RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC7A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000099960

Ensembl transcript IDs: ENST00000382932.3, ENST00000403586.5, ENST00000426145.1

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTaGCCTCTCTGGCCTCCCAAGCAGGTGTGGGAGGGCGGGGCAAGT +
Preference number: 1 (lower is better)
Translates to: LQTQAAHNRRGSRLV*PLWPPKQVWEGGAS
Trigger: ACTTGCCCCGCCCTCCCACACCTGCTTGGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR GCA 90 bp GATGAAGGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTaGAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCT +
Preference number: 1 (lower is better)
Translates to: DEGPKVLRTPQPVQA*KPRLPTTEGALGLS
Trigger: AGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACCTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR GCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCGGACTCCCCAGCCTGTaGAGGCCTGCAAACCCAGGC +
Preference number: 2 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSGLPSL*RPANPG
Trigger: GCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCC...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR TCA 90 bp CTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACGCCAAGGCCCACTCCTaGAGACCCGAAGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LAKQLLLWIPWAVGLPIHAKAHS*RPEAQP
Trigger: GGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCTTGGC...GTGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR CCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACCTCCCAAGCAGGTGTaGGAGGGCGGGGCAAGTGTG +
Preference number: 2 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPPPKQV*EGGASV
Trigger: CACACTTGCCCCGCCCTCCCACACCTGCTTGGGAGG...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR CCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGGGCTCTCGGCTTGTCTaGCCTCTCTGGCCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGGSRLV*PLWPPK
Trigger: CTTGGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCC...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR CCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTCTTGTCTGGCCTCTCTaGCCTCCCAAGCAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSLVWPL*PPKQVW
Trigger: CCACACCTGCTTGGGAGGCCAGAGAGGCCAGACAAG...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR CCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCAGGCTCTCGGCTTGTCTaGCCTCTCTGGCCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPGSRLV*PLWPPK
Trigger: CTTGGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCC...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR TCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCAAGGTCCTAAGGTCCTaGGGACTCCCCAGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSKVLRS*GLPSLC
Trigger: GCACAGGCTGGGGAGTCCTCAGGACCTTAGGACCTT...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR GCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTCCTGCAAACCCAGGCTaGCCACAACAGAAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCPANPG*PQQKGL
Trigger: GAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR GCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCCTGCAAACCCAGGCTaGCCACAACAGAAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPPANPG*PQQKGL
Trigger: GAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR CCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCTTGTCTGGCCTCTCTaGCCTCCCAAGCAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPLVWPL*PPKQVW
Trigger: CCACACCTGCTTGGGAGGCCAGAGAGGCCAGACAAG...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR CCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCGAAGCCCAGCCCCTaGATGAAGGTCCTAAGGTCC +
Preference number: 2 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSPKPSP*MKVLRS
Trigger: GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGG...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR-3UTR CCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTCCGAAGCCCAGCCCCTaGATGAAGGTCCTAAGGTCC +
Preference number: 2 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCPKPSP*MKVLRS
Trigger: GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGG...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR GCA 72 bp GGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTaGCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: GLPSLCRPANPG*PQQKGLSACLA
Trigger: GGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR CCA 72 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTaGCCTCTCTGGCCTCCCAAGCAGGTGTGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: QAAHNRRGSRLV*PLWPPKQVWEG
Trigger: GCCCTCCCACACCTGCTTGGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR CCA 72 bp CACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTaGCCTCCCAAGCAGGTGTGGGAGGGCGGGGCAAGT +
Preference number: 3 (lower is better)
Translates to: HNRRGSRLVWPL*PPKQVWEGGAS
Trigger: ACTTGCCCCGCCCTCCCACACCTGCTTGGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR GCA 72 bp CCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTaGAAACCCAGGCTGCCCACAACAGAAGGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: PKVLRTPQPVQA*KPRLPTTEGAL
Trigger: GAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
3UTR CCA 72 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTaGGCTGTGGGCCTTCCCATCCACCCCACCACAACT +
Preference number: 3 (lower is better)
Translates to: TWLAKQLLLWIP*AVGLPIHPTTT
Trigger: AGTTGTGGTGGGGTGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCGTGCCAGGAAGGCCGTaGGGAGCCCGAACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPVPGRP*GARTPG
Trigger: CCCTGGCGTTCGGGCTCCTCACGGCCTTCCTGGCAC...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCGCCAAGGCCCACTCCTaGAGACCCGAAGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPAKAHS*RPEAQP
Trigger: GGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCTTGGC...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCTGGCCACGGCACCTGTaGGCACGTAGAGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPWPRHL*ARRDPS
Trigger: GCTCGGGTCTCTACGTGCTCACAGGTGCCGTGGCCA...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGAGGCAGTGCCGGCCATaGCGCCGGAGAAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLRQCRP*RRRSRR
Trigger: CCTTCGGCTTCTCCGGCGTCATGGCCGGCACTGCCT...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTGCCAAGGCCCACTCCTaGAGACCCGAAGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPAKAHS*RPEAQP
Trigger: GGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCTTGGC...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCCCAGCTACTGGAACCTaGTGCTGCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPPATGT*CCRSRC
