAHRVLLSGF*WLACLPGLRKP
Trigger: TGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp AGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCT +
Preference number: 3 (lower is better)
Translates to: SWAHRVLLSGFC*LACLPGLRKPP
Trigger: AGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTTGTTCATCTGTCCTaGCTGGACCTGAGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQFVHLS*LDLSQV
Trigger: CACTTGGCTCAGGTCCAGCAAGGACAGATGAACAAA...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTATGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 3 (lower is better)
Translates to: HALEGSESRVNCPADILLWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: GWRRMVRKGDCLTVDQFQAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...TTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp GGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTaGCATACCACCAGGCTGCCTGCCTCTAGGAAAACC +
Preference number: 3 (lower is better)
Translates to: GGSHFISSKLLL*HTTRLPASRKT
Trigger: GGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp AGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTaGGAGAAGTCTGTATCCAGCACAGAGGGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: RDPLASLPKRGS*EKSVSSTEGKN
Trigger: ATTTTTCCCCTCTGTGCTGGATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp GCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTaGTCAGCAAATGTCACAGCCACAGCATCACTGCTA +
Preference number: 3 (lower is better)
Translates to: AMGMVQLNMPNV*SANVTATASLL
Trigger: TAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp ACATCAAGCTCAGTCAGGACACAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCAGCCAGGACATTCCGA +
Preference number: 3 (lower is better)
Translates to: TSSSVRTQKQSC*VPLVIAARTFR
Trigger: TCGGAATGTCCTGGCTGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTGTGTCCTGACTGAGCTTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp GCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTaGTCAGCAAATGTCCTGGCACAGTTTAACAAGGCC +
Preference number: 3 (lower is better)
Translates to: AMGMVQLNMPNV*SANVLAQFNKA
Trigger: GGCCTTGTTAAACTGTGCCAGGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563080.1
3UTR-3UTR CAA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAATGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTATGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: HALEGSESRVNCPADILLWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAGCCCCCACCTTGAGGTaGGCCCAGATCCTGAGTCTC +
Preference number: 3 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGAPTLR*AQILSL
Trigger: GAGACTCAGGATCTGGGCCAACCTCAAGGTGGGGGC...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAATTAGTTGCTTCCACTaGTGCAGCCTGCTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: VMSMRFCHMPLRALSPELISCFH*CSLLKS
Trigger: GCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAAT...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGCATCACAAAACAGTaGTACAATCCAATGCAGCCG +
Preference number: 3 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWGITKQ*YNPMQP
Trigger: CGGCTGCATTGGATTGTACAACTGTTTTGTGATGCC...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTCAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGT +
Preference number: 3 (lower is better)
Translates to: MSMRFCHMPLRALSPELTQASQP*HKTPCR
Trigger: ACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTG...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGATGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 3 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACTGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 3 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GCCATGGTGCAATTGAACAGTAAAGCAGGGATAGGTGTAAAACGCTCAATGTGGTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: AMVQLNSKAGIGVKRSMWSGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...CCACATTGAGCGTTTTACACCTATCCCTGCTTTACTGTTCAATTGCACCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ACAGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCTGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: TAMGMVQLNMPNVWSANVWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...GACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: AWVCTAVPHTALTERNRLFNSGE*GPQSLV
Trigger: AACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGCCCCCACCTTGAGGTaGGCCCAGATCCTGAGTCTC +
Preference number: 3 (lower is better)
Translates to: ELSAVMICSVSALCSSRHAPTLR*AQILSL
Trigger: GAGACTCAGGATCTGGGCCAACCTCAAGGTGGGGGC...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTATGTTCTCCAAGCCATaGACAGCTGAGAGAATTCAG +
Preference number: 3 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSMFSKP*TAERIQ
Trigger: CTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACAT...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGAGAGGAACAGGTTATTaGATGACTTGGGCCCATGAG +
Preference number: 3 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRRGTGY*MTWAHE
Trigger: CTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAGGCATCACAAAACAGTaGTACAATCCAATGCAGCCG +
Preference number: 3 (lower is better)
Translates to: VMSMRFCHMPLRALSPELGITKQ*YNPMQP
Trigger: CGGCTGCATTGGATTGTACAACTGTTTTGTGATGCC...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGCAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGT +
Preference number: 3 (lower is better)
Translates to: IACECLLLTVMGEGELHRQASQP*HKTPCR
Trigger: ACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTG...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGAACCTTTGCCTACACTaGCTCTTATCTACATGGAGT +
Preference number: 3 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQNLCLH*LLSTWS
Trigger: ACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GGTGATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGCCACGAAGAACAACCTaGATGAAGCAAAGATGGATG +
Preference number: 3 (lower is better)
Translates to: GDSSQDIPNKQWPPGLWQPRRTT*MKQRWM
Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGG...CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp GGCCCAGGAATTTTTCCTGGCATTCAGGTTCTGTGCTaGAACCACAAGGGAGGGGGAGGTTCCCATTTCATT +
Preference number: 3 (lower is better)
Translates to: GPGIFPGIQVLC*NHKGGGGSHFI
Trigger: AATGAAATGGGAACCTCCCCCTCCCTTGTGGTTTCAGCACAGAACCTGAATGCCAGGAAAAATTCCTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp CGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACAGGGCAACAGCAATGG +
Preference number: 3 (lower is better)
Translates to: RRTTLMKQRWMH*GPQSRTGQQQW
Trigger: CCATTGCTGTTGCCCTGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp GAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTCGGGCAGGAATTTGCC +
Preference number: 3 (lower is better)
Translates to: EVMFLAFRQVSL*IRHPVVGQEFA
Trigger: GGCAAATTCCTGCCCGACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTGAACGCTAAGAACATGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp CTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTaGCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGC +
Preference number: 3 (lower is better)
Translates to: LKGLAPEEPWDG*QLSSDRSHVLS
Trigger: GCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp GCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTTGTACAATCCAATGCA +
Preference number: 3 (lower is better)
Translates to: ASRFFSAQDDSV*GHHKTVVQSNA
Trigger: TGCATTGGATTGTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCTTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTFNSGE*GPQSLV
Trigger: AACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTATGTTCTCCAAGCCATaGACAGCTGAGAGAATTCAG +
Preference number: 3 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTMFSKP*TAERIQ
Trigger: CTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACAT...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTAGAGGAACAGGTTATTaGATGACTTGGGCCCATGAG +
Preference number: 3 (lower is better)
Translates to: MSMRFCHMPLRALSPELTRGTGY*MTWAHE
Trigger: CTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAGGCATCACAAAACAGTaGTACAATCCAATGCAGCCG +
Preference number: 3 (lower is better)
Translates to: REGEVPISLAVSFCCAIPGITKQ*YNPMQP
Trigger: CGGCTGCATTGGATTGTACAACTGTTTTGTGATGCC...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCTCGTCGGGCAGGAATTaGCCGTTACAAATCCCAAAC +
Preference number: 3 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTSSGRN*PLQIPN
Trigger: GTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGA...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCCAGGGAGGTACCTTCTaGCCGCCTCTTTTAGGATTT +
Preference number: 3 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTQGGTF*PPLLGF
Trigger: AAATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTG...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618043.4
3UTR-3UTR CAA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAGTGCCATGGTGCAATaGAACAGTAAAGCAGGGATA +
Preference number: 3 (lower is better)
Translates to: ACECLLLTVMGEGELHRESAMVQ*NSKAGI
Trigger: TATCCCTGCTTTACTGTTCAATTGCACCATGGCACT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp GAGCTGGCAGAAATTAATTCCACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGA +
Preference number: 3 (lower is better)
Translates to: ELAEINSTMKLE*CRDPLASLPKR
Trigger: TCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGTGGAATTAATTTCTGCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp ATTCAGACTGATGGTCTTGTGATGTCCATGAGGTTCTaGCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTA +
Preference number: 3 (lower is better)
Translates to: IQTDGLVMSMRF*HMPLRALSPEL
Trigger: TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAGACCATCAGTCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGTGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: TAVPHTALTERNRLFDDLWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACTTTGTTCATCTGTCCTaGCTGGACCTGAGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNFVHLS*LDLSQV
Trigger: CACTTGGCTCAGGTCCAGCAAGGACAGATGAACAAA...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGAGAGGAACAGGTTATTaGATGACTTGGGCCCATGAG +
Preference number: 3 (lower is better)
Translates to: AVMICSVSALCSSRHGWLRGTGY*MTWAHE
Trigger: CTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCT...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCTGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 3 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp CAGACAACAAAGAGCTGGCAGAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGGATCCTCTGGCTTCGC +
Preference number: 3 (lower is better)
Translates to: QTTKSWQKLIPP*SLSAVGILWLR
Trigger: GCGAAGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp GTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTCCAAAACCTAAGGATA +
Preference number: 3 (lower is better)
Translates to: VTGWRRMVRKGD*LTVDQFQNLRI
Trigger: TATCCTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp CTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTaGGCCCATGAGATGTTCTCCAAGCCATTGACAGCT +
Preference number: 3 (lower is better)
Translates to: LPLQRGTGYLMT*AHEMFSKPLTA
Trigger: AGCTGTCAATGGCTTGGAGAACATCTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR CCA 72 bp TATATGGCCAAGGTTATTCCCTTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACT +
Preference number: 3 (lower is better)
Translates to: YMAKVIPLSVTG*RRMVRKGDCLT
Trigger: AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGGAATAACCTTGGCCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp AAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTaGATAGTAATGGCCATTAGGGCAGAAAGTAGTCTG +
Preference number: 3 (lower is better)
Translates to: KGYQWVPCSNTD*IVMAIRAESSL
Trigger: CAGACTACTTTCTGCCCTAATGGCCATTACTATCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCATGTTCTCCAAGCCATaGACAGCTGAGAGAATTCAG +
Preference number: 3 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLMFSKP*TAERIQ
Trigger: CTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACAT...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGCAGAGCAGGCCTAACTaGGGTGGAGAGCCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRQSRPN*GGEPSL
Trigger: CAGGCTGGGCTCTCCACCCAAGTTAGGCCTGCTCTG...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACAACCTTTGCCTACACTaGCTCTTATCTACATGGAGT +
Preference number: 3 (lower is better)
Translates to: VASSCCSGHHRSKETTQNNLCLH*LLSTWS
Trigger: ACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTT...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTACCATTTTCTAAACCTTaGCCTACACTTGCTCTTATC +
Preference number: 3 (lower is better)
Translates to: HALEGSESRVNCPADILLPFSKP*PTLALI
Trigger: GATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATGG...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTCCACGAAGAACAACCTaGATGAAGCAAAGATGGATG +
Preference number: 3 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPPRRTT*MKQRWM
Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGG...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAAATACAATCAGCCTATaGCATCCTGTAGATGAAGAG +
Preference number: 3 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRNTISL*HPVDEE
Trigger: CTCTTCATCTACAGGATGCAATAGGCTGATTGTATT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTTTTGTTCATCTGTCCTaGCTGGACCTGAGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFFVHLS*LDLSQV
Trigger: CACTTGGCTCAGGTCCAGCAAGGACAGATGAACAAA...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTATTAGTTGCTTCCACTaGTGCAGCCTGCTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFISCFH*CSLLKS
Trigger: GCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAAT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCCTAATATTAGACATCTaGCTTTCTGTCTGTAGGCAT +
Preference number: 3 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTLILDI*LSVCRH
Trigger: ATGCCTACAGACAGAAAGCAAGATGTCTAATATTAG...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp AGTGTAAACAAAGCCAATAAGAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGGGTCAAAAGGCTCCTT +
Preference number: 3 (lower is better)
Translates to: SVNKANKSEHWP*APLYDWVKRLL
Trigger: AAGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACTCTTATTGGCTTTGTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379152.7
ENST00000648130.1
3UTR GCA 72 bp TGTCTGGGGGCATCACAAAACAGTTGTACAATCCAATaGAGCCGTCCTGCTCATACAGTAAGATCCATTAGG +
Preference number: 3 (lower is better)
Translates to: CLGASQNSCTIQ*SRPAHTVRSIR
Trigger: CCTAATGGATCTTACTGTATGAGCAGGACGGCTGCATTGGATTGTACAACTGTTTTGTGATGCCCCCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp AGTAGGAATGTCACCCCATGCTTCACATATGCATTATaGTCTGAACCCAGGGCAACTATGACCATGCTTCCT +
Preference number: 3 (lower is better)
Translates to: SRNVTPCFTYAL*SEPRATMTMLP
Trigger: AGGAAGCATGGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGACATTCCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp AAATCCCAAACCCATGACAGTAGGAATGTCACCCCATaGTTCACATATGCATTATGCTCTGAACCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: KSQTHDSRNVTP*FTYALCSEPRA
Trigger: TGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp CAAATATATGGCCAAGGTTATTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCT +
Preference number: 3 (lower is better)
Translates to: QIYGQGYSLICD*VEKNGQEGRLP
Trigger: AGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGGAATAACCTTGGCCATATATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LLSKDFALQSGTKTDLSESGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYSGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHFNSGE*GPQSLV
Trigger: AACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp TGTGGTCAGAGTCTGACCCAATACCACAGACATTTCTaGGCCCAAAGGGACTCAGTTTTGGGTACTTTGATT +
Preference number: 3 (lower is better)
Translates to: CGQSLTQYHRHF*AQRDSVLGTLI
Trigger: AATCAAAGTACCCAAAACTGAGTCCCTTTGGGCTCAGAAATGTCTGTGGTATTGGGTCAGACTCTGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR TCA 72 bp ATTGTGCTAAACAGCATAAAACCTGTGGTCAGAGTCTaGCCCAATACCACAGACATTTCTGAGCCCAAAGGG +
Preference number: 3 (lower is better)
Translates to: IVLNSIKPVVRV*PNTTDISEPKG
Trigger: CCCTTTGGGCTCAGAAATGTCTGTGGTATTGGGTCAGACTCTGACCACAGGTTTTATGCTGTTTAGCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR TCA 72 bp GAATGTCACCCCATGCTTCACATATGCATTATGCTCTaGACCCAGGGCAACTATGACCATGCTTCCTTCAAT +
Preference number: 3 (lower is better)
Translates to: ECHPMLHICIML*TQGNYDHASFN
Trigger: ATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR GCA 72 bp CGTATGCCTTTCCAAACCATAGCTGCCTTAACTGACTaGCTTGGTGTTTATTCTAGCGTAACATTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: RMPFQTIAALTD*LGVYSSVTLSS
Trigger: ACTGGACAATGTTACGCTAGAATAAACACCAAGGCAGTCAGTTAAGGCAGCTATGGTTTGGAAAGGCATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATAATACAATCAGCCTATaGCATCCTGTAGATGAAGAG +
Preference number: 3 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHNTISL*HPVDEE
Trigger: CTCTTCATCTACAGGATGCAATAGGCTGATTGTATT...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR-3UTR CAA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAAACCTTTGCCTACACTaGCTCTTATCTACATGGAGT +
Preference number: 3 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGNLCLH*LLSTWS
Trigger: ACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTT...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: SSQHPPQKQTTINRINFIAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGTGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGATTAGTTGCTTCCACTaGTGCAGCCTGCTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRISCFH*CSLLKS
Trigger: GCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAAT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp GCTCTTATCTACATGGAGTTGTTCAACCTGCCGAAGTaGTTAAATTCTGTGTACACAGGCCGTATATATTGC +
Preference number: 3 (lower is better)
Translates to: ALIYMELFNLPK*LNSVYTGRIYC
Trigger: GCAATATATACGGCCTGTGTACACAGAATTTAATCACTTCGGCAGGTTGAACAACTCCATGTAGATAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp CTTCCAAACTCTGATAACGGTTGTGAAATTACTGACTaGCTTCCTTTGGCAGTGGGGCCAAGAAACAATATA +
Preference number: 3 (lower is better)
Translates to: LPNSDNGCEITD*LPLAVGPRNNI
Trigger: TATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAGAGTTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGGGCATCACAAAACAGTaGTACAATCCAATGCAGCCG +
Preference number: 3 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRGITKQ*YNPMQP
Trigger: CGGCTGCATTGGATTGTACAACTGTTTTGTGATGCC...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTTCGTCGGGCAGGAATTaGCCGTTACAAATCCCAAAC +
Preference number: 3 (lower is better)
Translates to: SSQHPPQKQTTINRINFISSGRN*PLQIPN
Trigger: GTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGA...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCAGTGCCATGGTGCAATaGAACAGTAAAGCAGGGATA +
Preference number: 3 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTSAMVQ*NSKAGI
Trigger: TATCCCTGCTTTACTGTTCAATTGCACCATGGCACT...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTCACAGGCCGTATATATaGCAGCTAATTAAAACAACA +
Preference number: 3 (lower is better)
Translates to: PVELSAVMICSVSALCSSHRPYI*QLIKTT
Trigger: TGTTGTTTTAATTAGCTGCAATATATACGGCCTGTG...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp CAGGGCAACTATGACCATGCTTCCTTCAATCTTTATTaGGCAAATATATGGCCAAGGTTATTCCCTTATCTG +
Preference number: 3 (lower is better)
Translates to: QGNYDHASFNLY*ANIWPRLFPYL
Trigger: CAGATAAGGGAATAACCTTGGCCATATATTTGCTCAATAAAGATTGAAGGAAGCATGGTCATAGTTGCCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp GGAAAAACAAAGTACCTTCTGAACTTAGCTTTCCACTaGGTAATGTTTACTCTTCACAGCACCCACCACAAA +
Preference number: 3 (lower is better)
Translates to: GKTKYLLNLAFH*VMFTLHSTHHK
Trigger: TTTGTGGTGGGTGCTGTGAAGAGTAAACATTACTCAGTGGAAAGCTAAGTTCAGAAGGTACTTTGTTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CCA 72 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTaGCAGTGGGGCCAAGAAACAATATATATGAATGTG +
Preference number: 3 (lower is better)
Translates to: LITVVKLLTDFL*QWGQETIYMNV
Trigger: CACATTCATATATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: VCLILDILLSVCRHRNKGFNSGE*GPQSLV
Trigger: AACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR-3UTR CAA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTCCACGAAGAACAACCTaGATGAAGCAAAGATGGATG +
Preference number: 3 (lower is better)
Translates to: SSQHPPQKQTTINRINFIPRRTT*MKQRWM
Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGG...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR TCA 72 bp AAGTATCTCTCCTTCATCCTACCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTAAACCTTTGCCTACAC +
Preference number: 3 (lower is better)
Translates to: KYLSFILPAIIL*LYVHFLNLCLH
Trigger: GTGTAGGCAAAGGTTTAGAAAATGGACATAAAGTCAAAGAATGATGGCAGGTAGGATGAAGGAGAGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCGAGGCCGGGGCCGCTTaGGCTCCTTCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTEAGAA*APSSGG
Trigger: ACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTC...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAAGAGGCCGGGGCCGCTTaGGCTCCTTCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKEAGAA*APSSGG
Trigger: ACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTC...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCGGGGAAGGGGAGGCTaGCAGGAGAGGAGTACACTG +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGRGRGG*QERSTL
Trigger: CAGTGTACTCCTCTCCTGCCAGCCTCCCCTTCCCCG...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGGAGGCCGGGGCCGCTTaGGCTCCTTCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QLNMPNVWSANVTATASLEAGAA*APSSGG
Trigger: ACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTC...CAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGGTAAACACCCATGAGGCCGGGGCCGCTTaGGCTCCTTCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QDIPNKQWPPGLWQVNTHEAGAA*APSSGG
Trigger: ACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTC...ATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGGTACCAAGCTCTTCCTaGGACTGCAGCCACCACACC +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGVPSSS*DCSHHT
Trigger: GGTGTGGTGGCTGCAGTCTCAGGAAGAGCTTGGTAC...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGGGTGGTCCCCAGCTCTaGATAACAAAGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGGGPQL*ITKGTH
Trigger: GTGGGTGCCCTTTGTTATGCAGAGCTGGGGACCACC...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAGATGGTAGGTGGGTGTaGGCCTCCCAGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSDGRWV*ASQAPW
Trigger: CCAGGGAGCCTGGGAGGCCCACACCCACCTACCATC...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTRRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: VASSCCSGHHRSKETTQNRRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTCGGGGAAGGGGAGGCTaGCAGGAGAGGAGTACACTG +
Preference number: 4 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSRGRGG*QERSTL
Trigger: CAGTGTACTCCTCTCCTGCCAGCCTCCCCTTCCCCG...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCCTAGAAGCCACTGGTaGGGGGCAGCAAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGPRSHW*GAANSW
Trigger: CCAGGAATTTGCTGCCCCCCACCAGTGGCTTCTAGG...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACATAGGCGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: DLGVSERVLHTCAPLDIGAPWLP*QTVPAH
Trigger: GTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGC...GCCTATGTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR TCA 90 bp CGCTACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACTTTGAGGTGGCGAGCTaGCATCTTCTTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: RYDLGVSERVLHTCAPLDFEVAS*HLLPPG
Trigger: CCCAGGTGGAAGAAGATGTCAGCTCGCCACCTCAAA...GTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR TCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACACGCTCAGCTTaGGAGGCCGGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSKTRSA*EAGAAW
Trigger: CCAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTT...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGAGTCGGAGGTTGCAGTaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQSRRLQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGCAACCTCCGACT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566454.5
ENST00000648130.1
CDS-3UTR GCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGGAGCCCTGGGATGGGTaGCAGCTTAGCTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQEPWDG*QLSSDR
Trigger: TCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTC...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCGCCATACCACCAGGCTaGCTGCCTCTAGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: RKEAAADSGCGASTLWMCAIPPG*LPLGKP
Trigger: GGGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGC...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTACATAAACTCTCCCAGTaGCCCGGCGCCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELHKLSQ*PGAARM
Trigger: CATCCTGGCGGCGCCGGGCCACTGGGAGAGTTTATG...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLARRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCTTTGAGGTGGCGAGCTaGCATCTTCTTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: RKEAAADSGCGASTLWMCFEVAS*HLLPPG
Trigger: CCCAGGTGGAAGAAGATGTCAGCTCGCCACCTCAAA...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGGTTTCGGAGGACCTTTaGGGTGGCGAGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQVSEDL*GGELTS
Trigger: AGATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAAC...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGCGACCTTGGCGTAAGTaGACGTGTCCTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWRPWRK*TCPAHV
Trigger: CACGTGTGCAGGACACGTTCACTTACGCCAAGGTCG...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCCTGGCACAGCGACCTTGGCGTAAGTaGACGTGTCCTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: GMVQLNMPNVWSANVLAQRPWRK*TCPAHV
