RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC7A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000003989

Ensembl transcript IDs: ENST00000004531.14, ENST00000398090.3, ENST00000470360.5, ENST00000494857.6, ENST00000522656.5, ENST00000640220.1

Found 837 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCATCAGTCTAAGAGCCCACCCAACAAGGGTAGCTACACATAGATaGTCACACTCTATAGGCTGCCTGATCCTGGAACCAGCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: PISLRAHPTRVATHR*SHSIGCLILEPAWG
Trigger: GCCCCAGGCTGGTTCCAGGATCAGGCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTACCCTTGTTGGGTGGGCTCTTAGACTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 90 bp GCCAGAGAAACCCAACCTGTTGGCAATATGACGCTCTTTCCCAACTaGGTCTTGGTGAGACACGTGGCACAGCAAGGCTGTCAGTGCATG +
Preference number: 1 (lower is better)
Translates to: ARETQPVGNMTLFPN*VLVRHVAQQGCQCM
Trigger: CATGCACTGACAGCCTTGCTGTGCCACGTGTCTCACCAAGACCCAGTTGGGAAAGAGCGTCATATTGCCAACAGGTTGGGTTTCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 90 bp CACCCAACAAGGGTAGCTACACATAGATGCTCACACTCTATAGGCTaGCTGATCCTGGAACCAGCCTGGGGCCCTGATTATGATCTCCAC +
Preference number: 1 (lower is better)
Translates to: HPTRVATHRCSHSIG*LILEPAWGPDYDLH
Trigger: GTGGAGATCATAATCAGGGCCCCAGGCTGGTTCCAGGATCAGGCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTACCCTTGTTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 90 bp CCCAACTGGGTCTTGGTGAGACACGTGGCACAGCAAGGCTGTCAGTaGATGTGCATAAATTGTAGACCAGGTCCCACTATGCTACTTCAG +
Preference number: 1 (lower is better)
Translates to: PNWVLVRHVAQQGCQ*MCINCRPGPTMLLQ
Trigger: CTGAAGTAGCATAGTGGGACCTGGTCTACAATTTATGCACATGCACTGACAGCCTTGCTGTGCCACGTGTCTCACCAAGACCCAGTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 90 bp TTTAAGAGGAGGGAAGGCAAGGCTCAAGTGCTCCCTCTGTCATCATaGGTATTGGAGGCCGATGGCTTTTCCTTATGCTTCCTGCTAAGC +
Preference number: 1 (lower is better)
Translates to: FKRREGKAQVLPLSS*VLEADGFSLCFLLS
Trigger: GCTTAGCAGGAAGCATAAGGAAAAGCCATCGGCCTCCAATACCCATGATGACAGAGGGAGCACTTGAGCCTTGCCTTCCCTCCTCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 90 bp AAACGAATGTTTTCCTTGTCTTGGGATTACACGGGCCAGCTAGCATaGCTGGTAATGTTCACCATGCTGTCCTGGGAAATGTCACCCAGC +
Preference number: 1 (lower is better)
Translates to: KRMFSLSWDYTGQLA*LVMFTMLSWEMSPS
Trigger: GCTGGGTGACATTTCCCAGGACAGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 90 bp GTTTGCAAAGGAGACAAAAGTTCAAAAGGATGCCAACTAGTGGCATaGAATGCCACTCCTGGCCTGTGTAGTGCAGCAGAAGCAGACACC +
Preference number: 1 (lower is better)
Translates to: VCKGDKSSKGCQLVA*NATPGLCSAAEADT
Trigger: GGTGTCTGCTTCTGCTGCACTACACAGGCCAGGAGTGGCATTCCATGCCACTAGTTGGCATCCTTTTGAACTTTTGTCTCCTTTGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp AGCCTGTGCTTATCCAACTCCTTCTCTCCAGTAAACCACGCAGCTTaGGAGAAAATTCTGGGCTTCAGATTTTACCATGTGCACCCTGGA +
Preference number: 1 (lower is better)
Translates to: SLCLSNSFSPVNHAA*EKILGFRFYHVHPG
Trigger: TCCAGGGTGCACATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAGCTGCGTGGTTTACTGGAGAGAAGGAGTTGGATAAGCACAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp GACCAGGTCCCACTATGCTACTTCAGGATTCAGCCAGCCCTTCTATaGGTCACAGAGGTCCCTTGGTCCTTATTCATCTTGATATACTCA +
Preference number: 1 (lower is better)
Translates to: DQVPLCYFRIQPALL*VTEVPWSLFILIYS
Trigger: TGAGTATATCAAGATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTGAAGTAGCATAGTGGGACCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp GAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATaGGCATGCCTACAGTCCCTACCAAAATACCCGAGCCTGTGCTTA +
Preference number: 1 (lower is better)
Translates to: ESNGFSAYCDNSKDL*ACLQSLPKYPSLCL
Trigger: TAAGCACAGGCTCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp TACATACACACTCCCACTGTTTGGGGGCTATTCATCACTGATGAATaGAACTTCCACTCAGGAGGTTTCCCCGTGCACATAATTCACCAT +
Preference number: 1 (lower is better)
Translates to: YIHTPTVWGLFITDE*NFHSGGFPVHIIHH
Trigger: ATGGTGAATTATGTGCACGGGGAAACCTCCTGAGTGGAAGTTTCATTCATCAGTGATGAATAGCCCCCAAACAGTGGGAGTGTGTATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp AAGCTCTTTAAGACCCAGCGATCATGGCAGTGGCATCAACCATGGTaGATCAAAGTTAAGTATAATGCTCCCAGCAAACAGTGTTACCAG +
Preference number: 1 (lower is better)
Translates to: KLFKTQRSWQWHQPW*IKVKYNAPSKQCYQ
Trigger: CTGGTAACACTGTTTGCTGGGAGCATTATACTTAACTTTGATTCACCATGGTTGATGCCACTGCCATGATCGCTGGGTCTTAAAGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp CAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCTTaGTATACTCATGGGATGTTTGGAATTAAGGAGCCCAAACTACCT +
Preference number: 1 (lower is better)
Translates to: QPFYESQRSLGPYSS*YTHGMFGIKEPKLP
Trigger: AGGTAGTTTGGGCTCCTTAATTCCAAACATCCCATGAGTATATCAAGATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 90 bp AACATCAGAGGCAAATTAGATCCAAAGCCCTTAAATTGGGCCATTTaGCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGA +
Preference number: 1 (lower is better)
Translates to: NIRGKLDPKPLNWAI*HLTMEQAVPIRTGG
Trigger: TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGATCTAATTTGCCTCTGATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 90 bp AGCTTGAGAGAAAATTCTGGGCTTCAGATTTTACCATGTGCACCCTaGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCT +
Preference number: 1 (lower is better)
Translates to: SLRENSGLQILPCAP*KLWNVRNEFCVMDA
Trigger: AGCATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp AATTTAAAGGGTCCCAAGTATATCACAGTGCCTCTCTTAAGTCCCTaGCTGGGGATACGTCATTCACAGCAAGTGAAGACCTCGTATTTT +
Preference number: 1 (lower is better)
Translates to: NLKGPKYITVPLLSP*LGIRHSQQVKTSYF
Trigger: AAAATACGAGGTCTTCACTTGCTGTGAATGACGTATCCCCAGTCAGGGACTTAAGAGAGGCACTGTGATATACTTGGGACCCTTTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp CTATTCTTGATTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTaGCAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAA +
Preference number: 1 (lower is better)
Translates to: LFLIGYRIKRVFSVL*QQQGFMSMPTVPTK
Trigger: TTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAATCAAGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 90 bp ATGGGATGTTTGGAATTAAGGAGCCCAAACTACCTTACTTGCATTTaGAGTCTTTCACTTCATATCCTACCCCATCAGTCTAAGAGCCCA +
Preference number: 1 (lower is better)
Translates to: MGCLELRSPNYLTCI*SLSLHILPHQSKSP
Trigger: TGGGCTCTTAGACTGATGGGGTAGGATATGAAGTGAAAGACTTCAAATGCAAGTAAGGTAGTTTGGGCTCCTTAATTCCAAACATCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 90 bp TCCAAAGGAAACATCAGAGGCAAATTAGATCCAAAGCCCTTAAATTaGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGA +
Preference number: 1 (lower is better)
Translates to: SKGNIRGKLDPKPLN*AICHLTMEQAVPIR
Trigger: TCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGATCTAATTTGCCTCTGATGTTTCCTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 90 bp GATGAAACCTCTTTACATTCAGTGATTTCCCTCTATTTCAGTATGTaGAGTATATGCCACCGATTAATGACGACACTGGAAAAATGTAAC +
Preference number: 1 (lower is better)
Translates to: DETSLHSVISLYFSM*SICHRLMTTLEKCN
Trigger: GTTACATTTTTCCAGTGTCGTCATTAATCGGTGGCATATACTGCACATACTGAAATAGAGGGAAATCACTGAATGTAAAGAGGTTTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTGCCAACTAGTGGCATaGAATGCCACTCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: LVLGLHGPASMPGNVHHACQLVA*NATPGL
Trigger: CAGGCCAGGAGTGGCATTCCATGCCACTAGTTGGCA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCTTTCCCTCTTTGCATaGTGCTGCTGTAGCCCCCTC +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHLSLFA*CCCSPL
Trigger: GAGGGGGCTACAGCAGCATCATGCAAAGAGGGAAAG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGTAATCTCAGCTCACTaGAGCCTCACTCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNVISAH*SLTLLG
Trigger: GCCCAGGAGAGTGAGGCTGCAGTGAGCTGAGATTAC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTAATCTCAGCTCACTaGAGCCTCACTCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVISAH*SLTLLG
Trigger: GCCCAGGAGAGTGAGGCTGCAGTGAGCTGAGATTAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTCTCGGAACACACCCTaGTTTAAGAGGAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNSRNTP*FKRREG
Trigger: GCCTTCCCTCCTCTTAAATCAGGGTGTGTTCCGAGA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATACGGGCCAGCTAGCATaGCTGGTAATGTTCACCATG +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHTGQLA*LVMFTM
Trigger: CATGGTGAACATTACCAGGCATGCTAGCTGGCCCGT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGTAGAGACAGGGTCTTaGTATGCTACTCAGGCCGGT +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNVETGS*YATQAG
Trigger: ACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTAC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAGCTCTGACTACATGTaGATGCCACCATGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHSSDYM*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCACATGTAGTCAGAGCT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGCTCTGACTACATGTaGATGCCACCATGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNSSDYM*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCACATGTAGTCAGAGCT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGTAATCTCAGCTCACTaGAGCCTCACTCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPVISAH*SLTLLG
Trigger: GCCCAGGAGAGTGAGGCTGCAGTGAGCTGAGATTAC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTTGCCCAGGCTAGAGTaGAGTGGCGTAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLPRLE*SGVISA
Trigger: AGCTGAGATTACGCCACTGCACTCTAGCCTGGGCAA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTTCACCATGCTGTCCTaGGAAATGTCACCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHFTMLS*EMSPSL
Trigger: GAGGCTGGGTGACATTTCCCAGGACAGCATGGTGAA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCCGGTCTTAAACTCCTaGGCTCAAGCGATCAGCTTG +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHPVLNS*AQAISL
Trigger: CAAGCTGATCGCTTGAGCCCAGGAGTTTAAGACCGG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTCCCTCTGTCATCATaGGTATTGGAGGCCGATGGC +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPLPLSS*VLEADG
Trigger: GCCATCGGCCTCCAATACCCATGATGACAGAGGGAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTGTATGCTAAGACGATaGCCAGCTCTGCTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNCMLRR*PALLLQ
Trigger: TTGCAGGAGCAGAGCTGGTCATCGTCTTAGCATACA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTATGCTAAGACGATaGCCAGCTCTGCTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQCMLRR*PALLLQ
Trigger: TTGCAGGAGCAGAGCTGGTCATCGTCTTAGCATACA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
3UTR-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGACACCCCTGTTGGCTaGAGTTTGAGCAAACTGTCA +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNDTPVG*SLSKLS
Trigger: TGACAGTTTGCTCAAACTTCAGCCAACAGGGGTGTC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGACACCCCTGTTGGCTaGAGTTTGAGCAAACTGTCA +
Preference number: 2 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGDTPVG*SLSKLS
Trigger: TGACAGTTTGCTCAAACTTCAGCCAACAGGGGTGTC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCCTCTCTTAAGTCCCTaGCTGGGGATACGTCATTCA +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNPLLSP*LGIRHS
Trigger: TGAATGACGTATCCCCAGTCAGGGACTTAAGAGAGG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGAGAAACAAAGAAGTaGACTCTGGGCCTGACGAGG +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNRETKK*TLGLTR
Trigger: CCTCGTCAGGCCCAGAGTTCACTTCTTTGTTTCTCT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGTAGAGACAGGGTCTTaGTATGCTACTCAGGCCGGT +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPVETGS*YATQAG
Trigger: ACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTAC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAGCTCTGACTACATGTaGATGCCACCATGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPSSDYM*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCACATGTAGTCAGAGCT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATTCACCATGCTGTCCTaGGAAATGTCACCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPFTMLS*EMSPSL
Trigger: GAGGCTGGGTGACATTTCCCAGGACAGCATGGTGAA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 90 bp GAGCCTGTGCTTATCCAACTCCTTCTCTCCAGTAAACCACGCAGCTaGAGAGAAAATTCTGGGCTTCAGATTTTACCATGTGCACCCTGG +
Preference number: 2 (lower is better)
Translates to: EPVLIQLLLSSKPRS*RENSGLQILPCAPW
Trigger: CCAGGGTGCACATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAGCTGCGTGGTTTACTGGAGAGAAGGAGTTGGATAAGCACAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGTGTATGCTAAGACGATaGCCAGCTCTGCTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMCMLRR*PALLLQ
Trigger: TTGCAGGAGCAGAGCTGGTCATCGTCTTAGCATACA...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACATTCCACTAGTTGTGTaGTCTGGGAGAGTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNIPLVV*SGRVCW
Trigger: CCAACAGACTCTCCCAGACCACACAACTAGTGGAAT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAATTCCACTAGTTGTGTaGTCTGGGAGAGTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGIPLVV*SGRVCW
Trigger: CCAACAGACTCTCCCAGACCACACAACTAGTGGAAT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACAGTCGGAAAAGGTGTaGCAGCAGCAAGTAAACAGG +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPQSEKV*QQQVNR
Trigger: CCTGTTTACTTGCTGCTGCCACACCTTTTCCGACTG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGGTATTGGAGGCCGATaGCTTTTCCTTATGCTTCCT +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHGIGGR*LFLMLP
Trigger: AGGAAGCATAAGGAAAAGCCATCGGCCTCCAATACC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTGTCATCATGGGTATTaGAGGCCGATGGCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHCHHGY*RPMAFP
Trigger: AGGAAAAGCCATCGGCCTCCAATACCCATGATGACA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTGCAGGGGGCATAGATaGAACCTCTTTACATTCAGT +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNCRGHR*NLFTFS
Trigger: ACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGTCATTCACAGCAAGTaGAGACCTCGTATTTTAGGA +
Preference number: 2 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAVIHSK*RPRILG
Trigger: TCCTAAAATACGAGGTCTTCACTTGCTGTGAATGAC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAACAGCAAGGATTTATaGGCATGCCTACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHNSKDL*ACLQSL
Trigger: TAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAGGGTGAACTATGTATaGAGCAAACCCATGACAACC +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHRVNYV*SKPMTT
Trigger: GGTTGTCATGGGTTTGCTGCATACATAGTTCACCCT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAAATACCCGAGCCTGTaGTTATCCAACTCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNKYPSL*LSNSFS
Trigger: AGAGAAGGAGTTGGATAAGCACAGGCTCGGGTATTT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTAGCTACACATAGATaGTCACACTCTATAGGCTGC +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVATHR*SHSIGC
Trigger: GCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAGCAGACACCCCTGTTaGCTGAAGTTTGAGCAAACT +
Preference number: 2 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMSRHPC*LKFEQT
Trigger: AGTTTGCTCAAACTTCAGCCAACAGGGGTGTCTGCT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATACTAGTTGTGTGGTCTaGGAGAGTCTGTTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHTSCVV*ESLLAY
Trigger: ATAAGCCAACAGACTCTCCCAGACCACACAACTAGT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATGTCATCATGGGTATTaGAGGCCGATGGCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPCHHGY*RPMAFP
Trigger: AGGAAAAGCCATCGGCCTCCAATACCCATGATGACA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGGAGAGTCAGAATCTTaGCATGATTTCATCACGCCA +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNGESES*HDFITP
Trigger: TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAGGGTGAACTATGTATaGAGCAAACCCATGACAACC +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPRVNYV*SKPMTT
Trigger: GGTTGTCATGGGTTTGCTGCATACATAGTTCACCCT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAGGGTGAACTATGTATaGAGCAAACCCATGACAACC +
Preference number: 2 (lower is better)
Translates to: SPTAGGIDETSLHSVISLRVNYV*SKPMTT
Trigger: GGTTGTCATGGGTTTGCTGCATACATAGTTCACCCT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTCAGATTTTACCATGTaGACCCTGGAAGTTGTGGAA +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNSDFTM*TLEVVE
Trigger: TTCCACAACTTCCAGGGTGCACATGGTAAAATCTGA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCAGCAAGGCTGTCAGTaGATGTGCATAAATTGTAGA +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNQQGCQ*MCINCR
Trigger: TCTACAATTTATGCACATGCACTGACAGCCTTGCTG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAAGCAGACACCCCTGTTaGCTGAAGTTTGAGCAAACT +
Preference number: 2 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRSRHPC*LKFEQT
Trigger: AGTTTGCTCAAACTTCAGCCAACAGGGGTGTCTGCT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGACTAGTTGTGTGGTCTaGGAGAGTCTGTTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMTSCVV*ESLLAY
Trigger: ATAAGCCAACAGACTCTCCCAGACCACACAACTAGT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCCAAAGCCCTTAAATTaGGCCATTTGCCATTTAACA +
Preference number: 2 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAPKPLN*AICHLT
Trigger: TGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 90 bp TCATTTCTTGGAAGACCCATGAGGAAAACGAATGTTTTCCTTGTCTaGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCAT +
Preference number: 2 (lower is better)
Translates to: SFLGRPMRKTNVFLV*GLHGPASMPGNVHH
Trigger: ATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTTTCCTCATGGGTCTTCCAAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGTCATTCACAGCAAGTaGAGACCTCGTATTTTAGGA +
Preference number: 2 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMVIHSK*RPRILG
Trigger: TCCTAAAATACGAGGTCTTCACTTGCTGTGAATGAC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGCTTTCTGGCCCTGGTaGCTATCTTCACTTTTTAAT +
Preference number: 2 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMAFWPW*LSSLFN
Trigger: ATTAAAAAGTGAAGATAGTCACCAGGGCCAGAAAGC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGCTTTCTGGCCCTGGTaGCTATCTTCACTTTTTAAT +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPAFWPW*LSSLFN
Trigger: ATTAAAAAGTGAAGATAGTCACCAGGGCCAGAAAGC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATTCTTGGAAGACCCATaGGGAAAACGAATGTTTTCC +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPFLEDP*GKRMFS
Trigger: GGAAAACATTCGTTTTCCTCATGGGTCTTCCAAGAA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGTTTTCAGCGTACTGTaGCAACAGCAAGGATTTATG +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPVFSVL*QQQGFM
Trigger: CATAAATCCTTGCTGTTGTCACAGTACGCTGAAAAC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAGTATGTGCAGTATATaGCACCGATTAATGACGACA +
Preference number: 2 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGSMCSI*HRLMTT
Trigger: TGTCGTCATTAATCGGTGGCATATACTGCACATACT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCTTTGCTGGCATTATTaGTACGCGAATATCCATACT +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLCWHY*YANIHT
Trigger: AGTATGGATATTCGCGTAGCAATAATGCCAGCAAAG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAACTAGTTGTGTGGTCTaGGAGAGTCTGTTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRTSCVV*ESLLAY
Trigger: ATAAGCCAACAGACTCTCCCAGACCACACAACTAGT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCCAAAGCCCTTAAATTaGGCCATTTGCCATTTAACA +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHPKPLN*AICHLT
Trigger: TGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGTGCTACACAATTTATaGGGTAGGGGGAGAAAAATA +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNVLHNL*GRGRKI
Trigger: TATTTTTCTCCCCCTACCCCATAAATTGTGTAGCAC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTTCACCATGCTGTCCTaGGAAATGTCACCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHFTMLS*EMSPSL
Trigger: GAGGCTGGGTGACATTTCCCAGGACAGCATGGTGAA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTTTCTCCACATCAGTTaGGTTTTGTACCCACCTAAT +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHFLHIS*VLYPPN