Trigger: GCAGCGGCTGCGGCAGCAGCAGGTTCCAGTAGCTGG...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382932.3
CDS-3UTR CCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGCCGGGCCATGGCAGGTaGCCGAGAAGAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLPGHGR*PRRAPS
Trigger: GCTCGGTGCTCTTCTCGGCCACCTGCCATGGCCCGG...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTGACCGCCGTGGGTTCTaGGCCTCCTCACTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPDRRGF*ASSLEA
Trigger: CGCCTCCAGTGAGGAGGCCCAGAACCCACGGCGGTC...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCGTAGGGCCTCAGGGCTaGCTTCAGCTCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPVGPQG*LQLPWL
Trigger: GAGCCAGGGGAGCTGAAGCCAGCCCTGAGGCCCTAC...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCCCGAGAAGGTGTGATTaGGCCAGGAGGACACGCGGG +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPPRRCD*ARRTRG
Trigger: CCCGCGTGTCCTCCTGGCTCAATCACACCTTCTCGG...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTGGTAGGCAGAGCCCGTaGGTGGCACACGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPGRQSP*VAHVPQ
Trigger: TTGGGGCACGTGTGCCACGCACGGGCTCTGCCTACC...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTGGACTCCCCAGCCTGTaGAGGCCTGCAAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPGLPSL*RPANPG
Trigger: GCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCC...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCGACCGCCGTGGGTTCTaGGCCTCCTCACTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSDRRGF*ASSLEA
Trigger: CGCCTCCAGTGAGGAGGCCCAGAACCCACGGCGGTC...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCAGGCACAGACCGCCGTaGGTTCTGGGCCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPRHRPP*VLGLLT
Trigger: AGTGAGGAGGCCCAGAACCCACGGCGGTCTGTGCCT...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCCAAGCGAGATGGCGATaGCCAGAGGCACAGACCGCC +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPQARWR*PEAQTA
Trigger: GGCGGTCTGTGCCTCTGGCCATCGCCATCTCGCTTG...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGAGGAGCTCTGCTGCTTaGTCAGGGGGCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLRSSAA*SGGQGW
Trigger: CCAGCCCTGGCCCCCTGACCAAGCAGCAGAGCTCCT...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGTGGCTTCAGCTCCCCTaGCTCAGGGACGGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLWLQLP*LRDGGV
Trigger: CACGCCTCCGTCCCTGAGCCAGGGGAGCTGAAGCCA...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCTCCCAAGCAGGTGTaGGAGGGCGGGGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPPPKQV*EGGASV
Trigger: CACACTTGCCCCGCCCTCCCACACCTGCTTGGGAGG...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCGGCTCTCGGCTTGTCTaGCCTCTCTGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPGSRLV*PLWPPK
Trigger: CTTGGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCC...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCAGGCAGCGCCGCAGTaGCGTCTCCATGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASQAAPQ*RLHGGV
Trigger: GACTCCACCATGGAGACGTCACTGCGGCGCTGCCTG...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCGGCATCTGCAAGCGCTaGGTCGGGGTCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LQTQAAHNRRGSRLVWPLGICKR*VGVQAV
Trigger: CACAGCCTGGACCCCGACTCAGCGCTTGCAGATGCC...GAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTAGCCAGCTGCCACGATaGAGCCAGCCCACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPSQLPR*SQPTCS
Trigger: GCTACAGGTGGGCTGGCTTCATCGTGGCAGCTGGCT...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCCCAAGGGACAGGAACTaGACCAGCGACTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPPRDRN*TSDSRS
Trigger: GGACCTGGAGTCGCTGGTTCAGTTCCTGTCCCTTGG...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCCCAGCTACTGGAACCTaGTGCTGCTGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSPATGT*CCCRSR
Trigger: GCGGCTGCGGCAGCAGCAGCAGGTTCCAGTAGCTGG...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403586.5
CDS-3UTR CCA 90 bp CTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCGAGTCAGGTCCAGCGTaGACAGGCAGCGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LQTQAAHNRRGSRLVWPLESGPA*TGSAAV
Trigger: CACTGCGGCGCTGCCTGTCCACGCTGGACCTGACTC...GAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTTGGCTTCAGCTCCCCTaGCTCAGGGACGGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASWLQLP*LRDGGV
Trigger: CACGCCTCCGTCCCTGAGCCAGGGGAGCTGAAGCCA...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCCTTGTCTGGCCTCTCTaGCCTCCCAAGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPLVWPL*PPKQVW
Trigger: CCACACCTGCTTGGGAGGCCAGAGAGGCCAGACAAG...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTGAACATTCCAGCCGATaGGGAAGGCCCACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPEHSSR*GRPTAR
Trigger: GCGAGCTGTGGGCCTTCCTCATCGGCTGGAATGTTC...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGCCACGTGGGTCTCAGTaGAGTTGCGGATGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLPRGSQ*SCGCCG
Trigger: GCCACAGCATCCGCAACTTCACTGAGACCCACGTGG...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCAGCCAGCTGCCACGATaGAGCCAGCCCACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LQTQAAHNRRGSRLVWPLSQLPR*SQPTCS
Trigger: GCTACAGGTGGGCTGGCTTCATCGTGGCAGCTGGCT...GAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCGATACTGTTGCTGGTaGGCCCCCAGGACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPRYCCW*APRTRR
Trigger: CCTCCTTGTCCTGGGGGCTCACCAGCAACAGTATCG...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTCCCAGGAGGGGCACCTaGCAAGAACCCACGTGGGTC +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSPRRGT*QEPTWV
Trigger: GACCCACGTGGGTTCTTGGCAGGTGCCCCTCCTGGG...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGCGCCCAAGTCACCACTaGTCCAGGGCTGTACCCATC +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLRPSHH*SRAVPI
Trigger: GATGGGTACAGCCCTGGAGCAGTGGTGACTTGGGCG...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCCACCGAGCCAGCTACTaGAACCTGCTGCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSHRASY*NLLLPQ
Trigger: CTGCGGCAGCAGCAGGTTCCAGTAGCTGGCTCGGTG...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382932.3
CDS-3UTR CCA 90 bp CTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCAGGCACAGACCGCCGTaGGTTCTGGGCCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LQTQAAHNRRGSRLVWPLRHRPP*VLGLLT
Trigger: AGTGAGGAGGCCCAGAACCCACGGCGGTCTGTGCCT...GAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCCCCAATGGCAAGCGAGATaGCGATGGCCAGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: QAAHNRRGSRLVWPLWPPQWQAR*RWPEAQ