Trigger: CACGTGTGCAGGACACGTTCACTTACGCCAAGGTCG...CTGTGCCAGGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563080.1
CDS-3UTR TCA 90 bp CGCTACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACCAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: RYDLGVSERVLHTCAPLDQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...GTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR TCA 90 bp GCAGGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGAAAACACGCTCAGCTTaGGAGGCCGGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: AGIGVKRSMWIMDRRSGRKTRSA*EAGAAW
Trigger: CCAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTT...CCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTAGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: AWVCTAVPHTALTERNRLEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCACATAAACTCTCCCAGTaGCCCGGCGCCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPHKLSQ*PGAARM
Trigger: CATCCTGGCGGCGCCGGGCCACTGGGAGAGTTTATG...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACATAAACTCTCCCAGTaGCCCGGCGCCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPHKLSQ*PGAARM
Trigger: CATCCTGGCGGCGCCGGGCCACTGGGAGAGTTTATG...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGACATCTTCTTCCACCTaGGACTGGCTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGTSSST*DWLVLG
Trigger: CCCTAACACCAGCCAGTCCCAGGTGGAAGAAGATGT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CGCTACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACACATCTTCTTCCACCTaGGACTGGCTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: RYDLGVSERVLHTCAPLDTSSST*DWLVLG
Trigger: CCCTAACACCAGCCAGTCCCAGGTGGAAGAAGATGT...GTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR CCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCCAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RKEAAADSGCGASTLWMCQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACCGGGGAAGGGGAGGCTaGCAGGAGAGGAGTACACTG +
Preference number: 4 (lower is better)
Translates to: VASSCCSGHHRSKETTQNRGRGG*QERSTL
Trigger: CAGTGTACTCCTCTCCTGCCAGCCTCCCCTTCCCCG...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCCGGGGAAGGGGAGGCTaGCAGGAGAGGAGTACACTG +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTRGRGG*QERSTL
Trigger: CAGTGTACTCCTCTCCTGCCAGCCTCCCCTTCCCCG...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAAGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKAPWLP*QTVPAH
Trigger: GTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGC...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSAPWLP*QTVPAH
Trigger: GTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGC...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCAAAACACGCTCAGCTTaGGAGGCCGGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLAKTRSA*EAGAAW
Trigger: CCAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTT...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTAGTACACTGTCCCGGTaGCCCACACCAAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRISTLSR*PTPRWL
Trigger: GAGCCACCTTGGTGTGGGTCACCGGGACAGTGTACT...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYTCAAC*RAGLRL
Trigger: CAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGT...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTTCAAC*RAGLRL
Trigger: CAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGT...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTGAAGGAGTTCGGCTATaGCAGCCCCCACGACCTGGA +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIEGVRL*QPPRPG
Trigger: TCCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTC...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGCTGACTACAACAGCCTaGGTGAGGAGGAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQLTTTA*VRRKEA
Trigger: TGCCTCTTTCCTCCTCACTCAGGCTGTTGTAGTCAG...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGAGTCGGAGGTTGCAGTaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRSRRLQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGCAACCTCCGACT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566454.5
ENST00000648130.1
CDS-3UTR GCA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTGGTGGTCCCCAGCTCTaGATAACAAAGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: VIRILLVGLPSRPQKATSGGPQL*ITKGTH
Trigger: GTGGGTGCCCTTTGTTATGCAGAGCTGGGGACCACC...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCGGTGGTCCCCAGCTCTaGATAACAAAGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: MGMVQLNMPNVWSANVTAGGPQL*ITKGTH
Trigger: GTGGGTGCCCTTTGTTATGCAGAGCTGGGGACCACC...GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGAGCAGTCCCTCACACTaGCCTTACAGAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQSSPSH*PYREEQ
Trigger: CTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAGAGCCCTGGGATGGGTaGCAGCTTAGCTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSEPWDG*QLSSDR
Trigger: TCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTC...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGTMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACGCCATACCACCAGGCTaGCTGCCTCTAGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYAIPPG*LPLGKP
Trigger: GGGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGC...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATGCCATACCACCAGGCTaGCTGCCTCTAGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYAIPPG*LPLGKP
Trigger: GGGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGC...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGCCATACCACCAGGCTaGCTGCCTCTAGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTAIPPG*LPLGKP
Trigger: GGGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGC...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGATGTCCATGAGGTTCTaGCACATGCCCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQMSMRF*HMPLRA
Trigger: AGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACATAGGCTCTTCCACCTGGGACTaGCTGGTGTTAGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: DLGVSERVLHTCAPLDIGSSTWD*LVLGTR
Trigger: TCTTGTCCCTAACACCAGCCAGTCCCAGGTGGAAGA...GCCTATGTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR CCA 90 bp CGCTACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACAGAAGAGCCCACCAATaGCCCACACAATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: RYDLGVSERVLHTCAPLDRRAHQ*PTQSVT
Trigger: TGTCACTGATTGTGTGGGCCATTGGTGGGCTCTTCT...GTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR CCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSRRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATGGCCTCCGGGACTCTaGCAGGTAAACACCCATGAA +
Preference number: 4 (lower is better)
Translates to: AWVCTAVPHTALTERNRLWPPGL*QVNTHE
Trigger: TTCATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCA...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGATTCCGAATAAACAATaGCCTCCGGGACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGIPNKQ*PPGLWQ
Trigger: CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAAT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCCCTAGAAGCCACTGGTaGGGGGCAGCAAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSPRSHW*GAANSW
Trigger: CCAGGAATTTGCTGCCCCCCACCAGTGGCTTCTAGG...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCCCTAGAAGCCACTGGTaGGGGGCAGCAAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: DGPAEHAKRLVSKCHSHSPRSHW*GAANSW
Trigger: CCAGGAATTTGCTGCCCCCCACCAGTGGCTTCTAGG...GCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
3UTR CAA 72 bp TGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: WAHRVLLSGFCW*ACLPGLRKPPL
Trigger: CAGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CGCTACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACAAATGGGTCCAGTACTaGGAAGGAAATGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RYDLGVSERVLHTCAPLDKWVQY*EGNEVP
Trigger: GGGGACTTCATTTCCTTCTCAGTACTGGACCCATTT...GTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGAAATGGGTCCAGTACTaGGAAGGAAATGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGKWVQY*EGNEVP
Trigger: GGGGACTTCATTTCCTTCTCAGTACTGGACCCATTT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ACAGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: TAMGMVQLNMPNVWSANVAPWLP*QTVPAH
Trigger: GTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGC...GACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000563080.1
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTAPWLP*QTVPAH
Trigger: GTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGC...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTGTTTCGGAGGACCTTTaGGGTGGCGAGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: VIRILLVGLPSRPQKATSVSEDL*GGELTS
Trigger: AGATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAAC...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTACACGTGTGCCCCACTTaGCATAGGCACAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: AWVCTAVPHTALTERNRLHVCPT*HRHSSQ
Trigger: TTGTGAACTGTGCCTATGTCAAGTGGGGCACACGTG...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTCGACCTTGGCGTAAGTaGACGTGTCCTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTRPWRK*TCPAHV
Trigger: CACGTGTGCAGGACACGTTCACTTACGCCAAGGTCG...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACCGACCTTGGCGTAAGTaGACGTGTCCTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: SNGDGPAEHAKRLVSKCHRPWRK*TCPAHV
Trigger: CACGTGTGCAGGACACGTTCACTTACGCCAAGGTCG...GTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAATGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCTGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCTGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 4 (lower is better)
Translates to: MGMVQLNMPNVWSANVTAWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCATGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGCAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGTCAGAAAGCCACCTCTaGCCTCTAGTCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGSESHL*PLVSFP
Trigger: AGGAAAACTGACTAGAGGTCAGAGGTGGCTTTCTGA...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTAAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 4 (lower is better)
Translates to: HALEGSESRVNCPADILLSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCAGTACACTGTCCCGGTaGCCCACACCAAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLASTLSR*PTPRWL
Trigger: GAGCCACCTTGGTGTGGGTCACCGGGACAGTGTACT...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GWRRMVRKGDCLTVDQFQEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...TTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGGTAAACACCCATACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QDIPNKQWPPGLWQVNTHTCAAC*RAGLRL
Trigger: CAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGT...ATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRITCAAC*RAGLRL
Trigger: CAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGT...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCTGTCATGGGGGAAGGTaGGTTACACAGGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSCHGGR*VTQGGT
Trigger: GGTACCTCCCTGTGTAACTCACCTTCCCCCATGACA...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTATGTCATGGGGGAAGGTaGGTTACACAGGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: HALEGSESRVNCPADILLCHGGR*VTQGGT
Trigger: GGTACCTCCCTGTGTAACTCACCTTCCCCCATGACA...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACTGTCATGGGGGAAGGTaGGTTACACAGGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYCHGGR*VTQGGT
Trigger: GGTACCTCCCTGTGTAACTCACCTTCCCCCATGACA...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTATTCAGGTTCTGTGCTaGAACCACAAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSIQVLC*NHKGGG
Trigger: TCCCCCTCCCTTGTGGTTTCAGCACAGAACCTGAAT...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGATTCAGGTTCTGTGCTaGAACCACAAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWIQVLC*NHKGGG
Trigger: TCCCCCTCCCTTGTGGTTTCAGCACAGAACCTGAAT...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGGAAGGAGTTCGGCTATaGCAGCCCCCACGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SAQQSLTLPLQRGTGYLMEGVRL*QPPRPG
Trigger: TCCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTC...CATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAGGAGTTCGGCTATaGCAGCCCCCACGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSEGVRL*QPPRPG
Trigger: TCCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTC...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGGTGGTCCCCAGCTCTaGATAACAAAGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTGGPQL*ITKGTH
Trigger: GTGGGTGCCCTTTGTTATGCAGAGCTGGGGACCACC...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATGGGATTGCTTGGGTCTaGACAGCAGTCCCTCACACT +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYGIAWV*TAVPHT
Trigger: AGTGTGAGGGACTGCTGTGCAGACCCAAGCAATCCC...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAAGTTGCTTCCACTTGTaGAGCCTGCTGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELSCFHL*SLLKSR
Trigger: CCGGCTCTTCAGCAGGCTGCACAAGTGGAAGCAACT...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCCGTCGGGCAGGAATTTaGCGTTACAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: RKEAAADSGCGASTLWMCRRAGI*RYKSQT
Trigger: GGTTTGGGATTTGTAACGGCAAATTCCTGCCCGACG...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGAGTAAGCTTCTGCTGTaGCATACCACCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LVMSMRFCHMPLRALSPESKLLL*HTTRLP
Trigger: AGGCAGCCTGGTGGTATGGCACAGCAGAAGCTTACT...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGATGTCCATGAGGTTCTaGCACATGCCCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWMSMRF*HMPLRA
Trigger: AGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAACAGGGAGTCGGAGGTTaGAGTGAGCCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: GWRRMVRKGDCLTVDQFQQGVGG*SEPRSR
Trigger: GCGTGATCTTGGCTCACTGCAACCTCCGACTCCCTG...TTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566454.5
ENST00000648130.1
CDS-3UTR CCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTTGCTCAGAGTGTCCCTaGCACAGTTTAACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSCSECP*HSLTRP
Trigger: GGGCCTTGTTAAACTGTGCCAGGGACACTCTGAGCA...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFRRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTATGGCCTCCGGGACTCTaGCAGGTAAACACCCATGAA +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELWPPGL*QVNTHE
Trigger: TTCATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCA...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGATTCCGAATAAACAATaGCCTCCGGGACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQIPNKQ*PPGLWQ
Trigger: CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAAT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGGTTGGGATTGCTTaGGTCTGCACAGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKQVGIA*VCTAVP
Trigger: AGGGACTGCTGTGCAGACCCAAGCAATCCCAACCTG...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTACAGCCCCCACGACCTaGATTCAGACTGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSTAPTT*IQTDGL
Trigger: AAGACCATCAGTCTGAATCCAGGTCGTGGGGGCTGT...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGTGATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGACAGCCCCCACGACCTaGATTCAGACTGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: GDSSQDIPNKQWPPGLWQTAPTT*IQTDGL
Trigger: AAGACCATCAGTCTGAATCCAGGTCGTGGGGGCTGT...CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTAGGAGCAAGTACCCTCTaGATGTGCAGAAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: AWVCTAVPHTALTERNRLGASTL*MCRRSS
Trigger: CGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCC...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLAAPWLP*QTVPAH
Trigger: GTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGC...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCTTTGAGGTGGCGAGCTaGCATCTTCTTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTFEVAS*HLLPPG
Trigger: CCCAGGTGGAAGAAGATGTCAGCTCGCCACCTCAAA...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTCGACCTTGGCGTAAGTaGACGTGTCCTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSRPWRK*TCPAHV
Trigger: CACGTGTGCAGGACACGTTCACTTACGCCAAGGTCG...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCCGACCTTGGCGTAAGTaGACGTGTCCTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLARPWRK*TCPAHV
Trigger: CACGTGTGCAGGACACGTTCACTTACGCCAAGGTCG...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGCCCTCAAAGGCGTCCTaGAAGTGCTCAGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: IACECLLLTVMGEGELHRPSKAS*KCSECP
Trigger: GGGACACTCTGAGCACTTTCAGGACGCCTTTGAGGG...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAAAGGGTGTCCCAACCTaGGTAAGAGAAGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSKGVPT*VREEGR
Trigger: TCTGCCCTCTTCTCTTACTCAGGTTGGGACACCCTT...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR TCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCATGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTACAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTACAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: HALEGSESRVNCPADILLQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCAAAACACGCTCAGCTTaGGAGGCCGGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPKTRSA*EAGAAW
Trigger: CCAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTT...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 4 (lower is better)
Translates to: ESCYQDFAGWPAFQASESSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...GCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGGTAAACACCCATAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 4 (lower is better)
Translates to: QDIPNKQWPPGLWQVNTHSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...ATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGGATGACTTGGGCCCATaGGATGTTCTCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEDDLGP*DVLQAI
Trigger: AATGGCTTGGAGAACATCTCATGGGCCCAAGTCATC...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGTACCAAGCTCTTCCTaGGACTGCAGCCACCACACC +
Preference number: 4 (lower is better)
Translates to: IACECLLLTVMGEGELHRVPSSS*DCSHHT
Trigger: GGTGTGGTGGCTGCAGTCTCAGGAAGAGCTTGGTAC...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTCACCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACCGTACCAAGCTCTTCCTaGGACTGCAGCCACCACACC +
Preference number: 4 (lower is better)
Translates to: VTPCFTYALCSEPRATMTVPSSS*DCSHHT
Trigger: GGTGTGGTGGCTGCAGTCTCAGGAAGAGCTTGGTAC...GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTACCTCCCAGTCTTCACTaGTCTCCACAGGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: HALEGSESRVNCPADILLPPSLH*SPQGEN
Trigger: GTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAGG...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCCCTCCCAGTCTTCACTaGTCTCCACAGGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTPPSLH*SPQGEN
Trigger: GTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAGG...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACGTGGAGAGCCCAGCCTaGGCACCAGAATTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYVESPA*APELVA
Trigger: AGCAACTAATTCTGGTGCTCAGGCTGGGCTCTCCAC...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGTGGAGAGCCCAGCCTaGGCACCAGAATTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTVESPA*APELVA
Trigger: AGCAACTAATTCTGGTGCTCAGGCTGGGCTCTCCAC...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAGTGGAGAGCCCAGCCTaGGCACCAGAATTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRVESPA*APELVA
Trigger: AGCAACTAATTCTGGTGCTCAGGCTGGGCTCTCCAC...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTACTGACTACAACAGCCTaGGTGAGGAGGAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELLTTTA*VRRKEA
Trigger: TGCCTCTTTCCTCCTCACTCAGGCTGTTGTAGTCAG...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATCTGACTACAACAGCCTaGGTGAGGAGGAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYLTTTA*VRRKEA
Trigger: TGCCTCTTTCCTCCTCACTCAGGCTGTTGTAGTCAG...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACATAGGCCTGCACACCTGTGTTTaGTGTGGCCTGTCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: DLGVSERVLHTCAPLDIGLHTCV*CGLSRN
Trigger: ATTTCTTGACAGGCCACAGCAAACACAGGTGTGCAG...GCCTATGTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563080.1
CDS-3UTR GCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGTTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAAAGCAGTCCCTCACACTaGCCTTACAGAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKSSPSH*PYREEQ
Trigger: CTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCT...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCGGGATTGCTTGGGTCTaGACAGCAGTCCCTCACACT +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTGIAWV*TAVPHT
Trigger: AGTGTGAGGGACTGCTGTGCAGACCCAAGCAATCCC...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCAGTTGCTTCCACTTGTaGAGCCTGCTGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: ESCYQDFAGWPAFQASESSCFHL*SLLKSR
Trigger: CCGGCTCTTCAGCAGGCTGCACAAGTGGAAGCAACT...GCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGTGATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTC +
Preference number: 4 (lower is better)
Translates to: GDSSQDIPNKQWPPGLWQVRKGD*LTVDQF
Trigger: GAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGAC...CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTC +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWVRKGD*LTVDQF
Trigger: GAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGAC...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGGAGTCCAGAGTTAACTaGCCTGCTGACATCCTGTTA +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQESRVN*PADILL
Trigger: TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTC...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAATGTCCATGAGGTTCTaGCACATGCCCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSMSMRF*HMPLRA
Trigger: AGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTAGTACCCTCTGGATGTaGAGAAGGAGTTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSSTLWM*RRSSAM
Trigger: CATAGCCGAACTCCTTCTGCACATCCAGAGGGTACT...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGAGTACCCTCTGGATGTaGAGAAGGAGTTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQSTLWM*RRSSAM
Trigger: CATAGCCGAACTCCTTCTGCACATCCAGAGGGTACT...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTATCTTCCACCTGGGACTaGCTGGTGTTAGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELSSTWD*LVLGTR
Trigger: TCTTGTCCCTAACACCAGCCAGTCCCAGGTGGAAGA...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAGGAGGACCTTTGAGGTaGCGAGCTGACATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELGGPLR*RADIFF
Trigger: GAAGAAGATGTCAGCTCGCCACCTCAAAGGTCCTCC...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCATGCTCAGAGTGTCCCTaGCACAGTTTAACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSCSECP*HSLTRP
Trigger: GGGCCTTGTTAAACTGTGCCAGGGACACTCTGAGCA...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR CCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGATATGCAGAACACGATaGGGAAAAACACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGICRTR*GKTRSA
Trigger: AGCTGAGCGTGTTTTTCCCCATCGTGTTCTGCATAT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTCAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGACAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTTTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSLSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AWVCTAVPHTALTERNRLLSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp GTCACCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACCCCTAGAAGCCACTGGTaGGGGGCAGCAAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: VTPCFTYALCSEPRATMTPRSHW*GAANSW
Trigger: CCAGGAATTTGCTGCCCCCCACCAGTGGCTTCTAGG...GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCCCTAGAAGCCACTGGTaGGGGGCAGCAAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLPRSHW*GAANSW
Trigger: CCAGGAATTTGCTGCCCCCCACCAGTGGCTTCTAGG...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGCCAAAGAGAGGATCCTaGGAGAAGTCTGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWPKRGS*EKSVSS
Trigger: GCTGGATACAGACTTCTCCCAGGATCCTCTCTTTGG...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGTGGGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GIGVKRSMWIMDRRSGRWAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...CCACCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTCTGACTGACTTCCTTTaGCAGTGGGGCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSLTDFL*QWGQET
Trigger: TGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAG...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCGGAGCAAGTACCCTCTaGATGTGCAGAAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSGASTL*MCRRSS
Trigger: CGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCC...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGGAGCAAGTACCCTCTaGATGTGCAGAAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTGASTL*MCRRSS
Trigger: CGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCC...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCAGCAGACAGCGGATGTaGAGCAAGTACCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: MGMVQLNMPNVWSANVTASRQRM*SKYPLD
Trigger: ATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCT...GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGCACCTGTGTTTGCTGTaGCCTGTAATCCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRHLCLL*PVIPTQ
Trigger: CTGAGTGGGGATTACAGGCCACAGCAAACACAGGTG...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566454.5