Trigger: ATTAGGTGGGTACAAAACCCAACTGATGTGGAGAAA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTTTCTCCACATCAGTTaGGTTTTGTACCCACCTAAT +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNFLHIS*VLYPPN
Trigger: ATTAGGTGGGTACAAAACCCAACTGATGTGGAGAAA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGAAAATGACCTTTGCTaGCATTATTGCTACGCGAAT +
Preference number: 2 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNENDLC*HYCYAN
Trigger: ATTCGCGTAGCAATAATGCCAGCAAAGGTCATTTTC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 90 bp AAACATCAGAGGCAAATTAGATCCAAAGCCCTTAAATTGGGCCATTaGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGG +
Preference number: 2 (lower is better)
Translates to: KHQRQIRSKALKLGH*PFNNGTGRSYQNRG
Trigger: CCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGATCTAATTTGCCTCTGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCCTCTTTACATTCAGTaGTTTCCCTCTATTTCAGTA +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHPLYIQ*FPSISV
Trigger: TACTGAAATAGAGGGAAATCACTGAATGTAAAGAGG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGACACCCCTGTTGGCTaGAGTTTGAGCAAACTGTCA +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHDTPVG*SLSKLS
Trigger: TGACAGTTTGCTCAAACTTCAGCCAACAGGGGTGTC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGCTTTCTGGCCCTGGTaGCTATCTTCACTTTTTAAT +
Preference number: 2 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRAFWPW*LSSLFN
Trigger: ATTAAAAAGTGAAGATAGTCACCAGGGCCAGAAAGC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAGGGTGAACTATGTATaGAGCAAACCCATGACAACC +
Preference number: 2 (lower is better)
Translates to: ATSISPTAGGIDETSLHSRVNYV*SKPMTT
Trigger: GGTTGTCATGGGTTTGCTGCATACATAGTTCACCCT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCTCTATTTCAGTATGTaGAGTATATGCCACCGATTA +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHLYFSM*SICHRL
Trigger: TAATCGGTGGCATATACTGCACATACTGAAATAGAG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTTAAATTGGGCCATTTaGCATTTAACAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: LVLGLHGPASMPGNVHHALNWAI*HLTMEQ
Trigger: CTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTTAGAAAAGGATGCTTaGGGTCTACTTATTCAAGCA +
Preference number: 2 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHLEKDA*GLLIQA
Trigger: TGCTTGAATAAGTAGACCCCAAGCATCCTTTTCTAA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATTTCTCCACATCAGTTaGGTTTTGTACCCACCTAAT +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPFLHIS*VLYPPN
Trigger: ATTAGGTGGGTACAAAACCCAACTGATGTGGAGAAA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 90 bp AGAGAAAATTCTGGGCTTCAGATTTTACCATGTGCACCCTGGAAGTaGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCTATAACG +
Preference number: 2 (lower is better)
Translates to: RENSGLQILPCAPWK*WNVRNEFCVMDAIT
Trigger: CGTTATAGCATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATGGTAAAATCTGAAGCCCAGAATTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 90 bp CTACTTCAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTaGGTCCTTATTCATCTTGATATACTCATGGGATGTTTGGAATTA +
Preference number: 2 (lower is better)
Translates to: LLQDSASPSMSHRGP*VLIHLDILMGCLEL
Trigger: TAATTCCAAACATCCCATGAGTATATCAAGATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTGAAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATGTATGCTAAGACGATaGCCAGCTCTGCTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: PQSLMGYCITLELVLLGLCMLRR*PALLLQ
Trigger: TTGCAGGAGCAGAGCTGGTCATCGTCTTAGCATACA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATTCATCACTGATGAATaGAACTTCCACTCAGGAGGT +
Preference number: 2 (lower is better)
Translates to: ATSISPTAGGIDETSLHSFITDE*NFHSGG
Trigger: ACCTCCTGAGTGGAAGTTTCATTCATCAGTGATGAA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACCTCTTTACATTCAGTaGTTTCCCTCTATTTCAGTA +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPPLYIQ*FPSISV
Trigger: TACTGAAATAGAGGGAAATCACTGAATGTAAAGAGG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGACACCCCTGTTGGCTaGAGTTTGAGCAAACTGTCA +
Preference number: 2 (lower is better)
Translates to: PQSLMGYCITLELVLLGLDTPVG*SLSKLS
Trigger: TGACAGTTTGCTCAAACTTCAGCCAACAGGGGTGTC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGACGAGAAATAGTTCATaGGAAGCAAATACACTGCAA +
Preference number: 2 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMTRNSS*EANTLQ
Trigger: TTGCAGTGTATTTGCTTCTCATGAACTATTTCTCGT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTCTATTTCAGTATGTaGAGTATATGCCACCGATTA +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPLYFSM*SICHRL
Trigger: TAATCGGTGGCATATACTGCACATACTGAAATAGAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAAAAGTTCAAAAGGATaGCAACTAGTGGCATGGAAT +
Preference number: 2 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMKSSKG*QLVAWN
Trigger: ATTCCATGCCACTAGTTGGCATCCTTTTGAACTTTT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAAAAGTTCAAAAGGATaGCAACTAGTGGCATGGAAT +
Preference number: 2 (lower is better)
Translates to: SSITGKGESESWHDFITPKSSKG*QLVAWN
Trigger: ATTCCATGCCACTAGTTGGCATCCTTTTGAACTTTT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGTTCTGTGTCATGGATaGTATAACGCTAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHVLCHG*YNASSQ
Trigger: CTGGCTGCTAGCGTTATAGCATCCATGACACAGAAC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAGTTCTGTGTCATGGATaGTATAACGCTAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLVLCHG*YNASSQ
Trigger: CTGGCTGCTAGCGTTATAGCATCCATGACACAGAAC...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACCACACTCCCACTGTTTaGGGGCTATTCATCACTGAT +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHHTPTV*GLFITD
Trigger: ATCAGTGATGAATAGCCCCCAAACAGTGGGAGTGTG...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACATTCCACTAGTTGTGTaGTCTGGGAGAGTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHIPLVV*SGRVCW
Trigger: CCAACAGACTCTCCCAGACCACACAACTAGTGGAAT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGATCACAATAAACTCCTaGCTATACAAAACCATCGCA +
Preference number: 2 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMITINS*LYKTIA
Trigger: TGCGATGGTTTTGTATAGCCAGGAGTTTATTGTGAT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGCACCCTGGAAGTTGTaGAATGTCCGTAATGAGTTC +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHAPWKL*NVRNEF
Trigger: GAACTCATTACGGACATTCCACAACTTCCAGGGTGC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTTACCATGTGCACCCTaGAAGTTGTGGAATGTCCGT +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHLPCAP*KLWNVR
Trigger: ACGGACATTCCACAACTTCCAGGGTGCACATGGTAA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 90 bp TTCCAAAGGAAACATCAGAGGCAAATTAGATCCAAAGCCCTTAAATaGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAG +
Preference number: 2 (lower is better)
Translates to: FQRKHQRQIRSKALK*GHLPFNNGTGRSYQ
Trigger: CTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGATCTAATTTGCCTCTGATGTTTCCTTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 90 bp GCTATAACGCTAGCAGCCAGAAACCCAGGCTTTCTACCTGTTTCTTaGATGTTTAATCACAATAAACTCCTGGCTATACAAAACCATCGC +
Preference number: 2 (lower is better)
Translates to: AITLAARNPGFLPVS*MFNHNKLLAIQNHR
Trigger: GCGATGGTTTTGTATAGCCAGGAGTTTATTGTGATTAAACATCAAAGAAACAGGTAGAAAGCCTGGGTTTCTGGCTGCTAGCGTTATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACTGTTGGCTGAAGTTTaGGCAAACTGTCATACCTCA +
Preference number: 2 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLLLAEV*ANCHTS
Trigger: TGAGGTATGACAGTTTGCTCAAACTTCAGCCAACAG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAAAATACCCGAGCCTGTaGTTATCCAACTCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLKYPSL*LSNSFS
Trigger: AGAGAAGGAGTTGGATAAGCACAGGCTCGGGTATTT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACACACTCCCACTGTTTaGGGGCTATTCATCACTGAT +
Preference number: 2 (lower is better)
Translates to: PQSLMGYCITLELVLLGLHTPTV*GLFITD
Trigger: ATCAGTGATGAATAGCCCCCAAACAGTGGGAGTGTG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACATGTTTTCCTTGTCTTaGGATTACACGGGCCAGCTA +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHMFSLS*DYTGQL
Trigger: TAGCTGGCCCGTGTAATCCCAAGACAAGGAAAACAT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATTCTTGGAAGACCCATaGGGAAAACGAATGTTTTCC +
Preference number: 2 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLFLEDP*GKRMFS
Trigger: GGAAAACATTCGTTTTCCTCATGGGTCTTCCAAGAA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR TCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGTTTTCAGCGTACTGTaGCAACAGCAAGGATTTATG +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHVFSVL*QQQGFM
Trigger: CATAAATCCTTGCTGTTGTCACAGTACGCTGAAAAC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATTAAATTGGGCCATTTaGCATTTAACAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRLNWAI*HLTMEQ
Trigger: CTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATCAGATTTTACCATGTaGACCCTGGAAGTTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLSDFTM*TLEVVE
Trigger: TTCCACAACTTCCAGGGTGCACATGGTAAAATCTGA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAACTAGTTGTGTGGTCTaGGAGAGTCTGTTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: PQSLMGYCITLELVLLGLTSCVV*ESLLAY
Trigger: ATAAGCCAACAGACTCTCCCAGACCACACAACTAGT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTTTAGGACCACTGTTTaGAAAGGAGACAAAAGTTCA +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHFRTTV*KGDKSS
Trigger: TGAACTTTTGTCTCCTTTGCAAACAGTGGTCCTAAA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGTGCTACACAATTTATaGGGTAGGGGGAGAAAAATA +
Preference number: 2 (lower is better)
Translates to: PQSLMGYCITLELVLLGLVLHNL*GRGRKI
Trigger: TATTTTTCTCCCCCTACCCCATAAATTGTGTAGCAC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAATCACAATAAACTCCTaGCTATACAAAACCATCGCA +
Preference number: 2 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLITINS*LYKTIA
Trigger: TGCGATGGTTTTGTATAGCCAGGAGTTTATTGTGAT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACTTGAGAGAAAATTCTaGGCTTCAGATTTTACCATG +
Preference number: 2 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLLERKF*ASDFTM
Trigger: CATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACTCTATTTCAGTATGTaGAGTATATGCCACCGATTA +
Preference number: 2 (lower is better)
Translates to: PQSLMGYCITLELVLLGLLYFSM*SICHRL
Trigger: TAATCGGTGGCATATACTGCACATACTGAAATAGAG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAAAAGTTCAAAAGGATaGCAACTAGTGGCATGGAAT +
Preference number: 2 (lower is better)
Translates to: PQSLMGYCITLELVLLGLKSSKG*QLVAWN
Trigger: ATTCCATGCCACTAGTTGGCATCCTTTTGAACTTTT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATTTAGGACCACTGTTTaGAAAGGAGACAAAAGTTCA +
Preference number: 2 (lower is better)
Translates to: PQSLMGYCITLELVLLGLFRTTV*KGDKSS
Trigger: TGAACTTTTGTCTCCTTTGCAAACAGTGGTCCTAAA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTTAAATTGGGCCATTTaGCATTTAACAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHLNWAI*HLTMEQ
Trigger: CTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 72 bp TCACACTCTATAGGCTGCCTGATCCTGGAACCAGCCTaGGGCCCTGATTATGATCTCCACGGGGCTGTCAGT +
Preference number: 3 (lower is better)
Translates to: SHSIGCLILEPA*GPDYDLHGAVS
Trigger: ACTGACAGCCCCGTGGAGATCATAATCAGGGCCCCAGGCTGGTTCCAGGATCAGGCAGCCTATAGAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 72 bp ACCCAACCTGTTGGCAATATGACGCTCTTTCCCAACTaGGTCTTGGTGAGACACGTGGCACAGCAAGGCTGT +
Preference number: 3 (lower is better)
Translates to: TQPVGNMTLFPN*VLVRHVAQQGC
Trigger: ACAGCCTTGCTGTGCCACGTGTCTCACCAAGACCCAGTTGGGAAAGAGCGTCATATTGCCAACAGGTTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 72 bp AGGGTAGCTACACATAGATGCTCACACTCTATAGGCTaGCTGATCCTGGAACCAGCCTGGGGCCCTGATTAT +
Preference number: 3 (lower is better)
Translates to: RVATHRCSHSIG*LILEPAWGPDY
Trigger: ATAATCAGGGCCCCAGGCTGGTTCCAGGATCAGGCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 72 bp AGGGAAGGCAAGGCTCAAGTGCTCCCTCTGTCATCATaGGTATTGGAGGCCGATGGCTTTTCCTTATGCTTC +
Preference number: 3 (lower is better)
Translates to: REGKAQVLPLSS*VLEADGFSLCF
Trigger: GAAGCATAAGGAAAAGCCATCGGCCTCCAATACCCATGATGACAGAGGGAGCACTTGAGCCTTGCCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 72 bp GCATGCCTACAGTCCCTACCAAAATACCCGAGCCTGTaGTTATCCAACTCCTTCTCTCCAGTAAACCACGCA +
Preference number: 3 (lower is better)
Translates to: ACLQSLPKYPSL*LSNSFSPVNHA
Trigger: TGCGTGGTTTACTGGAGAGAAGGAGTTGGATAAGCACAGGCTCGGGTATTTTGGTAGGGACTGTAGGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 72 bp CTAAGAGCCCACCCAACAAGGGTAGCTACACATAGATaGTCACACTCTATAGGCTGCCTGATCCTGGAACCA +
Preference number: 3 (lower is better)
Translates to: LRAHPTRVATHR*SHSIGCLILEP
Trigger: TGGTTCCAGGATCAGGCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTACCCTTGTTGGGTGGGCTCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 72 bp GTCTTGGTGAGACACGTGGCACAGCAAGGCTGTCAGTaGATGTGCATAAATTGTAGACCAGGTCCCACTATG +
Preference number: 3 (lower is better)
Translates to: VLVRHVAQQGCQ*MCINCRPGPTM
Trigger: CATAGTGGGACCTGGTCTACAATTTATGCACATGCACTGACAGCCTTGCTGTGCCACGTGTCTCACCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTGTCATCATGGGTATaGGAGGCCGATGGCTTTTCC +
Preference number: 3 (lower is better)
Translates to: SSITGKGESESWHDFITPLSSWV*EADGFS
Trigger: GGAAAAGCCATCGGCCTCCAATACCCATGATGACAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 72 bp GGTCCCAAGTATATCACAGTGCCTCTCTTAAGTCCCTaGCTGGGGATACGTCATTCACAGCAAGTGAAGACC +
Preference number: 3 (lower is better)
Translates to: GPKYITVPLLSP*LGIRHSQQVKT
Trigger: GGTCTTCACTTGCTGTGAATGACGTATCCCCAGTCAGGGACTTAAGAGAGGCACTGTGATATACTTGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 72 bp TTTTCCTTGTCTTGGGATTACACGGGCCAGCTAGCATaGCTGGTAATGTTCACCATGCTGTCCTGGGAAATG +
Preference number: 3 (lower is better)
Translates to: FSLSWDYTGQLA*LVMFTMLSWEM
Trigger: CATTTCCCAGGACAGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 72 bp GGAGACAAAAGTTCAAAAGGATGCCAACTAGTGGCATaGAATGCCACTCCTGGCCTGTGTAGTGCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: GDKSSKGCQLVA*NATPGLCSAAE
Trigger: TTCTGCTGCACTACACAGGCCAGGAGTGGCATTCCATGCCACTAGTTGGCATCCTTTTGAACTTTTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATGTGCACCCTGGAAGTaGTGGAATGTCCGTAATGAG +
Preference number: 3 (lower is better)
Translates to: SSITGKGESESWHDFITPCAPWK*WNVRNE
Trigger: CTCATTACGGACATTCCACAACTTCCAGGGTGCACA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 72 bp ACTCCCACTGTTTGGGGGCTATTCATCACTGATGAATaGAACTTCCACTCAGGAGGTTTCCCCGTGCACATA +
Preference number: 3 (lower is better)
Translates to: TPTVWGLFITDE*NFHSGGFPVHI
Trigger: TATGTGCACGGGGAAACCTCCTGAGTGGAAGTTTCATTCATCAGTGATGAATAGCCCCCAAACAGTGGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 72 bp CTGTGTAGTGCAGCAGAAGCAGACACCCCTGTTGGCTaGAGTTTGAGCAAACTGTCATACCTCACAGGAAAA +
Preference number: 3 (lower is better)
Translates to: LCSAAEADTPVG*SLSKLSYLTGK
Trigger: TTTTCCTGTGAGGTATGACAGTTTGCTCAAACTTCAGCCAACAGGGGTGTCTGCTTCTGCTGCACTACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 72 bp GGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATaGGCATGCCTACAGTCCCTACCAAAATACCCGAGC +
Preference number: 3 (lower is better)
Translates to: GFSAYCDNSKDL*ACLQSLPKYPS
Trigger: GCTCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTCCAAAGCCCTTAAATaGGGCCATTTGCCATTTAAC +
Preference number: 3 (lower is better)
Translates to: LVLGLHGPASMPGNVHHASKALK*GHLPFN
Trigger: GTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAATGTTTTCCTTGTCTaGGGATTACACGGGCCAGCT +
Preference number: 3 (lower is better)
Translates to: SSITGKGESESWHDFITPNVFLV*GLHGPA
Trigger: AGCTGGCCCGTGTAATCCCAAGACAAGGAAAACATT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAAACGAATGTTTTCCTaGTCTTGGGATTACACGGGC +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHKRMFS*SWDYTG
Trigger: GCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAGAGAAGGCACTGTTTaGGCACTAGCAAAAAGGACA +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHREGTV*ALAKRT
Trigger: TGTCCTTTTTGCTAGTGCCAAAACAGTGCCTTCTCT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGTCTGGGAGAGTCTGTaGGCTTATTTTAAGTCACTT +
Preference number: 3 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNVWESL*AYFKSL
Trigger: AAGTGACTTAAAATAAGCCAACAGACTCTCCCAGAC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTCTGGGAGAGTCTGTaGGCTTATTTTAAGTCACTT +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVWESL*AYFKSL
Trigger: AAGTGACTTAAAATAAGCCAACAGACTCTCCCAGAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTCCAAAGCCCTTAAATaGGGCCATTTGCCATTTAAC +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHSKALK*GHLPFN
Trigger: GTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCACATCAGTTGGGTTTaGTACCCACCTAATGACATA +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHHISWV*YPPNDI
Trigger: TATGTCATTAGGTGGGTACAAAACCCAACTGATGTG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAATGTAGGACTGCCATaGCCTTTTGGTGGTAATTCA +
Preference number: 3 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNNVGLP*PFGGNS
Trigger: TGAATTACCACCAAAAGGCAATGGCAGTCCTACATT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAATGTAGGACTGCCATaGCCTTTTGGTGGTAATTCA +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHNVGLP*PFGGNS
Trigger: TGAATTACCACCAAAAGGCAATGGCAGTCCTACATT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 72 bp ATGAGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTaGCATGATTTCATCACGCCAAGGTGTGATGTTCTG +
Preference number: 3 (lower is better)
Translates to: MSSITGKGESES*HDFITPRCDVL
Trigger: CAGAACATCACACCTTGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAAAACGAATGTTTTCCTaGTCTTGGGATTACACGGGC +
Preference number: 3 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRKRMFS*SWDYTG
Trigger: GCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCTCTTAAATGACACTTaGGCTTTCGTTCTCTCAATG +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHLLNDT*AFVLSM
Trigger: CATTGAGAGAACGAAAGCCAAAGTGTCATTTAAGAG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTGTTACCAGTTGGGTaGAGCAATAACAAAATGCAT +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVLPVG*SNNKMH
Trigger: ATGCATTTTGTTATTGCTCAACCCAACTGGTAACAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGTCTGGGAGAGTCTGTaGGCTTATTTTAAGTCACTT +
Preference number: 3 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRVWESL*AYFKSL
Trigger: AAGTGACTTAAAATAAGCCAACAGACTCTCCCAGAC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTGAAGGGTCTATTCTaGATTGGGTATAGAATCAAA +
Preference number: 3 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVKGLF*IGYRIK
Trigger: TTTGATTCTATACCCAATCAAGAATAGACCCTTCAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 72 bp GAAAATTCTGGGCTTCAGATTTTACCATGTGCACCCTaGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: ENSGLQILPCAP*KLWNVRNEFCV
Trigger: GACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATGGTAAAATCTGAAGCCCAGAATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTTAAATTGGGCCATTaGCCATTTAACAATGGAACA +
Preference number: 3 (lower is better)
Translates to: SSITGKGESESWHDFITPLKLGH*PFNNGT
Trigger: TGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAATGTTTTCCTTGTCTaGGGATTACACGGGCCAGCT +
Preference number: 3 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHNVFLV*GLHGPA
Trigger: AGCTGGCCCGTGTAATCCCAAGACAAGGAAAACATT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 72 bp TTATCCAACTCCTTCTCTCCAGTAAACCACGCAGCTTaGGAGAAAATTCTGGGCTTCAGATTTTACCATGTG +
Preference number: 3 (lower is better)
Translates to: LSNSFSPVNHAA*EKILGFRFYHV