Trigger: CTGTGCCTCTGGCCATCGCCATCTCGCTTGCCATTG...GGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTCTGGGCCTGGGGAGCTaGGCGGGGAAGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSLGLGS*AGKTSG
Trigger: TCCAGAAGTCTTCCCCGCCCAGCTCCCCAGGCCCAG...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCGGCGGCGCCACCGATaGTGTATTCGAGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPRRRHR*CIRGEH
Trigger: ATGTTCTCCTCGAATACATCATCGGTGGCGCCGCCG...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTTCAGCGCTCCAGTTGTaGGGCTGGGCCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASSALQL*GWARMK
Trigger: CTTCATCCTGGCCCAGCCTCACAACTGGAGCGCTGA...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTGGGAGAAGAGGAGGCTaGGCAGGACGGTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASGRRGG*AGRCSW
Trigger: CCATGAACACCGTCCTGCTCAGCCTCCTCTTCTCCC...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTAAGGTCCTAAGGTCCTaGGGACTCCCCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASKVLRS*GLPSLC
Trigger: GCACAGGCTGGGGAGTCCTCAGGACCTTAGGACCTT...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTCAATGGCAAGCGAGATaGCGATGGCCAGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPQWQAR*RWPEAQ
Trigger: CTGTGCCTCTGGCCATCGCCATCTCGCTTGCCATTG...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGAGGCACCAGCTGCAATaGCAAGCGAGATGGCGATGG +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLRHQLQ*QARWRW
Trigger: CCATCGCCATCTCGCTTGCCATTGCAGCTGGTGCCT...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTGTCCGGGGGTGCACATaGGCAAACACCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPVRGCT*ANTWKK
Trigger: CTTCTTCCAGGTGTTTGCCCATGTGCACCCCCGGAC...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGAGGGCGGGGCAAGTGTaGGCTGATCAGCTACTCCAT +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLRAGQV*ADQLLH
Trigger: ATGGAGTAGCTGATCAGCCCACACTTGCCCCGCCCT...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCCGAAGCCCAGCCCCTaGATGAAGGTCCTAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASPKPSP*MKVLRS
Trigger: GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGG...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTCACCGAGCCAGCTACTaGAACCTGCTGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSHRASY*NLLLLP
Trigger: CGGCAGCAGCAGCAGGTTCCAGTAGCTGGCTCGGTG...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403586.5
CDS-3UTR TCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCCGGCGGCGCCACCGATaGTGTATTCGAGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSRRRHR*CIRGEH
Trigger: ATGTTCTCCTCGAATACATCATCGGTGGCGCCGCCG...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCATGGCCGAGAAGGTGTaGTTGAGCCAGGAGGACACG +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSMAEKV*LSQEDT
Trigger: CGTGTCCTCCTGGCTCAATCACACCTTCTCGGCCAT...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGTGCCAGGAAGGCCGTaGGGAGCCCGAACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSVPGRP*GARTPG
Trigger: CCCTGGCGTTCGGGCTCCTCACGGCCTTCCTGGCAC...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTAAGGTCCTAAGGTCCTaGGGACTCCCCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSKVLRS*GLPSLC
Trigger: GCACAGGCTGGGGAGTCCTCAGGACCTTAGGACCTT...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGCAGATGGAGCCAGCTaGCACGATGAAGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSADGAS*HDEASP
Trigger: TGGGCTGGCTTCATCGTGGCAGCTGGCTCCATCTGC...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTACCTGTGTCCGGGGGTaGACATGGGCAAACACCTGG +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSTCVRG*TWANTW
Trigger: CCAGGTGTTTGCCCATGTGCACCCCCGGACACAGGT...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp ACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGGGCAGAGTCCAGCCCGAACGCCAGGGTaGCCGCCACAGGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TAQVAGADHKQEGSGQSPARTPG*PPQAPV
Trigger: CACAGGTGCCTGTGGCGGGCACCCTGGCGTTCGGGC...TGGACTCTGCCCAGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGGCCCGAACGCCAGGGTaGCCGCCACAGGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGARTPG*PPQAPV
Trigger: CACAGGTGCCTGTGGCGGGCACCCTGGCGTTCGGGC...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCCCCGCTGGTTCTCCTTaGTATGCCGGATGCCATAGC +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSPAGSP*YAGCHS
Trigger: GCTATGGCATCCGGCATAGCAAGGAGAACCAGCGGG...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTCCTGCAAACCCAGGCTaGCCACAACAGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSPANPG*PQQKGL
Trigger: GAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTGCAGCCCCCGGGCCATaGCAGGTGGCCGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GHMAGQAIIIMDPLGCGPAAPGP*QVAEKS
Trigger: GCTCTTCTCGGCCACCTGCCATGGCCCGGGGGCTGC...AGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTGGCCTACATGGGCAAACACCTaGAAGAAGAGCCCATCGGCG +
Preference number: 4 (lower is better)
Translates to: TQAAHNRRGSRLVWPLWPTWANT*KKSPSA
Trigger: CGCCGATGGGCTCTTCTTCCAGGTGTTTGCCCATGT...AGGCCAGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCCCACCAGCTGTAGGTaGTCTGAGAAGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASPTSCR*SEKELC
Trigger: GCAGAGCTCCTTCTCAGACCACCTACAGCTGGTGGG...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCGACGATGCTCAGGGCTaGAATCAGGGGAACCATGGG +
Preference number: 4 (lower is better)
Translates to: LQTQAAHNRRGSRLVWPLDDAQG*NQGNHG
Trigger: CCCATGGTTCCCCTGATTCCAGCCCTGAGCATCGTC...GAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTGATGTAGGCACCAGCTaGAATGGCAAGCGAGATGGC +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASDVGTS*NGKRDG
Trigger: GCCATCTCGCTTGCCATTGCAGCTGGTGCCTACATC...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTTCTGAGAAGGAGCTCTaGTGCTTGGTCAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSSEKEL*CLVRGP
Trigger: TGGCCCCCTGACCAAGCAGCAGAGCTCCTTCTCAGA...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGCAGCCCCCGGGCCATaGCAGGTGGCCGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCAAPGP*QVAEKS
Trigger: GCTCTTCTCGGCCACCTGCCATGGCCCGGGGGCTGC...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCTGCCAAGAACCCACGTaGGTCTCAGTGAAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSCQEPT*VSVKLR
Trigger: CCGCAACTTCACTGAGACCCACGTGGGTTCTTGGCA...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGGGCGGGGAAGACTTCTaGAAGCGCAGCACAATGATA +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLGGEDF*KRSTMI
Trigger: TATCATTGTGCTGCGCTTCCAGAAGTCTTCCCCGCC...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGGGCAGAGTCCATGGCCACGGCACCTGTaGGCACGTAGAGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: TAQVAGADHKQEGSGQSPWPRHL*ARRDPS