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCGTTTCGGAGGACCTTTaGGGTGGCGAGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTVSEDL*GGELTS
Trigger: AGATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAAC...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CACAGTTTAACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGCACGTGTGCCCCACTTaGCATAGGCACAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: HSLTRPMTMMAMSATTLAHVCPT*HRHSSQ
Trigger: TTGTGAACTGTGCCTATGTCAAGTGGGGCACACGTG...CGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTTAAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR TCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTAAGGGTGTCCCAACCTaGGTAAGAGAAGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTKGVPT*VREEGR
Trigger: TCTGCCCTCTTCTCTTACTCAGGTTGGGACACCCTT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCTGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTGAGCCCCGTGGTCCCAGCAAAGCTTACATTGAACAGTAAAGCAGGGATAGGTCAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LSPVVPAKLTLNSKAGIGQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...ACCTATCCCTGCTTTACTGTTCAATGTAAGCTTTGCTGGGACCACGGGGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567346.5
CDS-3UTR TCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTTCAGAAAGCCACCTCTaGCCTCTAGTCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSSESHL*PLVSFP
Trigger: AGGAAAACTGACTAGAGGTCAGAGGTGGCTTTCTGA...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATCTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYLSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACGGTTGGCCCAGATCCTaGGTCTCCTATAGCTTACCA +
Preference number: 4 (lower is better)
Translates to: SNGDGPAEHAKRLVSKCHGWPRS*VSYSLP
Trigger: TGGTAAGCTATAGGAGACTCAGGATCTGGGCCAACC...GTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618043.4
CDS-3UTR TCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGTACCACAGACATTTCTaGGCCCAAAGGGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWYHRHF*AQRDSV
Trigger: AACTGAGTCCCTTTGGGCTCAGAAATGTCTGTGGTA...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTACCACAGACATTTCTaGGCCCAAAGGGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQYHRHF*AQRDSV
Trigger: AACTGAGTCCCTTTGGGCTCAGAAATGTCTGTGGTA...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACGATGACTTGGGCCCATaGGATGTTCTCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYDDLGP*DVLQAI
Trigger: AATGGCTTGGAGAACATCTCATGGGCCCAAGTCATC...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp AGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGGAGCATGAGCCGGACTCAGGTTaGAGCAGCTTTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RELMVSVKRGTITRNTEHEPDSG*SSFPPS
Trigger: ACTGGGAGGAAAGCTGCTTCAACCTGAGTCCGGCTC...ATGCTCCGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTACCCTCATAGCCTGTaGGTGTCTCTTACTCACTGT +
Preference number: 4 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEYPHSL*VSLTHC
Trigger: ACAGTGAGTAAGAGACACTCACAGGCTATGAGGGTA...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTTGGCTGCTGAGCACTTaGAATGTGATTAGCGCAACT +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSWLLST*NVISAT
Trigger: AGTTGCGCTAATCACATTTCAAGTGCTCAGCAGCCA...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGATTCAGGTTCTGTGCTaGAACCACAAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QLNMPNVWSANVTATASLIQVLC*NHKGGG
Trigger: TCCCCCTCCCTTGTGGTTTCAGCACAGAACCTGAAT...CAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACATTCAGGTTCTGTGCTaGAACCACAAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SNGDGPAEHAKRLVSKCHIQVLC*NHKGGG
Trigger: TCCCCCTCCCTTGTGGTTTCAGCACAGAACCTGAAT...GTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGGACCTGGATTCAGACTaGTGGTCTTGTGATGTCCAT +
Preference number: 4 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQDLDSD*WSCDVH
Trigger: ATGGACATCACAAGACCATCAGTCTGAATCCAGGTC...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGTCAGGTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATGAAGGAGTTCGGCTATaGCAGCCCCCACGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SQVLYLVREKLPIKQPLYEGVRL*QPPRPG
Trigger: TCCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTC...ATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACACCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCATGCACAGATCCACCTaGGCCCCGTGGTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSMHRST*APWSQQ
Trigger: TTGCTGGGACCACGGGGCTCAGGTGGATCTGTGCAT...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567346.5
CDS-3UTR GCA 90 bp GGTGATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGCTGCACACCTGTGTTTaGTGTGGCCTGTCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: GDSSQDIPNKQWPPGLWQLHTCV*CGLSRN
Trigger: ATTTCTTGACAGGCCACAGCAAACACAGGTGTGCAG...CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379152.7
ENST00000618043.4
CDS-3UTR GCA 90 bp TTTAACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTGGTGGTCCCCAGCTCTaGATAACAAAGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: FNKAHDNDGNERYDLGVSGGPQL*ITKGTH
Trigger: GTGGGTGCCCTTTGTTATGCAGAGCTGGGGACCACC...ACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR GCA 90 bp AACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAGGTGGTCCCCAGCTCTaGATAACAAAGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: NVWSANVTATASLLRTSEGGPQL*ITKGTH
Trigger: GTGGGTGCCCTTTGTTATGCAGAGCTGGGGACCACC...TTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000566579.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCGATGAGGTAGATGAGTaGCATGGTGCAATTGAACAG +
Preference number: 4 (lower is better)
Translates to: RKEAAADSGCGASTLWMCDEVDE*HGAIEQ
Trigger: CTGTTCAATTGCACCATGGCACTCATCTACCTCATC...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ACAGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCAGCAGTCCCTCACACTaGCCTTACAGAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: TAMGMVQLNMPNVWSANVSSPSH*PYREEQ
Trigger: CTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCT...GACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618043.4
CDS-3UTR GCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCAGTTGCTTCCACTTGTaGAGCCTGCTGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLSCFHL*SLLKSR
Trigger: CCGGCTCTTCAGCAGGCTGCACAAGTGGAAGCAACT...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACCGTCGGGCAGGAATTTaGCGTTACAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYRRAGI*RYKSQT
Trigger: GGTTTGGGATTTGTAACGGCAAATTCCTGCCCGACG...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: DGPAEHAKRLVSKCHSHSRQVSL*IRHPVV
Trigger: GACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCT...GCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGGCCATACCACCAGGCTaGCTGCCTCTAGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: TAVPHTALTERNRLFDDLAIPPG*LPLGKP
Trigger: GGGTTTTCCTAGAGGCAGGCAGCCTGGTGGTATGGC...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCAAGTAAGCTTCTGCTGTaGCATACCACCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPSKLLL*HTTRLP
Trigger: AGGCAGCCTGGTGGTATGGCACAGCAGAAGCTTACT...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTATGTCCATGAGGTTCTaGCACATGCCCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTMSMRF*HMPLRA
Trigger: AGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACCAGGGAGTCGGAGGTTaGAGTGAGCCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNQGVGG*SEPRSR
Trigger: GCGTGATCTTGGCTCACTGCAACCTCCGACTCCCTG...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566454.5
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAACATCTTCTTCCACCTaGGACTGGCTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GWRRMVRKGDCLTVDQFQTSSST*DWLVLG
Trigger: CCCTAACACCAGCCAGTCCCAGGTGGAAGAAGATGT...TTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGTGGACATCTTCTTCCACCTaGGACTGGCTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GIGVKRSMWIMDRRSGRWTSSST*DWLVLG
Trigger: CCCTAACACCAGCCAGTCCCAGGTGGAAGAAGATGT...CCACCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCGATGAGCGTCACAATTaGCATAGAAATCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: RKEAAADSGCGASTLWMCDERHN*HRNPNG
Trigger: GCCATTGGGATTTCTATGCCAATTGTGACGCTCATC...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGTGGCCTCCGGGACTCTaGCAGGTAAACACCCATGAA +
Preference number: 4 (lower is better)
Translates to: IACECLLLTVMGEGELHRWPPGL*QVNTHE
Trigger: TTCATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCA...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCCAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSQKQSC*VPLVIA
Trigger: TGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTG...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTCAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: VIRILLVGLPSRPQKATSQKQSC*VPLVIA
Trigger: TGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTG...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTCAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTQKQSC*VPLVIA
Trigger: TGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTG...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCCAGGATTTTGCTGGTTaGCCTGCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLQDFAG*PAFQAS
Trigger: TGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTG...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACATATTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YDLGVSERVLHTCAPLDILSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...TATGTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTACTGACTGACTTCCTTTaGCAGTGGGGCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELLTDFL*QWGQET
Trigger: TGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAG...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACCTGACTGACTTCCTTTaGCAGTGGGGCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYLTDFL*QWGQET
Trigger: TGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAG...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTACAGCCCCCACGACCTaGATTCAGACTGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTTAPTT*IQTDGL
Trigger: AAGACCATCAGTCTGAATCCAGGTCGTGGGGGCTGT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTAGCAGACAGCGGATGTaGAGCAAGTACCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTSRQRM*SKYPLD
Trigger: ATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAAATGGGTCCAGTACTaGGAAGGAAATGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHREKWVQY*EGNEVP
Trigger: GGGGACTTCATTTCCTTCTCAGTACTGGACCCATTT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACAAATGGGTCCAGTACTaGGAAGGAAATGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYKWVQY*EGNEVP
Trigger: GGGGACTTCATTTCCTTCTCAGTACTGGACCCATTT...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTTAACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTGTTTCGGAGGACCTTTaGGGTGGCGAGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: FNKAHDNDGNERYDLGVSVSEDL*GGELTS
Trigger: AGATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAAC...ACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACGTTTCGGAGGACCTTTaGGGTGGCGAGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNVSEDL*GGELTS
Trigger: AGATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAAC...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCCCCTCAAAGGCGTCCTaGAAGTGCTCAGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFPSKAS*KCSECP
Trigger: GGGACACTCTGAGCACTTTCAGGACGCCTTTGAGGG...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR TCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGAAGGGTGTCCCAACCTaGGTAAGAGAAGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IACECLLLTVMGEGELHRKGVPT*VREEGR
Trigger: TCTGCCCTCTTCTCTTACTCAGGTTGGGACACCCTT...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR TCA 90 bp TTTAACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTTGGGGATGGTCCAGCTaGACATGCCAAACGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FNKAHDNDGNERYDLGVSWGWSS*TCQTSG
Trigger: ACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCA...ACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR TCA 90 bp CAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGGTAAACACCCATGCAGGTAAACACCCATaGAGTAGAAAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: QDIPNKQWPPGLWQVNTHAGKHP*SRKGLQ
Trigger: CTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGC...ATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGTCAGAAAGCCACCTCTaGCCTCTAGTCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRSESHL*PLVSFP
Trigger: AGGAAAACTGACTAGAGGTCAGAGGTGGCTTTCTGA...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCCTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTLSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGTGGCTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GIGVKRSMWIMDRRSGRWLSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...CCACCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTGGTTGGCCCAGATCCTaGGTCTCCTATAGCTTACCA +
Preference number: 4 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPGWPRS*VSYSLP
Trigger: TGGTAAGCTATAGGAGACTCAGGATCTGGGCCAACC...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCGGTTGGCCCAGATCCTaGGTCTCCTATAGCTTACCA +
Preference number: 4 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTGWPRS*VSYSLP
Trigger: TGGTAAGCTATAGGAGACTCAGGATCTGGGCCAACC...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGATTGCATCCTGTAGATaGAGAGACACGCATGCTTCG +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHREIASCR*RDTHAS
Trigger: CGAAGCATGCGTGTCTCTTCATCTACAGGATGCAAT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACCCTGTGGTCAGAGTCTaGCCCAATACCACAGACATT +
Preference number: 4 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYPVVRV*PNTTDI
Trigger: AATGTCTGTGGTATTGGGTCAGACTCTGACCACAGG...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCCAAGCCATTGACAGCTaGGAGAATTCAGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTQAIDS*ENSGDP
Trigger: TGGATCACCTGAATTCTCTCAGCTGTCAATGGCTTG...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTATGTTCTCCAAGCCATTaGCAGCTGAGAGAATTCAGG +
Preference number: 4 (lower is better)
Translates to: HALEGSESRVNCPADILLCSPSH*QLREFR
Trigger: CCTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACA...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGTTCAGAAAAGTGAAATaGCCTAGCACCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWFRKVK*PSTRLG
Trigger: TCCCAACCTGGTGCTAGGTCATTTCACTTTTCTGAA...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGATGCAGCCTGATGTaGGGTTTTCAGAAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWGCSLM*GFQKSE
Trigger: TTCACTTTTCTGAAAACCTCACATCAGGCTGCATCC...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAGTACCAAGCTCTTCCTaGGACTGCAGCCACCACACC +
Preference number: 4 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEVPSSS*DCSHHT
Trigger: GGTGTGGTGGCTGCAGTCTCAGGAAGAGCTTGGTAC...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCCCTCCCAGTCTTCACTaGTCTCCACAGGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTPPSLH*SPQGEN
Trigger: GTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAGG...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACGTGGAGAGCCCAGCCTaGGCACCAGAATTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDVESPA*APELVA
Trigger: AGCAACTAATTCTGGTGCTCAGGCTGGGCTCTCCAC...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHRENPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGAAAATGAAAGGAGGATaGCATGGCTCACTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQKMKGG*HGSLSK
Trigger: CTTGCTTAGTGAGCCATGTCATCCTCCTTTCATTTT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAATGTCATGGGGGAAGGTaGGTTACACAGGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: NVWSANVTATASLLRTSECHGGR*VTQGGT
Trigger: GGTACCTCCCTGTGTAACTCACCTTCCCCCATGACA...TTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTATACCCTCATAGCCTGTaGGTGTCTCTTACTCACTGT +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELYPHSL*VSLTHC
Trigger: ACAGTGAGTAAGAGACACTCACAGGCTATGAGGGTA...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCATACCCTCATAGCCTGTaGGTGTCTCTTACTCACTGT +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSYPHSL*VSLTHC
Trigger: ACAGTGAGTAAGAGACACTCACAGGCTATGAGGGTA...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTCATAGCTGCCTTAACTaGCTGCCTTGGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSHSCLN*LPWCLF
Trigger: GAATAAACACCAAGGCAGTCAGTTAAGGCAGCTATG...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGCATAGCTGCCTTAACTaGCTGCCTTGGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWHSCLN*LPWCLF
Trigger: GAATAAACACCAAGGCAGTCAGTTAAGGCAGCTATG...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTGGGCAGAAAGTAGTCTaGGCAGTGGGAGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: VIRILLVGLPSRPQKATSGQKVV*AVGDFS
Trigger: ACTAAAATCTCCCACTGCTCAGACTACTTTCTGCCC...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGGGCAGAAAGTAGTCTaGGCAGTGGGAGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTGQKVV*AVGDFS
Trigger: ACTAAAATCTCCCACTGCTCAGACTACTTTCTGCCC...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACACCATCCCACCACAGTaGAAACTTATGTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYTIPPQ*KLMLGE
Trigger: CTCCCCTAACATAAGTTTTCACTGTGGTGGGATGGT...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTAGACCTGGATTCAGACTaGTGGTCTTGTGATGTCCAT +
Preference number: 4 (lower is better)
Translates to: HALEGSESRVNCPADILLDLDSD*WSCDVH
Trigger: ATGGACATCACAAGACCATCAGTCTGAATCCAGGTC...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGCTAATTCCACTTGTCTaGCTCGGCCACATAAACTCT +
Preference number: 4 (lower is better)
Translates to: LVMSMRFCHMPLRALSPELIPLV*LGHINS
Trigger: AGAGTTTATGTGGCCGAGGCAGACAAGTGGAATTAG...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCGGTGGTCCCCAGCTCTaGATAACAAAGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSGGPQL*ITKGTH
Trigger: GTGGGTGCCCTTTGTTATGCAGAGCTGGGGACCACC...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000566579.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAATGTCAGCAGACATATaGAAGCAGCAGCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPMSADI*KQQPGD
Trigger: GTCTCCTGGCTGCTGCTTGCATATGTCTGCTGACAT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACATGTCAGCAGACATATaGAAGCAGCAGCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VASSCCSGHHRSKETTQNMSADI*KQQPGD
Trigger: GTCTCCTGGCTGCTGCTTGCATATGTCTGCTGACAT...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGATGAGGTAGATGAGTaGCATGGTGCAATTGAACAG +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWDEVDE*HGAIEQ
Trigger: CTGTTCAATTGCACCATGGCACTCATCTACCTCATC...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSLLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACAGTTGCTTCCACTTGTaGAGCCTGCTGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDSCFHL*SLLKSR
Trigger: CCGGCTCTTCAGCAGGCTGCACAAGTGGAAGCAACT...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp AACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAAGTTGCTTCCACTTGTaGAGCCTGCTGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: NVWSANVTATASLLRTSESCFHL*SLLKSR
Trigger: CCGGCTCTTCAGCAGGCTGCACAAGTGGAAGCAACT...TTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACAGCACCAGAATTAGTTaGTTCCACTTGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYSTRIS*FHLCSL
Trigger: CAGGCTGCACAAGTGGAAGCAACTAATTCTGGTGCT...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGCCAATGCAGCCGTCCTaGTCATACAGTAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRPMQPS*SYSKIH
Trigger: ATGGATCTTACTGTATGAGCAGGACGGCTGCATTGG...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTACCAATGCAGCCGTCCTaGTCATACAGTAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELPMQPS*SYSKIH
Trigger: ATGGATCTTACTGTATGAGCAGGACGGCTGCATTGG...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCCCAATGCAGCCGTCCTaGTCATACAGTAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTPMQPS*SYSKIH
Trigger: ATGGATCTTACTGTATGAGCAGGACGGCTGCATTGG...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGGTAAACACCCATGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTC +
Preference number: 4 (lower is better)
Translates to: QDIPNKQWPPGLWQVNTHVRKGD*LTVDQF
Trigger: GAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGAC...ATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGTTCACATATGCATTATaGTCTGAACCCAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQFTYAL*SEPRAT
Trigger: AGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAA...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTRQVSL*IRHPVV
Trigger: GACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCT...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGCTGCCTTAACTGACTaGCTTGGTGTTTATTCTAGC +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSAALTD*LGVYSS
Trigger: GCTAGAATAAACACCAAGGCAGTCAGTTAAGGCAGC...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGAGTAAGCTTCTGCTGTaGCATACCACCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AVMICSVSALCSSRHGWLSKLLL*HTTRLP
Trigger: AGGCAGCCTGGTGGTATGGCACAGCAGAAGCTTACT...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGTGGTTAGCAGTAAGCTTCTaGTGTGCCATACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GIGVKRSMWIMDRRSGRWLAVSF*CAIPPG
Trigger: GCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAA...CCACCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACGAGTCCAGAGTTAACTaGCCTGCTGACATCCTGTTA +
Preference number: 4 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYESRVN*PADILL
Trigger: TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTC...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAAGAGAAGGGGCTCCTaGAGTAGCCTAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHREKRRGS*SSLGKS
Trigger: TGATTTTCCTAGGCTACTGCAGGAGCCCCTTCTCTT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTAAGAGAAGGGGCTCCTaGAGTAGCCTAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTKRRGS*SSLGKS
Trigger: TGATTTTCCTAGGCTACTGCAGGAGCCCCTTCTCTT...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCAAGAGAAGGGGCTCCTaGAGTAGCCTAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: DGPAEHAKRLVSKCHSHSKRRGS*SSLGKS
Trigger: TGATTTTCCTAGGCTACTGCAGGAGCCCCTTCTCTT...GCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTCTTCCACCTGGGACTaGCTGGTGTTAGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLASSTWD*LVLGTR
Trigger: TCTTGTCCCTAACACCAGCCAGTCCCAGGTGGAAGA...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCGGAGGACCTTTGAGGTaGCGAGCTGACATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLAGGPLR*RADIFF
Trigger: GAAGAAGATGTCAGCTCGCCACCTCAAAGGTCCTCC...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTGAAGGAGGACCTTTGAGGTaGCGAGCTGACATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NKAHDNDGNERYDLGVSEGGPLR*RADIFF
Trigger: GAAGAAGATGTCAGCTCGCCACCTCAAAGGTCCTCC...TTCACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR CCA 90 bp TCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGGGAGGACCTTTGAGGTaGCGAGCTGACATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SAQQSLTLPLQRGTGYLMGGPLR*RADIFF
Trigger: GAAGAAGATGTCAGCTCGCCACCTCAAAGGTCCTCC...CATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGATGAGCGTCACAATTaGCATAGAAATCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSDERHN*HRNPNG
Trigger: GCCATTGGGATTTCTATGCCAATTGTGACGCTCATC...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTAACATGCCAAACGTCTaGTCAGCAAATGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: VIRILLVGLPSRPQKATSNMPNV*SANVTA
Trigger: GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTT...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCAACATGCCAAACGTCTaGTCAGCAAATGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: MGMVQLNMPNVWSANVTANMPNV*SANVTA
Trigger: GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTT...GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCAACATGCCAAACGTCTaGTCAGCAAATGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: DGPAEHAKRLVSKCHSHSNMPNV*SANVTA
Trigger: GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTT...GCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAACATGCCAAACGTCTaGTCAGCAAATGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTNMPNV*SANVTA
Trigger: GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTT...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTATATGCAGAACACGATaGGGAAAAACACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSICRTR*GKTRSA
Trigger: AGCTGAGCGTGTTTTTCCCCATCGTGTTCTGCATAT...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACATTCCGAATAAACAATaGCCTCCGGGACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SNGDGPAEHAKRLVSKCHIPNKQ*PPGLWQ
Trigger: CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAAT...GTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCCAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTQKQSC*VPLVIA
Trigger: TGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTG...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACTTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYLSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGGTTATTTGATGACTTaGGCCCATGAGATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSGYLMT*AHEMFS
Trigger: GGAGAACATCTCATGGGCCCAAGTCATCAAATAACC...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACCAGGTTGGGATTGCTTaGGTCTGCACAGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDQVGIA*VCTAVP