Trigger: CACATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAGCTGCGTGGTTTACTGGAGAGAAGGAGTTGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 72 bp ATTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTaGCAACAGCAAGGATTTATGAGCATGCCTACAGTC +
Preference number: 3 (lower is better)
Translates to: IGYRIKRVFSVL*QQQGFMSMPTV
Trigger: GACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 72 bp GGCAAATTAGATCCAAAGCCCTTAAATTGGGCCATTTaGCATTTAACAATGGAACAGGCCGTTCCTATCAGA +
Preference number: 3 (lower is better)
Translates to: GKLDPKPLNWAI*HLTMEQAVPIR
Trigger: TCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGATCTAATTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGACTTAAATTGGGCCATTaGCCATTTAACAATGGAACA +
Preference number: 3 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRLKLGH*PFNNGT
Trigger: TGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAG...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAAACGAATGTTTTCCTaGTCTTGGGATTACACGGGC +
Preference number: 3 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHKRMFS*SWDYTG
Trigger: GCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 72 bp GTAATGGAAAAAGGAGGAATCATTCCACTAGTTGTGTaGTCTGGGAGAGTCTGTTGGCTTATTTTAAGTCAC +
Preference number: 3 (lower is better)
Translates to: VMEKGGIIPLVV*SGRVCWLILSH
Trigger: GTGACTTAAAATAAGCCAACAGACTCTCCCAGACCACACAACTAGTGGAATGATTCCTCCTTTTTCCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR TCA 72 bp TTGGAATTAAGGAGCCCAAACTACCTTACTTGCATTTaGAGTCTTTCACTTCATATCCTACCCCATCAGTCT +
Preference number: 3 (lower is better)
Translates to: LELRSPNYLTCI*SLSLHILPHQS
Trigger: AGACTGATGGGGTAGGATATGAAGTGAAAGACTTCAAATGCAAGTAAGGTAGTTTGGGCTCCTTAATTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CCA 72 bp GGAAAAAGGAGGAATCATTCCACTAGTTGTGTGGTCTaGGAGAGTCTGTTGGCTTATTTTAAGTCACTTTTT +
Preference number: 3 (lower is better)
Translates to: GKRRNHSTSCVV*ESLLAYFKSLF
Trigger: AAAAAGTGACTTAAAATAAGCCAACAGACTCTCCCAGACCACACAACTAGTGGAATGATTCCTCCTTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR-3UTR CAA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGTGAAGGGTCTATTCTaGATTGGGTATAGAATCAAA +
Preference number: 3 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHVKGLF*IGYRIK
Trigger: TTTGATTCTATACCCAATCAAGAATAGACCCTTCAC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR GCA 72 bp CTTCAAATTGAGCACAGTGGGCATAACAGTTTTAGCTaGCTATCACATTCTAAACAAGTTTCTTGGTTTCGT +
Preference number: 3 (lower is better)
Translates to: LQIEHSGHNSFS*LSHSKQVSWFR
Trigger: ACGAAACCAAGAAACTTGTTTAGAATGTGATAGGCAGCTAAAACTGTTATGCCCACTGTGCTCAATTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCCAAGAAGGCGGCGGTaGGCTGCCGGCTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCPRRRR*AAGCSA
Trigger: CGCGCTGCAGCCGGCAGCCCACCGCCGCCTTCTTGG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGACCCCGGCCCCAAGGGTaGTTCCAACGCCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGPRPQG*FQRPGQ
Trigger: TTGCCCTGGGCGTTGGAAGCACCCTTGGGGCCGGGG...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGGCCCGAGTCTGCCTTaGCCACCTCCCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNGPSLP*PPPQRG
Trigger: TCCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGGCCCGAGTCTGCCTTaGCCACCTCCCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQGPSLP*PPPQRG
Trigger: TCCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACCAAGAAGGCGGCGGTaGGCTGCCGGCTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVPRRRR*AAGCSA
Trigger: CGCGCTGCAGCCGGCAGCCCACCGCCGCCTTCTTGG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCCCCGGCCCCAAGGGTaGTTCCAACGCCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCPRPQG*FQRPGQ
Trigger: TTGCCCTGGGCGTTGGAAGCACCCTTGGGGCCGGGG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGGCCCGAGTCTGCCTTaGCCACCTCCCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMGPSLP*PPPQRG
Trigger: TCCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAGGACACCACGATGCTaGGGCCCGAGTCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHARTPRC*GPSLPW
Trigger: CCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTCTGACGAAGGCGACTaGGGCTGGGTTGGGGTCGCG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQSDEGD*GWVGVA
Trigger: CGCGACCCCAACCCAGCCCCAGTCGCCTTCGTCAGA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522656.5
CDS-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGGAAGGACACCACGATaGTGGGGCCCGAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHGRTPR*WGPSLP
Trigger: AGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGGAAGGACACCACGATaGTGGGGCCCGAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQGRTPR*WGPSLP
Trigger: AGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGGCCCGAGTCTGCCTTaGCCACCTCCCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVGPSLP*PPPQRG
Trigger: TCCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAGGACACCACGATGCTaGGGCCCGAGTCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQRTPRC*GPSLPW
Trigger: CCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGATCAGAGAGTCTCCTGTaGGGCTGGGTTGGGGTCGCG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGSESLL*GWVGVA
Trigger: CGCGACCCCAACCCAGCCCCACAGGAGACTCTCTGA...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTCAGAGAGTCTCCTGTaGGGCTGGGTTGGGGTCGCG +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNSESLL*GWVGVA
Trigger: CGCGACCCCAACCCAGCCCCACAGGAGACTCTCTGA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACGACTGGGGCTGGGTTaGGGTCGCGCCAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVRLGLG*GRAKKA
Trigger: CGCCTTCTTGGCGCGACCCCAACCCAGCCCCAGTCG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522656.5
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGAAGGCGACTGGGGCTaGGTTGGGGTCGCGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCEGDWG*VGVAPR
Trigger: TCTTGGCGCGACCCCAACCCAGCCCCAGTCGCCTTC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522656.5
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGAGGCCAGCCATCACTaGAGCCAGGGCAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGEASHH*SQGSNE
Trigger: CTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGAGGCCAGCCATCACTaGAGCCAGGGCAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQEASHH*SQGSNE
Trigger: CTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGTCTCTGCAGCATGGTaGCCTGGGACTCACTCTTCG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAVSAAW*PGTHSS
Trigger: CGAAGAGTGAGTCCCAGGTCACCATGCTGCAGAGAC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGAGGGTCCGCATGCTaGAGCCCTGTCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNRGSAC*SPVSAA
Trigger: TGCTGCAGAGACAGGGCTTCAGCATGCGGACCCTCT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAGGCCTCCAGCCTGGTaGTGGCATGAACTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHARPPAW*WHELRK
Trigger: CTTACGGAGTTCATGCCATCACCAGGCTGGAGGCCT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCCAACTGGGTCTTGGTaGGACACGTGGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAPTGSW*DTWHSK
Trigger: CTTGCTGTGCCACGTGTCTCACCAAGACCCAGTTGG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGGAAGGACACCACGATaGTGGGGCCCGAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLGRTPR*WGPSLP
Trigger: AGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAGGACACCACGATGCTaGGGCCCGAGTCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCRTPRC*GPSLPW
Trigger: CCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCCCCTGCAGTCAACGTaGCAGCAACTGGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQPLQST*QQLVTA
Trigger: GGCAGTCACCAGTTGCTGCCACGTTGACTGCAGGGG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCAACGCCCAGGGCAATaGGGTCCATGGTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQQRPGQ*GPWWIS
Trigger: GCTTATCCACCATGGACCTCATTGCCCTGGGCGTTG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAAGCCAGGGCAGCAATaGGGAAGGACACCACGATGC +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGKPGQQ*GRTPRC
Trigger: GCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGAGGCCAGCCATCACTaGAGCCAGGGCAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCEASHH*SQGSNE
Trigger: CTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGTCTCTGCAGCATGGTaGCCTGGGACTCACTCTTCG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGVSAAW*PGTHSS
Trigger: CGAAGAGTGAGTCCCAGGTCACCATGCTGCAGAGAC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAGAGGGTCCGCATGCTaGAGCCCTGTCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMRGSAC*SPVSAA
Trigger: TGCTGCAGAGACAGGGCTTCAGCATGCGGACCCTCT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGGCCTCCAGCCTGGTaGTGGCATGAACTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNRPPAW*WHELRK
Trigger: CTTACGGAGTTCATGCCATCACCAGGCTGGAGGCCT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAGGCCTCCAGCCTGGTaGTGGCATGAACTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQRPPAW*WHELRK
Trigger: CTTACGGAGTTCATGCCATCACCAGGCTGGAGGCCT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCTTTCCCTCTTTGCATaGTGCTGCTGTAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHALSLFA*CCCSPL
Trigger: GAGGGGGCTACAGCAGCATCATGCAAAGAGGGAAAG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGCGACAGGAGAAACTTaGTGTCGCAAACCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQATGET*CRKPVG
Trigger: CCCCACCGGTTTGCGACAGCAAGTTTCTCCTGTCGC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGCGACAGGAGAAACTTaGTGTCGCAAACCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNATGET*CRKPVG
Trigger: CCCCACCGGTTTGCGACAGCAAGTTTCTCCTGTCGC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR GCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGGAAGGACACCACGATaGTGGGGCCCGAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRGRTPR*WGPSLP
Trigger: AGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCTGAAGCCCTGTCTCTaGAGCATGGTGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLKPCL*SMVTWD
Trigger: GTCCCAGGTCACCATGCTGCAGAGACAGGGCTTCAG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGCAGCCTCACTCTCCTaGGCTCAAGCGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCAASLS*AQAILP
Trigger: TGGGAGGATCGCTTGAGCCCAGGAGAGTGAGGCTGC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCTCCCTCTGTCATCATaGGTATTGGAGGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHALPLSS*VLEADG
Trigger: GCCATCGGCCTCCAATACCCATGATGACAGAGGGAG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCCCCTGCAGTCAACGTaGCAGCAACTGGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCPLQST*QQLVTA
Trigger: GGCAGTCACCAGTTGCTGCCACGTTGACTGCAGGGG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
3UTR CAA 72 bp GGCAAGGCTCAAGTGCTCCCTCTGTCATCATGGGTATaGGAGGCCGATGGCTTTTCCTTATGCTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: GKAQVLPLSSWV*EADGFSLCFLL
Trigger: TAGCAGGAAGCATAAGGAAAAGCCATCGGCCTCCAATACCCATGATGACAGAGGGAGCACTTGAGCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCAACGCCCAGGGCAATaGGGTCCATGGTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLQRPGQ*GPWWIS
Trigger: GCTTATCCACCATGGACCTCATTGCCCTGGGCGTTG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACAACGCCCAGGGCAATaGGGTCCATGGTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPQRPGQ*GPWWIS
Trigger: GCTTATCCACCATGGACCTCATTGCCCTGGGCGTTG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCAACGCCCAGGGCAATaGGGTCCATGGTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCQRPGQ*GPWWIS
Trigger: GCTTATCCACCATGGACCTCATTGCCCTGGGCGTTG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAAGCCAGGGCAGCAATaGGGAAGGACACCACGATGC +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLKPGQQ*GRTPRC
Trigger: GCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAAGCCAGGGCAGCAATaGGGAAGGACACCACGATGC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCKPGQQ*GRTPRC
Trigger: GCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGTCTCTGCAGCATGGTaGCCTGGGACTCACTCTTCG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMVSAAW*PGTHSS
Trigger: CGAAGAGTGAGTCCCAGGTCACCATGCTGCAGAGAC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGTCTCTGCAGCATGGTaGCCTGGGACTCACTCTTCG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCVSAAW*PGTHSS
Trigger: CGAAGAGTGAGTCCCAGGTCACCATGCTGCAGAGAC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAAGAGGGTCCGCATGCTaGAGCCCTGTCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRRGSAC*SPVSAA
Trigger: TGCTGCAGAGACAGGGCTTCAGCATGCGGACCCTCT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAGAGGGTCCGCATGCTaGAGCCCTGTCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVRGSAC*SPVSAA
Trigger: TGCTGCAGAGACAGGGCTTCAGCATGCGGACCCTCT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGCTCACGAGAGAAGCTaGCTGCTGTGTTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNAHERS*LLCWQK
Trigger: CTTCTGCCAACACAGCAGTCAGCTTCTCTCGTGAGC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAGGCCTCCAGCCTGGTaGTGGCATGAACTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCRPPAW*WHELRK
Trigger: CTTACGGAGTTCATGCCATCACCAGGCTGGAGGCCT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGCTGCCTCCAGATGGTaGGAACGATGGCAACGAAGA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQAASRW*ERWQRR
Trigger: TCTTCGTTGCCATCGTTCTCACCATCTGGAGGCAGC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTCTCGGAACACACCCTaGTTTAAGAGGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHASRNTP*FKRREG
Trigger: GCCTTCCCTCCTCTTAAATCAGGGTGTGTTCCGAGA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCAGCCAGCCCTTCTATaGGTCACAGAGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCQPALL*VTEVPW
Trigger: CCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACAGCCAGCCCTTCTATaGGTCACAGAGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPQPALL*VTEVPW
Trigger: CCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCCAACTGGGTCTTGGTaGGACACGTGGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLPTGSW*DTWHSK
Trigger: CTTGCTGTGCCACGTGTCTCACCAAGACCCAGTTGG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGCCCAGAAGACTTGTTaGCAAGGCGCAGAGAGAACC +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNAQKTC*QGAERT
Trigger: GGTTCTCTCTGCGCCTTGTCAACAAGTCTTCTGGGC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGCCCAGAAGACTTGTTaGCAAGGCGCAGAGAGAACC +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHAQKTC*QGAERT
Trigger: GGTTCTCTCTGCGCCTTGTCAACAAGTCTTCTGGGC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGATGAGAACACAGGCTaGCACCAGAGAGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHADENTG*HQRVGH
Trigger: ATGGCCTACTCTCTGGTGGCAGCCTGTGTTCTCATC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTGAAGCCCTGTCTCTaGAGCATGGTGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPLKPCL*SMVTWD
Trigger: GTCCCAGGTCACCATGCTGCAGAGACAGGGCTTCAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAGCTCTGACTACATGTaGATGCCACCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHASSDYM*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCACATGTAGTCAGAGCT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTCACACTCTATAGGCTaGCTGATCCTGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHASHSIG*LILEPA
Trigger: GGCTGGTTCCAGGATCAGGCAGCCTATAGAGTGTGA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGCAGCAACTGGTGACTaGCTCTTACTCACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAAATGD*LLLTLA
Trigger: TGCCAGAGTGAGTAAGAGGCAGTCACCAGTTGCTGC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGGCCCGAGTCTGCCTTaGCCACCTCCCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHGPSLP*PPPQRG
Trigger: TCCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAGGACACCACGATGCTaGGGCCCGAGTCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSRTPRC*GPSLPW
Trigger: CCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATATGCAGACCCCGTCTTaGGAACACGGGCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHMQTPS*EHGPQI
Trigger: AATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCAT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGATGCAGACCCCGTCTTaGGAACACGGGCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQMQTPS*EHGPQI
Trigger: AATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCAT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTTCACCATGCTGTCCTaGGAAATGTCACCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAFTMLS*EMSPSL
Trigger: GAGGCTGGGTGACATTTCCCAGGACAGCATGGTGAA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCCGGTCTTAAACTCCTaGGCTCAAGCGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAPVLNS*AQAISL
Trigger: CAAGCTGATCGCTTGAGCCCAGGAGTTTAAGACCGG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCTCCCTCTGTCATCATaGGTATTGGAGGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLPLSS*VLEADG
Trigger: GCCATCGGCCTCCAATACCCATGATGACAGAGGGAG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACCCTGTGGGGCTGGGTTaGGGTCGCGCCAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHPVGLG*GRAKKA
Trigger: CGCCTTCTTGGCGCGACCCCAACCCAGCCCCACAGG...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACAACGCCCAGGGCAATaGGGTCCATGGTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVQRPGQ*GPWWIS
Trigger: GCTTATCCACCATGGACCTCATTGCCCTGGGCGTTG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAAGCCAGGGCAGCAATaGGGAAGGACACCACGATGC +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVKPGQQ*GRTPRC
Trigger: GCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCCAGAGAGTAGGCCATaGGTGTGCCAATGGACATCA +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHPESRP*VCQWTS
Trigger: TGATGTCCATTGGCACACTCATGGCCTACTCTCTGG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCCAGAGAGTAGGCCATaGGTGTGCCAATGGACATCA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNPESRP*VCQWTS
Trigger: TGATGTCCATTGGCACACTCATGGCCTACTCTCTGG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAGAGGGTCCGCATGCTaGAGCCCTGTCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSRGSAC*SPVSAA
Trigger: TGCTGCAGAGACAGGGCTTCAGCATGCGGACCCTCT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGCTCACGAGAGAAGCTaGCTGCTGTGTTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCAHERS*LLCWQK
Trigger: CTTCTGCCAACACAGCAGTCAGCTTCTCTCGTGAGC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAAGGCCTCCAGCCTGGTaGTGGCATGAACTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRRPPAW*WHELRK
Trigger: CTTACGGAGTTCATGCCATCACCAGGCTGGAGGCCT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGCTGCCTCCAGATGGTaGGAACGATGGCAACGAAGA +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPAASRW*ERWQRR
Trigger: TCTTCGTTGCCATCGTTCTCACCATCTGGAGGCAGC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGCTGCCTCCAGATGGTaGGAACGATGGCAACGAAGA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCAASRW*ERWQRR
Trigger: TCTTCGTTGCCATCGTTCTCACCATCTGGAGGCAGC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAAGGCTACTTTTTGCTaGTTCTGGGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQKATFC*FWGCLQ
Trigger: CTGGAGGCAGCCCCAGAATCAGCAAAAAGTAGCCTT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCTTTCCCTCTTTGCATaGTGCTGCTGTAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMLSLFA*CCCSPL
Trigger: GAGGGGGCTACAGCAGCATCATGCAAAGAGGGAAAG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTCTCGGAACACACCCTaGTTTAAGAGGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQSRNTP*FKRREG
Trigger: GCCTTCCCTCCTCTTAAATCAGGGTGTGTTCCGAGA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACCAACTGGGTCTTGGTaGGACACGTGGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVPTGSW*DTWHSK
Trigger: CTTGCTGTGCCACGTGTCTCACCAAGACCCAGTTGG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAACCTGTTGGCAATATaGCGCTCTTTCCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHANLLAI*RSFPTG