Trigger: GCTCGGGTCTCTACGTGCTCACAGGTGCCGTGGCCA...TGGACTCTGCCCAGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTAGGCAGTGCCGGCCATaGCGCCGGAGAAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCRQCRP*RRRSRR
Trigger: CCTTCGGCTTCTCCGGCGTCATGGCCGGCACTGCCT...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCAACTGGAACCTGCTGCTaGCGCAGCCGCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPTGTCC*RSRCLR
Trigger: GCGGAGGCAGCGGCTGCGGCAGCAGCAGGTTCCAGT...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382932.3
CDS-3UTR GCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGACCCGAGCCCACCATaGCACCCACGCCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSDPSPP*HPRPEE
Trigger: CTCTTCTGGGCGTGGGTGGCATGGTGGGCTCGGGTC...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp ACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGGGCAGAGTCCACCCAGGAGGGGCACCTaGCAAGAACCCACGTGGGTC +
Preference number: 4 (lower is better)
Translates to: TAQVAGADHKQEGSGQSPPRRGT*QEPTWV
Trigger: GACCCACGTGGGTTCTTGGCAGGTGCCCCTCCTGGG...TGGACTCTGCCCAGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCCGGGCCATGGCAGGTaGCCGAGAAGAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPPGHGR*PRRAPS
Trigger: GCTCGGTGCTCTTCTCGGCCACCTGCCATGGCCCGG...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGAAGTTGCGGATGCTGTaGCTGAACATAGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLKLRML*LNIESR
Trigger: CCTGGACTCTATGTTCAGCCACAGCATCCGCAACTT...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp TGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTTGCCAAGAACCCACGTaGGTCTCAGTGAAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: CKPRLPTTEGALGLSGLSCQEPT*VSVKLR
Trigger: CCGCAACTTCACTGAGACCCACGTGGGTTCTTGGCA...AGAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTAGGAGCTCTGCTGCTTaGTCAGGGGGCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHMAGQAIIIMDPLGCGPRSSAA*SGGQGW
Trigger: CCAGCCCTGGCCCCCTGACCAAGCAGCAGAGCTCCT...AGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTATCAGCTACTCCATATaGCCAGGGTCCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASISYSI*PGSCAG
Trigger: ACCAGCACAGGACCCTGGCCATATGGAGTAGCTGAT...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCGAGAAGGTGTGATTaGGCCAGGAGGACACGCGGG +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGPRRCD*ARRTRG
Trigger: CCCGCGTGTCCTCCTGGCTCAATCACACCTTCTCGG...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCAGGCATCTGCAAGCGCTaGGTCGGGGTCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPGICKR*VGVQAV
Trigger: CACAGCCTGGACCCCGACTCAGCGCTTGCAGATGCC...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCAGACCCGAGCCCACCATaGCACCCACGCCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPDPSPP*HPRPEE
Trigger: CTCTTCTGGGCGTGGGTGGCATGGTGGGCTCGGGTC...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGTAGGCAGAGCCCGTaGGTGGCACACGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCGRQSP*VAHVPQ
Trigger: TTGGGGCACGTGTGCCACGCACGGGCTCTGCCTACC...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGTCGGGGTCCAGGCTGTaGCAGGGCACCATGAGGGTT +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGSGSRL*QGTMRV
Trigger: AACCCTCATGGTGCCCTGGCACAGCCTGGACCCCGA...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTTCGGGGTCCAGGCTGTaGCAGGGCACCATGAGGGTT +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSSGSRL*QGTMRV
Trigger: AACCCTCATGGTGCCCTGGCACAGCCTGGACCCCGA...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCCCTTGCTATGCCGGATaGCATAGCCGAAATACACTG +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSPCYAG*HSRNTL
Trigger: CAGTGTATTTCGGCTATGGCATCCGGCATAGCAAGG...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCGGACTCCCCAGCCTGTaGAGGCCTGCAAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPGLPSL*RPANPG
Trigger: GCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCC...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCAAGTTGCGGATGCTGTaGCTGAACATAGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQTQAAHNRRGSRLVWPLKLRML*LNIESR
Trigger: CCTGGACTCTATGTTCAGCCACAGCATCCGCAACTT...GAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCTGGGCCTGGGGAGCTaGGCGGGGAAGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPLGLGS*AGKTSG
Trigger: TCCAGAAGTCTTCCCCGCCCAGCTCCCCAGGCCCAG...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGTAGGGCCTCAGGGCTaGCTTCAGCTCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCVGPQG*LQLPWL
Trigger: GAGCCAGGGGAGCTGAAGCCAGCCCTGAGGCCCTAC...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACCCTCCCAAGCAGGTGTaGGAGGGCGGGGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LAKQLLLWIPWAVGLPIHPPKQV*EGGASV
Trigger: CACACTTGCCCCGCCCTCCCACACCTGCTTGGGAGG...GTGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTCTTATTATGGATCCCTTaGGCTGTGGGCCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: LQTQAAHNRRGSRLVWPLLLWIP*AVGLPI
Trigger: GATGGGAAGGCCCACAGCCCAAGGGATCCATAATAA...GAGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTTTATTATGGATCCCTTaGGCTGTGGGCCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASLLWIP*AVGLPI
Trigger: GATGGGAAGGCCCACAGCCCAAGGGATCCATAATAA...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTCCACGTGGGTCTCAGTaGAGTTGCGGATGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSPRGSQ*SCGCCG
Trigger: GCCACAGCATCCGCAACTTCACTGAGACCCACGTGG...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTTCAGCGCTCCAGTTGTaGGGCTGGGCCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSSALQL*GWARMK
Trigger: CTTCATCCTGGCCCAGCCTCACAACTGGAGCGCTGA...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTCACTGGAGGCGGCAATaGCGTCGAAGCCCACGAAAG +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSHWRRQ*RRSPRK
Trigger: CTTTCGTGGGCTTCGACGTCATTGCCGCCTCCAGTG...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp GGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTGTGCCAGGGCACCATaGGGGTTAGCACGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GHMAGQAIIIMDPLGCGPCARAP*GLARWR
Trigger: TCTCCACCGTGCTAACCCTCATGGTGCCCTGGCACA...AGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGGGGAGAAGAGGAGGCTaGGCAGGACGGTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGGRRGG*AGRCSW
Trigger: CCATGAACACCGTCCTGCTCAGCCTCCTCTTCTCCC...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTGGAGAAGCCGAAGGGTaGAAAGCCGCCTTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GHMAGQAIIIMDPLGCGPGEAEG*KAAFVS
Trigger: GCTGACGAAGGCGGCTTTGCACCCTTCGGCTTCTCC...AGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGCAGATGGAGCCAGCTaGCACGATGAAGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSADGAS*HDEASP