Trigger: AGGGACTGCTGTGCAGACCCAAGCAATCCCAACCTG...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHREQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 4 (lower is better)
Translates to: VIRILLVGLPSRPQKATSSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATCTTACTCACTGTCATaGGGGAAGGTGAGTTACACA +
Preference number: 4 (lower is better)
Translates to: AWVCTAVPHTALTERNRLSYSLS*GKVSYT
Trigger: TGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGA...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCGACTTCCTTTGGCAGTaGGGCCAAGAAACAATATAT +
Preference number: 4 (lower is better)
Translates to: RKEAAADSGCGASTLWMCDFLWQ*GQETIY
Trigger: ATATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTC...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTCTGACTGACTTCCTTTaGCAGTGGGGCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRILTDFL*QWGQET
Trigger: TGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAG...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGACTGACTGACTTCCTTTaGCAGTGGGGCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRLTDFL*QWGQET
Trigger: TGTTTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAG...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGACAGCCCCCACGACCTaGATTCAGACTGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: IACECLLLTVMGEGELHRTAPTT*IQTDGL
Trigger: AAGACCATCAGTCTGAATCCAGGTCGTGGGGGCTGT...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCGGAGCAAGTACCCTCTaGATGTGCAGAAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLGASTL*MCRRSS
Trigger: CGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCC...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ACAGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCGGTCAGCAAATGTCCTaGCACAGTTTAACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: TAMGMVQLNMPNVWSANVGQQMS*HSLTRP
Trigger: GGGCCTTGTTAAACTGTGCCAGGACATTTGCTGACC...GACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563080.1
3UTR CAA 72 bp CCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTaGTACAATCCAATGCAGCCGTCCTGCTCATACAGT +
Preference number: 4 (lower is better)
Translates to: PRMTVSGGITKQ*YNPMQPSCSYS
Trigger: ACTGTATGAGCAGGACGGCTGCATTGGATTGTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAAATGGGTCCAGTACTaGGAAGGAAATGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SNGDGPAEHAKRLVSKCHKWVQY*EGNEVP
Trigger: GGGGACTTCATTTCCTTCTCAGTACTGGACCCATTT...GTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGCACGTGTGCCCCACTTaGCATAGGCACAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: PMRELMVSVKRGTITRNTHVCPT*HRHSSQ
Trigger: TTGTGAACTGTGCCTATGTCAAGTGGGGCACACGTG...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTCCCTCAAAGGCGTCCTaGAAGTGCTCAGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFPSKAS*KCSECP
Trigger: GGGACACTCTGAGCACTTTCAGGACGCCTTTGAGGG...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR TCA 90 bp AACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAACAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: NVWSANVTATASLLRTSEQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...TTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGCAGGTAAACACCCATaGAGTAGAAAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSAGKHP*SRKGLQ
Trigger: CTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGC...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACATTGCATCCTGTAGATaGAGAGACACGCATGCTTCG +
Preference number: 4 (lower is better)
Translates to: VASSCCSGHHRSKETTQNIASCR*RDTHAS
Trigger: CGAAGCATGCGTGTCTCTTCATCTACAGGATGCAAT...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAATTGCATCCTGTAGATaGAGAGACACGCATGCTTCG +
Preference number: 4 (lower is better)
Translates to: GWRRMVRKGDCLTVDQFQIASCR*RDTHAS
Trigger: CGAAGCATGCGTGTCTCTTCATCTACAGGATGCAAT...TTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCATGTTCTCCAAGCCATTaGCAGCTGAGAGAATTCAGG +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPCSPSH*QLREFR
Trigger: CCTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACA...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGGATGACTTGGGCCCATaGGATGTTCTCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: AVMICSVSALCSSRHGWLDDLGP*DVLQAI
Trigger: AATGGCTTGGAGAACATCTCATGGGCCCAAGTCATC...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAACTTGTGCAGCCTGCTaGAGAGCCGGACTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGTCAAC*RAGLRL
Trigger: CAACCTGAGTCCGGCTCTTCAGCAGGCTGCACAAGT...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCGTGGAGAGCCCAGCCTaGGCACCAGAATTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: WSANVTATASLLRTSEMFVESPA*APELVA
Trigger: AGCAACTAATTCTGGTGCTCAGGCTGGGCTCTCCAC...GAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAG +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHRERLPHC*PIPKPK
Trigger: CTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRNPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCAATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGTGATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGAAAATGAAAGGAGGATaGCATGGCTCACTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: GDSSQDIPNKQWPPGLWQKMKGG*HGSLSK
Trigger: CTTGCTTAGTGAGCCATGTCATCCTCCTTTCATTTT...CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAGTCACCATCCAAAAATaGAAGGAGGATGACATGGCT +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELVTIQK*KEDDMA
Trigger: AGCCATGTCATCCTCCTTTCATTTTTGGATGGTGAC...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCTGTCATGGGGGAAGGTaGGTTACACAGGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFCHGGR*VTQGGT
Trigger: GGTACCTCCCTGTGTAACTCACCTTCCCCCATGACA...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACTGGCTGCTGAGCACTTaGAATGTGATTAGCGCAACT +
Preference number: 4 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYWLLST*NVISAT
Trigger: AGTTGCGCTAATCACATTTCAAGTGCTCAGCAGCCA...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCACATAGCTGCCTTAACTaGCTGCCTTGGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSHSCLN*LPWCLF
Trigger: GAATAAACACCAAGGCAGTCAGTTAAGGCAGCTATG...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCTGTGAAATTACTGACTaGCTTCCTTTGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTCEITD*LPLAVG
Trigger: CCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACA...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTGGGCAGAAAGTAGTCTaGGCAGTGGGAGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIGQKVV*AVGDFS
Trigger: ACTAAAATCTCCCACTGCTCAGACTACTTTCTGCCC...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGGGCAGAAAGTAGTCTaGGCAGTGGGAGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTGQKVV*AVGDFS
Trigger: ACTAAAATCTCCCACTGCTCAGACTACTTTCTGCCC...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGCTGACTACAACAGCCTaGGTGAGGAGGAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PMRELMVSVKRGTITRNTLTTTA*VRRKEA
Trigger: TGCCTCTTTCCTCCTCACTCAGGCTGTTGTAGTCAG...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAAAAAACAGACCTTTCTaGGAAGAGAAGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRKNRPF*EEKGLL
Trigger: CAGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAAAAAACAGACCTTTCTaGGAAGAGAAGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPKNRPF*EEKGLL
Trigger: CAGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTGAACGTAAAAACAGACCTTTCTaGGAAGAGAAGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KAHDNDGNERYDLGVSERKNRPF*EEKGLL
Trigger: CAGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTT...ACGTTCACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR GCA 90 bp CATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGCCCTGCTGACATCCTGTTACTAATTCCACTTGTCTaGCTCGGCCACATAAACTCT +
Preference number: 4 (lower is better)
Translates to: HALEGSESRVNCPADILLLIPLV*LGHINS
Trigger: AGAGTTTATGTGGCCGAGGCAGACAAGTGGAATTAG...TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTCAGAGCCCTCAAGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCATCTCCTTCTTCAGCTaGATAGTTTCGGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTISFFS*IVSEDL
Trigger: AAGGTCCTCCGAAACTATGCAGCTGAAGAAGGAGAT...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAATCTCCTTCTTCAGCTaGATAGTTTCGGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: VMSMRFCHMPLRALSPELISFFS*IVSEDL
Trigger: AAGGTCCTCCGAAACTATGCAGCTGAAGAAGGAGAT...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCATGTCAGCAGACATATaGAAGCAGCAGCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLMSADI*KQQPGD
Trigger: GTCTCCTGGCTGCTGCTTGCATATGTCTGCTGACAT...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCGATGAGGTAGATGAGTaGCATGGTGCAATTGAACAG +
Preference number: 4 (lower is better)
Translates to: DGPAEHAKRLVSKCHSHSDEVDE*HGAIEQ
Trigger: CTGTTCAATTGCACCATGGCACTCATCTACCTCATC...GCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGTTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TAVPHTALTERNRLFDDLFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAGGGATTGCTTGGGTCTaGACAGCAGTCCCTCACACT +
Preference number: 4 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEGIAWV*TAVPHT
Trigger: AGTGTGAGGGACTGCTGTGCAGACCCAAGCAATCCC...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp AGTCAGGTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATGCACCAGGTTGGGATTaGTTGGGTCTGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SQVLYLVREKLPIKQPLYAPGWD*LGLHSS
Trigger: ACTGCTGTGCAGACCCAAGCAATCCCAACCTGGTGC...ATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACACCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp ACAGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCAGCACCAGAATTAGTTaGTTCCACTTGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TAMGMVQLNMPNVWSANVSTRIS*FHLCSL
Trigger: CAGGCTGCACAAGTGGAAGCAACTAATTCTGGTGCT...GACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACCCAATGCAGCCGTCCTaGTCATACAGTAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYPMQPS*SYSKIH
Trigger: ATGGATCTTACTGTATGAGCAGGACGGCTGCATTGG...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGTTCACATATGCATTATaGTCTGAACCCAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWFTYAL*SEPRAT
Trigger: AGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAA...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGAGGAATGTCACCCCATaGTTCACATATGCATTATGC +
Preference number: 4 (lower is better)
Translates to: LVMSMRFCHMPLRALSPERNVTP*FTYALC
Trigger: GCATAATGCATATGTGAAGCATGGGGTGACATTCCT...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTCACCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACCAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: VTPCFTYALCSEPRATMTRQVSL*IRHPVV
Trigger: GACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCT...GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATTGGTCAGGATGTAGATGAGCGTCACAATTGGCATAGAAATCCCAATGGCCAAGAGCCCTGGGATGGGTaGCAGCTTAGCTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: IGQDVDERHNWHRNPNGQEPWDG*QLSSDR
Trigger: TCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTC...TTGGCCATTGGGATTTCTATGCCAATTGTGACGCTCATCTACATCCTGACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR GCA 90 bp AAAGGGACTCCAGAAAGGGCAATCCCGATGCCAATGAGGGAATTAATGGTGTCAAGTAAGCTTCTGCTGTaGCATACCACCAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KGTPERAIPMPMRELMVSSKLLL*HTTRLP
Trigger: AGGCAGCCTGGTGGTATGGCACAGCAGAAGCTTACT...TGACACCATTAATTCCCTCATTGGCATCGGGATTGCCCTTTCTGGAGTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTTTAGCAGTAAGCTTCTaGTGTGCCATACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPLAVSF*CAIPPG
Trigger: GCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAA...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTTTAGCAGTAAGCTTCTaGTGTGCCATACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSLAVSF*CAIPPG
Trigger: GCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAA...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGTTAGCAGTAAGCTTCTaGTGTGCCATACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: AVMICSVSALCSSRHGWLLAVSF*CAIPPG
Trigger: GCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAA...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGTCTTCCACCTGGGACTaGCTGGTGTTAGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: TAVPHTALTERNRLFDDLSSTWD*LVLGTR
Trigger: TCTTGTCCCTAACACCAGCCAGTCCCAGGTGGAAGA...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp AGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGGAGCATACATCTTCTTCCACCTaGGACTGGCTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: RELMVSVKRGTITRNTEHTSSST*DWLVLG
Trigger: CCCTAACACCAGCCAGTCCCAGGTGGAAGAAGATGT...ATGCTCCGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTAAAACGCTCAATGTaGATCATGGACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTVKRSM*IMDRRS
Trigger: GGACCTTCTGTCCATGATCCACATTGAGCGTTTTAC...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTAAAACGCTCAATGTaGATCATGGACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHREVKRSM*IMDRRS
Trigger: GGACCTTCTGTCCATGATCCACATTGAGCGTTTTAC...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAGAGGCCGGGGCCGCTTaGGCTCCTTCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGEAGAA*APSSGG
Trigger: ACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTC...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGATATGCAGAACACGATaGGGAAAAACACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRICRTR*GKTRSA
Trigger: AGCTGAGCGTGTTTTTCCCCATCGTGTTCTGCATAT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCTTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSLSVTG*RRMVRK
Trigger: CTTCCTGACCATTCTTCTCCACCCAGTCACAGATAA...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGATTCCTGGGATTAGCTaGTTATCTGGTGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHREIPGIS*LSGGES
Trigger: GCTTTCTCCACCAGATAACCAGCTAATCCCAGGAAT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTCACCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACCCCAAAGAGAGGATCCTaGGAGAAGTCTGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: VTPCFTYALCSEPRATMTPKRGS*EKSVSS
Trigger: GCTGGATACAGACTTCTCCCAGGATCCTCTCTTTGG...GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCCAGACAACAAAGAGCTaGCAGAAATTAATTCCACCA +
Preference number: 4 (lower is better)
Translates to: RKEAAADSGCGASTLWMCQTTKS*QKLIPP
Trigger: TGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGCTCTTATCTACATaGAGTTGTTCAACCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQLLLST*SCSTCR
Trigger: TCGGCAGGTTGAACAACTCCATGTAGATAAGAGCAA...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCTCTTACTCACTGTCATaGGGGAAGGTGAGTTACACA +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTSYSLS*GKVSYT
Trigger: TGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGA...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGTGGCAAGGGCAAATTTCCTaGCACAGTTTAACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GIGVKRSMWIMDRRSGRWQGQIS*HSLTRP
Trigger: GGGCCTTGTTAAACTGTGCCAGGAAATTTGCCCTTG...CCACCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
CDS-3UTR CCA 90 bp AGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGGAGCATCACCTGTGTTTGCTGTaGCCTGTAATCCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: RELMVSVKRGTITRNTEHHLCLL*PVIPTQ
Trigger: CTGAGTGGGGATTACAGGCCACAGCAAACACAGGTG...ATGCTCCGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648130.1
3UTR CAA 72 bp TCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTaGATGACTTGGGCCCATGAGATGTTCTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SLTLPLQRGTGY*MTWAHEMFSKP
Trigger: TGGCTTGGAGAACATCTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR CAA 72 bp AGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGTCGGGCAGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: RSHVLSVQASQP*HKTPCRRAGIC
Trigger: GCAAATTCCTGCCCGACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTGAACGCTAAGAACATGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 72 bp ACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGACAGGGCAACAGCAATG +
Preference number: 4 (lower is better)
Translates to: TKNNLDEAKMDA*RPPKQDRATAM
Trigger: CATTGCTGTTGCCCTGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 72 bp ATCCACCTGAGCCCCGTGGTCCCAGCAAAGCTTACATaGAACAGTAAAGCAGGGATAGGTGTAAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: IHLSPVVPAKLT*NSKAGIGVKRS
Trigger: TGAGCGTTTTACACCTATCCCTGCTTTACTGTTCAATGTAAGCTTTGCTGGGACCACGGGGCTCAGGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567346.5
CDS-3UTR TCA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCCACGTGTGCCCCACTTaGCATAGGCACAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPHVCPT*HRHSSQ
Trigger: TTGTGAACTGTGCCTATGTCAAGTGGGGCACACGTG...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp AAAGGGACTCCAGAAAGGGCAATCCCGATGCCAATGAGGGAATTAATGGTGTCACTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KGTPERAIPMPMRELMVSLSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...TGACACCATTAATTCCCTCATTGGCATCGGGATTGCCCTTTCTGGAGTCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTCAAGCCATTGACAGCTaGGAGAATTCAGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPQAIDS*ENSGDP
Trigger: TGGATCACCTGAATTCTCTCAGCTGTCAATGGCTTG...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAATTCAGAAAAGTGAAATaGCCTAGCACCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GWRRMVRKGDCLTVDQFQFRKVK*PSTRLG
Trigger: TCCCAACCTGGTGCTAGGTCATTTCACTTTTCTGAA...TTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACTTCAGAAAAGTGAAATaGCCTAGCACCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: VASSCCSGHHRSKETTQNFRKVK*PSTRLG
Trigger: TCCCAACCTGGTGCTAGGTCATTTCACTTTTCTGAA...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAGGTTTTCAGAAAAGTaGAATGACCTAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSRFSEK*NDLAPG
Trigger: ACCTGGTGCTAGGTCATTTCACTTTTCTGAAAACCT...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTGTACCAAGCTCTTCCTaGGACTGCAGCCACCACACC +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSVPSSS*DCSHHT
Trigger: GGTGTGGTGGCTGCAGTCTCAGGAAGAGCTTGGTAC...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCCCTCCCAGTCTTCACTaGTCTCCACAGGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFPPSLH*SPQGEN
Trigger: GTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAGG...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GCAGGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAG +
Preference number: 4 (lower is better)
Translates to: AGIGVKRSMWIMDRRSGRRLPHC*PIPKPK
Trigger: CTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCT...CCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: IACECLLLTVMGEGELHRNPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GCAGGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 4 (lower is better)
Translates to: AGIGVKRSMWIMDRRSGRICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...CCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 4 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTGTCACCATCCAAAAATaGAAGGAGGATGACATGGCT +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTVTIQK*KEDDMA
Trigger: AGCCATGTCATCCTCCTTTCATTTTTGGATGGTGAC...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTGTCACCATCCAAAAATaGAAGGAGGATGACATGGCT +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIVTIQK*KEDDMA
Trigger: AGCCATGTCATCCTCCTTTCATTTTTGGATGGTGAC...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTCAACCTGCCGAAGTaGTTAAATTCTGTGTACACA +
Preference number: 4 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEFNLPK*LNSVYT
Trigger: TGTGTACACAGAATTTAATCACTTCGGCAGGTTGAA...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTCACCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACCTACCCTCATAGCCTGTaGGTGTCTCTTACTCACTGT +
Preference number: 4 (lower is better)
Translates to: VTPCFTYALCSEPRATMTYPHSL*VSLTHC
Trigger: ACAGTGAGTAAGAGACACTCACAGGCTATGAGGGTA...GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCATAGCTGCCTTAACTaGCTGCCTTGGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: ESCYQDFAGWPAFQASESHSCLN*LPWCLF
Trigger: GAATAAACACCAAGGCAGTCAGTTAAGGCAGCTATG...GCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTTGTGAAATTACTGACTaGCTTCCTTTGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSCEITD*LPLAVG
Trigger: CCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACA...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCGACCTGGATTCAGACTaGTGGTCTTGTGATGTCCAT +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLADLDSD*WSCDVH
Trigger: ATGGACATCACAAGACCATCAGTCTGAATCCAGGTC...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCCTGACTACAACAGCCTaGGTGAGGAGGAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSLTTTA*VRRKEA
Trigger: TGCCTCTTTCCTCCTCACTCAGGCTGTTGTAGTCAG...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTAAAAACAGACCTTTCTaGGAAGAGAAGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPKNRPF*EEKGLL
Trigger: CAGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTT...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGAAAAACAGACCTTTCTaGGAAGAGAAGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IACECLLLTVMGEGELHRKNRPF*EEKGLL
Trigger: CAGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTT...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACCTAATTCCACTTGTCTaGCTCGGCCACATAAACTCT +
Preference number: 4 (lower is better)
Translates to: VASSCCSGHHRSKETTQNLIPLV*LGHINS
Trigger: AGAGTTTATGTGGCCGAGGCAGACAAGTGGAATTAG...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ACAGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCCTAATTCCACTTGTCTaGCTCGGCCACATAAACTCT +
Preference number: 4 (lower is better)
Translates to: TAMGMVQLNMPNVWSANVLIPLV*LGHINS
Trigger: AGAGTTTATGTGGCCGAGGCAGACAAGTGGAATTAG...GACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000563080.1
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCGATGAGGTAGATGAGTaGCATGGTGCAATTGAACAG +
Preference number: 4 (lower is better)
Translates to: ESCYQDFAGWPAFQASESDEVDE*HGAIEQ
Trigger: CTGTTCAATTGCACCATGGCACTCATCTACCTCATC...GCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAGAAACACGGAGCATATaGAGAACACGATGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPETRSI*RTRWGK
Trigger: TTTTCCCCATCGTGTTCTGCATATGCTCCGTGTTTC...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGTTCCCTCTTCCCCACTaGACTTTACCAAGTAAATAT +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWFPLPH*TLPSKY
Trigger: ATATTTACTTGGTAAAGTGCAGTGGGGAAGAGGGAA...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCATGAAGAGACACGCATaGTTCGTTAGAACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTMKRHA*FVRTGV
Trigger: AACACCAGTTCTAACGAAGCATGCGTGTCTCTTCAT...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GTCACCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACCCCAATGCAGCCGTCCTaGTCATACAGTAAGATCCAT +
Preference number: 4 (lower is better)
Translates to: VTPCFTYALCSEPRATMTPMQPS*SYSKIH
Trigger: ATGGATCTTACTGTATGAGCAGGACGGCTGCATTGG...GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTAGTTGTACAATCCAATaGAGCCGTCCTGCTCATACA +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRISCTIQ*SRPAHT
Trigger: TGTATGAGCAGGACGGCTGCATTGGATTGTACAACT...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTAGTTGTACAATCCAATaGAGCCGTCCTGCTCATACA +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTSCTIQ*SRPAHT
Trigger: TGTATGAGCAGGACGGCTGCATTGGATTGTACAACT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGAGGAATGTCACCCCATaGTTCACATATGCATTATGC +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRRNVTP*FTYALC
Trigger: GCATAATGCATATGTGAAGCATGGGGTGACATTCCT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACATAAGGAATGTCACCCCATaGTTCACATATGCATTATGC +
Preference number: 4 (lower is better)
Translates to: YDLGVSERVLHTCAPLDIRNVTP*FTYALC
Trigger: GCATAATGCATATGTGAAGCATGGGGTGACATTCCT...TATGTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR GCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: TAVPHTALTERNRLFDDLRQVSL*IRHPVV
Trigger: GACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCT...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGACCTTTGCCTACACTTaGTCTTATCTACATGGAGTT +
Preference number: 4 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQTFAYT*SYLHGV
Trigger: AACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGT...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAGCTGCCTTAACTGACTaGCTTGGTGTTTATTCTAGC +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRAALTD*LGVYSS
Trigger: GCTAGAATAAACACCAAGGCAGTCAGTTAAGGCAGC...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTGAGTCCAGAGTTAACTaGCCTGCTGACATCCTGTTA +
Preference number: 4 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPESRVN*PADILL
Trigger: TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTC...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCAAGAGAAGGGGCTCCTaGAGTAGCCTAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTKRRGS*SSLGKS
Trigger: TGATTTTCCTAGGCTACTGCAGGAGCCCCTTCTCTT...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCGGAGGACCTTTGAGGTaGCGAGCTGACATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSGGPLR*RADIFF
Trigger: GAAGAAGATGTCAGCTCGCCACCTCAAAGGTCCTCC...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTGATGAGCGTCACAATTaGCATAGAAATCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIDERHN*HRNPNG
Trigger: GCCATTGGGATTTCTATGCCAATTGTGACGCTCATC...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATAAGAAGGTCCGGTAGGTaGCCCTCCCGGGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLIRRSGR*PSREPT