Trigger: CCCAGTTGGGAAAGAGCGTCATATTGCCAACAGGTT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAATCATTCTGACGTCTaGCGAAGGCGACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCNHSDV*RRRLGL
Trigger: CAGCCCCAGTCGCCTTCGTCAGACGTCAGAATGATT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522656.5
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGCAGAGAGAACCAGCTaGGACGACATATTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQAERTS*DDIFGR
Trigger: CCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACTGAAGCCCTGTCTCTaGAGCATGGTGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLKPCL*SMVTWD
Trigger: GTCCCAGGTCACCATGCTGCAGAGACAGGGCTTCAG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATACGAGAGAAGCTGACTaGTGTGTTGGCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHTREAD*CVGRRE
Trigger: CTCCCTTCTGCCAACACAGCAGTCAGCTTCTCTCGT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAACGAGAGAAGCTGACTaGTGTGTTGGCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGTREAD*CVGRRE
Trigger: CTCCCTTCTGCCAACACAGCAGTCAGCTTCTCTCGT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACACGGGCCAGCTAGCATaGCTGGTAATGTTCACCATG +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNTGQLA*LVMFTM
Trigger: CATGGTGAACATTACCAGGCATGCTAGCTGGCCCGT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTAGAGACAGGGTCTTaGTATGCTACTCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVETGS*YATQAG
Trigger: ACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAGCTCTGACTACATGTaGATGCCACCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQSSDYM*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCACATGTAGTCAGAGCT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGTAATCTCAGCTCACTaGAGCCTCACTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMVISAH*SLTLLG
Trigger: GCCCAGGAGAGTGAGGCTGCAGTGAGCTGAGATTAC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTTGCCCAGGCTAGAGTaGAGTGGCGTAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQLPRLE*SGVISA
Trigger: AGCTGAGATTACGCCACTGCACTCTAGCCTGGGCAA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTTGCCCAGGCTAGAGTaGAGTGGCGTAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHLPRLE*SGVISA
Trigger: AGCTGAGATTACGCCACTGCACTCTAGCCTGGGCAA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTCACACTCTATAGGCTaGCTGATCCTGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQSHSIG*LILEPA
Trigger: GGCTGGTTCCAGGATCAGGCAGCCTATAGAGTGTGA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTCACACTCTATAGGCTaGCTGATCCTGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNSHSIG*LILEPA
Trigger: GGCTGGTTCCAGGATCAGGCAGCCTATAGAGTGTGA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAGCAGAAATGACCCCTaGAGTCAACGTGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGSRNDP*SQRGSN
Trigger: GTTGCTGCCACGTTGACTGCAGGGGTCATTTCTGCT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGGCTCACTGCTTTCCTaGTGGTCTTCAGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHGSLLS*WSSESL
Trigger: GAGACTCTCTGAAGACCAGCAGGAAAGCAGTGAGCC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCATGCAGACCCCGTCTTaGGAACACGGGCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCMQTPS*EHGPQI
Trigger: AATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCAT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGACTGCGACGACATATTTaGCAGGACCCCATCCCACAT +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGLRRHI*QDPIPH
Trigger: ATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAG...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCTGCGACGACATATTTaGCAGGACCCCATCCCACAT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQLRRHI*QDPIPH
Trigger: ATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTGCAGCATGGTGACCTaGGACTCACTCTTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNCSMVT*DSLFEV
Trigger: AACCTCGAAGAGTGAGTCCCAGGTCACCATGCTGCA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTGCAGCATGGTGACCTaGGACTCACTCTTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHCSMVT*DSLFEV
Trigger: AACCTCGAAGAGTGAGTCCCAGGTCACCATGCTGCA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGATGCAGCATGGTGACCTaGGACTCACTCTTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGCSMVT*DSLFEV
Trigger: AACCTCGAAGAGTGAGTCCCAGGTCACCATGCTGCA...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGTGCCAACTAGTGGCATaGAATGCCACTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMCQLVA*NATPGL
Trigger: CAGGCCAGGAGTGGCATTCCATGCCACTAGTTGGCA...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATGCCAACTAGTGGCATaGAATGCCACTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPCQLVA*NATPGL
Trigger: CAGGCCAGGAGTGGCATTCCATGCCACTAGTTGGCA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCAGTCGGAAAAGGTGTaGCAGCAGCAAGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAQSEKV*QQQVNR
Trigger: CCTGTTTACTTGCTGCTGCCACACCTTTTCCGACTG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCTCCCTCTGTCATCATaGGTATTGGAGGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMLPLSS*VLEADG
Trigger: GCCATCGGCCTCCAATACCCATGATGACAGAGGGAG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAAGACCCAGCGATCATaGCAGTGGCATCAACCATGG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQKTQRS*QWHQPW
Trigger: CCATGGTTGATGCCACTGCCATGATCGCTGGGTCTT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATATCCTGGAACCAGCCTaGGGCCCTGATTATGATCTC +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHILEPA*GPDYDL
Trigger: GAGATCATAATCAGGGCCCCAGGCTGGTTCCAGGAT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGATCCTGGAACCAGCCTaGGGCCCTGATTATGATCTC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQILEPA*GPDYDL
Trigger: GAGATCATAATCAGGGCCCCAGGCTGGTTCCAGGAT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGACGCTCTTTCCCAACTaGGTCTTGGTGAGACACGTG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQTLFPN*VLVRHV
Trigger: CACGTGTCTCACCAAGACCCAGTTGGGAAAGAGCGT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATACGCTCTTTCCCAACTaGGTCTTGGTGAGACACGTG +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHTLFPN*VLVRHV
Trigger: CACGTGTCTCACCAAGACCCAGTTGGGAAAGAGCGT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAGCCATCCCGGGCCATaGCAAACAGAATTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPSHPGP*QTEFGV
Trigger: TACCCCGAATTCTGTTTGCCATGGCCCGGGATGGCT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTGCAAGGAATCATTCTaGCGTCTGACGAAGGCGACA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNCKESF*RLTKAT
Trigger: TGTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTCCAAGAAGACTTGTTaGCAAGGCGCAGAGAGAACC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQSKKTC*QGAERT
Trigger: GGTTCTCTCTGCGCCTTGTCAACAAGTCTTCTTGGA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCCAGAGAGTAGGCCATaGGTGTGCCAATGGACATCA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCPESRP*VCQWTS
Trigger: TGATGTCCATTGGCACACTCATGGCCTACTCTCTGG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGCTCACGAGAGAAGCTaGCTGCTGTGTTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRAHERS*LLCWQK
Trigger: CTTCTGCCAACACAGCAGTCAGCTTCTCTCGTGAGC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAAGGCTACTTTTTGCTaGTTCTGGGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMKATFC*FWGCLQ
Trigger: CTGGAGGCAGCCCCAGAATCAGCAAAAAGTAGCCTT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAGAGAAACAAAGAAGTaGACTCTGGGCCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGRETKK*TLGLTR
Trigger: CCTCGTCAGGCCCAGAGTTCACTTCTTTGTTTCTCT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAGAGAAACAAAGAAGTaGACTCTGGGCCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHRETKK*TLGLTR
Trigger: CCTCGTCAGGCCCAGAGTTCACTTCTTTGTTTCTCT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACTTTCCCTCTTTGCATaGTGCTGCTGTAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLSLFA*CCCSPL
Trigger: GAGGGGGCTACAGCAGCATCATGCAAAGAGGGAAAG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCACAGCCAGCCCTTCTATaGGTCACAGAGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSQPALL*VTEVPW
Trigger: CCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTG...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACCATCAAAGCAGAAATaGCCCCTGCAGTCAACGTGG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPPSKQK*PLQSTW
Trigger: CCACGTTGACTGCAGGGGTCATTTCTGCTTTGATGG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAATCATTCTGACGTCTaGCGAAGGCGACCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGNHSDV*RRRPVR
Trigger: CCTTACAGGTCGCCTTCGTCAGACGTCAGAATGATT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494857.6
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCTGCAAGGAATCATTCTaGCGTCTGACGAAGGCGACC +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLCKESF*RLTKAT
Trigger: GGTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCA...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494857.6
CDS-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGCGACAGGAGAAACTTaGTGTCGCAAACCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSATGET*CRKPVG
Trigger: CCCCACCGGTTTGCGACAGCAAGTTTCTCCTGTCGC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGGAAGGACACCACGATaGTGGGGCCCGAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHGRTPR*WGPSLP
Trigger: AGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGCAGAGAGAACCAGCTaGGACGACATATTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPAERTS*DDIFGR
Trigger: CCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGCAGAGAGAACCAGCTaGGACGACATATTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMAERTS*DDIFGR
Trigger: CCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGCAGAGAGAACCAGCTaGGACGACATATTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCAERTS*DDIFGR
Trigger: CCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGACGAGAGAAGCTGACTaGTGTGTTGGCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMTREAD*CVGRRE
Trigger: CTCCCTTCTGCCAACACAGCAGTCAGCTTCTCTCGT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCACGAGAGAAGCTGACTaGTGTGTTGGCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCTREAD*CVGRRE
Trigger: CTCCCTTCTGCCAACACAGCAGTCAGCTTCTCTCGT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCACGGGCCAGCTAGCATaGCTGGTAATGTTCACCATG +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLTGQLA*LVMFTM
Trigger: CATGGTGAACATTACCAGGCATGCTAGCTGGCCCGT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGTTCTGTGTCATGGATaGTATAACGCTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAVLCHG*YNASSQ
Trigger: CTGGCTGCTAGCGTTATAGCATCCATGACACAGAAC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGTAGAGACAGGGTCTTaGTATGCTACTCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLVETGS*YATQAG
Trigger: ACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTAC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGTAGAGACAGGGTCTTaGTATGCTACTCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCVETGS*YATQAG
Trigger: ACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTAC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAGCTCTGACTACATGTaGATGCCACCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCSSDYM*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCACATGTAGTCAGAGCT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGTAATCTCAGCTCACTaGAGCCTCACTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRVISAH*SLTLLG
Trigger: GCCCAGGAGAGTGAGGCTGCAGTGAGCTGAGATTAC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTCACACTCTATAGGCTaGCTGATCCTGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCSHSIG*LILEPA
Trigger: GGCTGGTTCCAGGATCAGGCAGCCTATAGAGTGTGA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAGCAGAAATGACCCCTaGAGTCAACGTGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMSRNDP*SQRGSN
Trigger: GTTGCTGCCACGTTGACTGCAGGGGTCATTTCTGCT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGGCTCACTGCTTTCCTaGTGGTCTTCAGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPGSLLS*WSSESL
Trigger: GAGACTCTCTGAAGACCAGCAGGAAAGCAGTGAGCC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGCTGTCGCAAACCGGTaGGGCAGGTGTTCCAATAAA +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLAVANR*GRCSNK
Trigger: TTTATTGGAACACCTGCCCCACCGGTTTGCGACAGC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGCTGTCGCAAACCGGTaGGGCAGGTGTTCCAATAAA +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPAVANR*GRCSNK
Trigger: TTTATTGGAACACCTGCCCCACCGGTTTGCGACAGC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAGGACACCACGATGCTaGGGCCCGAGTCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHRTPRC*GPSLPW
Trigger: CCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAATGCAGACCCCGTCTTaGGAACACGGGCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRMQTPS*EHGPQI
Trigger: AATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCAT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCTGCGACGACATATTTaGCAGGACCCCATCCCACAT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCLRRHI*QDPIPH
Trigger: ATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTGCGACGACATATTTaGCAGGACCCCATCCCACAT +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPLRRHI*QDPIPH
Trigger: ATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTCTTCGAGGTTACCCTaGGAGACGATCCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCSSRLP*ETIPDH
Trigger: ATGGTCTGGGATCGTCTCCCAGGGTAACCTCGAAGA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTGCAGCATGGTGACCTaGGACTCACTCTTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCCSMVT*DSLFEV
Trigger: AACCTCGAAGAGTGAGTCCCAGGTCACCATGCTGCA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCATGAACTCCGTAAGTaGTCAAGACACTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHHELRK*SRHSGP
Trigger: TGGGCCTGAGTGTCTTGACCACTTACGGAGTTCATG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGACATGAACTCCGTAAGTaGTCAAGACACTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGHELRK*SRHSGP
Trigger: TGGGCCTGAGTGTCTTGACCACTTACGGAGTTCATG...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCTTCACCATGCTGTCCTaGGAAATGTCACCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLFTMLS*EMSPSL
Trigger: GAGGCTGGGTGACATTTCCCAGGACAGCATGGTGAA...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGCACCCTGGAAGTTGTaGAATGTCCGTAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAAPWKL*NVRNEF
Trigger: GAACTCATTACGGACATTCCACAACTTCCAGGGTGC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCCGGTCTTAAACTCCTaGGCTCAAGCGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMPVLNS*AQAISL
Trigger: CAAGCTGATCGCTTGAGCCCAGGAGTTTAAGACCGG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCCGGTCTTAAACTCCTaGGCTCAAGCGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCPVLNS*AQAISL
Trigger: CAAGCTGATCGCTTGAGCCCAGGAGTTTAAGACCGG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAAGACCCAGCGATCATaGCAGTGGCATCAACCATGG +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLKTQRS*QWHQPW
Trigger: CCATGGTTGATGCCACTGCCATGATCGCTGGGTCTT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCATCCTGGAACCAGCCTaGGGCCCTGATTATGATCTC +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLILEPA*GPDYDL
Trigger: GAGATCATAATCAGGGCCCCAGGCTGGTTCCAGGAT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAATCCTGGAACCAGCCTaGGGCCCTGATTATGATCTC +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPILEPA*GPDYDL
Trigger: GAGATCATAATCAGGGCCCCAGGCTGGTTCCAGGAT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAACGCTCTTTCCCAACTaGGTCTTGGTGAGACACGTG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPTLFPN*VLVRHV
Trigger: CACGTGTCTCACCAAGACCCAGTTGGGAAAGAGCGT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCACGCTCTTTCCCAACTaGGTCTTGGTGAGACACGTG +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLTLFPN*VLVRHV
Trigger: CACGTGTCTCACCAAGACCCAGTTGGGAAAGAGCGT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGATCACTGCTTTCCTGCTaGTCTTCAGAGAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGSLLSC*SSESLL
Trigger: CAGGAGACTCTCTGAAGACCAGCAGGAAAGCAGTGA...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTTGCTAGTTTCGTGGTaGGACATCTGCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHALLVSW*DICSFC
Trigger: ACAGAAAGAGCAGATGTCTCACCACGAAACTAGCAA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCTGCAAGGAATCATTCTaGCGTCTGACGAAGGCGACA +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLCKESF*RLTKAT
Trigger: TGTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCA...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAGAGGCCAGCCATCACTaGAGCCAGGGCAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLEASHH*SQGSNE
Trigger: CTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTC...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTCCAAGAAGACTTGTTaGCAAGGCGCAGAGAGAACC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCSKKTC*QGAERT
Trigger: GGTTCTCTCTGCGCCTTGTCAACAAGTCTTCTTGGA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTTTGAGCTAGACATTTaGAAAGCAACCCATCCTCCG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAFELDI*KATHPP
Trigger: CGGAGGATGGGTTGCTTTTCAAATGTCTAGCTCAAA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000004531.14
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTTTTCATCTCTCAGATaGCCCTCCAGGCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQFSSLR*PSRLCL
Trigger: TAGACACAGCCTGGAGGGTCATCTGAGAGATGAAAA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGATTTTCATCTCTCAGATaGCCCTCCAGGCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGFSSLR*PSRLCL
Trigger: TAGACACAGCCTGGAGGGTCATCTGAGAGATGAAAA...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTGCAGGGGGCATAGATaGAACCTCTTTACATTCAGT +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHACRGHR*NLFTFS
Trigger: ACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGACACCCCTGTTGGCTaGAGTTTGAGCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCDTPVG*SLSKLS
Trigger: TGACAGTTTGCTCAAACTTCAGCCAACAGGGGTGTC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCCTCTCTTAAGTCCCTaGCTGGGGATACGTCATTCA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCPLLSP*LGIRHS
Trigger: TGAATGACGTATCCCCAGTCAGGGACTTAAGAGAGG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAGAGAAACAAAGAAGTaGACTCTGGGCCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMRETKK*TLGLTR
Trigger: CCTCGTCAGGCCCAGAGTTCACTTCTTTGTTTCTCT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCACTTTCCCTCTTTGCATaGTGCTGCTGTAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSLSLFA*CCCSPL
Trigger: GAGGGGGCTACAGCAGCATCATGCAAAGAGGGAAAG...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGTAAACCACGCAGCTTaGGAGAAAATTCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNVNHAA*EKILGF
Trigger: GAAGCCCAGAATTTTCTCTCAAGCTGCGTGGTTTAC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGTAAACCACGCAGCTTaGGAGAAAATTCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGVNHAA*EKILGF
Trigger: GAAGCCCAGAATTTTCTCTCAAGCTGCGTGGTTTAC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCATCACGCCAAGGTGTaGTGTTCTGTAATCTCGGAA +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHHHAKV*CSVISE
Trigger: TTCCGAGATTACAGAACATCACACCTTGGCGTGATG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGTCAGAATCTTGGCATaGTTTCATCACGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQVRILA*FHHAKV
Trigger: CACCTTGGCGTGATGAAATCATGCCAAGATTCTGAC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAACCTGTTGGCAATATaGCGCTCTTTCCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMNLLAI*RSFPTG