Trigger: TGGGCTGGCTTCATCGTGGCAGCTGGCTCCATCTGC...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTACCTGTGTCCGGGGGTaGACATGGGCAAACACCTGG +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSTCVRG*TWANTW
Trigger: CCAGGTGTTTGCCCATGTGCACCCCCGGACACAGGT...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCGGAGGCGTGTACAGTaGCCACCAGCTGTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGRRRVQ*PPAVGG
Trigger: ACCACCTACAGCTGGTGGGCACTGTACACGCCTCCG...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CCTGCAAACCCAGGCTGCCCACAACAGAAGGGGCTCTCGGCTTGTCTGGCCTCTATAGCCGAAATACACTaGAAGTCCCATCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PANPGCPQQKGLSACLASIAEIH*KSHQQP
Trigger: TGGCTGCTGATGGGACTTGCAGTGTATTTCGGCTAT...AGAGGCCAGACAAGCCGAGAGCCCCTTCTGTTGTGGGCAGCCTGGGTTTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCTGTCTCCTCCAGGCTaGCCCTGGGGAATACCACGT +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGLSPPG*PWGIPR
Trigger: ACGTGGTATTCCCCAGGGGCAGCCTGGAGGAGACAG...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTCTGTCTCCTCCAGGCTaGCCCTGGGGAATACCACGT +
Preference number: 4 (lower is better)
Translates to: GHMAGQAIIIMDPLGCGPLSPPG*PWGIPR
Trigger: ACGTGGTATTCCCCAGGGGCAGCCTGGAGGAGACAG...AGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGCAGTGACGTCTCCATaGTGGAGTCCTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSAVTSP*WSPPAA
Trigger: AGCCGCTGGAGGACTCCACCATGGAGACGTCACTGC...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGCAGAGCCCGTGCGTaGCACACGTGCCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCGRARA*HTCPKF
Trigger: GAATTTGGGGCACGTGTGCCACGCACGGGCTCTGCC...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCGGCAGAGCCCGTGCGTaGCACACGTGCCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSGRARA*HTCPKF
Trigger: GAATTTGGGGCACGTGTGCCACGCACGGGCTCTGCC...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTCAAGCGAGATGGCGATaGCCAGAGGCACAGACCGCC +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCQARWR*PEAQTA
Trigger: GGCGGTCTGTGCCTCTGGCCATCGCCATCTCGCTTG...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGGCCCATCGGCGGCCATaGCATAGACAATGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGAHRRP*HRQCVA
Trigger: TGCCACGCATTGTCTATGCCATGGCCGCCGATGGGC...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCGGCTCTCGGCTTGTCTaGCCTCTCTGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSGSRLV*PLWPPK
Trigger: CTTGGGAGGCCAGAGAGGCCAGACAAGCCGAGAGCC...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCGAACATTCCAGCCGATaGGGAAGGCCCACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPEHSSR*GRPTAR
Trigger: GCGAGCTGTGGGCCTTCCTCATCGGCTGGAATGTTC...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGGGCAGAGTCCAATGGCCGAGAAGGTGTaGTTGAGCCAGGAGGACACG +
Preference number: 4 (lower is better)
Translates to: TAQVAGADHKQEGSGQSPMAEKV*LSQEDT
Trigger: CGTGTCCTCCTGGCTCAATCACACCTTCTCGGCCAT...TGGACTCTGCCCAGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACCACTGGAGGCGGCAATaGCGTCGAAGCCCACGAAAG +
Preference number: 4 (lower is better)
Translates to: LAKQLLLWIPWAVGLPIHHWRRQ*RRSPRK
Trigger: CTTTCGTGGGCTTCGACGTCATTGCCGCCTCCAGTG...GTGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCTGTGCCAGGGCACCATaGGGGTTAGCACGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPCARAP*GLARWR
Trigger: TCTCCACCGTGCTAACCCTCATGGTGCCCTGGCACA...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCAAGGGACAGGAACTaGACCAGCGACTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSPRDRN*TSDSRS
Trigger: GGACCTGGAGTCGCTGGTTCAGTTCCTGTCCCTTGG...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCGATACTGTTGCTGGTaGGCCCCCAGGACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSRYCCW*APRTRR
Trigger: CCTCCTTGTCCTGGGGGCTCACCAGCAACAGTATCG...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCGGAGAAGCCGAAGGGTaGAAAGCCGCCTTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPGEAEG*KAAFVS
Trigger: GCTGACGAAGGCGGCTTTGCACCCTTCGGCTTCTCC...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCGGAGGCGTGTACAGTaGCCACCAGCTGTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSRRRVQ*PPAVGG
Trigger: ACCACCTACAGCTGGTGGGCACTGTACACGCCTCCG...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCGCCCAAGTCACCACTaGTCCAGGGCTGTACCCATC +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSRPSHH*SRAVPI
Trigger: GATGGGTACAGCCCTGGAGCAGTGGTGACTTGGGCG...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCCCAGTGTGGGAGGTaGAGGGTCGAGTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSPQCGR*RVEFPK
Trigger: CTTTGGGAACTCGACCCTGCACCTCCCACACTGGGG...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACCCCAGTGTGGGAGGTaGAGGGTCGAGTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPPQCGR*RVEFPK
Trigger: CTTTGGGAACTCGACCCTGCACCTCCCACACTGGGG...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp ACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGGGCAGAGTCCACCCGCTGGTTCTCCTTaGTATGCCGGATGCCATAGC +
Preference number: 4 (lower is better)
Translates to: TAQVAGADHKQEGSGQSPPAGSP*YAGCHS
Trigger: GCTATGGCATCCGGCATAGCAAGGAGAACCAGCGGG...TGGACTCTGCCCAGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGTGACGTCTCCATGGTaGAGTCCTCCAGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSVTSPW*SPPAAS
Trigger: TGAAGCCGCTGGAGGACTCCACCATGGAGACGTCAC...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGCAGTGACGTCTCCATaGTGGAGTCCTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCAVTSP*WSPPAA
Trigger: AGCCGCTGGAGGACTCCACCATGGAGACGTCACTGC...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTAGGCACCAGCTGCAATaGCAAGCGAGATGGCGATGG +
Preference number: 4 (lower is better)
Translates to: GHMAGQAIIIMDPLGCGPRHQLQ*QARWRW
Trigger: CCATCGCCATCTCGCTTGCCATTGCAGCTGGTGCCT...AGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGCCCATCGGCGGCCATaGCATAGACAATGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCAHRRP*HRQCVA
Trigger: TGCCACGCATTGTCTATGCCATGGCCGCCGATGGGC...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGGGCAGAGTCCAGTCCGGGGGTGCACATaGGCAAACACCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TAQVAGADHKQEGSGQSPVRGCT*ANTWKK
Trigger: CTTCTTCCAGGTGTTTGCCCATGTGCACCCCCGGAC...TGGACTCTGCCCAGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCCGAAGCCCAGCCCCTaGATGAAGGTCCTAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPPKPSP*MKVLRS
Trigger: GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGG...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGGCCTATGGTGATGGCTaGGGCCAACATAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGAYGDG*GQHNAK