Trigger: CGTGGGCTCCCGGGAGGGCCACCTACCGGACCTTCT...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAGTAAAACGCTCAATGTaGATCATGGACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRVKRSM*IMDRRS
Trigger: GGACCTTCTGTCCATGATCCACATTGAGCGTTTTAC...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCAATATGCAGAACACGATaGGGAAAAACACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPICRTR*GKTRSA
Trigger: AGCTGAGCGTGTTTTTCCCCATCGTGTTCTGCATAT...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTTGGCCTCCGGGACTCTaGCAGGTAAACACCCATGAA +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFWPPGL*QVNTHE
Trigger: TTCATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCA...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGTTATCAGGATTTTGCTaGTTGGCCTGCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TAVPHTALTERNRLFDDLLSGFC*LACLPG
Trigger: GCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAA...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTLIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCGGTTATTTGATGACTTaGGCCCATGAGATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTGYLMT*AHEMFS
Trigger: GGAGAACATCTCATGGGCCCAAGTCATCAAATAACC...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGTGATAGCAGCCAGGACATTCCGAATAAACAATGGCCTCCGGGACTCTGGCAGCAGACAACAAAGAGCTaGCAGAAATTAATTCCACCA +
Preference number: 4 (lower is better)
Translates to: GDSSQDIPNKQWPPGLWQQTTKS*QKLIPP
Trigger: TGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG...CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAATTGCTCTTATCTACATaGAGTTGTTCAACCTGCCGA +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKLLLST*SCSTCR
Trigger: TCGGCAGGTTGAACAACTCCATGTAGATAAGAGCAA...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ACAGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCTCTTACTCACTGTCATaGGGGAAGGTGAGTTACACA +
Preference number: 4 (lower is better)
Translates to: TAMGMVQLNMPNVWSANVSYSLS*GKVSYT
Trigger: TGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGA...GACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAAGACTTCCTTTGGCAGTaGGGCCAAGAAACAATATAT +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKDFLWQ*GQETIY
Trigger: ATATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTC...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCGACTTCCTTTGGCAGTaGGGCCAAGAAACAATATAT +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSDFLWQ*GQETIY
Trigger: ATATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTC...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCGACTTCCTTTGGCAGTaGGGCCAAGAAACAATATAT +
Preference number: 4 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTDFLWQ*GQETIY
Trigger: ATATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTC...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGTGTAGCAATACAGACTaGATAGTAATGGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWCSNTD*IVMAIR
Trigger: CCTAATGGCCATTACTATCCAGTCTGTATTGCTACA...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCTTGGGTCTGCACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATGTAGCAATACAGACTaGATAGTAATGGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: AWVCTAVPHTALTERNRLCSNTD*IVMAIR
Trigger: CCTAATGGCCATTACTATCCAGTCTGTATTGCTACA...TAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGTGCAGACCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCACAGCCCCCACGACCTaGATTCAGACTGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFTAPTT*IQTDGL
Trigger: AAGACCATCAGTCTGAATCCAGGTCGTGGGGGCTGT...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AGTCAGGTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGCAGACAGCGGATGTaGAGCAAGTACCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SQVLYLVREKLPIKQPLYSRQRM*SKYPLD
Trigger: ATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCT...ATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACACCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp TACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACATACACAAGACCTCTTCATaGCCAAAAGAAACTCATCAG +
Preference number: 4 (lower is better)
Translates to: YDLGVSERVLHTCAPLDIHKTSS*PKETHQ
Trigger: CTGATGAGTTTCTTTTGGCCATGAAGAGGTCTTGTG...TATGTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR TCA 90 bp GCAGGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGACTGCTAAGGACATCTaGAATGTTCAGCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: AGIGVKRSMWIMDRRSGRTAKDI*NVQHCV
Trigger: TACACAGTGCTGAACATTTCAGATGTCCTTAGCAGT...CCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCAACTGCTAAGGACATCTaGAATGTTCAGCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPTAKDI*NVQHCV
Trigger: TACACAGTGCTGAACATTTCAGATGTCCTTAGCAGT...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACAGTGAGCACTGGCCCTaGGCCCCACTATATGATTGG +
Preference number: 4 (lower is better)
Translates to: ELSAVMICSVSALCSSRHSEHWP*APLYDW
Trigger: CCAATCATATAGTGGGGCTCAGGGCCAGTGCTCACT...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGAGTACACTGTCCCGGTaGCCCACACCAAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLSTLSR*PTPRWL
Trigger: GAGCCACCTTGGTGTGGGTCACCGGGACAGTGTACT...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCATATGCATTATGCTCTaGACCCAGGGCAACTATGAC +
Preference number: 4 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTICIML*TQGNYD
Trigger: GTCATAGTTGCCCTGGGTTCAGAGCATAATGCATAT...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAAAAATGAAAGGAGGATaGCATGGCTCACTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPKMKGG*HGSLSK
Trigger: CTTGCTTAGTGAGCCATGTCATCCTCCTTTCATTTT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: QLNMPNVWSANVTATASLKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...CAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATTTCAACCTGCCGAAGTaGTTAAATTCTGTGTACACA +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYFNLPK*LNSVYT
Trigger: TGTGTACACAGAATTTAATCACTTCGGCAGGTTGAA...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAATTCAACCTGCCGAAGTaGTTAAATTCTGTGTACACA +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKFNLPK*LNSVYT
Trigger: TGTGTACACAGAATTTAATCACTTCGGCAGGTTGAA...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGGAGCATTGGCTGCTGAGCACTTaGAATGTGATTAGCGCAACT +
Preference number: 4 (lower is better)
Translates to: RELMVSVKRGTITRNTEHWLLST*NVISAT
Trigger: AGTTGCGCTAATCACATTTCAAGTGCTCAGCAGCCA...ATGCTCCGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGTGTGAAATTACTGACTaGCTTCCTTTGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PMRELMVSVKRGTITRNTCEITD*LPLAVG
Trigger: CCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACA...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTATTCAGGTTCTGTGCTaGAACCACAAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LHYNREQKQTFLRREGAPIQVLC*NHKGGG
Trigger: TCCCCCTCCCTTGTGGTTTCAGCACAGAACCTGAAT...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTTGCCTCAATCAAAAGTaGCCCTACAGTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: VIRILLVGLPSRPQKATSCLNQK*PYSLKE
Trigger: TTCTTTCAAACTGTAGGGTCACTTTTGATTGAGGCA...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACACCATCCCACCACAGTaGAAACTTATGTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDTIPPQ*KLMLGE
Trigger: CTCCCCTAACATAAGTTTTCACTGTGGTGGGATGGT...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGGAAGGAGTTCGGCTATaGCAGCCCCCACGACCTGGA +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLEGVRL*QPPRPG
Trigger: TCCAGGTCGTGGGGGCTGTCATAGCCGAACTCCTTC...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTGAAATCTCCTTCTTCAGCTaGATAGTTTCGGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: NKAHDNDGNERYDLGVSEISFFS*IVSEDL
Trigger: AAGGTCCTCCGAAACTATGCAGCTGAAGAAGGAGAT...TTCACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR GCA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCATGTCAGCAGACATATaGAAGCAGCAGCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPMSADI*KQQPGD
Trigger: GTCTCCTGGCTGCTGCTTGCATATGTCTGCTGACAT...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSLLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPLLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGTTCCCTCTTCCCCACTaGACTTTACCAAGTAAATAT +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHREFPLPH*TLPSKY
Trigger: ATATTTACTTGGTAAAGTGCAGTGGGGAAGAGGGAA...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTATGAAGAGACACGCATaGTTCGTTAGAACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTMKRHA*FVRTGV
Trigger: AACACCAGTTCTAACGAAGCATGCGTGTCTCTTCAT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GCAGGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGTTCACATATGCATTATaGTCTGAACCCAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: AGIGVKRSMWIMDRRSGRFTYAL*SEPRAT
Trigger: AGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAA...CCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATCGTCGGGCAGGAATTTaGCGTTACAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHRRAGI*RYKSQT
Trigger: GGTTTGGGATTTGTAACGGCAAATTCCTGCCCGACG...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATAGGCAAGTCAGCCTTTaGATAAGACACCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHRQVSL*IRHPVV
Trigger: GACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCT...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AGTCAGGTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SQVLYLVREKLPIKQPLYTMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...ATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACACCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp AATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCACTGTGACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NVTATASLLRTSEMFSTVTMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...CACAGTGCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATTGTGCTGTTACAATGTaGTCCCTGCTATTTATACTC +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYCAVTM*SLLFIL
Trigger: GAGTATAAATAGCAGGGAGCACATTGTAACAGCACA...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCACCTTTGCCTACACTTaGTCTTATCTACATGGAGTT +
Preference number: 4 (lower is better)
Translates to: LGGEEWSGRETASLLTNSTFAYT*SYLHGV
Trigger: AACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGT...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACCTTTGCCTACACTTaGTCTTATCTACATGGAGTT +
Preference number: 4 (lower is better)
Translates to: MGMVQLNMPNVWSANVTATFAYT*SYLHGV
Trigger: AACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGT...GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCAGTACCCTCTGGATGTaGAGAAGGAGTTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSSTLWM*RRSSAM
Trigger: CATAGCCGAACTCCTTCTGCACATCCAGAGGGTACT...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCAATCAGAAGGAGCAATaGACAGATCCACCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSNQKEQ*TDPPEP
Trigger: GGGCTCAGGTGGATCTGTGCATTGCTCCTTCTGATT...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567346.5
CDS-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCATAAACTCTCCCAGTaGCCCGGCGCCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEHKLSQ*PGAARM
Trigger: CATCCTGGCGGCGCCGGGCCACTGGGAGAGTTTATG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCAGAAGAGCCCACCAATaGCCCACACAATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFRRAHQ*PTQSVT
Trigger: TGTCACTGATTGTGTGGGCCATTGGTGGGCTCTTCT...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCAGAAGAGCCCACCAATaGCCCACACAATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSRRAHQ*PTQSVT
Trigger: TGTCACTGATTGTGTGGGCCATTGGTGGGCTCTTCT...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000566579.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATAGAAGAGCCCACCAATaGCCCACACAATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHRRAHQ*PTQSVT
Trigger: TGTCACTGATTGTGTGGGCCATTGGTGGGCTCTTCT...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGATGCTCAGAGTGTCCCTaGCACAGTTTAACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGCSECP*HSLTRP
Trigger: GGGCCTTGTTAAACTGTGCCAGGGACACTCTGAGCA...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCGCTCAATGTGGATCATaGACAGAAGGTCCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: WSANVTATASLLRTSEMFAQCGS*TEGPVG
Trigger: ACCTACCGGACCTTCTGTCCATGATCCACATTGAGC...GAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCCATGGTGCAATTGAACAGTAAAGCAGGGATAGGTGTAAAACGCTCAATGTGGATTCCGAATAAACAATaGCCTCCGGGACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AMVQLNSKAGIGVKRSMWIPNKQ*PPGLWQ
Trigger: CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAAT...CCACATTGAGCGTTTTACACCTATCCCTGCTTTACTGTTCAATTGCACCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTCAGGTTGGGATTGCTTaGGTCTGCACAGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSQVGIA*VCTAVP
Trigger: AGGGACTGCTGTGCAGACCCAAGCAATCCCAACCTG...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTGACCTAGCACCAGGTTaGGATTGCTTGGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSDLAPG*DCLGLH
Trigger: GTGCAGACCCAAGCAATCCCAACCTGGTGCTAGGTC...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 4 (lower is better)
Translates to: PMRELMVSVKRGTITRNTSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTATTCCTGGGATTAGCTaGTTATCTGGTGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSIPGIS*LSGGES
Trigger: GCTTTCTCCACCAGATAACCAGCTAATCCCAGGAAT...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCATTCCTGGGATTAGCTaGTTATCTGGTGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLAIPGIS*LSGGES
Trigger: GCTTTCTCCACCAGATAACCAGCTAATCCCAGGAAT...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCCCAAAGAGAGGATCCTaGGAGAAGTCTGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: WSANVTATASLLRTSEMFPKRGS*EKSVSS
Trigger: GCTGGATACAGACTTCTCCCAGGATCCTCTCTTTGG...GAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATCAGACAACAAAGAGCTaGCAGAAATTAATTCCACCA +
Preference number: 4 (lower is better)
Translates to: VGILWLRSQREDPGRSLYQTTKS*QKLIPP
Trigger: TGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCATTGCTCTTATCTACATaGAGTTGTTCAACCTGCCGA +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPLLLST*SCSTCR
Trigger: TCGGCAGGTTGAACAACTCCATGTAGATAAGAGCAA...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAATGTAGCAATACAGACTaGATAGTAATGGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKCSNTD*IVMAIR
Trigger: CCTAATGGCCATTACTATCCAGTCTGTATTGCTACA...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAACAAGGGCAAATTTCCTaGCACAGTTTAACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: NVWSANVTATASLLRTSEQGQIS*HSLTRP
Trigger: GGGCCTTGTTAAACTGTGCCAGGAAATTTGCCCTTG...TTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
CDS-3UTR CCA 90 bp TTTAACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTAACATGCCAAACGTCTaGTCAGCAAATGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: FNKAHDNDGNERYDLGVSNMPNV*SANVLA
Trigger: TGCCAGGACATTTGCTGACCAGACGTTTGGCATGTT...ACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563080.1
CDS-3UTR TCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCCGACCTTGGCGTAAGTaGACGTGTCCTGCACACGTG +
Preference number: 4 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTRPWRK*TCPAHV
Trigger: CACGTGTGCAGGACACGTTCACTTACGCCAAGGTCG...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCTCAGAAAGCCACCTCTaGCCTCTAGTCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSSESHL*PLVSFP
Trigger: AGGAAAACTGACTAGAGGTCAGAGGTGGCTTTCTGA...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCTACCACAGACATTTCTaGGCCCAAAGGGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPYHRHF*AQRDSV
Trigger: AACTGAGTCCCTTTGGGCTCAGAAATGTCTGTGGTA...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTCAAGTGCTTGTAACGTaGTCTATGATCTATCTGTAT +
Preference number: 4 (lower is better)
Translates to: VIRILLVGLPSRPQKATSQVLVT*SMIYLY
Trigger: ATACAGATAGATCATAGATCACGTTACAAGCACTTG...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp AATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCACTGTGCAAGCCATTGACAGCTaGGAGAATTCAGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: NVTATASLLRTSEMFSTVQAIDS*ENSGDP
Trigger: TGGATCACCTGAATTCTCTCAGCTGTCAATGGCTTG...CACAGTGCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618043.4
CDS-3UTR TCA 90 bp CTTAACATGTGGAAGGAAAAGCATATCAAGCATATCGGGCGGCACCATCCCACCAGGTTTTCAGAAAAGTaGAATGACCTAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LNMWKEKHIKHIGRHHPTRFSEK*NDLAPG
Trigger: ACCTGGTGCTAGGTCATTTCACTTTTCTGAAAACCT...GGTGGGATGGTGCCGCCCGATATGCTTGATATGCTTTTCCTTCCACATGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp AAAGGGACTCCAGAAAGGGCAATCCCGATGCCAATGAGGGAATTAATGGTGTCAGAAGAGGATGCAGCCTaGTGTGAGGTTTTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: KGTPERAIPMPMRELMVSEEDAA*CEVFRK
Trigger: TTTTCTGAAAACCTCACATCAGGCTGCATCCTCTTC...TGACACCATTAATTCCCTCATTGGCATCGGGATTGCCCTTTCTGGAGTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618043.4
CDS-3UTR TCA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAG +
Preference number: 4 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDRLPHC*PIPKPK
Trigger: CTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCT...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHNPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAAACCCAGGGCAACTATaGCCATGCTTCCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: LITVVKLLTDFLWQWGQENPGQL*PCFLQS
Trigger: AGATTGAAGGAAGCATGGTCATAGTTGCCCTGGGTT...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACGTCACCATCCAAAAATaGAAGGAGGATGACATGGCT +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNVTIQK*KEDDMA
Trigger: AGCCATGTCATCCTCCTTTCATTTTTGGATGGTGAC...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGTCAGGTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATTACCCTCATAGCCTGTaGGTGTCTCTTACTCACTGT +
Preference number: 4 (lower is better)
Translates to: SQVLYLVREKLPIKQPLYYPHSL*VSLTHC
Trigger: ACAGTGAGTAAGAGACACTCACAGGCTATGAGGGTA...ATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACACCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAATGTGAAATTACTGACTaGCTTCCTTTGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LITVVKLLTDFLWQWGQECEITD*LPLAVG
Trigger: CCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACA...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCACCATCCCACCACAGTaGAAACTTATGTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPTIPPQ*KLMLGE
Trigger: CTCCCCTAACATAAGTTTTCACTGTGGTGGGATGGT...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp AACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAGAAACACGGAGCATATaGAGAACACGATGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: NVWSANVTATASLLRTSEETRSI*RTRWGK
Trigger: TTTTCCCCATCGTGTTCTGCATATGCTCCGTGTTTC...TTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACTTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ELSAVMICSVSALCSSRHFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAATATCTGTAAGAGCTaGATCTACCTATCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: ACECLLLTVMGEGELHRENICKS*IYLSGV
Trigger: TACTCCTGATAGGTAGATGCAGCTCTTACAGATATT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGAATATCTGTAAGAGCTaGATCTACCTATCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRNICKS*IYLSGV
Trigger: TACTCCTGATAGGTAGATGCAGCTCTTACAGATATT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCTTCACATATGCATTATaGTCTGAACCCAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLFTYAL*SEPRAT
Trigger: AGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAA...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGAGGAATGTCACCCCATaGTTCACATATGCATTATGC +
Preference number: 4 (lower is better)
Translates to: AVMICSVSALCSSRHGWLRNVTP*FTYALC
Trigger: GCATAATGCATATGTGAAGCATGGGGTGACATTCCT...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCTGTGCTGTTACAATGTaGTCCCTGCTATTTATACTC +
Preference number: 4 (lower is better)
Translates to: ESCYQDFAGWPAFQASESCAVTM*SLLFIL
Trigger: GAGTATAAATAGCAGGGAGCACATTGTAACAGCACA...GCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTTGTGCTGTTACAATGTaGTCCCTGCTATTTATACTC +
Preference number: 4 (lower is better)
Translates to: WGKVSYTGRYLLAASFRICAVTM*SLLFIL
Trigger: GAGTATAAATAGCAGGGAGCACATTGTAACAGCACA...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGATGTGCTGTTACAATGTaGTCCCTGCTATTTATACTC +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRCAVTM*SLLFIL
Trigger: GAGTATAAATAGCAGGGAGCACATTGTAACAGCACA...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTTGTGCTGTTACAATGTaGTCCCTGCTATTTATACTC +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTCAVTM*SLLFIL
Trigger: GAGTATAAATAGCAGGGAGCACATTGTAACAGCACA...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTCATTTTCTAAACCTTTaGCTACACTTGCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSHFLNL*LHLLLS
Trigger: AGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCCTCCTTCATCCTACCTaGCATCATTCTTTGACTTTA +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTLLHPT*HHSLTL
Trigger: TAAAGTCAAAGAATGATGGCAGGTAGGATGAAGGAG...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGGCTGCCTTAACTGACTaGCTTGGTGTTTATTCTAGC +
Preference number: 4 (lower is better)
Translates to: TAVPHTALTERNRLFDDLAALTD*LGVYSS
Trigger: GCTAGAATAAACACCAAGGCAGTCAGTTAAGGCAGC...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTTTAGCAGTAAGCTTCTaGTGTGCCATACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFLAVSF*CAIPPG
Trigger: GCCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAA...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCGAGTCCAGAGTTAACTaGCCTGCTGACATCCTGTTA +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSESRVN*PADILL
Trigger: TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTC...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTAGTACCCTCTGGATGTaGAGAAGGAGTTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFSTLWM*RRSSAM
Trigger: CATAGCCGAACTCCTTCTGCACATCCAGAGGGTACT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGATTGAGCAAGGATTTTaGATTACAATCGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWIEQGF*ITIGNK
Trigger: TTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAAT...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTTCTTCCACCTGGGACTaGCTGGTGTTAGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSSSTWD*LVLGTR
Trigger: TCTTGTCCCTAACACCAGCCAGTCCCAGGTGGAAGA...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATTGGTCAGGATGTAGATGAGCGTCACAATTGGCATAGAAATCCCAATGGCCAAAGAAGAGCCCACCAATaGCCCACACAATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: IGQDVDERHNWHRNPNGQRRAHQ*PTQSVT
Trigger: TGTCACTGATTGTGTGGGCCATTGGTGGGCTCTTCT...TTGGCCATTGGGATTTCTATGCCAATTGTGACGCTCATCTACATCCTGACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566579.5
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTCAAAAGCAAAGCTGCTaGGTGCCTCTGGTGATAGCA +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFQKQSC*VPLVIA
Trigger: TGCTATCACCAGAGGCACCCAGCAGCTTTGCTTTTG...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLALIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: AVMICSVSALCSSRHGWLLIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: IACECLLLTVMGEGELHRLIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACGTCAGGTGTTGTACCTaGTCAGAGAAAAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDVRCCT*SEKNFP
Trigger: TGGGAAGTTTTTCTCTGACCAGGTACAACACCTGAC...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGGTCAGGTGTTGTACCTaGTCAGAGAAAAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: TAVPHTALTERNRLFDDLVRCCT*SEKNFP
Trigger: TGGGAAGTTTTTCTCTGACCAGGTACAACACCTGAC...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp AAAGGGACTCCAGAAAGGGCAATCCCGATGCCAATGAGGGAATTAATGGTGTCAGGTTATTTGATGACTTaGGCCCATGAGATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KGTPERAIPMPMRELMVSGYLMT*AHEMFS
Trigger: GGAGAACATCTCATGGGCCCAAGTCATCAAATAACC...TGACACCATTAATTCCCTCATTGGCATCGGGATTGCCCTTTCTGGAGTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618043.4
CDS-3UTR CCA 90 bp AATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCACTGTGCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: NVTATASLLRTSEMFSTVQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...CACAGTGCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: WSANVTATASLLRTSEMFQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...GAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACTTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNLSVTG*RRMVRK
Trigger: CTTCCTGACCATTCTTCTCCACCCAGTCACAGATAA...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCTCCCTTATCTGTGACTaGGTGGAGAAGAATGGTCAG +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFSLICD*VEKNGQ
Trigger: CTGACCATTCTTCTCCACCCAGTCACAGATAAGGGA...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAACAGACAACAAAGAGCTaGCAGAAATTAATTCCACCA +
Preference number: 4 (lower is better)
Translates to: GWRRMVRKGDCLTVDQFQQTTKS*QKLIPP
Trigger: TGGTGGAATTAATTTCTGCCAGCTCTTTGTTGTCTG...TTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCTTGCTCTTATCTACATaGAGTTGTTCAACCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLLLLST*SCSTCR
Trigger: TCGGCAGGTTGAACAACTCCATGTAGATAAGAGCAA...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCATGTAGCAATACAGACTaGATAGTAATGGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPCSNTD*IVMAIR
Trigger: CCTAATGGCCATTACTATCCAGTCTGTATTGCTACA...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTGGAGCAAGTACCCTCTaGATGTGCAGAAGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSGASTL*MCRRSS