Trigger: CCCAGTTGGGAAAGAGCGTCATATTGCCAACAGGTT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTGCAAGGAATCATTCTaGCGTCTGACGAAGGCGACT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCCKESF*RLTKAT
Trigger: AGTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522656.5
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGTAGGTGTACAAATATaGAGACCCCGTCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGVGVQI*RPRLGN
Trigger: GTTCCCAAGACGGGGTCTGCATATTTGTACACCTAC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGTAGGTGTACAAATATaGAGACCCCGTCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQVGVQI*RPRLGN
Trigger: GTTCCCAAGACGGGGTCTGCATATTTGTACACCTAC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGAAGTTCATCAAAGGTaGCACTCCAGGCTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNEVHQR*HSRLLQ
Trigger: TTGCAAGAGCCTGGAGTGGCACCTTTGATGAACTTC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGATGAGAACACAGGCTaGCACCAGAGAGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRDENTG*HQRVGH
Trigger: ATGGCCTACTCTCTGGTGGCAGCCTGTGTTCTCATC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGATGAGAACACAGGCTaGCACCAGAGAGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVDENTG*HQRVGH
Trigger: ATGGCCTACTCTCTGGTGGCAGCCTGTGTTCTCATC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAACGGGCCAGCTAGCATaGCTGGTAATGTTCACCATG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVTGQLA*LVMFTM
Trigger: CATGGTGAACATTACCAGGCATGCTAGCTGGCCCGT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGTTCTGTGTCATGGATaGTATAACGCTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNVLCHG*YNASSQ
Trigger: CTGGCTGCTAGCGTTATAGCATCCATGACACAGAAC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGTTCTGTGTCATGGATaGTATAACGCTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGVLCHG*YNASSQ
Trigger: CTGGCTGCTAGCGTTATAGCATCCATGACACAGAAC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATTGCCCAGGCTAGAGTaGAGTGGCGTAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLPRLE*SGVISA
Trigger: AGCTGAGATTACGCCACTGCACTCTAGCCTGGGCAA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATCTTCGAGGTTACCCTaGGAGACGATCCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRSSRLP*ETIPDH
Trigger: ATGGTCTGGGATCGTCTCCCAGGGTAACCTCGAAGA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATCTTCGAGGTTACCCTaGGAGACGATCCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVSSRLP*ETIPDH
Trigger: ATGGTCTGGGATCGTCTCCCAGGGTAACCTCGAAGA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATGCAGCATGGTGACCTaGGACTCACTCTTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRCSMVT*DSLFEV
Trigger: AACCTCGAAGAGTGAGTCCCAGGTCACCATGCTGCA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAGCAGACACCCCTGTTaGCTGAAGTTTGAGCAAACT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQSRHPC*LKFEQT
Trigger: AGTTTGCTCAAACTTCAGCCAACAGGGGTGTCTGCT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATGCCAACTAGTGGCATaGAATGCCACTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSCQLVA*NATPGL
Trigger: CAGGCCAGGAGTGGCATTCCATGCCACTAGTTGGCA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTACTAGTTGTGTGGTCTaGGAGAGTCTGTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHATSCVV*ESLLAY
Trigger: ATAAGCCAACAGACTCTCCCAGACCACACAACTAGT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATATTCCACTAGTTGTGTaGTCTGGGAGAGTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHIPLVV*SGRVCW
Trigger: CCAACAGACTCTCCCAGACCACACAACTAGTGGAAT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGCACCCTGGAAGTTGTaGAATGTCCGTAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQAPWKL*NVRNEF
Trigger: GAACTCATTACGGACATTCCACAACTTCCAGGGTGC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGCACCCTGGAAGTTGTaGAATGTCCGTAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHAPWKL*NVRNEF
Trigger: GAACTCATTACGGACATTCCACAACTTCCAGGGTGC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTTACCATGTGCACCCTaGAAGTTGTGGAATGTCCGT +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLPCAP*KLWNVR
Trigger: ACGGACATTCCACAACTTCCAGGGTGCACATGGTAA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCAGTCGGAAAAGGTGTaGCAGCAGCAAGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMQSEKV*QQQVNR
Trigger: CCTGTTTACTTGCTGCTGCCACACCTTTTCCGACTG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAGCAGCCTCACTCTCCTaGGCTCAAGCGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLAASLS*AQAILP
Trigger: TGGGAGGATCGCTTGAGCCCAGGAGAGTGAGGCTGC...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCACTCCCTCTGTCATCATaGGTATTGGAGGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSLPLSS*VLEADG
Trigger: GCCATCGGCCTCCAATACCCATGATGACAGAGGGAG...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGGAGAGTCAGAATCTTaGCATGATTTCATCACGCCA +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAGESES*HDFITP
Trigger: TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAGTCTCCTGTGGGGCTaGGTTGGGGTCGCGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLSLLWG*VGVAPR
Trigger: TCTTGGCGCGACCCCAACCCAGCCCCACAGGAGACT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494857.6
3UTR CAA 72 bp GGAAGACCCATGAGGAAAACGAATGTTTTCCTTGTCTaGGGATTACACGGGCCAGCTAGCATGCCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GRPMRKTNVFLV*GLHGPASMPGN
Trigger: ATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTTTCCTCATGGGTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAATCATTCTGACGTCTaGCGAAGGCGACAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCNHSDV*RRRQEK
Trigger: TTTCTCCTGTCGCCTTCGTCAGACGTCAGAATGATT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAAGCCAGGGCAGCAATaGGGAAGGACACCACGATGC +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHKPGQQ*GRTPRC
Trigger: GCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGGCTCTTGCAACACTTaGTGTACCTATCACATACGA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQGSCNT*CTYHIR
Trigger: TCGTATGTGATAGGTACATCAAGTGTTGCAAGAGCC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTTTGAGCTAGACATTTaGAAAGCAACCCATCCTCCG +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHFELDI*KATHPP
Trigger: CGGAGGATGGGTTGCTTTTCAAATGTCTAGCTCAAA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000004531.14
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTTTGAGCTAGACATTTaGAAAGCAACCCATCCTCCG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQFELDI*KATHPP
Trigger: CGGAGGATGGGTTGCTTTTCAAATGTCTAGCTCAAA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCACCAGAGAGTAGGCCATaGGTGTGCCAATGGACATCA +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSPESRP*VCQWTS
Trigger: TGATGTCCATTGGCACACTCATGGCCTACTCTCTGG...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAAGGCTACTTTTTGCTaGTTCTGGGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSKATFC*FWGCLQ
Trigger: CTGGAGGCAGCCCCAGAATCAGCAAAAAGTAGCCTT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTGTTCACCAAGATGCTaGACGCTGGCAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNCSPRC*TLAKMV
Trigger: TACCATTTTTGCCAGCGTTCAGCATCTTGGTGAACA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTTTTCATCTCTCAGATaGCCCTCCAGGCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCFSSLR*PSRLCL
Trigger: TAGACACAGCCTGGAGGGTCATCTGAGAGATGAAAA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATGTATGCTAAGACGATaGCCAGCTCTGCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRCMLRR*PALLLQ
Trigger: TTGCAGGAGCAGAGCTGGTCATCGTCTTAGCATACA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGTATGCTAAGACGATaGCCAGCTCTGCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVCMLRR*PALLLQ
Trigger: TTGCAGGAGCAGAGCTGGTCATCGTCTTAGCATACA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTTCATCACTGATGAATaGAACTTCCACTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAFITDE*NFHSGG
Trigger: ACCTCCTGAGTGGAAGTTTCATTCATCAGTGATGAA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGATGCAGGGGGCATAGATaGAACCTCTTTACATTCAGT +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGCRGHR*NLFTFS
Trigger: ACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCA...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATCTGTTGGCTGAAGTTTaGGCAAACTGTCATACCTCA +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHLLAEV*ANCHTS
Trigger: TGAGGTATGACAGTTTGCTCAAACTTCAGCCAACAG...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGACACCCCTGTTGGCTaGAGTTTGAGCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVDTPVG*SLSKLS
Trigger: TGACAGTTTGCTCAAACTTCAGCCAACAGGGGTGTC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGACCTCTCTTAAGTCCCTaGCTGGGGATACGTCATTCA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRPLLSP*LGIRHS
Trigger: TGAATGACGTATCCCCAGTCAGGGACTTAAGAGAGG...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAGAGAAACAAAGAAGTaGACTCTGGGCCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVRETKK*TLGLTR
Trigger: CCTCGTCAGGCCCAGAGTTCACTTCTTTGTTTCTCT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTTCTTGGAAGACCCATaGGGAAAACGAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAFLEDP*GKRMFS
Trigger: GGAAAACATTCGTTTTCCTCATGGGTCTTCCAAGAA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGTAAACCACGCAGCTTaGGAGAAAATTCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMVNHAA*EKILGF
Trigger: GAAGCCCAGAATTTTCTCTCAAGCTGCGTGGTTTAC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCATCACGCCAAGGTGTaGTGTTCTGTAATCTCGGAA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCHHAKV*CSVISE
Trigger: TTCCGAGATTACAGAACATCACACCTTGGCGTGATG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCCATACTTTCCCCCTTaGTATTTAAGGACATGTGGG +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQPYFPP*YLRTCG
Trigger: CCCACATGTCCTTAAATATCAAGGGGGAAAGTATGG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACAGCCAGCCCTTCTATaGGTCACAGAGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLQPALL*VTEVPW
Trigger: CCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACCAACTGGGTCTTGGTaGGACACGTGGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLPTGSW*DTWHSK
Trigger: CTTGCTGTGCCACGTGTCTCACCAAGACCCAGTTGG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGTAGGTGTACAAATATaGAGACCCCGTCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMVGVQI*RPRLGN
Trigger: GTTCCCAAGACGGGGTCTGCATATTTGTACACCTAC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGTAGGTGTACAAATATaGAGACCCCGTCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCVGVQI*RPRLGN
Trigger: GTTCCCAAGACGGGGTCTGCATATTTGTACACCTAC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTTCTTCACCAGTTGTTaGAATGCAGTCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAFFTSC*NAVKSH
Trigger: GTGGGATTTGACTGCATTGCAACAACTGGTGAAGAA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGCAGAGAGAACCAGCTaGGACGACATATTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSAERTS*DDIFGR
Trigger: CCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGATGAGAACACAGGCTaGCACCAGAGAGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSDENTG*HQRVGH
Trigger: ATGGCCTACTCTCTGGTGGCAGCCTGTGTTCTCATC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACTGAAGCCCTGTCTCTaGAGCATGGTGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLLKPCL*SMVTWD
Trigger: GTCCCAGGTCACCATGCTGCAGAGACAGGGCTTCAG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAGATTTTTCTTCTGCTaGTGCATGAACGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHARFFFC*CMNVVW
Trigger: CCAGACAACGTTCATGCAGCAGCAGAAGAAAAATCT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGGCAGATTTTTCTTCTaGTGCTGCATGAACGTTGTC +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNGRFFF*CCMNVV
Trigger: GACAACGTTCATGCAGCAGCAGAAGAAAAATCTGCC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGGCAGATTTTTCTTCTaGTGCTGCATGAACGTTGTC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQGRFFF*CCMNVV
Trigger: GACAACGTTCATGCAGCAGCAGAAGAAAAATCTGCC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAGGGTGAACTATGTATaGAGCAAACCCATGACAACC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQRVNYV*SKPMTT
Trigger: GGTTGTCATGGGTTTGCTGCATACATAGTTCACCCT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAAATACCCGAGCCTGTaGTTATCCAACTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQKYPSL*LSNSFS
Trigger: AGAGAAGGAGTTGGATAAGCACAGGCTCGGGTATTT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTAGAGACAGGGTCTTaGTATGCTACTCAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSVETGS*YATQAG
Trigger: ACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTAC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGTAGCTACACATAGATaGTCACACTCTATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGVATHR*SHSIGC
Trigger: GCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTAC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGCAGCGGCATAATTTaGTGTCTTCTAGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNSSGII*CLLDCP
Trigger: TGGACAGTCTAGAAGACACCAAATTATGCCGCTGCT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTATGGGAATAGCTTTCTaGGGATTCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAMGIAF*GFRTSS
Trigger: TGAAGAAGTTCGGAATCCCCAGAAAGCTATTCCCAT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCACTGCGACGACATATTTaGCAGGACCCCATCCCACAT +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSLRRHI*QDPIPH
Trigger: ATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAG...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTCTCAGGAGAACATTTaGGCTGGTCGTAAGATAAGC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQSQENI*AGRKIS
Trigger: GCTTATCTTACGACCAGCCCAAATGTTCTCCTGAGA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACATGAACTCCGTAAGTaGTCAAGACACTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVHELRK*SRHSGP
Trigger: TGGGCCTGAGTGTCTTGACCACTTACGGAGTTCATG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCACACTCCCACTGTTTaGGGGCTATTCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLHTPTV*GLFITD
Trigger: ATCAGTGATGAATAGCCCCCAAACAGTGGGAGTGTG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCACACTCCCACTGTTTaGGGGCTATTCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMHTPTV*GLFITD
Trigger: ATCAGTGATGAATAGCCCCCAAACAGTGGGAGTGTG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAATTCCACTAGTTGTGTaGTCTGGGAGAGTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPIPLVV*SGRVCW
Trigger: CCAACAGACTCTCCCAGACCACACAACTAGTGGAAT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGCACCCTGGAAGTTGTaGAATGTCCGTAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPAPWKL*NVRNEF
Trigger: GAACTCATTACGGACATTCCACAACTTCCAGGGTGC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCTTACCATGTGCACCCTaGAAGTTGTGGAATGTCCGT +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLLPCAP*KLWNVR
Trigger: ACGGACATTCCACAACTTCCAGGGTGCACATGGTAA...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTGTCATCATGGGTATTaGAGGCCGATGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCCHHGY*RPMAFP
Trigger: AGGAAAAGCCATCGGCCTCCAATACCCATGATGACA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCTGTCATCATGGGTATTaGAGGCCGATGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLCHHGY*RPMAFP
Trigger: AGGAAAAGCCATCGGCCTCCAATACCCATGATGACA...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGGAGAGTCAGAATCTTaGCATGATTTCATCACGCCA +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGGESES*HDFITP
Trigger: TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAAGACCCAGCGATCATaGCAGTGGCATCAACCATGG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSKTQRS*QWHQPW
Trigger: CCATGGTTGATGCCACTGCCATGATCGCTGGGTCTT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGAAACCCAACCTGTTaGCAATATGACGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNRNPTC*QYDALS
Trigger: GGAAAGAGCGTCATATTGCCAACAGGTTGGGTTTCT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAGAAACCCAACCTGTTaGCAATATGACGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQRNPTC*QYDALS
Trigger: GGAAAGAGCGTCATATTGCCAACAGGTTGGGTTTCT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATTGCTAGTTTCGTGGTaGGACATCTGCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPLLVSW*DICSFC
Trigger: ACAGAAAGAGCAGATGTCTCACCACGAAACTAGCAA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCTTGCTAGTTTCGTGGTaGGACATCTGCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLLLVSW*DICSFC
Trigger: ACAGAAAGAGCAGATGTCTCACCACGAAACTAGCAA...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATGCAAGGAATCATTCTaGCGTCTGACGAAGGCGACA +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSCKESF*RLTKAT
Trigger: TGTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGGCTCTTGCAACACTTaGTGTACCTATCACATACGA +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMGSCNT*CTYHIR
Trigger: TCGTATGTGATAGGTACATCAAGTGTTGCAAGAGCC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTGTTCACCAAGATGCTaGACGCTGGCAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCCSPRC*TLAKMV
Trigger: TACCATTTTTGCCAGCGTTCAGCATCTTGGTGAACA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATGCAGGGGGCATAGATaGAACCTCTTTACATTCAGT +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPCRGHR*NLFTFS
Trigger: ACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCTGTTGGCTGAAGTTTaGGCAAACTGTCATACCTCA +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLLLAEV*ANCHTS
Trigger: TGAGGTATGACAGTTTGCTCAAACTTCAGCCAACAG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGTCATTCACAGCAAGTaGAGACCTCGTATTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQVIHSK*RPRILG
Trigger: TCCTAAAATACGAGGTCTTCACTTGCTGTGAATGAC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGATTCTTGGAAGACCCATaGGGAAAACGAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGFLEDP*GKRMFS
Trigger: GGAAAACATTCGTTTTCCTCATGGGTCTTCCAAGAA...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTTCTTGGAAGACCCATaGGGAAAACGAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNFLEDP*GKRMFS
Trigger: GGAAAACATTCGTTTTCCTCATGGGTCTTCCAAGAA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAACAGCAAGGATTTATaGGCATGCCTACAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCNSKDL*ACLQSL
Trigger: TAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAACAGCAAGGATTTATaGGCATGCCTACAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPNSKDL*ACLQSL
Trigger: TAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGACATCACGCCAAGGTGTaGTGTTCTGTAATCTCGGAA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRHHAKV*CSVISE
Trigger: TTCCGAGATTACAGAACATCACACCTTGGCGTGATG...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGTCAGAATCTTGGCATaGTTTCATCACGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRVRILA*FHHAKV
Trigger: CACCTTGGCGTGATGAAATCATGCCAAGATTCTGAC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTGGTAACAGTTGCTTaGAGCGTATTAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVVTVA*SVLGEI
Trigger: GATTTCTCCTAATACGCTTCAAGCAACTGTTACCAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGAAGTTCATCAAAGGTaGCACTCCAGGCTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVEVHQR*HSRLLQ
Trigger: TTGCAAGAGCCTGGAGTGGCACCTTTGATGAACTTC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACACCAGTTGTTGCAATaGAGTCAAATCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPHQLLQ*SQIPQR
Trigger: CCTTTGTGGGATTTGACTGCATTGCAACAACTGGTG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGGCAGATTTTTCTTCTaGTGCTGCATGAACGTTGTC +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPGRFFF*CCMNVV
Trigger: GACAACGTTCATGCAGCAGCAGAAGAAAAATCTGCC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAGGGTGAACTATGTATaGAGCAAACCCATGACAACC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCRVNYV*SKPMTT