Trigger: CTTGGCGTTATGTTGGCCTCAGCCATCACCATAGGC...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGGCAAGTGTGGGCTaGTCAGCTACTCCATATGGC +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCGASVG*SATPYG
Trigger: GCCATATGGAGTAGCTGATCAGCCCACACTTGCCCC...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp CTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACGGGGCAAGTGTGGGCTaGTCAGCTACTCCATATGGC +
Preference number: 4 (lower is better)
Translates to: LAKQLLLWIPWAVGLPIHGASVG*SATPYG
Trigger: GCCATATGGAGTAGCTGATCAGCCCACACTTGCCCC...GTGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCGTGCGTGGCACACGTaGCCCAAATTCTGCATAGCA +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGRAWHT*PKFCIA
Trigger: TGCTATGCAGAATTTGGGGCACGTGTGCCACGCACG...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGATGTAGGCACCAGCTaGAATGGCAAGCGAGATGGC +
Preference number: 4 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSDVGTS*NGKRDG
Trigger: GCCATCTCGCTTGCCATTGCAGCTGGTGCCTACATC...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACTCTGAGAAGGAGCTCTaGTGCTTGGTCAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LAKQLLLWIPWAVGLPIHSEKEL*CLVRGP
Trigger: TGGCCCCCTGACCAAGCAGCAGAGCTCCTTCTCAGA...GTGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCAGTGACGTCTCCATGGTaGAGTCCTCCAGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPVTSPW*SPPAAS
Trigger: TGAAGCCGCTGGAGGACTCCACCATGGAGACGTCAC...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCCACCAGCTGTAGGTaGTCTGAGAAGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSPTSCR*SEKELC
Trigger: GCAGAGCTCCTTCTCAGACCACCTACAGCTGGTGGG...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCAGACGATGCTCAGGGCTaGAATCAGGGGAACCATGGG +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPDDAQG*NQGNHG
Trigger: CCCATGGTTCCCCTGATTCCAGCCCTGAGCATCGTC...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCAGGGCGGGGCAAGTGTaGGCTGATCAGCTACTCCAT +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPRAGQV*ADQLLH
Trigger: ATGGAGTAGCTGATCAGCCCACACTTGCCCCGCCCT...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp AGGCCCACTCCTGAAGACCCGAAGCCCAGCCCCTGGATGAAGGTCCTAAGGTCCAAGCAATTATTATTATaGATCCCTTGGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPTPEDPKPSPWMKVLRSKQLLL*IPWAVG
Trigger: GCCCACAGCCCAAGGGATCCATAATAATAATTGCTT...GGACCTTAGGACCTTCATCCAGGGGCTGGGCTTCGGGTCTTCAGGAGTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR TCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCAGCCTATGGTGATGGCTaGGGCCAACATAACGCCAAG +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPAYGDG*GQHNAK
Trigger: CTTGGCGTTATGTTGGCCTCAGCCATCACCATAGGC...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTACATGGGCAAACACCTaGAAGAAGAGCCCATCGGCG +
Preference number: 4 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCTWANT*KKSPSA
Trigger: CGCCGATGGGCTCTTCTTCCAGGTGTTTGCCCATGT...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCGATGTAACCCCAGTGTaGGAGGTGCAGGGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSDVTPV*EVQGRV
Trigger: AACTCGACCCTGCACCTCCCACACTGGGGTTACATC...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCGATGTAACCCCAGTGTaGGAGGTGCAGGGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPDVTPV*EVQGRV
Trigger: AACTCGACCCTGCACCTCCCACACTGGGGTTACATC...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGGGCAGAGTCCAATCAGCTACTCCATATaGCCAGGGTCCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TAQVAGADHKQEGSGQSPISYSI*PGSCAG
Trigger: ACCAGCACAGGACCCTGGCCATATGGAGTAGCTGAT...TGGACTCTGCCCAGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCAGGCGGGGAAGACTTCTaGAAGCGCAGCACAATGATA +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPGGEDF*KRSTMI
Trigger: TATCATTGTGCTGCGCTTCCAGAAGTCTTCCCCGCC...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp ACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCGCCAGCAGGCCACATaGCTGGCCAAGCAATTATTA +
Preference number: 4 (lower is better)
Translates to: TWLAKQLLLWIPWAVGLPRQQAT*LAKQLL
Trigger: TAATAATTGCTTGGCCAGCCATGTGGCCTGCTGGCG...GGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACGCCAGCAGGCCACATaGCTGGCCAAGCAATTATTA +
Preference number: 4 (lower is better)
Translates to: AGQAIIIMDPLGCGPSHPRQQAT*LAKQLL
Trigger: TAATAATTGCTTGGCCAGCCATGTGGCCTGCTGGCG...TGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGATAGCCGAAATACACTaGAAGTCCCATCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGIAEIH*KSHQQP
Trigger: TGGCTGCTGATGGGACTTGCAGTGTATTTCGGCTAT...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR GCA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCCTTGCTATGCCGGATaGCATAGCCGAAATACACTG +
Preference number: 4 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSPCYAG*HSRNTL
Trigger: CAGTGTATTTCGGCTATGGCATCCGGCATAGCAAGG...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp GCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGAGCAGGCCACATGGCTaGCCAAGCAATTATTATTAT +
Preference number: 4 (lower is better)
Translates to: AGHMAGQAIIIMDPLGCGSRPHG*PSNYYY
Trigger: ATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCT...CCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACAAGCAATTATTATTATaGATCCCTTGGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LAKQLLLWIPWAVGLPIHKQLLL*IPWAVG
Trigger: GCCCACAGCCCAAGGGATCCATAATAATAATTGCTT...GTGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CCA 90 bp CTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCCATCCACAGCAGGCCACATGGCTaGCCAAGCAATTATTATTAT +
Preference number: 4 (lower is better)
Translates to: LAKQLLLWIPWAVGLPIHSRPHG*PSNYYY
Trigger: ATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCT...GTGGATGGGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 90 bp ACTGAACCAGCGACTCCAGGTCCAGCAGCAGTGCCAGGAAGGCCGTaGGGAGCCCGAACGCCAGGGTGCCCGCCACAGGCACCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: TEPATPGPAAVPGRP*GARTPGCPPQAPVS
Trigger: GGACACAGGTGCCTGTGGCGGGCACCCTGGCGTTCGGGCTCCTCACGGCCTTCCTGGCACTGCTGCTGGACCTGGAGTCGCTGGTTCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS GCA 90 bp AGCCCGAACGCCAGGGTGCCCGCCACAGGCACCTGTGTCCGGGGGTaGACATGGGCAAACACCTGGAAGAAGAGCCCATCGGCGGCCATG +
Preference number: 5 (lower is better)
Translates to: SPNARVPATGTCVRG*TWANTWKKSPSAAM
Trigger: CATGGCCGCCGATGGGCTCTTCTTCCAGGTGTTTGCCCATGTGCACCCCCGGACACAGGTGCCTGTGGCGGGCACCCTGGCGTTCGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS GCA 90 bp GAAGCAGGAGGCAGTGCCGGCCATGACGCCGGAGAAGCCGAAGGGTaGAAAGCCGCCTTCGTCAGCGCTCCAGTTGTGAGGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: EAGGSAGHDAGEAEG*KAAFVSAPVVRLGQ