Trigger: CGAACTCCTTCTGCACATCCAGAGGGTACTTGCTCC...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCCTGGCAAAATTTGAATGCAGATaGCAGGTTACATATGCAAGC +
Preference number: 4 (lower is better)
Translates to: MGMVQLNMPNVWSANVLAKFECR*QVTYAS
Trigger: GCTTGCATATGTAACCTGCCATCTGCATTCAAATTT...TGCCAGGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563080.1
CDS-3UTR CCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTCACAAGACCTCTTCATaGCCAAAAGAAACTCATCAG +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSHKTSS*PKETHQ
Trigger: CTGATGAGTTTCTTTTGGCCATGAAGAGGTCTTGTG...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTTTGAGGTGGCGAGCTaGCATCTTCTTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLFEVAS*HLLPPG
Trigger: CCCAGGTGGAAGAAGATGTCAGCTCGCCACCTCAAA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACACTGCTAAGGACATCTaGAATGTTCAGCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNTAKDI*NVQHCV
Trigger: TACACAGTGCTGAACATTTCAGATGTCCTTAGCAGT...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGACTGCTAAGGACATCTaGAATGTTCAGCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: PMRELMVSVKRGTITRNTTAKDI*NVQHCV
Trigger: TACACAGTGCTGAACATTTCAGATGTCCTTAGCAGT...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTTGTTCTCCAAGCCATTaGCAGCTGAGAGAATTCAGG +
Preference number: 4 (lower is better)
Translates to: LHYNREQKQTFLRREGAPCSPSH*QLREFR
Trigger: CCTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACA...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp AGTCAGGTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATGGATGCAGCCTGATGTaGGGTTTTCAGAAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: SQVLYLVREKLPIKQPLYGCSLM*GFQKSE
Trigger: TTCACTTTTCTGAAAACCTCACATCAGGCTGCATCC...ATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACACCTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGATCCTTCAATCTTTATTaGGCAAATATATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRSFNLY*ANIWPR
Trigger: CCTTGGCCATATATTTGCTCAATAAAGATTGAAGGA...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAACTATAGAAACAAAGGATTaGAAGCCATTCTCATACAGC +
Preference number: 4 (lower is better)
Translates to: MSMRFCHMPLRALSPELTIETKD*KPFSYS
Trigger: GCTGTATGAGAATGGCTTTCAATCCTTTGTTTCTAT...AGTTAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAATAGAAACAAAGGATTaGAAGCCATTCTCATACAGC +
Preference number: 4 (lower is better)
Translates to: GWRRMVRKGDCLTVDQFQIETKD*KPFSYS
Trigger: GCTGTATGAGAATGGCTTTCAATCCTTTGTTTCTAT...TTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCATAGAAACAAAGGATTaGAAGCCATTCTCATACAGC +
Preference number: 4 (lower is better)
Translates to: ESCYQDFAGWPAFQASESIETKD*KPFSYS
Trigger: GCTGTATGAGAATGGCTTTCAATCCTTTGTTTCTAT...GCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGACCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTA +
Preference number: 4 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRPAIIL*LYVHFL
Trigger: TAGAAAATGGACATAAAGTCAAAGAATGATGGCAGG...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGATGGCTGCTGAGCACTTaGAATGTGATTAGCGCAACT +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGWLLST*NVISAT
Trigger: AGTTGCGCTAATCACATTTCAAGTGCTCAGCAGCCA...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAACTTAGCTTTCCACTaGGTAATGTTTACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTNLAFH*VMFTLH
Trigger: GTGAAGAGTAAACATTACTCAGTGGAAAGCTAAGTT...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTGGTCAGGATGTAGATGAGCGTCACAATTGGCATAGAAATCCCAATGGCCAAACCATCCCACCACAGTaGAAACTTATGTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: IGQDVDERHNWHRNPNGQTIPPQ*KLMLGE
Trigger: CTCCCCTAACATAAGTTTTCACTGTGGTGGGATGGT...TTGGCCATTGGGATTTCTATGCCAATTGTGACGCTCATCTACATCCTGACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR GCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTCTGCACACCTGTGTTTaGTGTGGCCTGTCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFLHTCV*CGLSRN
Trigger: ATTTCTTGACAGGCCACAGCAAACACAGGTGTGCAG...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000618043.4
CDS-3UTR GCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATATCTCCTTCTTCAGCTaGATAGTTTCGGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHISFFS*IVSEDL
Trigger: AAGGTCCTCCGAAACTATGCAGCTGAAGAAGGAGAT...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATGATGAGGTAGATGAGTaGCATGGTGCAATTGAACAG +
Preference number: 4 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHDEVDE*HGAIEQ
Trigger: CTGTTCAATTGCACCATGGCACTCATCTACCTCATC...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCTTGTTATCAGGATTTTaGTGGTTGGCCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFLLSGF*WLACLP
Trigger: TGGAAGGCAGGCCAACCAGCAAAATCCTGATAACAA...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTAGCACCAGAATTAGTTaGTTCCACTTGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFSTRIS*FHLCSL
Trigger: CAGGCTGCACAAGTGGAAGCAACTAATTCTGGTGCT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCACTGTGAGTTGTACAATCCAATaGAGCCGTCCTGCTCATACA +
Preference number: 4 (lower is better)
Translates to: NVTATASLLRTSEMFSTVSCTIQ*SRPAHT
Trigger: TGTATGAGCAGGACGGCTGCATTGGATTGTACAACT...CACAGTGCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTCGTCGGGCAGGAATTTaGCGTTACAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSRRAGI*RYKSQT
Trigger: GGTTTGGGATTTGTAACGGCAAATTCCTGCCCGACG...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTACCTTTGCCTACACTTaGTCTTATCTACATGGAGTT +
Preference number: 4 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPTFAYT*SYLHGV
Trigger: AACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGT...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTCTCCTTCATCCTACCTaGCATCATTCTTTGACTTTA +
Preference number: 4 (lower is better)
Translates to: PNVWSANVTATASLLRTSLLHPT*HHSLTL
Trigger: TAAAGTCAAAGAATGATGGCAGGTAGGATGAAGGAG...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCATCCAGTAGAACTATCTaGAGTGATGATATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPSSRTI*SDDMFC
Trigger: ACAGAACATATCATCACTGCAGATAGTTCTACTGGA...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGTCCAGTAGAACTATCTaGAGTGATGATATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QLNMPNVWSANVTATASLSSRTI*SDDMFC
Trigger: ACAGAACATATCATCACTGCAGATAGTTCTACTGGA...CAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAGCTGCCTTAACTGACTaGCTTGGTGTTTATTCTAGC +
Preference number: 4 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEAALTD*LGVYSS
Trigger: GCTAGAATAAACACCAAGGCAGTCAGTTAAGGCAGC...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCAAGGGCAAATTTATATaGAAGCAGCAGCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SANVTATASLLRTSEMFSKGKFI*KQQPGD
Trigger: GTCTCCTGGCTGCTGCTTGCATATAAATTTGCCCTT...GCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566579.5
CDS-3UTR CCA 90 bp TGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCGATGAGCGTCACAATTaGCATAGAAATCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: WSANVTATASLLRTSEMFDERHN*HRNPNG
Trigger: GCCATTGGGATTTCTATGCCAATTGTGACGCTCATC...GAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379152.7
ENST00000566579.5
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAGATGAGCGTCACAATTaGCATAGAAATCCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEDERHN*HRNPNG
Trigger: GCCATTGGGATTTCTATGCCAATTGTGACGCTCATC...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCAGCACTGTGGTAAAACGCTCAATGTaGATCATGGACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: NVTATASLLRTSEMFSTVVKRSM*IMDRRS
Trigger: GGACCTTCTGTCCATGATCCACATTGAGCGTTTTAC...CACAGTGCTGAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCGACCTAGCACCAGGTTaGGATTGCTTGGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTDLAPG*DCLGLH
Trigger: GTGCAGACCCAAGCAATCCCAACCTGGTGCTAGGTC...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACCCAAAGAGAGGATCCTaGGAGAAGTCTGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: ELSAVMICSVSALCSSRHPKRGS*EKSVSS
Trigger: GCTGGATACAGACTTCTCCCAGGATCCTCTCTTTGG...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAATCTTACTCACTGTCATaGGGGAAGGTGAGTTACACA +
Preference number: 4 (lower is better)
Translates to: LITVVKLLTDFLWQWGQESYSLS*GKVSYT
Trigger: TGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGA...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCAAAATTTGAATGCAGATaGCAGGTTACATATGCAAGC +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPKFECR*QVTYAS
Trigger: GCTTGCATATGTAACCTGCCATCTGCATTCAAATTT...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR TCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGTTTGAGGTGGCGAGCTaGCATCTTCTTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRFEVAS*HLLPPG
Trigger: CCCAGGTGGAAGAAGATGTCAGCTCGCCACCTCAAA...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGCACGTGTGCCCCACTTaGCATAGGCACAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLHVCPT*HRHSSQ
Trigger: TTGTGAACTGTGCCTATGTCAAGTGGGGCACACGTG...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAGAAGAGGATGCAGCCTaGTGTGAGGTTTTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGEEDAA*CEVFRK
Trigger: TTTTCTGAAAACCTCACATCAGGCTGCATCCTCTTC...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ATTCAGGAGAGTTGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTGGTTGGCCTCCTTCAATCTTTATTaGGCAAATATATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: IQESWAHRVLLSGFCWLASFNLY*ANIWPR
Trigger: CCTTGGCCATATATTTGCTCAATAAAGATTGAAGGA...GGCCAACCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACTTCAACCTGCCGAAGTaGTTAAATTCTGTGTACACA +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNFNLPK*LNSVYT
Trigger: TGTGTACACAGAATTTAATCACTTCGGCAGGTTGAA...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGCCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTA +
Preference number: 4 (lower is better)
Translates to: AVMICSVSALCSSRHGWLPAIIL*LYVHFL
Trigger: TAGAAAATGGACATAAAGTCAAAGAATGATGGCAGG...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGGAGCATTGCCTCAATCAAAAGTaGCCCTACAGTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RELMVSVKRGTITRNTEHCLNQK*PYSLKE
Trigger: TTCTTTCAAACTGTAGGGTCACTTTTGATTGAGGCA...ATGCTCCGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACTGCCTCAATCAAAAGTaGCCCTACAGTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNCLNQK*PYSLKE
Trigger: TTCTTTCAAACTGTAGGGTCACTTTTGATTGAGGCA...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGACCTGGATTCAGACTaGTGGTCTTGTGATGTCCAT +
Preference number: 4 (lower is better)
Translates to: ELSAVMICSVSALCSSRHDLDSD*WSCDVH
Trigger: ATGGACATCACAAGACCATCAGTCTGAATCCAGGTC...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGACTAATTCCACTTGTCTaGCTCGGCCACATAAACTCT +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGLIPLV*LGHINS
Trigger: AGAGTTTATGTGGCCGAGGCAGACAAGTGGAATTAG...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATGCACCAGGTTGGGATTaGTTGGGTCTGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYAPGWD*LGLHSS
Trigger: ACTGCTGTGCAGACCCAAGCAATCCCAACCTGGTGC...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTGAGCCCTGGGATGGGTaGCAGCTTAGCTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: SSQHPPQKQTTINRINFIEPWDG*QLSSDR
Trigger: TCTGTCTGAGCTAAGCTGGCACCCATCCCAGGGCTC...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGTCCAGTAGAACTATCTaGAGTGATGATATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AVMICSVSALCSSRHGWLSSRTI*SDDMFC
Trigger: ACAGAACATATCATCACTGCAGATAGTTCTACTGGA...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAGCTGCCTTAACTGACTaGCTTGGTGTTTATTCTAGC +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGAALTD*LGVYSS
Trigger: GCTAGAATAAACACCAAGGCAGTCAGTTAAGGCAGC...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAAGAGAAGGGGCTCCTaGAGTAGCCTAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSKRRGS*SSLGKS
Trigger: TGATTTTCCTAGGCTACTGCAGGAGCCCCTTCTCTT...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCAATTGAGCAAGGATTTTaGATTACAATCGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPIEQGF*ITIGNK
Trigger: TTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAAT...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCAATTGAGCAAGGATTTTaGATTACAATCGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: REGEVPISLAVSFCCAIPIEQGF*ITIGNK
Trigger: TTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAAT...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACATTGAGCAAGGATTTTaGATTACAATCGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: VASSCCSGHHRSKETTQNIEQGF*ITIGNK
Trigger: TTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAAT...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGACATCTTCTTCCACCTaGGACTGGCTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLTSSST*DWLVLG
Trigger: CCCTAACACCAGCCAGTCCCAGGTGGAAGAAGATGT...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCGGAGGACCTTTGAGGTaGCGAGCTGACATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTGGPLR*RADIFF
Trigger: GAAGAAGATGTCAGCTCGCCACCTCAAAGGTCCTCC...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTGTAAAACGCTCAATGTaGATCATGGACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LHYNREQKQTFLRREGAPVKRSM*IMDRRS
Trigger: GGACCTTCTGTCCATGATCCACATTGAGCGTTTTAC...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAGTAAAACGCTCAATGTaGATCATGGACAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGVKRSM*IMDRRS
Trigger: GGACCTTCTGTCCATGATCCACATTGAGCGTTTTAC...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGTGGCCTCCGGGACTCTaGCAGGTAAACACCCATGAA +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEWPPGL*QVNTHE
Trigger: TTCATGGGTGTTTACCTGCCAGAGTCCCGGAGGCCA...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTATTCCTGGGATTAGCTaGTTATCTGGTGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFIPGIS*LSGGES
Trigger: GCTTTCTCCACCAGATAACCAGCTAATCCCAGGAAT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCTTGCTCTTATCTACATaGAGTTGTTCAACCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPLLLST*SCSTCR
Trigger: TCGGCAGGTTGAACAACTCCATGTAGATAAGAGCAA...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CCA 90 bp TGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCGACTTCCTTTGGCAGTaGGGCCAAGAAACAATATAT +
Preference number: 4 (lower is better)
Translates to: WSANVTATASLLRTSEMFDFLWQ*GQETIY
Trigger: ATATATTGTTTCTTGGCCCCACTGCCAAAGGAAGTC...GAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACTGTAGCAATACAGACTaGATAGTAATGGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNCSNTD*IVMAIR
Trigger: CCTAATGGCCATTACTATCCAGTCTGTATTGCTACA...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 72 bp ATGATTGGGTCAAAAGGCTCCTTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTTATCAGGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: MIGSKGSFNSGE*GPQSLVIRILL
Trigger: CAGCAAAATCCTGATAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAAGGAGCCTTTTGACCCAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGGTTTCGGAGGACCTTTaGGGTGGCGAGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: CLILDILLSVCRHRNKGLVSEDL*GGELTS
Trigger: AGATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAAC...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCACGTGTGCCCCACTTaGCATAGGCACAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEHVCPT*HRHSSQ
Trigger: TTGTGAACTGTGCCTATGTCAAGTGGGGCACACGTG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCGCAGGTAAACACCCATaGAGTAGAAAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTAGKHP*SRKGLQ
Trigger: CTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGC...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACTGCCTCACTGTTaGCCAATTCCAAAACCTAAG +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSRLPHC*PIPKPK
Trigger: CTTAGGTTTTGGAATTGGTCAACAGTGAGGCAGTCT...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGGAGCATATAGAAACAAAGGATTaGAAGCCATTCTCATACAGC +
Preference number: 4 (lower is better)
Translates to: RELMVSVKRGTITRNTEHIETKD*KPFSYS
Trigger: GCTGTATGAGAATGGCTTTCAATCCTTTGTTTCTAT...ATGCTCCGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGCCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTA +
Preference number: 4 (lower is better)
Translates to: TAVPHTALTERNRLFDDLPAIIL*LYVHFL
Trigger: TAGAAAATGGACATAAAGTCAAAGAATGATGGCAGG...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCTGCCTCAATCAAAAGTaGCCCTACAGTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFCLNQK*PYSLKE
Trigger: TTCTTTCAAACTGTAGGGTCACTTTTGATTGAGGCA...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTATCTCCTTCTTCAGCTaGATAGTTTCGGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSISFFS*IVSEDL
Trigger: AAGGTCCTCCGAAACTATGCAGCTGAAGAAGGAGAT...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGTTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAATGAAGAGACACGCATaGTTCGTTAGAACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGMKRHA*FVRTGV
Trigger: AACACCAGTTCTAACGAAGCATGCGTGTCTCTTCAT...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGGCACCAGGTTGGGATTaGTTGGGTCTGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: CLILDILLSVCRHRNKGLAPGWD*LGLHSS
Trigger: ACTGCTGTGCAGACCCAAGCAATCCCAACCTGGTGC...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTTTCACATATGCATTATaGTCTGAACCCAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFFTYAL*SEPRAT
Trigger: AGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAA...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLTMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCACCTTTGCCTACACTTaGTCTTATCTACATGGAGTT +
Preference number: 4 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPTFAYT*SYLHGV
Trigger: AACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGT...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp GTCACCCCATGCTTCACATATGCATTATGCTCTGAACCCAGGGCAACTATGACCCATTTTCTAAACCTTTaGCTACACTTGCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: VTPCFTYALCSEPRATMTHFLNL*LHLLLS
Trigger: AGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG...GGTCATAGTTGCCCTGGGTTCAGAGCATAATGCATATGTGAAGCATGGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTCATTTTCTAAACCTTTaGCTACACTTGCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPHFLNL*LHLLLS
Trigger: AGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCCATTTTCTAAACCTTTaGCTACACTTGCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLHFLNL*LHLLLS
Trigger: AGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCCTCCTTCATCCTACCTaGCATCATTCTTTGACTTTA +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFLLHPT*HHSLTL
Trigger: TAAAGTCAAAGAATGATGGCAGGTAGGATGAAGGAG...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGTCTTCCACCTGGGACTaGCTGGTGTTAGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSESSTWD*LVLGTR
Trigger: TCTTGTCCCTAACACCAGCCAGTCCCAGGTGGAAGA...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTATTCCTGGGATTAGCTaGTTATCTGGTGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSIPGIS*LSGGES
Trigger: GCTTTCTCCACCAGATAACCAGCTAATCCCAGGAAT...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATAGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLIAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAGCTGTAGGGATCCTCTaGCTTCGCTCCCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGAVGIL*LRSQRE
Trigger: CTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGC...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAGCAGACAGCGGATGTaGAGCAAGTACCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSESRQRM*SKYPLD
Trigger: ATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCT...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACACTGCTAAGGACATCTaGAATGTTCAGCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: ELSAVMICSVSALCSSRHTAKDI*NVQHCV
Trigger: TACACAGTGCTGAACATTTCAGATGTCCTTAGCAGT...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGACAAAGATGGATGCATTaGGGCCCCCAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGQRWMH*GPQSRT
Trigger: TGTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTG...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTCAGAAAGCCACCTCTaGCCTCTAGTCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLSESHL*PLVSFP
Trigger: AGGAAAACTGACTAGAGGTCAGAGGTGGCTTTCTGA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCTAGTTCAAATACCAAATTCAGAAGCCACCAGCCCTATCAACCTAGCATTCCCCAAGTGCTTGTAACGTaGTCTATGATCTATCTGTAT +
Preference number: 4 (lower is better)
Translates to: PSSNTKFRSHQPYQPSIPQVLVT*SMIYLY
Trigger: ATACAGATAGATCATAGATCACGTTACAAGCACTTG...GGGAATGCTAGGTTGATAGGGCTGGTGGCTTCTGAATTTGGTATTTGAACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTCCTTCAATCTTTATTaGGCAAATATATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHSFNLY*ANIWPR
Trigger: CCTTGGCCATATATTTGCTCAATAAAGATTGAAGGA...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAAATTAATTCCACCATaGAGCTTGAGTGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSKLIPP*SLSAVG
Trigger: CCCTACAGCACTCAAGCTTCATGGTGGAATTAATTT...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTTTCAACCTGCCGAAGTaGTTAAATTCTGTGTACACA +
Preference number: 4 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFFNLPK*LNSVYT
Trigger: TGTGTACACAGAATTTAATCACTTCGGCAGGTTGAA...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATTTGCCGTTACAAATCCCAAACCCATGACAGTAGGAATGTCACCCCATGCTTCCCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTA +
Preference number: 4 (lower is better)
Translates to: ICRYKSQTHDSRNVTPCFPAIIL*LYVHFL
Trigger: TAGAAAATGGACATAAAGTCAAAGAATGATGGCAGG...GAAGCATGGGGTGACATTCCTACTGTCATGGGTTTGGGATTTGTAACGGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGGGGCAGAAAGTAGTCTaGGCAGTGGGAGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLGQKVV*AVGDFS
Trigger: ACTAAAATCTCCCACTGCTCAGACTACTTTCTGCCC...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTTTGCTGGTTGGCCTaGCTTCCAGGCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGFCWLA*LPGLRK
Trigger: CTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAA...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATACCATGAAGCTTGAGTaGTGTAGGGATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYTMKLE*CRDPLA
Trigger: AGCCAGAGGATCCCTACAGCACTCAAGCTTCATGGT...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAATGTCCATGAGGTTCTaGCACATGCCCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGMSMRF*HMPLRA
Trigger: AGCCCTCAAGGGCATGTGGCAGAACCTCATGGACAT...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAGTACCCTCTGGATGTaGAGAAGGAGTTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSESTLWM*RRSSAM
Trigger: CATAGCCGAACTCCTTCTGCACATCCAGAGGGTACT...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTTTAATTCAGGAGAGTTaGGCCCACAGAGTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: PVELSAVMICSVSALCSSLIQES*AHRVLL
Trigger: TAACAAGACTCTGTGGGCCCAACTCTCCTGAATTAA...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGGCAGGTAAACACCCATaGAGTAGAAAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: CLILDILLSVCRHRNKGLAGKHP*SRKGLQ
Trigger: CTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGC...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAGCAGGTAAACACCCATaGAGTAGAAAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGAGKHP*SRKGLQ
Trigger: CTGGAGTCCCTTTCTACTTCATGGGTGTTTACCTGC...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATACTGAGCCCCACTATATaGTTGGGTCAAAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLILSPTI*LGQKAP
Trigger: AGGAGCCTTTTGACCCAATCATATAGTGGGGCTCAG...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCGGATGCAGCCTGATGTaGGGTTTTCAGAAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTGCSLM*GFQKSE
Trigger: TTCACTTTTCTGAAAACCTCACATCAGGCTGCATCC...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAATAGAAACAAAGGATTaGAAGCCATTCTCATACAGC +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGIETKD*KPFSYS
Trigger: GCTGTATGAGAATGGCTTTCAATCCTTTGTTTCTAT...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGAAACTTAGCTTTCCACTaGGTAATGTTTACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGNLAFH*VMFTLH
Trigger: GTGAAGAGTAAACATTACTCAGTGGAAAGCTAAGTT...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATCTGCACACCTGTGTTTaGTGTGGCCTGTCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYLHTCV*CGLSRN
Trigger: ATTTCTTGACAGGCCACAGCAAACACAGGTGTGCAG...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000618043.4
CDS-3UTR GCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGGAAACACGGAGCATATaGAGAACACGATGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLETRSI*RTRWGK
Trigger: TTTTCCCCATCGTGTTCTGCATATGCTCCGTGTTTC...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATAGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTC +
Preference number: 4 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLIVRKGD*LTVDQF
Trigger: GAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGAC...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTGTCAGGAAGGGAGACTaGCTCACTGTTGACCAATTC +
Preference number: 4 (lower is better)
Translates to: SSQHPPQKQTTINRINFIVRKGD*LTVDQF
Trigger: GAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGAC...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTAGAAGAGCCCACCAATaGCCCACACAATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: SSQHPPQKQTTINRINFIRRAHQ*PTQSVT
Trigger: TGTCACTGATTGTGTGGGCCATTGGTGGGCTCTTCT...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAACATGCCAAACGTCTaGTCAGCAAATGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSENMPNV*SANVTA
Trigger: GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTT...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAATTCCGAATAAACAATaGCCTCCGGGACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGIPNKQ*PPGLWQ