Trigger: GGTTGTCATGGGTTTGCTGCATACATAGTTCACCCT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAAATACCCGAGCCTGTaGTTATCCAACTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPKYPSL*LSNSFS
Trigger: AGAGAAGGAGTTGGATAAGCACAGGCTCGGGTATTT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGTAGCTACACATAGATaGTCACACTCTATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCVATHR*SHSIGC
Trigger: GCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTAC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAACTGTAAGGGCTCACTaGTTTCCTGCTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSTVRAH*FPAGLQ
Trigger: CTGAAGACCAGCAGGAAAGCAGTGAGCCCTTACAGT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470360.5
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACATGCAGACCCCGTCTTaGGAACACGGGCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHMQTPS*EHGPQI
Trigger: AATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCAT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCAGAAGGTGGCTCTCTaGCACTTGCTGATATATTTT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQQKVAL*HLLIYF
Trigger: AAAATATATCAGCAAGTGCCAGAGAGCCACCTTCTG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCAGAAGGTGGCTCTCTaGCACTTGCTGATATATTTT +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNQKVAL*HLLIYF
Trigger: AAAATATATCAGCAAGTGCCAGAGAGCCACCTTCTG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAATGGGAATAGCTTTCTaGGGATTCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGMGIAF*GFRTSS
Trigger: TGAAGAAGTTCGGAATCCCCAGAAAGCTATTCCCAT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGATGGGAATAGCTTTCTaGGGATTCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQMGIAF*GFRTSS
Trigger: TGAAGAAGTTCGGAATCCCCAGAAAGCTATTCCCAT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGTCTCAGGAGAACATTTaGGCTGGTCGTAAGATAAGC +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMSQENI*AGRKIS
Trigger: GCTTATCTTACGACCAGCCCAAATGTTCTCCTGAGA...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAATTCCACTAGTTGTGTaGTCTGGGAGAGTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRIPLVV*SGRVCW
Trigger: CCAACAGACTCTCCCAGACCACACAACTAGTGGAAT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGATGTTTTCCTTGTCTTaGGATTACACGGGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMMFSLS*DYTGQL
Trigger: TAGCTGGCCCGTGTAATCCCAAGACAAGGAAAACAT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCATGTTTTCCTTGTCTTaGGATTACACGGGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLMFSLS*DYTGQL
Trigger: TAGCTGGCCCGTGTAATCCCAAGACAAGGAAAACAT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATTACCATGTGCACCCTaGAAGTTGTGGAATGTCCGT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRLPCAP*KLWNVR
Trigger: ACGGACATTCCACAACTTCCAGGGTGCACATGGTAA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGGTATTGGAGGCCGATaGCTTTTCCTTATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVGIGGR*LFLMLP
Trigger: AGGAAGCATAAGGAAAAGCCATCGGCCTCCAATACC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGGAGAGTCAGAATCTTaGCATGATTTCATCACGCCA +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLGESES*HDFITP
Trigger: TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGTCACAGAGGTCCCTTaGTCCTTATTCATCTTGATA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNVTEVP*SLFILI
Trigger: TATCAAGATGAATAAGGACCAAGGGACCTCTGTGAC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGTCACAGAGGTCCCTTaGTCCTTATTCATCTTGATA +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGVTEVP*SLFILI
Trigger: TATCAAGATGAATAAGGACCAAGGGACCTCTGTGAC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGTCACAGAGGTCCCTTaGTCCTTATTCATCTTGATA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQVTEVP*SLFILI
Trigger: TATCAAGATGAATAAGGACCAAGGGACCTCTGTGAC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAGAAACCCAACCTGTTaGCAATATGACGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLRNPTC*QYDALS
Trigger: GGAAAGAGCGTCATATTGCCAACAGGTTGGGTTTCT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAGCCATCCCGGGCCATaGCAAACAGAATTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHSHPGP*QTEFGV
Trigger: TACCCCGAATTCTGTTTGCCATGGCCCGGGATGGCT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACTGCTCTTTCTGTTTTaGGACTGTAAGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLLFLF*DCKGSL
Trigger: CAGTGAGCCCTTACAGTCCCAAAACAGAAAGAGCAG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470360.5
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGCTGCCTCCAGATGGTaGGAACGATGGCAACGAAGA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLAASRW*ERWQRR
Trigger: TCTTCGTTGCCATCGTTCTCACCATCTGGAGGCAGC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTAAGAATGGAACCATaGAGGCTACTTTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVRMEP*RLLFAD
Trigger: ATCAGCAAAAAGTAGCCTTCATGGTTCCATTCTTAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGTTCACCAAGATGCTaGACGCTGGCAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVCSPRC*TLAKMV
Trigger: TACCATTTTTGCCAGCGTTCAGCATCTTGGTGAACA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCCTCTTTACATTCAGTaGTTTCCCTCTATTTCAGTA +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAPLYIQ*FPSISV
Trigger: TACTGAAATAGAGGGAAATCACTGAATGTAAAGAGG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACTGTTGGCTGAAGTTTaGGCAAACTGTCATACCTCA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLLAEV*ANCHTS
Trigger: TGAGGTATGACAGTTTGCTCAAACTTCAGCCAACAG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGTCATTCACAGCAAGTaGAGACCTCGTATTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPVIHSK*RPRILG
Trigger: TCCTAAAATACGAGGTCTTCACTTGCTGTGAATGAC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTTCTTGGAAGACCCATaGGGAAAACGAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCFLEDP*GKRMFS
Trigger: GGAAAACATTCGTTTTCCTCATGGGTCTTCCAAGAA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAAACAGCAAGGATTTATaGGCATGCCTACAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRNSKDL*ACLQSL
Trigger: TAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGTTTTCAGCGTACTGTaGCAACAGCAAGGATTTATG +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLVFSVL*QQQGFM
Trigger: CATAAATCCTTGCTGTTGTCACAGTACGCTGAAAAC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGTTTTCAGCGTACTGTaGCAACAGCAAGGATTTATG +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMVFSVL*QQQGFM
Trigger: CATAAATCCTTGCTGTTGTCACAGTACGCTGAAAAC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTCTCGGAACACACCCTaGTTTAAGAGGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHSRNTP*FKRREG
Trigger: GCCTTCCCTCCTCTTAAATCAGGGTGTGTTCCGAGA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCACATCACGCCAAGGTGTaGTGTTCTGTAATCTCGGAA +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSHHAKV*CSVISE
Trigger: TTCCGAGATTACAGAACATCACACCTTGGCGTGATG...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGTGGTAACAGTTGCTTaGAGCGTATTAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMVVTVA*SVLGEI
Trigger: GATTTCTCCTAATACGCTTCAAGCAACTGTTACCAC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGTGGTAACAGTTGCTTaGAGCGTATTAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLVVTVA*SVLGEI
Trigger: GATTTCTCCTAATACGCTTCAAGCAACTGTTACCAC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGACCATACTTTCCCCCTTaGTATTTAAGGACATGTGGG +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRPYFPP*YLRTCG
Trigger: CCCACATGTCCTTAAATATCAAGGGGGAAAGTATGG...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACGTGGCAGCAACTGGTaGCTGCCTCTTACTCACTCT +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLRGSNW*LPLTHS
Trigger: AGAGTGAGTAAGAGGCAGTCACCAGTTGCTGCCACG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACCATCAAAGCAGAAATaGCCCCTGCAGTCAACGTGG +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLPSKQK*PLQSTW
Trigger: CCACGTTGACTGCAGGGGTCATTTCTGCTTTGATGG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTAGGTGTACAAATATaGAGACCCCGTCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSVGVQI*RPRLGN
Trigger: GTTCCCAAGACGGGGTCTGCATATTTGTACACCTAC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGACACCAGTTGTTGCAATaGAGTCAAATCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRHQLLQ*SQIPQR
Trigger: CCTTTGTGGGATTTGACTGCATTGCAACAACTGGTG...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACACCAGTTGTTGCAATaGAGTCAAATCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVHQLLQ*SQIPQR
Trigger: CCTTTGTGGGATTTGACTGCATTGCAACAACTGGTG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTTCTTCACCAGTTGTTaGAATGCAGTCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCFFTSC*NAVKSH
Trigger: GTGGGATTTGACTGCATTGCAACAACTGGTGAAGAA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAACGAGAGAAGCTGACTaGTGTGTTGGCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLTREAD*CVGRRE
Trigger: CTCCCTTCTGCCAACACAGCAGTCAGCTTCTCTCGT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAATCAGGAAGCCAATTaGCATCCAAATGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGNQEAN*HPNAES
Trigger: AGATTCAGCATTTGGATGGCAATTGGCTTCCTGATT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTTTTTCTTCTGCTGCTaGATGAACGTTGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNFFFCC*MNVVWI
Trigger: TATCCAGACAACGTTCATGCAGCAGCAGAAGAAAAA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAGATTTTTCTTCTGCTaGTGCATGAACGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPRFFFC*CMNVVW
Trigger: CCAGACAACGTTCATGCAGCAGCAGAAGAAAAATCT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAGATTTTTCTTCTGCTaGTGCATGAACGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCRFFFC*CMNVVW
Trigger: CCAGACAACGTTCATGCAGCAGCAGAAGAAAAATCT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTGGGTGATGGTCATTTaGTTGAATGGCAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHWVMVI*LNGRFF
Trigger: GAAAAATCTGCCATTCAAGCAAATGACCATCACCCA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGGGTGATGGTCATTTaGTTGAATGGCAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQWVMVI*LNGRFF
Trigger: GAAAAATCTGCCATTCAAGCAAATGACCATCACCCA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAAAAGTTCAAAAGGATaGCAACTAGTGGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAKSSKG*QLVAWN
Trigger: ATTCCATGCCACTAGTTGGCATCCTTTTGAACTTTT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAAATACCCGAGCCTGTaGTTATCCAACTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVKYPSL*LSNSFS
Trigger: AGAGAAGGAGTTGGATAAGCACAGGCTCGGGTATTT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGTAATCTCAGCTCACTaGAGCCTCACTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLVISAH*SLTLLG
Trigger: GCCCAGGAGAGTGAGGCTGCAGTGAGCTGAGATTAC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTTTTGTGGTAACAGTTaGTTGAAGCGTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAFCGNS*LKRIRR
Trigger: TCTCCTAATACGCTTCAAGCAACTGTTACCACAAAA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGACTTTGCTGGCATTATTaGTACGCGAATATCCATACT +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGLCWHY*YANIHT
Trigger: AGTATGGATATTCGCGTAGCAATAATGCCAGCAAAG...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCAGCAAGGCTGTCAGTaGATGTGCATAAATTGTAGA +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMQQGCQ*MCINCR
Trigger: TCTACAATTTATGCACATGCACTGACAGCCTTGCTG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCAGCAAGGCTGTCAGTaGATGTGCATAAATTGTAGA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCQQGCQ*MCINCR
Trigger: TCTACAATTTATGCACATGCACTGACAGCCTTGCTG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGCAGCAACTGGTGACTaGCTCTTACTCACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHAATGD*LLLTLA
Trigger: TGCCAGAGTGAGTAAGAGGCAGTCACCAGTTGCTGC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGCTGTCGCAAACCGGTaGGGCAGGTGTTCCAATAAA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHAVANR*GRCSNK
Trigger: TTTATTGGAACACCTGCCCCACCGGTTTGCGACAGC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACAGAAGGTGGCTCTCTaGCACTTGCTGATATATTTT +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPQKVAL*HLLIYF
Trigger: AAAATATATCAGCAAGTGCCAGAGAGCCACCTTCTG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCAGAAGGTGGCTCTCTaGCACTTGCTGATATATTTT +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLQKVAL*HLLIYF
Trigger: AAAATATATCAGCAAGTGCCAGAGAGCCACCTTCTG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAATGGGAATAGCTTTCTaGGGATTCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPMGIAF*GFRTSS
Trigger: TGAAGAAGTTCGGAATCCCCAGAAAGCTATTCCCAT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATCTCAGGAGAACATTTaGGCTGGTCGTAAGATAAGC +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVSQENI*AGRKIS
Trigger: GCTTATCTTACGACCAGCCCAAATGTTCTCCTGAGA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATCTTCGAGGTTACCCTaGGAGACGATCCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLSSRLP*ETIPDH
Trigger: ATGGTCTGGGATCGTCTCCCAGGGTAACCTCGAAGA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGGTCATTTGCTTGAATaGCAGATTTTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGGHLLE*QIFLLL
Trigger: CAGCAGAAGAAAAATCTGCCATTCAAGCAAATGACC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGGTCATTTGCTTGAATaGCAGATTTTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHGHLLE*QIFLLL
Trigger: CAGCAGAAGAAAAATCTGCCATTCAAGCAAATGACC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGGTCATTTGCTTGAATaGCAGATTTTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNGHLLE*QIFLLL
Trigger: CAGCAGAAGAAAAATCTGCCATTCAAGCAAATGACC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCCAAAGCCCTTAAATTaGGCCATTTGCCATTTAACA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNPKPLN*AICHLT
Trigger: TGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGTGCTACACAATTTATaGGGTAGGGGGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHVLHNL*GRGRKI
Trigger: TATTTTTCTCCCCCTACCCCATAAATTGTGTAGCAC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATTCACCATGCTGTCCTaGGAAATGTCACCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLFTMLS*EMSPSL
Trigger: GAGGCTGGGTGACATTTCCCAGGACAGCATGGTGAA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAATGTTTTCCTTGTCTTaGGATTACACGGGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRMFSLS*DYTGQL
Trigger: TAGCTGGCCCGTGTAATCCCAAGACAAGGAAAACAT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTTTCTCCACATCAGTTaGGTTTTGTACCCACCTAAT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQFLHIS*VLYPPN
Trigger: ATTAGGTGGGTACAAAACCCAACTGATGTGGAGAAA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGATTTCTCCACATCAGTTaGGTTTTGTACCCACCTAAT +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGFLHIS*VLYPPN
Trigger: ATTAGGTGGGTACAAAACCCAACTGATGTGGAGAAA...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGGTATTGGAGGCCGATaGCTTTTCCTTATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSGIGGR*LFLMLP
Trigger: AGGAAGCATAAGGAAAAGCCATCGGCCTCCAATACC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGAAAATGACCTTTGCTaGCATTATTGCTACGCGAAT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQENDLC*HYCYAN
Trigger: ATTCGCGTAGCAATAATGCCAGCAAAGGTCATTTTC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGTCACAGAGGTCCCTTaGTCCTTATTCATCTTGATA +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPVTEVP*SLFILI
Trigger: TATCAAGATGAATAAGGACCAAGGGACCTCTGTGAC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 72 bp TCTGGGCTTCAGATTTTACCATGTGCACCCTGGAAGTaGTGGAATGTCCGTAATGAGTTCTGTGTCATGGAT +
Preference number: 4 (lower is better)
Translates to: SGLQILPCAPWK*WNVRNEFCVMD
Trigger: ATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATGGTAAAATCTGAAGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 72 bp GATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTaGGTCCTTATTCATCTTGATATACTCATGGGATGT +
Preference number: 4 (lower is better)
Translates to: DSASPSMSHRGP*VLIHLDILMGC
Trigger: ACATCCCATGAGTATATCAAGATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATCCAAGAAGACTTGTTaGCAAGGCGCAGAGAGAACC +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLSKKTC*QGAERT
Trigger: GGTTCTCTCTGCGCCTTGTCAACAAGTCTTCTTGGA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000004531.14
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACCAGAGAGTAGGCCATaGGTGTGCCAATGGACATCA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLPESRP*VCQWTS
Trigger: TGATGTCCATTGGCACACTCATGGCCTACTCTCTGG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGTAAGAATGGAACCATaGAGGCTACTTTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPVRMEP*RLLFAD
Trigger: ATCAGCAAAAAGTAGCCTTCATGGTTCCATTCTTAC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGTAAGAATGGAACCATaGAGGCTACTTTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCVRMEP*RLLFAD
Trigger: ATCAGCAAAAAGTAGCCTTCATGGTTCCATTCTTAC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR TCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGGTAAGAATGGAACCATaGAGGCTACTTTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMVRMEP*RLLFAD
Trigger: ATCAGCAAAAAGTAGCCTTCATGGTTCCATTCTTAC...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATTCATCACTGATGAATaGAACTTCCACTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRFITDE*NFHSGG
Trigger: ACCTCCTGAGTGGAAGTTTCATTCATCAGTGATGAA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCCTCTTTACATTCAGTaGTTTCCCTCTATTTCAGTA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQPLYIQ*FPSISV
Trigger: TACTGAAATAGAGGGAAATCACTGAATGTAAAGAGG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAGACACCCCTGTTGGCTaGAGTTTGAGCAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLDTPVG*SLSKLS
Trigger: TGACAGTTTGCTCAAACTTCAGCCAACAGGGGTGTC...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGCTTTCTGGCCCTGGTaGCTATCTTCACTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVAFWPW*LSSLFN
Trigger: ATTAAAAAGTGAAGATAGTCACCAGGGCCAGAAAGC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGTTTTCAGCGTACTGTaGCAACAGCAAGGATTTATG +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRVFSVL*QQQGFM
Trigger: CATAAATCCTTGCTGTTGTCACAGTACGCTGAAAAC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGTGGTAACAGTTGCTTaGAGCGTATTAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVVVTVA*SVLGEI
Trigger: GATTTCTCCTAATACGCTTCAAGCAACTGTTACCAC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATTCTTCACCAGTTGTTaGAATGCAGTCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVFFTSC*NAVKSH
Trigger: GTGGGATTTGACTGCATTGCAACAACTGGTGAAGAA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCTGGGTGATGGTCATTTaGTTGAATGGCAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLWVMVI*LNGRFF
Trigger: GAAAAATCTGCCATTCAAGCAAATGACCATCACCCA...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAGTATGTGCAGTATATaGCACCGATTAATGACGACA +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLSMCSI*HRLMTT
Trigger: TGTCGTCATTAATCGGTGGCATATACTGCACATACT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCTCTATTTCAGTATGTaGAGTATATGCCACCGATTA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLYFSM*SICHRL
Trigger: TAATCGGTGGCATATACTGCACATACTGAAATAGAG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCTCTATTTCAGTATGTaGAGTATATGCCACCGATTA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQLYFSM*SICHRL
Trigger: TAATCGGTGGCATATACTGCACATACTGAAATAGAG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTTTAGGACCACTGTTTaGAAAGGAGACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQFRTTV*KGDKSS
Trigger: TGAACTTTTGTCTCCTTTGCAAACAGTGGTCCTAAA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTTTAGGACCACTGTTTaGAAAGGAGACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNFRTTV*KGDKSS