Trigger: CTGGCCCAGCCTCACAACTGGAGCGCTGACGAAGGCGGCTTTGCACCCTTCGGCTTCTCCGGCGTCATGGCCGGCACTGCCTCCTGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 90 bp CACGCCCAGAAGAGTCAGGTCCAGCGTGGACAGGCAGCGCCGCAGTaGCGTCTCCATGGTGGAGTCCTCCAGCGGCTTCAGGCGGTTCAG +
Preference number: 5 (lower is better)
Translates to: HAQKSQVQRGQAAPQ*RLHGGVLQRLQAVQ
Trigger: CTGAACCGCCTGAAGCCGCTGGAGGACTCCACCATGGAGACGTCACTGCGGCGCTGCCTGTCCACGCTGGACCTGACTCTTCTGGGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382932.3
ENST00000403586.5
ENST00000426145.1
CDS TCA 90 bp ACAAGAGCACAGCAGGGCCAGCCACCTCCTTGGCCACGGCACCTGTaGGCACGTAGAGACCCGAGCCCACCATGCCACCCACGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: TRAQQGQPPPWPRHL*ARRDPSPPCHPRPE
Trigger: TTCTGGGCGTGGGTGGCATGGTGGGCTCGGGTCTCTACGTGCTCACAGGTGCCGTGGCCAAGGAGGTGGCTGGCCCTGCTGTGCTCTTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382932.3
ENST00000403586.5
ENST00000426145.1
CDS TCA 90 bp CTCTGGCCTCCCAAGCAGGTGTGGGAGGGCGGGGCAAGTGTGGGCTaGTCAGCTACTCCATATGGCCAGGGTCCTGTGCTGGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LWPPKQVWEGGASVG*SATPYGQGPVLVPG
Trigger: GCCAGGCACCAGCACAGGACCCTGGCCATATGGAGTAGCTGATCAGCCCACACTTGCCCCGCCCTCCCACACCTGCTTGGGAGGCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 90 bp CGGCGGCCATGGCATAGACAATGCGTGGCAGGGAGAAGAGGAGGCTaGGCAGGACGGTGTTCATGGCGCAGATGGAGCCAGCTGCCACGA +
Preference number: 5 (lower is better)
Translates to: RRPWHRQCVAGRRGG*AGRCSWRRWSQLPR
Trigger: TCGTGGCAGCTGGCTCCATCTGCGCCATGAACACCGTCCTGCTCAGCCTCCTCTTCTCCCTGCCACGCATTGTCTATGCCATGGCCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 90 bp GGCCTGGGGAGCTGGGCGGGGAAGACTTCTGGAAGCGCAGCACAATaGTACTGGTGGCCACGAATGTGTAGGCCAGGAGTGTGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: GLGSWAGKTSGSAAQ*YWWPRMCRPGVCQG
Trigger: CCCTTGGCACACTCCTGGCCTACACATTCGTGGCCACCAGTATCATTGTGCTGCGCTTCCAGAAGTCTTCCCCGCCCAGCTCCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 90 bp CATCTGCAAGCGCTGAGTCGGGGTCCAGGCTGTGCCAGGGCACCATaGGGGTTAGCACGGTGGAGACAAGGATGTAGGCACCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: HLQALSRGPGCARAP*GLARWRQGCRHQLQ
Trigger: TTGCAGCTGGTGCCTACATCCTTGTCTCCACCGTGCTAACCCTCATGGTGCCCTGGCACAGCCTGGACCCCGACTCAGCGCTTGCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CAA 90 bp GGTCCTAAGGTCCTGAGGACTCCCCAGCCTGTGCAGGCCTGCAAACCCAGGCTGTGGGTCTCAGTGAAGTaGCGGATGCTGTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: GPKVLRTPQPVQACKPRLWVSVK*RMLWLN
Trigger: GTTCAGCCACAGCATCCGCAACTTCACTGAGACCCA...CAGCCTGGGTTTGCAGGCCTGCACAGGCTGGGGAGTCCTCAGGACCTTAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 90 bp CAGGGTCGAGTTCCCAAAGACAAGCACGCAGCCTATGGTGATGGCTaGGGCCAACATAACGCCAAGCGCCCAAGTCACCACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QGRVPKDKHAAYGDG*GQHNAKRPSHHCSR
Trigger: CCTGGAGCAGTGGTGACTTGGGCGCTTGGCGTTATGTTGGCCTCAGCCATCACCATAGGCTGCGTGCTTGTCTTTGGGAACTCGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 90 bp TGTGACTGTGACTCAGTCACAGATGGAGAAGGTCAGACCGCCGGCTaGCTGACTAGCCTAGGTCAGTTCGGGGAGGTTAAGGGCCACGTC +
Preference number: 5 (lower is better)
Translates to: CDCDSVTDGEGQTAG*LTSLGQFGEVKGHV
Trigger: GACGTGGCCCTTAACCTCCCCGAACTGACCTAGGCTAGTCAGTCAGCCGGCGGTCTGACCTTCTCCATCTGTGACTGAGTCACAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426145.1
CDS GCA 90 bp AGTTCAGCCCTGGCAGCTCCCGCTGGTTCTCCTTGCTATGCCGGATaGCATAGCCGAAATACACTGCAAGTCCCATCAGCAGCCAGATGG +
Preference number: 5 (lower is better)
Translates to: SSALAAPAGSPCYAG*HSRNTLQVPSAARW
Trigger: CCATCTGGCTGCTGATGGGACTTGCAGTGTATTTCGGCTATGGCATCCGGCATAGCAAGGAGAACCAGCGGGAGCTGCCAGGGCTGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS GCA 90 bp CGTAGTGTGTGGAGTTCAGCCCTGGCAGCTCCCGCTGGTTCTCCTTaGTATGCCGGATGCCATAGCCGAAATACACTGCAAGTCCCATCA +
Preference number: 5 (lower is better)
Translates to: RSVWSSALAAPAGSP*YAGCHSRNTLQVPS
Trigger: TGATGGGACTTGCAGTGTATTTCGGCTATGGCATCCGGCATAGCAAGGAGAACCAGCGGGAGCTGCCAGGGCTGAACTCCACACACTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CAA 90 bp ACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTGGGCAGAGTCCAGTCTTCCCGATACTGTaGCTGGTGAGCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: TAQVAGADHKQEGSGQSPVFPIL*LVSPQD
Trigger: GTCCTGGGGGCTCACCAGCAACAGTATCGGGAAGAC...TGGACTCTGCCCAGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CAA 90 bp CACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTGGGCCTTCCGTCTTCCCGATACTGTaGCTGGTGAGCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: HMAGQAIIIMDPLGCGPSVFPIL*LVSPQD
Trigger: GTCCTGGGGGCTCACCAGCAACAGTATCGGGAAGAC...GGAAGGCCCACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 90 bp ATGACAATGAAGAGAATGACAAGCAGGCTGATGGCCGAGAAGGTGTaGTTGAGCCAGGAGGACACGCGGGCTCCACAGGAGACAAAGGCA +
Preference number: 5 (lower is better)
Translates to: MTMKRMTSRLMAEKV*LSQEDTRAPQETKA
Trigger: TGCCTTTGTCTCCTGTGGAGCCCGCGTGTCCTCCTGGCTCAATCACACCTTCTCGGCCATCAGCCTGCTTGTCATTCTCTTCATTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CAA 90 bp CACCCCACCACAACTGCCCAGGTAGCTGGAGCTGATCATAAACAAGAAGGCTCTTGGGTCTCAGTGAAGTaGCGGATGCTGTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: HPTTTAQVAGADHKQEGSWVSVK*RMLWLN
Trigger: GTTCAGCCACAGCATCCGCAACTTCACTGAGACCCA...AGAGCCTTCTTGTTTATGATCAGCTCCAGCTACCTGGGCAGTTGTGGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS-3UTR CAA 90 bp CCAGCAGGCCACATGGCTGGCCAAGCAATTATTATTATGGATCCCTTGGGCTGTATTATTATGGATCCCTaGGGCTGTGGGCCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PAGHMAGQAIIIMDPLGCIIMDP*GCGPSH
Trigger: ATGGGAAGGCCCACAGCCCAAGGGATCCATAATAAT...ACAGCCCAAGGGATCCATAATAATAATTGCTTGGCCAGCCATGTGGCCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 72 bp GCGACTCCAGGTCCAGCAGCAGTGCCAGGAAGGCCGTaGGGAGCCCGAACGCCAGGGTGCCCGCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: ATPGPAAVPGRP*GARTPGCPPQA
Trigger: TGCCTGTGGCGGGCACCCTGGCGTTCGGGCTCCTCACGGCCTTCCTGGCACTGCTGCTGGACCTGGAGTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS GCA 72 bp CCCACCAGCTGTAGGTGGTCTGAGAAGGAGCTCTGCTaGTTGGTCAGGGGGCCAGGGCTGGCTGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: PTSCRWSEKELC*LVRGPGLAGPG
Trigger: CCCAGGCCCAGCCAGCCCTGGCCCCCTGACCAAGCAGCAGAGCTCCTTCTCAGACCACCTACAGCTGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp GTGCCCGCCACAGGCACCTGTGTCCGGGGGTGCACATaGGCAAACACCTGGAAGAAGAGCCCATCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: VPATGTCVRGCT*ANTWKKSPSAA
Trigger: GGCCGCCGATGGGCTCTTCTTCCAGGTGTTTGCCCATGTGCACCCCCGGACACAGGTGCCTGTGGCGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS GCA 72 bp GGCAGTGCCGGCCATGACGCCGGAGAAGCCGAAGGGTaGAAAGCCGCCTTCGTCAGCGCTCCAGTTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GSAGHDAGEAEG*KAAFVSAPVVR