Trigger: CTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAAT...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCAGGATGACAGTGTCTaGGGGCATCACAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEQDDSV*GHHKTV
Trigger: AACTGTTTTGTGATGCCCCCAGACACTGTCATCCTG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLLSVTG*RRMVRK
Trigger: CTTCCTGACCATTCTTCTCCACCCAGTCACAGATAA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCACTGCTAAGGACATCTaGAATGTTCAGCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTTAKDI*NVQHCV
Trigger: TACACAGTGCTGAACATTTCAGATGTCCTTAGCAGT...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGGTCACCATCCAAAAATaGAAGGAGGATGACATGGCT +
Preference number: 4 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRVTIQK*KEDDMA
Trigger: AGCCATGTCATCCTCCTTTCATTTTTGGATGGTGAC...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGATCTCCTTCTTCAGCTaGATAGTTTCGGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRISFFS*IVSEDL
Trigger: AAGGTCCTCCGAAACTATGCAGCTGAAGAAGGAGAT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGGAAACACGGAGCATATaGAGAACACGATGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEETRSI*RTRWGK
Trigger: TTTTCCCCATCGTGTTCTGCATATGCTCCGTGTTTC...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAAGCACCAGAATTAGTTaGTTCCACTTGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGSTRIS*FHLCSL
Trigger: CAGGCTGCACAAGTGGAAGCAACTAATTCTGGTGCT...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGAGGAATGTCACCCCATaGTTCACATATGCATTATGC +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLRNVTP*FTYALC
Trigger: GCATAATGCATATGTGAAGCATGGGGTGACATTCCT...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAGAGTCCAGAGTTAACTaGCCTGCTGACATCCTGTTA +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGESRVN*PADILL
Trigger: TAACAGGATGTCAGCAGGGCAGTTAACTCTGGACTC...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGTTATCTGTGACTGGGTaGAGAAGAATGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRLSVTG*RRMVRK
Trigger: CTTCCTGACCATTCTTCTCCACCCAGTCACAGATAA...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTCAAGGGCAAATTTCCTaGCACAGTTTAACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSQHPPQKQTTINRINFIQGQIS*HSLTRP
Trigger: GGGCCTTGTTAAACTGTGCCAGGAAATTTGCCCTTG...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379152.7
ENST00000618043.4
CDS-3UTR TCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGAGAAGAGGATGCAGCCTaGTGTGAGGTTTTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGEEDAA*CEVFRK
Trigger: TTTTCTGAAAACCTCACATCAGGCTGCATCCTCTTC...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATAAAATGAAAGGAGGATaGCATGGCTCACTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYKMKGG*HGSLSK
Trigger: CTTGCTTAGTGAGCCATGTCATCCTCCTTTCATTTT...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGACATAGCTGCCTTAACTaGCTGCCTTGGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: VCLILDILLSVCRHRNKGHSCLN*LPWCLF
Trigger: GAATAAACACCAAGGCAGTCAGTTAAGGCAGCTATG...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTGCCTCAATCAAAAGTaGCCCTACAGTTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLCLNQK*PYSLKE
Trigger: TTCTTTCAAACTGTAGGGTCACTTTTGATTGAGGCA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CCA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGGTCAGGTGTTGTACCTaGTCAGAGAAAAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: CLILDILLSVCRHRNKGLVRCCT*SEKNFP
Trigger: TGGGAAGTTTTTCTCTGACCAGGTACAACACCTGAC...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTAGGTTTTCAGAAAAGTaGAATGACCTAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SSQHPPQKQTTINRINFIRFSEK*NDLAPG
Trigger: ACCTGGTGCTAGGTCATTTCACTTTTCTGAAAACCT...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATCTCCTTCATCCTACCTaGCATCATTCTTTGACTTTA +
Preference number: 4 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYLLHPT*HHSLTL
Trigger: TAAAGTCAAAGAATGATGGCAGGTAGGATGAAGGAG...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTCCAGTAGAACTATCTaGAGTGATGATATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLSSRTI*SDDMFC
Trigger: ACAGAACATATCATCACTGCAGATAGTTCTACTGGA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTCCAGTAGAACTATCTaGAGTGATGATATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTSSRTI*SDDMFC
Trigger: ACAGAACATATCATCACTGCAGATAGTTCTACTGGA...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
3UTR CAA 72 bp AACAGGCAGCAACTTGTATGTCTAATATTAGACATCTaGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTG +
Preference number: 4 (lower is better)
Translates to: NRQQLVCLILDI*LSVCRHRNKGL
Trigger: CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATACAAGTTGCTGCCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCAAGTGCTTGTAACGTaGTCTATGATCTATCTGTAT +
Preference number: 4 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEQVLVT*SMIYLY
Trigger: ATACAGATAGATCATAGATCACGTTACAAGCACTTG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR TCA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGAACTTAGCTTTCCACTaGGTAATGTTTACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRNLAFH*VMFTLH
Trigger: GTGAAGAGTAAACATTACTCAGTGGAAAGCTAAGTT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTTTCCCTCTTCCCCACTaGACTTTACCAAGTAAATAT +
Preference number: 4 (lower is better)
Translates to: SSQHPPQKQTTINRINFIFPLPH*TLPSKY
Trigger: ATATTTACTTGGTAAAGTGCAGTGGGGAAGAGGGAA...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR GCA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGCATTTTCTAAACCTTTaGCTACACTTGCTCTTATCT +
Preference number: 4 (lower is better)
Translates to: FSKPLPTLALIYMELFNLHFLNL*LHLLLS
Trigger: AGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATACCTGCCATCATTCTTTaGCTTTATGTCCATTTTCTA +
Preference number: 4 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLIPAIIL*LYVHFL
Trigger: TAGAAAATGGACATAAAGTCAAAGAATGATGGCAGG...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR TCA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGAACTTAGCTTTCCACTaGGTAATGTTTACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CLILDILLSVCRHRNKGLNLAFH*VMFTLH
Trigger: GTGAAGAGTAAACATTACTCAGTGGAAAGCTAAGTT...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR GCA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATAAATATCTGTAAGAGCTaGATCTACCTATCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLINICKS*IYLSGV
Trigger: TACTCCTGATAGGTAGATGCAGCTCTTACAGATATT...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
3UTR CAA 72 bp GAAGTGATTAAATTCTGTGTACACAGGCCGTATATATaGCAGCTAATTAAAACAACAAACATCCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: EVIKFCVHRPYI*QLIKTTNILGM
Trigger: CATGCCTAGGATGTTTGTTGTTTTAATTAGCTGCAATATATACGGCCTGTGTACACAGAATTTAATCACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS CCA 90 bp CAGCGCCTCTCGCGCGGCCCCGATCGGCCAGCCCCGCGCTGTTTCTaGGCCGCATCCCGCTCCCGACGGCGGCAGCGAAGACCCACAGGG +
Preference number: 5 (lower is better)
Translates to: QRLSRGPDRPAPRCF*AASRSRRRQRRPTG
Trigger: CCCTGTGGGTCTTCGCTGCCGCCGTCGGGAGCGGGATGCGGCCCAGAAACAGCGCGGGGCTGGCCGATCGGGGCCGCGCGAGAGGCGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564708.1
ENST00000568088.5
CDS-3UTR CAA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGAGAGGCCGGGGCCGCTaGGGCTCCTTCCAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGRGRGR*GSFQRR
Trigger: CCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTCT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS GCA 90 bp GGTGTGGGCCTCCCAGGCTCCCTGGCTTCCATGACAAACGGTTCCTaGACACCTGTGTTTGCTGTGGCCTGTAATCCCCACTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GVGLPGSLASMTNGS*TPVFAVACNPHSGG
Trigger: GCCTCCTGAGTGGGGATTACAGGCCACAGCAAACACAGGTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGCCTGGGAGGCCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000563146.1
ENST00000566454.5
ENST00000566834.5
ENST00000568024.1
ENST00000568088.5
ENST00000648130.1
CDS-3UTR CAA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAGAGGCCGGGGCCGCTaGGGCTCCTTCCAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTRGRGR*GSFQRR
Trigger: CCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTCT...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCAGAGCAGGCCTAACTaGGGTGGAGAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGQSRPN*GGEPSL
Trigger: CAGGCTGGGCTCTCCACCCAAGTTAGGCCTGCTCTG...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGCCAGCTTAGCTCAGACAGAAGTCATGTTCTTAGCGTTCAGGCAAGTCAGCCTAGAGGCCGGGGCCGCTaGGGCTCCTTCCAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: CQLSSDRSHVLSVQASQPRGRGR*GSFQRR
Trigger: CCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTCT...AGGCTGACTTGCCTGAACGCTAAGAACATGACTTCTGTCTGAGCTAAGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGAGAGGCCGGGGCCGCTaGGGCTCCTTCCAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: IACECLLLTVMGEGELHRRGRGR*GSFQRR
Trigger: CCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTCT...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS TCA 90 bp CAAGATGGTAGGTGGGTGTGGGCCTCCCAGGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACACCTGTGTTTGCTGTGGCCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: QDGRWVWASQAPWLP*QTVPAHLCLLWPVK
Trigger: CTTGACAGGCCACAGCAAACACAGGTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGCCTGGGAGGCCCACACCCACCTACCATCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000562727.1
ENST00000563080.1
ENST00000564708.1
ENST00000618043.4
CDS-3UTR CAA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGCCTGAGCCGATCATGTaGCCCACCACCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEPEPIM*PTTRLT
Trigger: GGTCAGCCTGGTGGTGGGCAACATGATCGGCTCAGG...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGCCCCCACCTTGAGGTaGGCCCAGATCCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSAPTLR*AQILSL
Trigger: GAGACTCAGGATCTGGGCCAACCTCAAGGTGGGGGC...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp CTTGTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGGCCCCCACCTTGAGGTaGGCCCAGATCCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LVMSMRFCHMPLRALSPEAPTLR*AQILSL
Trigger: GAGACTCAGGATCTGGGCCAACCTCAAGGTGGGGGC...CTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTCAGAGCAGGCCTAACTaGGGTGGAGAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSQSRPN*GGEPSL
Trigger: CAGGCTGGGCTCTCCACCCAAGTTAGGCCTGCTCTG...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS TCA 90 bp CAAGATGGTAGGTGGGTGTGGGCCTCCCAGGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACACCTGTGTTTGCTGTGGCCTGTAATC +
Preference number: 5 (lower is better)
Translates to: QDGRWVWASQAPWLP*QTVPAHLCLLWPVI
Trigger: GATTACAGGCCACAGCAAACACAGGTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGCCTGGGAGGCCCACACCCACCTACCATCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000563146.1
ENST00000566454.5
ENST00000566834.5
ENST00000568024.1
ENST00000568088.5
ENST00000648130.1
CDS GCA 90 bp ACTGCTAAGCAGCCCACCCTCTGGCCTAGACTCATGACCTCATCCTaGAGAGCTGAGGAGGGTGCAGTAAGACAGACTGAGCTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: TAKQPTLWPRLMTSS*RAEEGAVRQTELCR
Trigger: CCTGCACAGCTCAGTCTGTCTTACTGCACCCTCCTCAGCTCTGCAGGATGAGGTCATGAGTCTAGGCCAGAGGGTGGGCTGCTTAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562863.1
CDS-3UTR CAA 90 bp CGCTACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: RYDLGVSERVLHTCAPLDAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...GTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR CAA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTAGCCCCCACCTTGAGGTaGGCCCAGATCCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: VMSMRFCHMPLRALSPELAPTLR*AQILSL
Trigger: GAGACTCAGGATCTGGGCCAACCTCAAGGTGGGGGC...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS GCA 90 bp GGTGTGGGCCTCCCAGGCTCCCTGGCTTCCATGACAAACGGTTCCTaGACACCTGTGTTTGCTGTGGCCTGTCAAGAAATACGCGAACAT +
Preference number: 5 (lower is better)
Translates to: GVGLPGSLASMTNGS*TPVFAVACQEIREH
Trigger: ATGTTCGCGTATTTCTTGACAGGCCACAGCAAACACAGGTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGCCTGGGAGGCCCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000562727.1
ENST00000563080.1
ENST00000564708.1
ENST00000618043.4
CDS-3UTR CAA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGAGTTTCGGAGGACCTTaGAGGTGGCGAGCTGACATC +
Preference number: 5 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQSFGGP*RWRADI
Trigger: GATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAACT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAACCCTGAGCCGATCATGTaGCCCACCACCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: VASSCCSGHHRSKETTQNPEPIM*PTTRLT
Trigger: GGTCAGCCTGGTGGTGGGCAACATGATCGGCTCAGG...GTTCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAAAAACACGCTCAGCTaGAGAGGCCGGGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTKNTLS*RGRGRL
Trigger: CAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTTT...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAAAAACACGCTCAGCTaGAGAGGCCGGGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: ACECLLLTVMGEGELHREKNTLS*RGRGRL
Trigger: CAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTTT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGCTGTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTAGTTTCGGAGGACCTTaGAGGTGGCGAGCTGACATC +
Preference number: 5 (lower is better)
Translates to: CCRDPLASLPKRGSWEKSSFGGP*RWRADI
Trigger: GATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAACT...AGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCCTGGCACAGAGTTTCGGAGGACCTTaGAGGTGGCGAGCTGACATC +
Preference number: 5 (lower is better)
Translates to: GMVQLNMPNVWSANVLAQSFGGP*RWRADI
Trigger: GATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAACT...CTGTGCCAGGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563080.1
CDS-3UTR CAA 90 bp AACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTGAACCTGAGCCGATCATGTaGCCCACCACCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: NKAHDNDGNERYDLGVSEPEPIM*PTTRLT
Trigger: GGTCAGCCTGGTGGTGGGCAACATGATCGGCTCAGG...TTCACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR CAA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACCTGCACACCTGTGTTaGCTGTGGCCTGTAATCCCC +
Preference number: 5 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKPAHLC*LWPVIP
Trigger: GGGGATTACAGGCCACAGCAAACACAGGTGTGCAGG...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566454.5
ENST00000648130.1
CDS-3UTR CAA 90 bp CCCTTATCTGTGACTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTAGTTTCGGAGGACCTTaGAGGTGGCGAGCTGACATC +
Preference number: 5 (lower is better)
Translates to: PLSVTGWRRMVRKGDCLTSFGGP*RWRADI
Trigger: GATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAACT...AGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAGTCACAGATAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGCCTGAGCCGATCATGTaGCCCACCACCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: TAVPHTALTERNRLFDDLPEPIM*PTTRLT
Trigger: GGTCAGCCTGGTGGTGGGCAACATGATCGGCTCAGG...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp GTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAAGCTCAAAAACACGCTCAGCTaGAGAGGCCGGGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: VFTDLHREKTEVPTSTKLKNTLS*RGRGRL
Trigger: CAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTTT...GAGCTTGGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGAGAGGAACAGGTTATTaGATGACTTGGGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGRGTGY*MTWAHE
Trigger: CTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCT...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGATTAGTTGCTTCCACTaGTGCAGCCTGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQISCFH*CSLLKS
Trigger: GCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAAT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGCAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWQASQP*HKTPCR
Trigger: ACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTG...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGTGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGCAGGGAGGTACCTTCTaGCCGCCTCTTTTAGGATTT +
Preference number: 5 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQQGGTF*PPLLGF
Trigger: AAATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTG...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGTACAGTAGGACCCCTTaGCCTCAATCAAAAGTGACC +
Preference number: 5 (lower is better)
Translates to: GVCQASRFFSAQDDSVWGYSRTP*PQSKVT
Trigger: GGTCACTTTTGATTGAGGCAAAGGGGTCCTACTGTA...CCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CTCCCAGTCTTCACTGATCTCCACAGGGAGAAAACAGAAGTCCCCACAAGTACCAGGCAGGAGAATCGCTaGAACCAGGGAGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LPVFTDLHREKTEVPTSTRQENR*NQGVGG
Trigger: ACCTCCGACTCCCTGGTTCAAGCGATTCTCCTGCCT...GGTACTTGTGGGGACTTCTGTTTTCTCCCTGTGGAGATCAGTGAAGACTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566454.5
ENST00000648130.1
CDS CCA 90 bp TATGATCTCGGAACAAATGCAATCACTGCTAAGCAGCCCACCCTCTaGCCTAGACTCATGACCTCATCCTGCAGAGCTGAGGAGGGTGCA +
Preference number: 5 (lower is better)
Translates to: YDLGTNAITAKQPTL*PRLMTSSCRAEEGA
Trigger: TGCACCCTCCTCAGCTCTGCAGGATGAGGTCATGAGTCTAGGCCAGAGGGTGGGCTGCTTAGCAGTGATTGCATTTGTTCCGAGATCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562863.1
CDS CCA 90 bp GGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCTaGGGGCAGGGCACAGAAAAGGCACTTAAACGCACAGGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: GMVQLNMPNVWSANV*GQGTEKALKRTGFH
Trigger: ATGAAACCCTGTGCGTTTAAGTGCCTTTTCTGTGCCCTGCCCCCAGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562863.1
CDS-3UTR CAA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAAGTTTCGGAGGACCTTaGAGGTGGCGAGCTGACATC +
Preference number: 5 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRSFGGP*RWRADI
Trigger: GATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAACT...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCCCTGAGCCGATCATGTaGCCCACCACCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: WSANVTATASLLRTSEMFPEPIM*PTTRLT
Trigger: GGTCAGCCTGGTGGTGGGCAACATGATCGGCTCAGG...GAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000566579.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTTGTACCAGCACACCCTaGGGTGAGACAAAGATCCCT +
Preference number: 5 (lower is better)
Translates to: VIRILLVGLPSRPQKATSCTSTP*GETKIP
Trigger: AGGGATCTTTGTCTCACCCAAGGGTGTGCTGGTACA...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TACGACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACATATGTACCAGCACACCCTaGGGTGAGACAAAGATCCCT +
Preference number: 5 (lower is better)
Translates to: YDLGVSERVLHTCAPLDICTSTP*GETKIP
Trigger: AGGGATCTTTGTCTCACCCAAGGGTGTGCTGGTACA...TATGTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR CAA 90 bp GTGATGTCCATGAGGTTCTGCCACATGCCCTTGAGGGCTCTGAGTCCAGAGTTATGTACCAGCACACCCTaGGGTGAGACAAAGATCCCT +
Preference number: 5 (lower is better)
Translates to: VMSMRFCHMPLRALSPELCTSTP*GETKIP
Trigger: AGGGATCTTTGTCTCACCCAAGGGTGTGCTGGTACA...TAACTCTGGACTCAGAGCCCTCAAGGGCATGTGGCAGAACCTCATGGACATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGAGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ACAGCAATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TAMGMVQLNMPNVWSANVAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...GACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379152.7
ENST00000563080.1
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: IACECLLLTVMGEGELHRSGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTGCTTAAAGGATTAGCTCCAGAGGAGCCCTGGGATGGGTGCCAGCTTAGCTCACAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: LLKGLAPEEPWDGCQLSSQASQP*HKTPCR
Trigger: ACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTG...TGAGCTAAGCTGGCACCCATCCCAGGGCTCCTCTGGAGCTAATCCTTTAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GTTATCAGGATTTTGCTGGTTGGCCTGCCTTCCAGGCCTCAGAAAGCCACCTCTCAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: VIRILLVGLPSRPQKATSQASQP*HKTPCR
Trigger: ACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTG...AGAGGTGGCTTTCTGAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCCAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTQASQP*HKTPCR
Trigger: ACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTG...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGTGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: ACECLLLTVMGEGELHREWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GACCTTGGCGTAAGTGAACGTGTCCTGCACACGTGTGCCCCACTTGACATAGGCTACAGTAGGACCCCTTaGCCTCAATCAAAAGTGACC +
Preference number: 5 (lower is better)
Translates to: DLGVSERVLHTCAPLDIGYSRTP*PQSKVT
Trigger: GGTCACTTTTGATTGAGGCAAAGGGGTCCTACTGTA...GCCTATGTCAAGTGGGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS TCA 90 bp TATAAGGAAGTACTCACAGCCTTTCAAGTCTGCTCCTCCCAGATCTaGAATCTGGGAGCAGTTCTGAGAGACAAGCCCCGGATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: YKEVLTAFQVCSSQI*NLGAVLRDKPRMAG
Trigger: CCCAGCCATCCGGGGCTTGTCTCTCAGAACTGCTCCCAGATTTCAGATCTGGGAGGAGCAGACTTGAAAGGCTGTGAGTACTTCCTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562727.1
CDS CCA 90 bp ACTGAGCTGTGCAGGGTGGCTCAGTATCAGGAGATGATGAACAAATaGGGATCCCAAGAGACTCACCACAGCCACAGCATCACTGCTAAG +
Preference number: 5 (lower is better)
Translates to: TELCRVAQYQEMMNK*GSQETHHSHSITAK
Trigger: CTTAGCAGTGATGCTGTGGCTGTGGTGAGTCTCTTGGGATCCCCATTTGTTCATCATCTCCTGATACTGAGCCACCCTGCACAGCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562863.1
CDS-3UTR CAA 90 bp ATTGGTCAGGATGTAGATGAGCGTCACAATTGGCATAGAAATCCCAATGGCCAACCTGAGCCGATCATGTaGCCCACCACCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: IGQDVDERHNWHRNPNGQPEPIM*PTTRLT
Trigger: GGTCAGCCTGGTGGTGGGCAACATGATCGGCTCAGG...TTGGCCATTGGGATTTCTATGCCAATTGTGACGCTCATCTACATCCTGACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566579.5
ENST00000648130.1
CDS-3UTR CAA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGACCTGAGCCGATCATGTaGCCCACCACCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGPEPIM*PTTRLT
Trigger: GGTCAGCCTGGTGGTGGGCAACATGATCGGCTCAGG...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGTGGTGTACCAGCACACCCTaGGGTGAGACAAAGATCCCT +
Preference number: 5 (lower is better)
Translates to: GIGVKRSMWIMDRRSGRWCTSTP*GETKIP
Trigger: AGGGATCTTTGTCTCACCCAAGGGTGTGCTGGTACA...CCACCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: PNVWSANVTATASLLRTSAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AGGAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCCCACGAAGAACAACCTaGATGAAGCAAAGATGGATG +
Preference number: 5 (lower is better)
Translates to: RKEAAADSGCGASTLWMCPRRTT*MKQRWM
Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGG...GCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGAGTGCCATGGTGCAATaGAACAGTAAAGCAGGGATA +
Preference number: 5 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQSAMVQ*NSKAGI
Trigger: TATCCCTGCTTTACTGTTCAATTGCACCATGGCACT...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGTTGTACTGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GSSRPRMTVSGGITKQLYWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...GTACAACTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ATGGGGATGGTCCAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCACAGCCTGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: MGMVQLNMPNVWSANVTAWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...GGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGTTTGTTCATCTGTCCTaGCTGGACCTGAGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: ACECLLLTVMGEGELHREFVHLS*LDLSQV
Trigger: CACTTGGCTCAGGTCCAGCAAGGACAGATGAACAAA...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGTTTGTTCATCTGTCCTaGCTGGACCTGAGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRFVHLS*LDLSQV
Trigger: CACTTGGCTCAGGTCCAGCAAGGACAGATGAACAAA...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGATTAGTTGCTTCCACTaGTGCAGCCTGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRISCFH*CSLLKS
Trigger: GCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAAT...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CCCATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGCATCACAAAACAGTaGTACAATCCAATGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PMGYVKLAGSSRPRMTVSGITKQ*YNPMQP
Trigger: CGGCTGCATTGGATTGTACAACTGTTTTGTGATGCC...AGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAACAGGGCATCACAAAACAGTaGTACAATCCAATGCAGCCG +
Preference number: 5 (lower is better)
Translates to: LAGSSRPRMTVSGGITKQGITKQ*YNPMQP
Trigger: CGGCTGCATTGGATTGTACAACTGTTTTGTGATGCC...CTGTTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGGGGCATCACAAAATCGTCGGGCAGGAATTaGCCGTTACAAATCCCAAAC +
Preference number: 5 (lower is better)
Translates to: KLAGSSRPRMTVSGGITKSSGRN*PLQIPN
Trigger: GTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGA...TTTTGTGATGCCCCCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCAGGGATAGGTGTAAAACGCTCAATGTGGATCATGGACAGAAGGTCCGGTAGGTGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: AGIGVKRSMWIMDRRSGRWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...CCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CTGGGTGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCCAGGGAGGTACCTTCTaGCCGCCTCTTTTAGGATTT +
Preference number: 5 (lower is better)
Translates to: LGGEEWSGRETASLLTNSQGGTF*PPLLGF