Trigger: TGAACTTTTGTCTCCTTTGCAAACAGTGGTCCTAAA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATCAGATTTTACCATGTaGACCCTGGAAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRSDFTM*TLEVVE
Trigger: TTCCACAACTTCCAGGGTGCACATGGTAAAATCTGA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTTTTGTGGTAACAGTTaGTTGAAGCGTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHFCGNS*LKRIRR
Trigger: TCTCCTAATACGCTTCAAGCAACTGTTACCACAAAA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTTTGCTGGCATTATTaGTACGCGAATATCCATACT +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPLCWHY*YANIHT
Trigger: AGTATGGATATTCGCGTAGCAATAATGCCAGCAAAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCTTTGCTGGCATTATTaGTACGCGAATATCCATACT +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMLCWHY*YANIHT
Trigger: AGTATGGATATTCGCGTAGCAATAATGCCAGCAAAG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAATGAAAATGACCTTTaGTGGCATTATTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCNENDL*WHYCYA
Trigger: CGCGTAGCAATAATGCCAGCAAAGGTCATTTTCATT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACAGCAAGGCTGTCAGTaGATGTGCATAAATTGTAGA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVQQGCQ*MCINCR
Trigger: TCTACAATTTATGCACATGCACTGACAGCCTTGCTG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACCTGTAAGGGCTCACTaGTTTCCTGCTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLPVRAH*FPAGLQ
Trigger: CTGAAGACCAGCAGGAAAGCAGTGAGCCCTTACAGG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATCTCAGGAGAACATTTaGGCTGGTCGTAAGATAAGC +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSSQENI*AGRKIS
Trigger: GCTTATCTTACGACCAGCCCAAATGTTCTCCTGAGA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATCTTCGAGGTTACCCTaGGAGACGATCCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLSSRLP*ETIPDH
Trigger: ATGGTCTGGGATCGTCTCCCAGGGTAACCTCGAAGA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACCATGAACTCCGTAAGTaGTCAAGACACTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHHELRK*SRHSGP
Trigger: TGGGCCTGAGTGTCTTGACCACTTACGGAGTTCATG...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTGCATGAACGTTGTCTaGATAAGCATCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHCMNVV*ISIFFI
Trigger: AATGAAGAAGATGCTTATCCAGACAACGTTCATGCA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGCATGAACGTTGTCTaGATAAGCATCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQCMNVV*ISIFFI
Trigger: AATGAAGAAGATGCTTATCCAGACAACGTTCATGCA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGGTCATTTGCTTGAATaGCAGATTTTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCGHLLE*QIFLLL
Trigger: CAGCAGAAGAAAAATCTGCCATTCAAGCAAATGACC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATATCACAATAAACTCCTaGCTATACAAAACCATCGCA +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHITINS*LYKTIA
Trigger: TGCGATGGTTTTGTATAGCCAGGAGTTTATTGTGAT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGACTTGAGAGAAAATTCTaGGCTTCAGATTTTACCATG +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGLERKF*ASDFTM
Trigger: CATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAG...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGAAAATGACCTTTGCTaGCATTATTGCTACGCGAAT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCENDLC*HYCYAN
Trigger: ATTCGCGTAGCAATAATGCCAGCAAAGGTCATTTTC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTTTTCATCTCTCAGATaGCCCTCCAGGCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHFSSLR*PSRLCL
Trigger: TAGACACAGCCTGGAGGGTCATCTGAGAGATGAAAA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTCATTCACAGCAAGTaGAGACCTCGTATTTTAGGA +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSVIHSK*RPRILG
Trigger: TCCTAAAATACGAGGTCTTCACTTGCTGTGAATGAC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACCTCTCTTAAGTCCCTaGCTGGGGATACGTCATTCA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLPLLSP*LGIRHS
Trigger: TGAATGACGTATCCCCAGTCAGGGACTTAAGAGAGG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCACGAGAAATAGTTCATaGGAAGCAAATACACTGCAA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCTRNSS*EANTLQ
Trigger: TTGCAGTGTATTTGCTTCTCATGAACTATTTCTCGT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTTTTCAGCGTACTGTaGCAACAGCAAGGATTTATG +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSVFSVL*QQQGFM
Trigger: CATAAATCCTTGCTGTTGTCACAGTACGCTGAAAAC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAAAATCGGGATATTCTaGAAGACCAGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGKIGIF*KTSVIH
Trigger: ATGAATTACACTGGTCTTGCAGAATATCCCGATTTT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATTCTTCACCAGTTGTTaGAATGCAGTCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSFFTSC*NAVKSH
Trigger: GTGGGATTTGACTGCATTGCAACAACTGGTGAAGAA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAAATCAGGAAGCCAATTaGCATCCAAATGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRNQEAN*HPNAES
Trigger: AGATTCAGCATTTGGATGGCAATTGGCTTCCTGATT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAATCAGGAAGCCAATTaGCATCCAAATGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVNQEAN*HPNAES
Trigger: AGATTCAGCATTTGGATGGCAATTGGCTTCCTGATT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATTTTTCTTCTGCTGCTaGATGAACGTTGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVFFFCC*MNVVWI
Trigger: TATCCAGACAACGTTCATGCAGCAGCAGAAGAAAAA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGGGTGATGGTCATTTaGTTGAATGGCAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVWVMVI*LNGRFF
Trigger: GAAAAATCTGCCATTCAAGCAAATGACCATCACCCA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCTCTATTTCAGTATGTaGAGTATATGCCACCGATTA +
Preference number: 4 (lower is better)
Translates to: SPTAGGIDETSLHSVISLLYFSM*SICHRL
Trigger: TAATCGGTGGCATATACTGCACATACTGAAATAGAG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAAAAGTTCAAAAGGATaGCAACTAGTGGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCKSSKG*QLVAWN
Trigger: ATTCCATGCCACTAGTTGGCATCCTTTTGAACTTTT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTTAAATTGGGCCATTTaGCATTTAACAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLNWAI*HLTMEQ
Trigger: CTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTTAAATTGGGCCATTTaGCATTTAACAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHLNWAI*HLTMEQ
Trigger: CTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTTTTGTGGTAACAGTTaGTTGAAGCGTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCFCGNS*LKRIRR
Trigger: TCTCCTAATACGCTTCAAGCAACTGTTACCACAAAA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATTTTGTGGTAACAGTTaGTTGAAGCGTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPFCGNS*LKRIRR
Trigger: TCTCCTAATACGCTTCAAGCAACTGTTACCACAAAA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACACACTCCCACTGTTTaGGGGCTATTCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLHTPTV*GLFITD
Trigger: ATCAGTGATGAATAGCCCCCAAACAGTGGGAGTGTG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAAGCAGACACCCCTGTTaGCTGAAGTTTGAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLSRHPC*LKFEQT
Trigger: AGTTTGCTCAAACTTCAGCCAACAGGGGTGTCTGCT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTTAGAAAAGGATGCTTaGGGTCTACTTATTCAAGCA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCLEKDA*GLLIQA
Trigger: TGCTTGAATAAGTAGACCCCAAGCATCCTTTTCTAA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACCAAAGCCCTTAAATTaGGCCATTTGCCATTTAACA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVPKPLN*AICHLT
Trigger: TGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGTGCTACACAATTTATaGGGTAGGGGGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRVLHNL*GRGRKI
Trigger: TATTTTTCTCCCCCTACCCCATAAATTGTGTAGCAC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCATCACAATAAACTCCTaGCTATACAAAACCATCGCA +
Preference number: 4 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCITINS*LYKTIA
Trigger: TGCGATGGTTTTGTATAGCCAGGAGTTTATTGTGAT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTTGAGAGAAAATTCTaGGCTTCAGATTTTACCATG +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPLERKF*ASDFTM
Trigger: CATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGGTATTGGAGGCCGATaGCTTTTCCTTATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHGIGGR*LFLMLP
Trigger: AGGAAGCATAAGGAAAAGCCATCGGCCTCCAATACC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATGTCATCATGGGTATTaGAGGCCGATGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLCHHGY*RPMAFP
Trigger: AGGAAAAGCCATCGGCCTCCAATACCCATGATGACA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGAAAATGACCTTTGCTaGCATTATTGCTACGCGAAT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRENDLC*HYCYAN
Trigger: ATTCGCGTAGCAATAATGCCAGCAAAGGTCATTTTC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATCACTGCTTTCCTGCTaGTCTTCAGAGAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLSLLSC*SSESLL
Trigger: CAGGAGACTCTCTGAAGACCAGCAGGAAAGCAGTGA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470360.5
ENST00000494857.6
3UTR CAA 72 bp AGGCAAATTAGATCCAAAGCCCTTAAATTGGGCCATTaGCCATTTAACAATGGAACAGGCCGTTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: RQIRSKALKLGH*PFNNGTGRSYQ
Trigger: CTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGATCTAATTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 72 bp CTTATCCAACTCCTTCTCTCCAGTAAACCACGCAGCTaGAGAGAAAATTCTGGGCTTCAGATTTTACCATGT +
Preference number: 4 (lower is better)
Translates to: LIQLLLSSKPRS*RENSGLQILPC
Trigger: ACATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAGCTGCGTGGTTTACTGGAGAGAAGGAGTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAATCATTCTGACGTCTaGCGAAGGCGACAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLNHSDV*RRRQEK
Trigger: TTTCTCCTGTCGCCTTCGTCAGACGTCAGAATGATT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAGGCTCTTGCAACACTTaGTGTACCTATCACATACGA +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLGSCNT*CTYHIR
Trigger: TCGTATGTGATAGGTACATCAAGTGTTGCAAGAGCC...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGGCTCTTGCAACACTTaGTGTACCTATCACATACGA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHGSCNT*CTYHIR
Trigger: TCGTATGTGATAGGTACATCAAGTGTTGCAAGAGCC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATGTTCACCAAGATGCTaGACGCTGGCAAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLCSPRC*TLAKMV
Trigger: TACCATTTTTGCCAGCGTTCAGCATCTTGGTGAACA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGACCTCTTTACATTCAGTaGTTTCCCTCTATTTCAGTA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRPLYIQ*FPSISV
Trigger: TACTGAAATAGAGGGAAATCACTGAATGTAAAGAGG...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAACGAGAAATAGTTCATaGGAAGCAAATACACTGCAA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVTRNSS*EANTLQ
Trigger: TTGCAGTGTATTTGCTTCTCATGAACTATTTCTCGT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGTCAGAATCTTGGCATaGTTTCATCACGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLVRILA*FHHAKV
Trigger: CACCTTGGCGTGATGAAATCATGCCAAGATTCTGAC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACCATACTTTCCCCCTTaGTATTTAAGGACATGTGGG +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLPYFPP*YLRTCG
Trigger: CCCACATGTCCTTAAATATCAAGGGGGAAAGTATGG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGAAGTTCATCAAAGGTaGCACTCCAGGCTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLEVHQR*HSRLLQ
Trigger: TTGCAAGAGCCTGGAGTGGCACCTTTGATGAACTTC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAAAATCGGGATATTCTaGAAGACCAGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: SSITGKGESESWHDFITPKIGIF*KTSVIH
Trigger: ATGAATTACACTGGTCTTGCAGAATATCCCGATTTT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAAAATCGGGATATTCTaGAAGACCAGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMKIGIF*KTSVIH
Trigger: ATGAATTACACTGGTCTTGCAGAATATCCCGATTTT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATGGGTGATGGTCATTTaGTTGAATGGCAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSWVMVI*LNGRFF
Trigger: GAAAAATCTGCCATTCAAGCAAATGACCATCACCCA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAAGGGTGAACTATGTATaGAGCAAACCCATGACAACC +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLRVNYV*SKPMTT
Trigger: GGTTGTCATGGGTTTGCTGCATACATAGTTCACCCT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATTTAGGACCACTGTTTaGAAAGGAGACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRFRTTV*KGDKSS
Trigger: TGAACTTTTGTCTCCTTTGCAAACAGTGGTCCTAAA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATTTAGGACCACTGTTTaGAAAGGAGACAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVFRTTV*KGDKSS
Trigger: TGAACTTTTGTCTCCTTTGCAAACAGTGGTCCTAAA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAGTAGCTACACATAGATaGTCACACTCTATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLVATHR*SHSIGC
Trigger: GCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTAC...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAGCAGCGGCATAATTTaGTGTCTTCTAGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHSSGII*CLLDCP
Trigger: TGGACAGTCTAGAAGACACCAAATTATGCCGCTGCT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCATGAACGTTGTCTaGATAAGCATCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVCMNVV*ISIFFI
Trigger: AATGAAGAAGATGCTTATCCAGACAACGTTCATGCA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CCA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATGCATGAACGTTGTCTaGATAAGCATCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRCMNVV*ISIFFI
Trigger: AATGAAGAAGATGCTTATCCAGACAACGTTCATGCA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATTAGAAAAGGATGCTTaGGGTCTACTTATTCAAGCA +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLEKDA*GLLIQA
Trigger: TGCTTGAATAAGTAGACCCCAAGCATCCTTTTCTAA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACACTAGTTGTGTGGTCTaGGAGAGTCTGTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHTSCVV*ESLLAY
Trigger: ATAAGCCAACAGACTCTCCCAGACCACACAACTAGT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAACTAGTTGTGTGGTCTaGGAGAGTCTGTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLTSCVV*ESLLAY
Trigger: ATAAGCCAACAGACTCTCCCAGACCACACAACTAGT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGCTACACAATTTATaGGGTAGGGGGAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSVLHNL*GRGRKI
Trigger: TATTTTTCTCCCCCTACCCCATAAATTGTGTAGCAC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACTTGAGAGAAAATTCTaGGCTTCAGATTTTACCATG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLERKF*ASDFTM
Trigger: CATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATTTCTCCACATCAGTTaGGTTTTGTACCCACCTAAT +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSFLHIS*VLYPPN
Trigger: ATTAGGTGGGTACAAAACCCAACTGATGTGGAGAAA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATTCATCACTGATGAATaGAACTTCCACTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLFITDE*NFHSGG
Trigger: ACCTCCTGAGTGGAAGTTTCATTCATCAGTGATGAA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGCTTTCTGGCCCTGGTaGCTATCTTCACTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHAFWPW*LSSLFN
Trigger: ATTAAAAAGTGAAGATAGTCACCAGGGCCAGAAAGC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAACGAGAAATAGTTCATaGGAAGCAAATACACTGCAA +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSTRNSS*EANTLQ
Trigger: TTGCAGTGTATTTGCTTCTCATGAACTATTTCTCGT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAACAGCAAGGATTTATaGGCATGCCTACAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLNSKDL*ACLQSL
Trigger: TAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAAAATCGGGATATTCTaGAAGACCAGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVKIGIF*KTSVIH
Trigger: ATGAATTACACTGGTCTTGCAGAATATCCCGATTTT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACACCAGTTGTTGCAATaGAGTCAAATCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLHQLLQ*SQIPQR
Trigger: CCTTTGTGGGATTTGACTGCATTGCAACAACTGGTG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAGATTTTTCTTCTGCTaGTGCATGAACGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHRFFFC*CMNVVW
Trigger: CCAGACAACGTTCATGCAGCAGCAGAAGAAAAATCT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGGCAGATTTTTCTTCTaGTGCTGCATGAACGTTGTC +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLGRFFF*CCMNVV
Trigger: GACAACGTTCATGCAGCAGCAGAAGAAAAATCTGCC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATTAAATTGGGCCATTTaGCATTTAACAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLNWAI*HLTMEQ
Trigger: CTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTCAGATTTTACCATGTaGACCCTGGAAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHSDFTM*TLEVVE
Trigger: TTCCACAACTTCCAGGGTGCACATGGTAAAATCTGA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAAATACCCGAGCCTGTaGTTATCCAACTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLKYPSL*LSNSFS
Trigger: AGAGAAGGAGTTGGATAAGCACAGGCTCGGGTATTT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGTAGCTACACATAGATaGTCACACTCTATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLVATHR*SHSIGC
Trigger: GCAGCCTATAGAGTGTGAGCATCTATGTGTAGCTAC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATCTCAGGAGAACATTTaGGCTGGTCGTAAGATAAGC +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLSQENI*AGRKIS
Trigger: GCTTATCTTACGACCAGCCCAAATGTTCTCCTGAGA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATGCATGAACGTTGTCTaGATAAGCATCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSCMNVV*ISIFFI
Trigger: AATGAAGAAGATGCTTATCCAGACAACGTTCATGCA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAATCACAATAAACTCCTaGCTATACAAAACCATCGCA +
Preference number: 4 (lower is better)
Translates to: ATSISPTAGGIDETSLHSITINS*LYKTIA
Trigger: TGCGATGGTTTTGTATAGCCAGGAGTTTATTGTGAT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGTCATTCACAGCAAGTaGAGACCTCGTATTTTAGGA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLVIHSK*RPRILG
Trigger: TCCTAAAATACGAGGTCTTCACTTGCTGTGAATGAC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGCTTTCTGGCCCTGGTaGCTATCTTCACTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLAFWPW*LSSLFN
Trigger: ATTAAAAAGTGAAGATAGTCACCAGGGCCAGAAAGC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATTCTTCACCAGTTGTTaGAATGCAGTCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLFFTSC*NAVKSH
Trigger: GTGGGATTTGACTGCATTGCAACAACTGGTGAAGAA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAATCAGGAAGCCAATTaGCATCCAAATGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHNQEAN*HPNAES
Trigger: AGATTCAGCATTTGGATGGCAATTGGCTTCCTGATT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATTTTTCTTCTGCTGCTaGATGAACGTTGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLFFFCC*MNVVWI
Trigger: TATCCAGACAACGTTCATGCAGCAGCAGAAGAAAAA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACCTTTGCTGGCATTATTaGTACGCGAATATCCATACT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHLCWHY*YANIHT
Trigger: AGTATGGATATTCGCGTAGCAATAATGCCAGCAAAG...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAAATGAAAATGACCTTTaGTGGCATTATTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLNENDL*WHYCYA
Trigger: CGCGTAGCAATAATGCCAGCAAAGGTCATTTTCATT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAATGAAAATGACCTTTaGTGGCATTATTGCTACGCG +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHNENDL*WHYCYA
Trigger: CGCGTAGCAATAATGCCAGCAAAGGTCATTTTCATT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTTTCTCCACATCAGTTaGGTTTTGTACCCACCTAAT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHFLHIS*VLYPPN
Trigger: ATTAGGTGGGTACAAAACCCAACTGATGTGGAGAAA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 72 bp CATCAAACATCAATTTTTCTCCACATCAGTTGGGTTTaGTACCCACCTAATGACATAGTCAAAGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: HQTSIFLHISWV*YPPNDIVKAHH