Trigger: CCTCACAACTGGAGCGCTGACGAAGGCGGCTTTGCACCCTTCGGCTTCTCCGGCGTCATGGCCGGCACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS GCA 72 bp GCCAGGGTGCCCGCCACAGGCACCTGTGTCCGGGGGTaGACATGGGCAAACACCTGGAAGAAGAGCCCATCG +
Preference number: 6 (lower is better)
Translates to: ARVPATGTCVRG*TWANTWKKSPS
Trigger: CGATGGGCTCTTCTTCCAGGTGTTTGCCCATGTGCACCCCCGGACACAGGTGCCTGTGGCGGGCACCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp CCAGCGTGGACAGGCAGCGCCGCAGTGACGTCTCCATaGTGGAGTCCTCCAGCGGCTTCAGGCGGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: PAWTGSAAVTSP*WSPPAASGGSA
Trigger: AGCTGAACCGCCTGAAGCCGCTGGAGGACTCCACCATGGAGACGTCACTGCGGCGCTGCCTGTCCACGCTGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382932.3
ENST00000403586.5
ENST00000426145.1
CDS TCA 72 bp CCTGTAGCCCCGCTGGTAGAAGGCATCTGCAAGCGCTaGGTCGGGGTCCAGGCTGTGCCAGGGCACCATGAG +
Preference number: 6 (lower is better)
Translates to: PVAPLVEGICKR*VGVQAVPGHHE
Trigger: CTCATGGTGCCCTGGCACAGCCTGGACCCCGACTCAGCGCTTGCAGATGCCTTCTACCAGCGGGGCTACAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS GCA 72 bp GAGCAGGACGGTGTTCATGGCGCAGATGGAGCCAGCTaGCACGATGAAGCCAGCCCACCTGTAGCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: EQDGVHGADGAS*HDEASPPVAPL
Trigger: CAGCGGGGCTACAGGTGGGCTGGCTTCATCGTGGCAGCTGGCTCCATCTGCGCCATGAACACCGTCCTGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp GCGTGGACAGGCAGCGCCGCAGTGACGTCTCCATGGTaGAGTCCTCCAGCGGCTTCAGGCGGTTCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: AWTGSAAVTSPW*SPPAASGGSAS
Trigger: AGAAGCTGAACCGCCTGAAGCCGCTGGAGGACTCCACCATGGAGACGTCACTGCGGCGCTGCCTGTCCACGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382932.3
ENST00000403586.5
ENST00000426145.1
CDS CCA 72 bp ATGGCGATGGCCAGAGGCACAGACCGCCGTGGGTTCTaGGCCTCCTCACTGGAGGCGGCAATGACGTCGAAG +
Preference number: 6 (lower is better)
Translates to: MAMARGTDRRGF*ASSLEAAMTSK
Trigger: CTTCGACGTCATTGCCGCCTCCAGTGAGGAGGCCCAGAACCCACGGCGGTCTGTGCCTCTGGCCATCGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 72 bp AAGAGTCAGGTCCAGCGTGGACAGGCAGCGCCGCAGTaGCGTCTCCATGGTGGAGTCCTCCAGCGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: KSQVQRGQAAPQ*RLHGGVLQRLQ
Trigger: CTGAAGCCGCTGGAGGACTCCACCATGGAGACGTCACTGCGGCGCTGCCTGTCCACGCTGGACCTGACTCTT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382932.3
ENST00000403586.5
ENST00000426145.1
CDS TCA 72 bp CGGTGTTCATGGCGCAGATGGAGCCAGCTGCCACGATaGAGCCAGCCCACCTGTAGCCCCGCTGGTAGAAGG +
Preference number: 6 (lower is better)
Translates to: RCSWRRWSQLPR*SQPTCSPAGRR
Trigger: CCTTCTACCAGCGGGGCTACAGGTGGGCTGGCTTCATCGTGGCAGCTGGCTCCATCTGCGCCATGAACACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp TGTAGGCACCAGCTGCAATGGCAAGCGAGATGGCGATaGCCAGAGGCACAGACCGCCGTGGGTTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: CRHQLQWQARWR*PEAQTAVGSGP
Trigger: AGGCCCAGAACCCACGGCGGTCTGTGCCTCTGGCCATCGCCATCTCGCTTGCCATTGCAGCTGGTGCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp CCTCCAGGCTGCCCCTGGGGAATACCACGTAGTGTGTaGAGTTCAGCCCTGGCAGCTCCCGCTGGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: PPGCPWGIPRSV*SSALAAPAGSP
Trigger: AGGAGAACCAGCGGGAGCTGCCAGGGCTGAACTCCACACACTACGTGGTATTCCCCAGGGGCAGCCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp GTGGAGTCCTCCAGCGGCTTCAGGCGGTTCAGCTTCTaGCATAAGCGTGCCAGGCTAGCAATGGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: VESSSGFRRFSF*HKRARLAMVGS
Trigger: GCTGCCCACCATTGCTAGCCTGGCACGCTTATGCCAGAAGCTGAACCGCCTGAAGCCGCTGGAGGACTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382932.3
ENST00000403586.5
ENST00000426145.1
CDS CCA 72 bp CAAGGATGTAGGCACCAGCTGCAATGGCAAGCGAGATaGCGATGGCCAGAGGCACAGACCGCCGTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: QGCRHQLQWQAR*RWPEAQTAVGS
Trigger: AGAACCCACGGCGGTCTGTGCCTCTGGCCATCGCCATCTCGCTTGCCATTGCAGCTGGTGCCTACATCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp GCACGGTGGAGACAAGGATGTAGGCACCAGCTGCAATaGCAAGCGAGATGGCGATGGCCAGAGGCACAGACC +
Preference number: 6 (lower is better)
Translates to: ARWRQGCRHQLQ*QARWRWPEAQT
Trigger: GGTCTGTGCCTCTGGCCATCGCCATCTCGCTTGCCATTGCAGCTGGTGCCTACATCCTTGTCTCCACCGTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 72 bp TGGCATAGACAATGCGTGGCAGGGAGAAGAGGAGGCTaGGCAGGACGGTGTTCATGGCGCAGATGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: WHRQCVAGRRGG*AGRCSWRRWSQ
Trigger: CTGGCTCCATCTGCGCCATGAACACCGTCCTGCTCAGCCTCCTCTTCTCCCTGCCACGCATTGTCTATGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp CCTGGGGAATACCACGTAGTGTGTGGAGTTCAGCCCTaGCAGCTCCCGCTGGTTCTCCTTGCTATGCCGGAT +
Preference number: 6 (lower is better)
Translates to: PGEYHVVCGVQP*QLPLVLLAMPD
Trigger: ATCCGGCATAGCAAGGAGAACCAGCGGGAGCTGCCAGGGCTGAACTCCACACACTACGTGGTATTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 72 bp AAGAGAATGACAAGCAGGCTGATGGCCGAGAAGGTGTaGTTGAGCCAGGAGGACACGCGGGCTCCACAGGAG +
Preference number: 6 (lower is better)
Translates to: KRMTSRLMAEKV*LSQEDTRAPQE
Trigger: CTCCTGTGGAGCCCGCGTGTCCTCCTGGCTCAATCACACCTTCTCGGCCATCAGCCTGCTTGTCATTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS CCA 72 bp ACTGGTGAGCAGGAGCAGCAGGATGTAACCCCAGTGTaGGAGGTGCAGGGTCGAGTTCCCAAAGACAAGCAC +
Preference number: 6 (lower is better)
Translates to: TGEQEQQDVTPV*EVQGRVPKDKH
Trigger: GTGCTTGTCTTTGGGAACTCGACCCTGCACCTCCCACACTGGGGTTACATCCTGCTGCTCCTGCTCACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 72 bp GTTCCCAAAGACAAGCACGCAGCCTATGGTGATGGCTaGGGCCAACATAACGCCAAGCGCCCAAGTCACCAC +
Preference number: 6 (lower is better)
Translates to: VPKDKHAAYGDG*GQHNAKRPSHH
Trigger: GTGGTGACTTGGGCGCTTGGCGTTATGTTGGCCTCAGCCATCACCATAGGCTGCGTGCTTGTCTTTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS TCA 72 bp GACTCAGTCACAGATGGAGAAGGTCAGACCGCCGGCTaGCTGACTAGCCTAGGTCAGTTCGGGGAGGTTAAG +
Preference number: 6 (lower is better)
Translates to: DSVTDGEGQTAG*LTSLGQFGEVK
Trigger: CTTAACCTCCCCGAACTGACCTAGGCTAGTCAGTCAGCCGGCGGTCTGACCTTCTCCATCTGTGACTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426145.1
CDS GCA 72 bp CTGGCAGCTCCCGCTGGTTCTCCTTGCTATGCCGGATaGCATAGCCGAAATACACTGCAAGTCCCATCAGCA +
Preference number: 6 (lower is better)
Translates to: LAAPAGSPCYAG*HSRNTLQVPSA
Trigger: TGCTGATGGGACTTGCAGTGTATTTCGGCTATGGCATCCGGCATAGCAAGGAGAACCAGCGGGAGCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5
CDS GCA 72 bp TGGAGTTCAGCCCTGGCAGCTCCCGCTGGTTCTCCTTaGTATGCCGGATGCCATAGCCGAAATACACTGCAA +
Preference number: 6 (lower is better)
Translates to: WSSALAAPAGSP*YAGCHSRNTLQ
Trigger: TTGCAGTGTATTTCGGCTATGGCATCCGGCATAGCAAGGAGAACCAGCGGGAGCTGCCAGGGCTGAACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382932.3
ENST00000403586.5