Trigger: AAATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTG...GGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CCAATGAGGGAATTAATGGTGTCAGTGAAGAGGGGCACTATCACCAGAAACACGAGGCAGGAGAATCGCTaGAACCAGGGAGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: PMRELMVSVKRGTITRNTRQENR*NQGVGG
Trigger: ACCTCCGACTCCCTGGTTCAAGCGATTCTCCTGCCT...CGTGTTTCTGGTGATAGTGCCCCTCTTCACTGACACCATTAATTCCCTCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR CAA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTAGAGGCCGGGGCCGCTaGGGCTCCTTCCAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SSQHPPQKQTTINRINFIRGRGR*GSFQRR
Trigger: CCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTCT...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ATCTGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: IWWRKLKLGSGIFKRQAHSGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...ATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCAATTAGTTGCTTCCACTaGTGCAGCCTGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPISCFH*CSLLKS
Trigger: GCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAAT...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTCAGAGCAGGCCTAACTaGGGTGGAGAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PVELSAVMICSVSALCSSQSRPN*GGEPSL
Trigger: CAGGCTGGGCTCTCCACCCAAGTTAGGCCTGCTCTG...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGGCATCACAAAACAGTaGTACAATCCAATGCAGCCG +
Preference number: 5 (lower is better)
Translates to: ACECLLLTVMGEGELHREGITKQ*YNPMQP
Trigger: CGGCTGCATTGGATTGTACAACTGTTTTGTGATGCC...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGGTACTCGTCGGGCAGGAATTaGCCGTTACAAATCCCAAAC +
Preference number: 5 (lower is better)
Translates to: VSVSYSLSWGKVSYTGRYSSGRN*PLQIPN
Trigger: GTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGA...GTACCTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ACGTGGCTAGTAGCTGTTGCAGCGGACACCACAGGTCTAAGGAAACAACACAGATCGTCGGGCAGGAATTaGCCGTTACAAATCCCAAAC +
Preference number: 5 (lower is better)
Translates to: TWLVAVAADTTGLRKQHRSSGRN*PLQIPN
Trigger: GTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGA...TCTGTGTTGTTTCCTTAGACCTGTGGTGTCCGCTGCAACAGCTACTAGCCACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTCAGGGAGGTACCTTCTaGCCGCCTCTTTTAGGATTT +
Preference number: 5 (lower is better)
Translates to: WGKVSYTGRYLLAASFRIQGGTF*PPLLGF
Trigger: AAATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTG...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS TCA 90 bp CAGTTCACTAGCCTCCAAGTCTTTGAGGGAGGCTCACCTTCCCCTTaGCCCTGGGTTCTTTCTATTGAGAAAGACCCAACTTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: QFTSLQVFEGGSPSP*PWVLSIEKDPTFSV
Trigger: CACAGAGAAAGTTGGGTCTTTCTCAATAGAAAGAACCCAGGGTCAAGGGGAAGGTGAGCCTCCCTCAAAGACTTGGAGGCTAGTGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563208.1
CDS-3UTR CAA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGATCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGSGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LHYNREQKQTFLRREGAPSGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACGGGTGGCTGTGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: AVMICSVSALCSSRHGWLWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...CAGCCACCCGTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGTTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: ACECLLLTVMGEGELHREFNSGE*GPQSLV
Trigger: AACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCATGTTCTCCAAGCCATaGACAGCTGAGAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: GGGGSHFISSKLLLCHTTMFSKP*TAERIQ
Trigger: CTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACAT...GGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp GTAGGGATCCTCTGGCTTCGCTCCCAAAGAGAGGATCCTGGGAGAAGTCTGTATATGTTCTCCAAGCCATaGACAGCTGAGAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: VGILWLRSQREDPGRSLYMFSKP*TAERIQ
Trigger: CTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACAT...ATACAGACTTCTCCCAGGATCCTCTCTTTGGGAGCGAAGCCAGAGGATCCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTCAGGGAGGTACCTTCTaGCCGCCTCTTTTAGGATTT +
Preference number: 5 (lower is better)
Translates to: PNVWSANVTATASLLRTSQGGTF*PPLLGF
Trigger: AAATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTG...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGCAGGGAGGTACCTTCTaGCCGCCTCTTTTAGGATTT +
Preference number: 5 (lower is better)
Translates to: IACECLLLTVMGEGELHRQGGTF*PPLLGF
Trigger: AAATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTG...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCATACAGTAGGACCCCTTaGCCTCAATCAAAAGTGACC +
Preference number: 5 (lower is better)
Translates to: REGEVPISLAVSFCCAIPYSRTP*PQSKVT
Trigger: GGTCACTTTTGATTGAGGCAAAGGGGTCCTACTGTA...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTGAAATGTTCTGTACCAGCACACCCTaGGGTGAGACAAAGATCCCT +
Preference number: 5 (lower is better)
Translates to: WSANVTATASLLRTSEMFCTSTP*GETKIP
Trigger: AGGGATCTTTGTCTCACCCAAGGGTGTGCTGGTACA...GAACATTTCAGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000566579.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGGGGGAAGGTGAGTTACACAGGGAGGTACCTTCTTGCCGCCTCTTTTAGGATTAGTGCCATGGTGCAATaGAACAGTAAAGCAGGGATA +
Preference number: 5 (lower is better)
Translates to: WGKVSYTGRYLLAASFRISAMVQ*NSKAGI
Trigger: TATCCCTGCTTTACTGTTCAATTGCACCATGGCACT...AATCCTAAAAGAGGCGGCAAGAAGGTACCTCCCTGTGTAACTCACCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GAGCCCACGAAGAACAACCTTGATGAAGCAAAGATGGATGCATTGAGGCCCCCATTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: EPTKNNLDEAKMDALRPPFNSGE*GPQSLV
Trigger: AACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA...TGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGCAGAGCAGGCCTAACTaGGGTGGAGAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: FSKPLPTLALIYMELFNLQSRPN*GGEPSL
Trigger: CAGGCTGGGCTCTCCACCCAAGTTAGGCCTGCTCTG...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGCTAATATTAGACATCTaGCTTTCTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQLILDI*LSVCRH
Trigger: ATGCCTACAGACAGAAAGCAAGATGTCTAATATTAG...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGAACCTTTGCCTACACTaGCTCTTATCTACATGGAGT +
Preference number: 5 (lower is better)
Translates to: ACECLLLTVMGEGELHRENLCLH*LLSTWS
Trigger: ACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTT...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CATGGGGTATGTCAAGCTAGCAGGTTCTTCTCGGCCCAGGATGACAGTGTCTGGCCATTTTCTAAACCTTaGCCTACACTTGCTCTTATC +
Preference number: 5 (lower is better)
Translates to: HGVCQASRFFSAQDDSVWPFSKP*PTLALI
Trigger: GATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATGG...CCAGACACTGTCATCCTGGGCCGAGAAGAACCTGCTAGCTTGACATACCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GAAAGAGGCAGCAGCAGACAGCGGATGTGGAGCAAGTACCCTCTGGATGTGCAGCAATTGCATATTCTTTaGGGGAGGTTTGTCAATAAC +
Preference number: 5 (lower is better)
Translates to: ERGSSRQRMWSKYPLDVQQLHIL*GRFVNN
Trigger: GTTATTGACAAACCTCCCCAAAAGAATATGCAATTG...CTGCACATCCAGAGGGTACTTGCTCCACATCCGCTGTCTGCTGCTGCCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACCCTGCACACCTGTGTTaGCTGTGGCCTGTAATCCCC +
Preference number: 5 (lower is better)
Translates to: ELSAVMICSVSALCSSRHPAHLC*LWPVIP
Trigger: GGGGATTACAGGCCACAGCAAACACAGGTGTGCAGG...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566454.5
ENST00000648130.1
CDS-3UTR CAA 90 bp CCAAACGTCTGGTCAGCAAATGTCACAGCCACAGCATCACTGCTAAGGACATCTCCACGAAGAACAACCTaGATGAAGCAAAGATGGATG +
Preference number: 5 (lower is better)
Translates to: PNVWSANVTATASLLRTSPRRTT*MKQRWM
Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGG...AGATGTCCTTAGCAGTGATGCTGTGGCTGTGACATTTGCTGACCAGACGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379152.7
ENST00000567346.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGCCATTTTCTAAACCTTaGCCTACACTTGCTCTTATC +
Preference number: 5 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRPFSKP*PTLALI
Trigger: GATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATGG...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGTACAGTAGGACCCCTTaGCCTCAATCAAAAGTGACC +
Preference number: 5 (lower is better)
Translates to: TAVPHTALTERNRLFDDLYSRTP*PQSKVT
Trigger: GGTCACTTTTGATTGAGGCAAAGGGGTCCTACTGTA...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp GGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCAGGGTAAGTGAGGTAAATTaGAATGCAGATGGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: GGGSHFISSKLLLCHTTRVSEVN*NADGRL
Trigger: TAACCTGCCATCTGCATTCAAATTTACCTCACTTAC...CCTGGTGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR CAA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACTGTACCAGCACACCCTaGGGTGAGACAAAGATCCCT +
Preference number: 5 (lower is better)
Translates to: ELSAVMICSVSALCSSRHCTSTP*GETKIP
Trigger: AGGGATCTTTGTCTCACCCAAGGGTGTGCTGGTACA...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTTGGGCCCACAGAGTCTaGTTATCAGGATTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LHYNREQKQTFLRREGAPWAHRV*LSGFCW
Trigger: CCAGCAAAATCCTGATAACAAGACTCTGTGGGCCCA...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAAAGAGGAACAGGTTATTaGATGACTTGGGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: LITVVKLLTDFLWQWGQERGTGY*MTWAHE
Trigger: CTCATGGGCCCAAGTCATCAAATAACCTGTTCCTCT...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTCAGAGCAGGCCTAACTaGGGTGGAGAGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SSQHPPQKQTTINRINFIQSRPN*GGEPSL
Trigger: CAGGCTGGGCTCTCCACCCAAGTTAGGCCTGCTCTG...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGGAGCACAGGCCGTATATATaGCAGCTAATTAAAACAACA +
Preference number: 5 (lower is better)
Translates to: ACECLLLTVMGEGELHREHRPYI*QLIKTT
Trigger: TGTTGTTTTAATTAGCTGCAATATATACGGCCTGTG...CTCCCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACCATTTTCTAAACCTTaGCCTACACTTGCTCTTATC +
Preference number: 5 (lower is better)
Translates to: REGEVPISLAVSFCCAIPPFSKP*PTLALI
Trigger: GATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATGG...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTGAACGTGTAAGTGAGGTAAATTaGAATGCAGATGGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: KAHDNDGNERYDLGVSERVSEVN*NADGRL
Trigger: TAACCTGCCATCTGCATTCAAATTTACCTCACTTAC...ACGTTCACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563080.1
ENST00000648130.1
CDS-3UTR CAA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGGCAAAGATGGATGCATaGAGGCCCCCAAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: FSKPLPTLALIYMELFNLAKMDA*RPPKQD
Trigger: GTCCTGCTTTGGGGGCCTCAATGCATCCATCTTTGC...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CTGATAACGGTTGTGAAATTACTGACTGACTTCCTTTGGCAGTGGGGCCAAGAACCACGAAGAACAACCTaGATGAAGCAAAGATGGATG +
Preference number: 5 (lower is better)
Translates to: LITVVKLLTDFLWQWGQEPRRTT*MKQRWM
Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGG...TTCTTGGCCCCACTGCCAAAGGAAGTCAGTCAGTAATTTCACAACCGTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCATGGTGCAATTGAACAGTAAAGCAGGGATAGGTGTAAAACGCTCAATGTGGAGTGCCATGGTGCAATaGAACAGTAAAGCAGGGATA +
Preference number: 5 (lower is better)
Translates to: AMVQLNSKAGIGVKRSMWSAMVQ*NSKAGI
Trigger: TATCCCTGCTTTACTGTTCAATTGCACCATGGCACT...CCACATTGAGCGTTTTACACCTATCCCTGCTTTACTGTTCAATTGCACCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGAAAAACACGCTCAGCTaGAGAGGCCGGGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: CLILDILLSVCRHRNKGLKNTLS*RGRGRL
Trigger: CAAGCGGCCCCGGCCTCTCAAGCTGAGCGTGTTTTT...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTAGACACATTAGTTGCTTCCACTaGTGCAGCCTGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: ELSAVMICSVSALCSSRHISCFH*CSLLKS
Trigger: GCTCTTCAGCAGGCTGCACAAGTGGAAGCAACTAAT...GTGTCTACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AGGGAGGGGGAGGTTCCCATTTCATTAGCAGTAAGCTTCTGCTGTGCCATACCACACAGGCCGTATATATaGCAGCTAATTAAAACAACA +
Preference number: 5 (lower is better)
Translates to: REGEVPISLAVSFCCAIPHRPYI*QLIKTT
Trigger: TGTTGTTTTAATTAGCTGCAATATATACGGCCTGTG...TGGTATGGCACAGCAGAAGCTTACTGCTAATGAAATGGGAACCTCCCCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGACCACGAAGAACAACCTaGATGAAGCAAAGATGGATG +
Preference number: 5 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGPRRTT*MKQRWM
Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGG...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGAAGAGAAGGGGCTCCTAGTGCCATGGTGCAATaGAACAGTAAAGCAGGGATA +
Preference number: 5 (lower is better)
Translates to: LHYNREQKQTFLRREGAPSAMVQ*NSKAGI
Trigger: TATCCCTGCTTTACTGTTCAATTGCACCATGGCACT...AGGAGCCCCTTCTCTTCTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTTCAGGATTTTGCTGGTaGGCCTGCCTTCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: SSQHPPQKQTTINRINFISGFCW*ACLPGL
Trigger: GAGGCCTGGAAGGCAGGCCAACCAGCAAAATCCTGA...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTGATAGAATCTAAAAGGGGTACCAGTGGGTCCCTTGTAGCAATACAGACTGGATTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: LIESKRGTSGSLVAIQTGFNSGE*GPQSLV
Trigger: AACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA...TCCAGTCTGTATTGCTACAAGGGACCCACTGGTACCCCTTTTAGATTCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ACAGCAGTCCCTCACACTGCCCTTACAGAGAGGAACAGGTTATTTGATGACTTGAATACAATCAGCCTATaGCATCCTGTAGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: TAVPHTALTERNRLFDDLNTISL*HPVDEE
Trigger: CTCTTCATCTACAGGATGCAATAGGCTGATTGTATT...CAAGTCATCAAATAACCTGTTCCTCTCTGTAAGGGCAGTGTGAGGGACTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGCAGGCAAGTCAGCCTTaGCATAAGACACCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: FSKPLPTLALIYMELFNLQASQP*HKTPCR
Trigger: ACGACAGGGTGTCTTATGCAAAGGCTGACTTGCCTG...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ATAGCCTGTGAGTGTCTCTTACTCACTGTCATGGGGGAAGGTGAGTTACACAGGCTAATATTAGACATCTaGCTTTCTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: IACECLLLTVMGEGELHRLILDI*LSVCRH
Trigger: ATGCCTACAGACAGAAAGCAAGATGTCTAATATTAG...CCTGTGTAACTCACCTTCCCCCATGACAGTGAGTAAGAGACACTCACAGGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGTGTACCAGCACACCCTaGGGTGAGACAAAGATCCCT +
Preference number: 5 (lower is better)
Translates to: LLSKDFALQSGTKTDLSECTSTP*GETKIP
Trigger: AGGGATCTTTGTCTCACCCAAGGGTGTGCTGGTACA...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTTTTAATTCAGGAGAGTaGGGCCCACAGAGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: PVELSAVMICSVSALCSSFNSGE*GPQSLV
Trigger: AACAAGACTCTGTGGGCCCAACTCTCCTGAATTAAA...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTCGTCGGGCAGGAATTaGCCGTTACAAATCCCAAAC +
Preference number: 5 (lower is better)
Translates to: FSKPLPTLALIYMELFNLSSGRN*PLQIPN
Trigger: GTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGTGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGGAGAAGAATGGTCAGGAAGGGAGACTGCCTCACTGTTGACCAATTCCAAAACCTAATATTAGACATCTaGCTTTCTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: WRRMVRKGDCLTVDQFQNLILDI*LSVCRH
Trigger: ATGCCTACAGACAGAAAGCAAGATGTCTAATATTAG...GTTTTGGAATTGGTCAACAGTGAGGCAGTCTCCCTTCCTGACCATTCTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GTGTTGTACCTGGTCAGAGAAAAACTTCCCATAAAGCAGCCCCTCTATAGGGACCTAATATTAGACATCTaGCTTTCTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: VLYLVREKLPIKQPLYRDLILDI*LSVCRH
Trigger: ATGCCTACAGACAGAAAGCAAGATGTCTAATATTAG...GTCCCTATAGAGGGGCTGCTTTATGGGAAGTTTTTCTCTGACCAGGTACAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp TGGTGGAGAAAGCTAAAGCTGGGGTCAGGGATCTTTAAAAGGCAAGCACATTTTAACCTTTGCCTACACTaGCTCTTATCTACATGGAGT +
Preference number: 5 (lower is better)
Translates to: WWRKLKLGSGIFKRQAHFNLCLH*LLSTWS
Trigger: ACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTT...AAAATGTGCTTGCCTTTTAAAGATCCCTGACCCCAGCTTTAGCTTTCTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GCCATGGTGCAATTGAACAGTAAAGCAGGGATAGGTGTAAAACGCTCAATGTGGCCATTTTCTAAACCTTaGCCTACACTTGCTCTTATC +
Preference number: 5 (lower is better)
Translates to: AMVQLNSKAGIGVKRSMWPFSKP*PTLALI
Trigger: GATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATGG...CCACATTGAGCGTTTTACACCTATCCCTGCTTTACTGTTCAATTGCACCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379152.7
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTTAACAAGGCCCATGACAATGATGGCAATGAGCGCTACGACCTTGGCGTAAGTCAATTGCATATTCTTTaGGGGAGGTTTGTCAATAAC +
Preference number: 5 (lower is better)
Translates to: FNKAHDNDGNERYDLGVSQLHIL*GRFVNN
Trigger: GTTATTGACAAACCTCCCCAAAAGAATATGCAATTG...ACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGCCTTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648130.1
CDS-3UTR CAA 90 bp AGGCCTTTCTCAGGGTCCCTCTTATTTAACAACTTAGCACAAATCAGAAGGAGCCCAGCAAAGCTTACATaGAACAGTAAAGCAGGGATA +
Preference number: 5 (lower is better)
Translates to: RPFSGSLLFNNLAQIRRSPAKLT*NSKAGI
Trigger: TATCCCTGCTTTACTGTTCAATGTAAGCTTTGCTGG...GCTCCTTCTGATTTGTGCTAAGTTGTTAAATAAGAGGGACCCTGAGAAAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567346.5
CDS-3UTR CAA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGTCGTCGGGCAGGAATTaGCCGTTACAAATCCCAAAC +
Preference number: 5 (lower is better)
Translates to: LLSKDFALQSGTKTDLSESSGRN*PLQIPN
Trigger: GTTTGGGATTTGTAACGGCAAATTCCTGCCCGACGA...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp GTATGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATGGCATGTGAGGTCCTaGCTTTCCCTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: VCLILDILLSVCRHRNKGWHVRS*LSLEAT
Trigger: AGTGGCTTCTAGGGAAAGCAAGGACCTCACATGCCA...TCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCTGTACAGTAGGACCCCTTaGCCTCAATCAAAAGTGACC +
Preference number: 5 (lower is better)
Translates to: FSKPLPTLALIYMELFNLYSRTP*PQSKVT
Trigger: GGTCACTTTTGATTGAGGCAAAGGGGTCCTACTGTA...CAGGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TGTCTAATATTAGACATCTTGCTTTCTGTCTGTAGGCATAGAAACAAAGGATTGTTTGTTCATCTGTCCTaGCTGGACCTGAGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: CLILDILLSVCRHRNKGLFVHLS*LDLSQV
Trigger: CACTTGGCTCAGGTCCAGCAAGGACAGATGAACAAA...CAATCCTTTGTTTCTATGCCTACAGACAGAAAGCAAGATGTCTAATATTAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATCCACGAAGAACAACCTaGATGAAGCAAAGATGGATG +
Preference number: 5 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYPRRTT*MKQRWM
Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGG...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGAGTGCCATGGTGCAATaGAACAGTAAAGCAGGGATA +
Preference number: 5 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRSAMVQ*NSKAGI
Trigger: TATCCCTGCTTTACTGTTCAATTGCACCATGGCACT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGATGTTCTCCAAGCCATaGACAGCTGAGAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRMFSKP*TAERIQ
Trigger: CTGAATTCTCTCAGCTGTCAATGGCTTGGAGAACAT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTGGCATCACAAAACAGTaGTACAATCCAATGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SSQHPPQKQTTINRINFIGITKQ*YNPMQP
Trigger: CGGCTGCATTGGATTGTACAACTGTTTTGTGATGCC...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTCTAATATTAGACATCTaGCTTTCTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: PVELSAVMICSVSALCSSLILDI*LSVCRH
Trigger: ATGCCTACAGACAGAAAGCAAGATGTCTAATATTAG...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CCAGTAGAACTATCTGCAGTGATGATATGTTCTGTGTCTGCACTGTGTAGTAGTCAATTGCATATTCTTTaGGGGAGGTTTGTCAATAAC +
Preference number: 5 (lower is better)
Translates to: PVELSAVMICSVSALCSSQLHIL*GRFVNN
Trigger: GTTATTGACAAACCTCCCCAAAAGAATATGCAATTG...ACTACTACACAGTGCAGACACAGAACATATCATCACTGCAGATAGTTCTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGAACCTTTGCCTACACTaGCTCTTATCTACATGGAGT +
Preference number: 5 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRNLCLH*LLSTWS
Trigger: ACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTT...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CTCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATCCATTTTCTAAACCTTaGCCTACACTTGCTCTTATC +
Preference number: 5 (lower is better)
Translates to: LFTAPTTKTNYYQQDQFYPFSKP*PTLALI
Trigger: GATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATGG...ATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp CATTTTCTAAACCTTTGCCTACACTTGCTCTTATCTACATGGAGTTGTTCAACCCAATTGCATATTCTTTaGGGGAGGTTTGTCAATAAC +
Preference number: 5 (lower is better)
Translates to: HFLNLCLHLLLSTWSCSTQLHIL*GRFVNN
Trigger: GTTATTGACAAACCTCCCCAAAAGAATATGCAATTG...GGTTGAACAACTCCATGTAGATAAGAGCAAGTGTAGGCAAAGGTTTAGAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp TCTTCACAGCACCCACCACAAAAACAAACTACTATCAACAGGATCAATTTTATTAATACAATCAGCCTATaGCATCCTGTAGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: SSQHPPQKQTTINRINFINTISL*HPVDEE
Trigger: CTCTTCATCTACAGGATGCAATAGGCTGATTGTATT...AATAAAATTGATCCTGTTGATAGTAGTTTGTTTTTGTGGTGGGTGCTGTGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATAAATACAATCAGCCTATaGCATCCTGTAGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLINTISL*HPVDEE
Trigger: CTCTTCATCTACAGGATGCAATAGGCTGATTGTATT...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219343.11
ENST00000566454.5
ENST00000618043.4
CDS-3UTR CAA 90 bp TTATTGAGCAAGGATTTTGCATTACAATCGGGAACAAAAACAGACCTTTCTGAGCACAGGCCGTATATATaGCAGCTAATTAAAACAACA +
Preference number: 5 (lower is better)
Translates to: LLSKDFALQSGTKTDLSEHRPYI*QLIKTT
Trigger: TGTTGTTTTAATTAGCTGCAATATATACGGCCTGTG...CTCAGAAAGGTCTGTTTTTGTTCCCGATTGTAATGCAAAATCCTTGCTCAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp AAAACAACAAACATCCTAGGCATGCACAAAGGTATAATTCACCGTTATAACAGGCACAGGCCGTATATATaGCAGCTAATTAAAACAACA +
Preference number: 5 (lower is better)
Translates to: KTTNILGMHKGIIHRYNRHRPYI*QLIKTT
Trigger: TGTTGTTTTAATTAGCTGCAATATATACGGCCTGTG...CCTGTTATAACGGTGAATTATACCTTTGTGCATGCCTAGGATGTTTGTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS-3UTR CAA 90 bp ATGCACAAAGGTATAATTCACCGTTATAACAGGCAGCAACTTGTATGTCTAATACACAGGCCGTATATATaGCAGCTAATTAAAACAACA +
Preference number: 5 (lower is better)
Translates to: MHKGIIHRYNRQQLVCLIHRPYI*QLIKTT
Trigger: TGTTGTTTTAATTAGCTGCAATATATACGGCCTGTG...TATTAGACATACAAGTTGCTGCCTGTTATAACGGTGAATTATACCTTTGTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000566454.5
ENST00000618043.4
ENST00000648130.1
CDS CCA 72 bp TCGCGCGGCCCCGATCGGCCAGCCCCGCGCTGTTTCTaGGCCGCATCCCGCTCCCGACGGCGGCAGCGAAGA +
Preference number: 6 (lower is better)
Translates to: SRGPDRPAPRCF*AASRSRRRQRR
Trigger: TCTTCGCTGCCGCCGTCGGGAGCGGGATGCGGCCCAGAAACAGCGCGGGGCTGGCCGATCGGGGCCGCGCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564708.1
ENST00000568088.5
CDS TCA 72 bp AGGTGGGTGTGGGCCTCCCAGGCTCCCTGGCTTCCATaGCAAACGGTTCCTGCACACCTGTGTTTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: RWVWASQAPWLP*QTVPAHLCLLW
Trigger: CCACAGCAAACACAGGTGTGCAGGAACCGTTTGTCATGGAAGCCAGGGAGCCTGGGAGGCCCACACCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000562727.1
ENST00000563080.1
ENST00000563146.1
ENST00000564708.1
ENST00000566454.5
ENST00000566834.5
ENST00000568024.1
ENST00000568088.5
ENST00000618043.4
ENST00000648130.1
CDS GCA 72 bp CAGCCCACCCTCTGGCCTAGACTCATGACCTCATCCTaGAGAGCTGAGGAGGGTGCAGTAAGACAGACTGAG +
Preference number: 6 (lower is better)
Translates to: QPTLWPRLMTSS*RAEEGAVRQTE
Trigger: CTCAGTCTGTCTTACTGCACCCTCCTCAGCTCTGCAGGATGAGGTCATGAGTCTAGGCCAGAGGGTGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562863.1
CDS TCA 72 bp AACAGAGAAGAGCCCACCAATGGCCCACACAATCAGTaGCATCCCATAGGAGGCAGTGTGTACCAGCACACC +
Preference number: 6 (lower is better)
Translates to: NREEPTNGPHNQ*HPIGGSVYQHT
Trigger: GGTGTGCTGGTACACACTGCCTCCTATGGGATGTCACTGATTGTGTGGGCCATTGGTGGGCTCTTCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000219343.11
ENST00000379152.7
ENST00000563080.1
ENST00000566454.5
ENST00000566579.5
ENST00000568024.1
ENST00000618043.4
ENST00000648130.1
CDS CCA 72 bp GGAACAAATGCAATCACTGCTAAGCAGCCCACCCTCTaGCCTAGACTCATGACCTCATCCTGCAGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: GTNAITAKQPTL*PRLMTSSCRAE
Trigger: CTCAGCTCTGCAGGATGAGGTCATGAGTCTAGGCCAGAGGGTGGGCTGCTTAGCAGTGATTGCATTTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562863.1
CDS CCA 72 bp CAGCTGAACATGCCAAACGTCTGGTCAGCAAATGTCTaGGGGCAGGGCACAGAAAAGGCACTTAAACGCACA +
Preference number: 6 (lower is better)
Translates to: QLNMPNVWSANV*GQGTEKALKRT
Trigger: TGTGCGTTTAAGTGCCTTTTCTGTGCCCTGCCCCCAGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562863.1
CDS TCA 72 bp AGCCTCCAAGTCTTTGAGGGAGGCTCACCTTCCCCTTaGCCCTGGGTTCTTTCTATTGAGAAAGACCCAACT +
Preference number: 6 (lower is better)
Translates to: SLQVFEGGSPSP*PWVLSIEKDPT
Trigger: AGTTGGGTCTTTCTCAATAGAAAGAACCCAGGGTCAAGGGGAAGGTGAGCCTCCCTCAAAGACTTGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563208.1
CDS TCA 72 bp CCAAAAGGCCTCACCGCCACCAAAAAGAGGTGGAACTaGTATAAGGAAGTACTCACAGCCTTTCAAGTCTGC +
Preference number: 6 (lower is better)
Translates to: PKGLTATKKRWN*YKEVLTAFQVC
Trigger: GCAGACTTGAAAGGCTGTGAGTACTTCCTTATATCAGTTCCACCTCTTTTTGGTGGCGGTGAGGCCTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562727.1
CDS CAA 90 bp CTCGGCCACATAAATTGCCAGGAAAATAAACTCCAGTGTAACGACTaGAATAACGATCTGAGATCAAAGTTGGGAAGCAAAAGCCGTCTG +
Preference number: 6 (lower is better)
Translates to: LGHINCQENKLQCND*NNDLRSKLGSKSRL
Trigger: CAGACGGCTTTTGCTTCCCAACTTTGATCTCAGATCGTTATTCAAGTCGTTACACTGGAGTTTATTTTCCTGGCAATTTATGTGGCCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562727.1
CDS CAA 72 bp ACAAGTGAGAAAGGACTACCTAGAACCAACCTCTCCTaGGGAACAAAGTTTATCAAGTCTCCACTGGGATTT +
Preference number: 6 (lower is better)
Translates to: TSEKGLPRTNLS*GTKFIKSPLGF
Trigger: AAATCCCAGTGGAGACTTGATAAACTTTGTTCCCAAGGAGAGGTTGGTTCTAGGTAGTCCTTTCTCACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563208.1