Trigger: ATGGTGGGCTTTGACTATGTCATTAGGTGGGTACAAAACCCAACTGATGTGGAGAAAAATTGATGTTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 72 bp TTTGGAATTAAGGAGCCCAAACTACCTTACTTGCATTaGAAGTCTTTCACTTCATATCCTACCCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: FGIKEPKLPYLH*KSFTSYPTPSV
Trigger: GACTGATGGGGTAGGATATGAAGTGAAAGACTTCAAATGCAAGTAAGGTAGTTTGGGCTCCTTAATTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR TCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAACGAGAAATAGTTCATaGGAAGCAAATACACTGCAA +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLTRNSS*EANTLQ
Trigger: TTGCAGTGTATTTGCTTCTCATGAACTATTTCTCGT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAATCAGGAAGCCAATTaGCATCCAAATGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLNQEAN*HPNAES
Trigger: AGATTCAGCATTTGGATGGCAATTGGCTTCCTGATT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAGTATGTGCAGTATATaGCACCGATTAATGACGACA +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLSMCSI*HRLMTT
Trigger: TGTCGTCATTAATCGGTGGCATATACTGCACATACT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAAAAGTTCAAAAGGATaGCAACTAGTGGCATGGAAT +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHKSSKG*QLVAWN
Trigger: ATTCCATGCCACTAGTTGGCATCCTTTTGAACTTTT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGGTCATTTGCTTGAATaGCAGATTTTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLGHLLE*QIFLLL
Trigger: CAGCAGAAGAAAAATCTGCCATTCAAGCAAATGACC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTTAGAAAAGGATGCTTaGGGTCTACTTATTCAAGCA +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHLEKDA*GLLIQA
Trigger: TGCTTGAATAAGTAGACCCCAAGCATCCTTTTCTAA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATTAGAAAAGGATGCTTaGGGTCTACTTATTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLLEKDA*GLLIQA
Trigger: TGCTTGAATAAGTAGACCCCAAGCATCCTTTTCTAA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACCTTGAGAGAAAATTCTaGGCTTCAGATTTTACCATG +
Preference number: 4 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHLERKF*ASDFTM
Trigger: CATGGTAAAATCTGAAGCCCAGAATTTTCTCTCAAG...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGAAAATGACCTTTGCTaGCATTATTGCTACGCGAAT +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLENDLC*HYCYAN
Trigger: ATTCGCGTAGCAATAATGCCAGCAAAGGTCATTTTC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 72 bp ACAATTGTTCACATTTCCTGTGTGAAGGGTCTATTCTaGATTGGGTATAGAATCAAACGGGTTTTCAGCGTA +
Preference number: 4 (lower is better)
Translates to: TIVHISCVKGLF*IGYRIKRVFSV
Trigger: TACGCTGAAAACCCGTTTGATTCTATACCCAATCAAGAATAGACCCTTCACACAGGAAATGTGAACAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATTAAATTGGGCCATTTaGCATTTAACAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLLNWAI*HLTMEQ
Trigger: CTGTTCCATTGTTAAATGGCAAATGGCCCAATTTAA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
3UTR CAA 72 bp TTGGTCCTTATTCATCTTGATATACTCATGGGATGTTaGGAATTAAGGAGCCCAAACTACCTTACTTGCATT +
Preference number: 4 (lower is better)
Translates to: LVLIHLDILMGC*ELRSPNYLTCI
Trigger: AATGCAAGTAAGGTAGTTTGGGCTCCTTAATTCCAAACATCCCATGAGTATATCAAGATGAATAAGGACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR GCA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAAAATCGGGATATTCTaGAAGACCAGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: PQSLMGYCITLELVLLGLKIGIF*KTSVIH
Trigger: ATGAATTACACTGGTCTTGCAGAATATCCCGATTTT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS TCA 90 bp ATTCGGCATAGCAGAGGCCAGCCATCACTGAAGCCAGGGCAGCAATaGGGAAGGACACCACGATGCTGGGGCCCGAGTCTGCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: IRHSRGQPSLKPGQQ*GRTPRCWGPSLPWP
Trigger: TGGCCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTCTGCTATGCCGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS GCA 90 bp AGAAGGGAGGGGCAGAAGAGGGTCCGCATGCTGAAGCCCTGTCTCTaGAGCATGGTGACCTGGGACTCACTCTTCGAGGTTACCCTGGGA +
Preference number: 5 (lower is better)
Translates to: RREGQKRVRMLKPCL*SMVTWDSLFEVTLG
Trigger: TCCCAGGGTAACCTCGAAGAGTGAGTCCCAGGTCACCATGCTGCAGAGACAGGGCTTCAGCATGCGGACCCTCTTCTGCCCCTCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGGGCCCGAGTCTGCCTaGGCCACCTCCCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQGPESA*ATSPAR
Trigger: CCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCCC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS TCA 90 bp CAAGAAACAGCGCGAGGAGAGCGAGGCTCCAGGCCTCCAGCCTGGTaGTGGCATGAACTCCGTAAGTGGTCAAGACACTCAGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: QETARGERGSRPPAW*WHELRKWSRHSGPT
Trigger: TGTTGGGCCTGAGTGTCTTGACCACTTACGGAGTTCATGCCATCACCAGGCTGGAGGCCTGGAGCCTCGCTCTCCTCGCGCTGTTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGGGCCCGAGTCTGCCTaGGCCACCTCCCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCGPESA*ATSPAR
Trigger: CCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCCC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGGGCCCGAGTCTGCCTaGGCCACCTCCCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVGPESA*ATSPAR
Trigger: CCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCCC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGCGACTGGGGCTGGGTaGGGGTCGCGCCAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVATGAG*GSRQEG
Trigger: GCCTTCTTGGCGCGACCCCAACCCAGCCCCAGTCGC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522656.5
CDS TCA 90 bp GGACATAAACCCCGGCCCCAAGGGTGCTTCCAACGCCCAGGGCAATaGGGTCCATGGTGGATAAGCAGCGGCATAATTTGGTGTCTTCTA +
Preference number: 5 (lower is better)
Translates to: GHKPRPQGCFQRPGQ*GPWWISSGIIWCLL
Trigger: TAGAAGACACCAAATTATGCCGCTGCTTATCCACCATGGACCTCATTGCCCTGGGCGTTGGAAGCACCCTTGGGGCCGGGGTTTATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS GCA 90 bp AGGAAAGCTAGGAATCCTACCAGAAAGCTCACGAGAGAAGCTGACTaGTGTGTTGGCAGAAGGGAGGGGCAGAAGAGGGTCCGCATGCTG +
Preference number: 5 (lower is better)
Translates to: RKARNPTRKLTREAD*CVGRREGQKRVRML
Trigger: CAGCATGCGGACCCTCTTCTGCCCCTCCCTTCTGCCAACACAGCAGTCAGCTTCTCTCGTGAGCTTTCTGGTAGGATTCCTAGCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGGCGACAGGAGAAACTaGCTGTCGCAAACCGGTGGG +
Preference number: 5 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAGDRRN*LSQTGG
Trigger: CCCACCGGTTTGCGACAGCAAGTTTCTCCTGTCGCC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS CCA 90 bp GACTTGTTGACAAGGCGCAGAGAGAACCAGCTGCGACGACATATTTaGCAGGACCCCATCCCACATATTCAAACGCTACAGGAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: DLLTRRRENQLRRHI*QDPIPHIQTLQEGG
Trigger: GCCCCCTTCCTGTAGCGTTTGAATATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGCGCCTTGTCAACAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATGGCGACAGGAGAAACTaGCTGTCGCAAACCGGTGGG +
Preference number: 5 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHGDRRN*LSQTGG
Trigger: CCCACCGGTTTGCGACAGCAAGTTTCTCCTGTCGCC...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGGGCCCGAGTCTGCCTaGGCCACCTCCCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLGPESA*ATSPAR
Trigger: CCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCCC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTATGCAGACCCCGTCTaGGGAACACGGGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHYADPV*GTRAPN
Trigger: ATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCATA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTATGCAGACCCCGTCTaGGGAACACGGGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQYADPV*GTRAPN
Trigger: ATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCATA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGCTGCGACGACATATTaGGCAGGACCCCATCCCACA +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNAATTY*AGPHPT
Trigger: TGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGCTGCGACGACATATTaGGCAGGACCCCATCCCACA +
Preference number: 5 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGAATTY*AGPHPT
Trigger: TGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAAGCTGACTGCTGTGTaGGCAGAAGGGAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHKLTAV*AEGRGR
Trigger: TCTGCCCCTCCCTTCTGCCAACACAGCAGTCAGCTT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAAGCTGACTGCTGTGTaGGCAGAAGGGAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQKLTAV*AEGRGR
Trigger: TCTGCCCCTCCCTTCTGCCAACACAGCAGTCAGCTT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGCTGCGACGACATATTaGGCAGGACCCCATCCCACA +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLAATTY*AGPHPT
Trigger: TGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAAGCTGACTGCTGTGTaGGCAGAAGGGAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCKLTAV*AEGRGR
Trigger: TCTGCCCCTCCCTTCTGCCAACACAGCAGTCAGCTT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAAGCTGACTGCTGTGTaGGCAGAAGGGAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLKLTAV*AEGRGR
Trigger: TCTGCCCCTCCCTTCTGCCAACACAGCAGTCAGCTT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTTTCCCAACTGGGTCTaGGTGAGACACGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHFPNWV*VRHVAQ
Trigger: CTGTGCCACGTGTCTCACCAAGACCCAGTTGGGAAA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTTTCCCAACTGGGTCTaGGTGAGACACGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQFPNWV*VRHVAQ
Trigger: CTGTGCCACGTGTCTCACCAAGACCCAGTTGGGAAA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGCTGCGACGACATATTaGGCAGGACCCCATCCCACA +
Preference number: 5 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRAATTY*AGPHPT
Trigger: TGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGCTGCGACGACATATTaGGCAGGACCCCATCCCACA +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVAATTY*AGPHPT
Trigger: TGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGTGTAGAGACAGGGTCTaGCTATGCTACTCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMCRDRV*LCYSGR
Trigger: CCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTACA...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGACTGTCATCATGGGTATaGGAGGCCGATGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGLSSWV*EADGFS
Trigger: GGAAAAGCCATCGGCCTCCAATACCCATGATGACAG...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCTGTCATCATGGGTATaGGAGGCCGATGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLSSWV*EADGFS
Trigger: GGAAAAGCCATCGGCCTCCAATACCCATGATGACAG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCTGTCATCATGGGTATaGGAGGCCGATGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQLSSWV*EADGFS
Trigger: GGAAAAGCCATCGGCCTCCAATACCCATGATGACAG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTTTCCCAACTGGGTCTaGGTGAGACACGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCFPNWV*VRHVAQ
Trigger: CTGTGCCACGTGTCTCACCAAGACCCAGTTGGGAAA...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGCCCAGAAGACTTGTaGACAAGGCGCAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNSPEDL*TRRREN
Trigger: GTTCTCTCTGCGCCTTGTCAACAAGTCTTCTGGGCT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATCCTGTGGGGCTGGGTaGGGGTCGCGCCAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLSCGAG*GSRQEG
Trigger: GCCTTCTTGGCGCGACCCCAACCCAGCCCCACAGGA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494857.6
CDS-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAAGCAGCGGCATAATTaGGTGTCTTCTAGACTGTCC +
Preference number: 5 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAKQRHN*VSSRLS
Trigger: GGACAGTCTAGAAGACACCAAATTATGCCGCTGCTT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATATGCAGACCCCGTCTaGGGAACACGGGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSYADPV*GTRAPN
Trigger: ATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCATA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACTGCCACTCCAGGCTCTaGCAACACTTGATGTACCTA +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNCHSRL*QHLMYL
Trigger: TAGGTACATCAAGTGTTGCAAGAGCCTGGAGTGGCA...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGGCATAAAAGCAAGTaGCAGCACCAGCCAACGTTC +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNRHKSK*QHQPTF
Trigger: GAACGTTGGCTGGTGCTGCAACTTGCTTTTATGCCT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGGATCCAAGAAGACTaGTTGACAAGGCGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQWIQED*LTRRRE
Trigger: CTCTCTGCGCCTTGTCAACAAGTCTTCTTGGATCCA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCATGAAGGCTACTTTTaGCTGATTCTGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNHEGYF*LILGLP
Trigger: AGGCAGCCCCAGAATCAGCAAAAAGTAGCCTTCATG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGCATGAAGGCTACTTTTaGCTGATTCTGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQHEGYF*LILGLP
Trigger: AGGCAGCCCCAGAATCAGCAAAAAGTAGCCTTCATG...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATTGTGCACCCTGGAAGTaGTGGAATGTCCGTAATGAG +
Preference number: 5 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHCAPWK*WNVRNE
Trigger: CTCATTACGGACATTCCACAACTTCCAGGGTGCACA...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGATGTGCACCCTGGAAGTaGTGGAATGTCCGTAATGAG +
Preference number: 5 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGCAPWK*WNVRNE
Trigger: CTCATTACGGACATTCCACAACTTCCAGGGTGCACA...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATGTAGAGACAGGGTCTaGCTATGCTACTCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRCRDRV*LCYSGR
Trigger: CCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTACA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCTGTCATCATGGGTATaGGAGGCCGATGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLLSSWV*EADGFS
Trigger: GGAAAAGCCATCGGCCTCCAATACCCATGATGACAG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATTTCCCAACTGGGTCTaGGTGAGACACGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVFPNWV*VRHVAQ
Trigger: CTGTGCCACGTGTCTCACCAAGACCCAGTTGGGAAA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS GCA 90 bp AAAGCAGAAATGACCCCTGCAGTCAACGTGGCAGCAACTGGTGACTaGCTCTTACTCACTCTGGCAAGAAATCTAAACAGTAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: KAEMTPAVNVAATGD*LLLTLARNLNSKPS
Trigger: GGATGGCTTACTGTTTAGATTTCTTGCCAGAGTGAGTAAGAGGCAGTCACCAGTTGCTGCCACGTTGACTGCAGGGGTCATTTCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAGGCATAAAAGCAAGTaGCAGCACCAGCCAACGTTC +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLRHKSK*QHQPTF
Trigger: GAACGTTGGCTGGTGCTGCAACTTGCTTTTATGCCT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACATCCAAGAAGACTTGTaGACAAGGCGCAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNIQEDL*TRRREN
Trigger: GTTCTCTCTGCGCCTTGTCAACAAGTCTTCTTGGAT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000004531.14
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATGGATCCAAGAAGACTaGTTGACAAGGCGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SSITGKGESESWHDFITPWIQED*LTRRRE
Trigger: CTCTCTGCGCCTTGTCAACAAGTCTTCTTGGATCCA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000004531.14
ENST00000494857.6
CDS-3UTR CAA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCATGAAGGCTACTTTTaGCTGATTCTGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMHEGYF*LILGLP
Trigger: AGGCAGCCCCAGAATCAGCAAAAAGTAGCCTTCATG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCATGAAGGCTACTTTTaGCTGATTCTGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLHEGYF*LILGLP
Trigger: AGGCAGCCCCAGAATCAGCAAAAAGTAGCCTTCATG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAATGTTTTCCTTGTCTaGGGATTACACGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGNVFLV*GLHGPA
Trigger: AGCTGGCCCGTGTAATCCCAAGACAAGGAAAACATT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAATGTTTTCCTTGTCTaGGGATTACACGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNNVFLV*GLHGPA
Trigger: AGCTGGCCCGTGTAATCCCAAGACAAGGAAAACATT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAATGTTTTCCTTGTCTaGGGATTACACGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQNVFLV*GLHGPA
Trigger: AGCTGGCCCGTGTAATCCCAAGACAAGGAAAACATT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAGCCCAGAAGACTTGTaGACAAGGCGCAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVSPEDL*TRRREN
Trigger: GTTCTCTCTGCGCCTTGTCAACAAGTCTTCTGGGCT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAGGCGACAGGAGAAACTaGCTGTCGCAAACCGGTGGG +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLGDRRN*LSQTGG
Trigger: CCCACCGGTTTGCGACAGCAAGTTTCTCCTGTCGCC...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAAGCAGCGGCATAATTaGGTGTCTTCTAGACTGTCC +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLKQRHN*VSSRLS
Trigger: GGACAGTCTAGAAGACACCAAATTATGCCGCTGCTT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCACTCCAGGCTCTaGCAACACTTGATGTACCTA +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVCHSRL*QHLMYL
Trigger: TAGGTACATCAAGTGTTGCAAGAGCCTGGAGTGGCA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCAGCCCCATAGATACTaGTTCCGTTTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLQPHRY*FRFQKV
Trigger: CACCTTCTGAAAACGGAACAAGTATCTATGGGGCTG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCAGCCCCATAGATACTaGTTCCGTTTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCQPHRY*FRFQKV
Trigger: CACCTTCTGAAAACGGAACAAGTATCTATGGGGCTG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAGGCATAAAAGCAAGTaGCAGCACCAGCCAACGTTC +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVRHKSK*QHQPTF
Trigger: GAACGTTGGCTGGTGCTGCAACTTGCTTTTATGCCT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCATCCAAGAAGACTTGTaGACAAGGCGCAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLIQEDL*TRRREN
Trigger: GTTCTCTCTGCGCCTTGTCAACAAGTCTTCTTGGAT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000004531.14
ENST00000494857.6
CDS-3UTR CAA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAAAGCTGACTGCTGTGTaGGCAGAAGGGAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLKLTAV*AEGRGR
Trigger: TCTGCCCCTCCCTTCTGCCAACACAGCAGTCAGCTT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGTTCATCTTTCCCTCTTaGCATGATGCTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMFIFPS*HDAAVA
Trigger: GGCTACAGCAGCATCATGCAAAGAGGGAAAGATGAA...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAAAACGAATGTTTTCCTaGTCTTGGGATTACACGGGC +
Preference number: 5 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGKRMFS*SWDYTG
Trigger: GCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGTGCACCCTGGAAGTaGTGGAATGTCCGTAATGAG +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVCAPWK*WNVRNE
Trigger: CTCATTACGGACATTCCACAACTTCCAGGGTGCACA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCACATCAGTTGGGTTTaGTACCCACCTAATGACATA +
Preference number: 5 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAHISWV*YPPNDI
Trigger: TATGTCATTAGGTGGGTACAAAACCCAACTGATGTG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAATGTAGGACTGCCATaGCCTTTTGGTGGTAATTCA +
Preference number: 5 (lower is better)
Translates to: LVLGLHGPASMPGNVHHANVGLP*PFGGNS
Trigger: TGAATTACCACCAAAAGGCAATGGCAGTCCTACATT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGAGAGAAGGCACTGTTTaGGCACTAGCAAAAAGGACA +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQREGTV*ALAKRT
Trigger: TGTCCTTTTTGCTAGTGCCAAAACAGTGCCTTCTCT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAGTCACAGAGGTCCCTaGGTCCTTATTCATCTTGAT +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNSHRGP*VLIHLD
Trigger: ATCAAGATGAATAAGGACCAAGGGACCTCTGTGACT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAAGCAGCGGCATAATTaGGTGTCTTCTAGACTGTCC +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVKQRHN*VSSRLS
Trigger: GGACAGTCTAGAAGACACCAAATTATGCCGCTGCTT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAGGCTCTTGCAACACTaGATGTACCTATCACATACG +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLRLLQH*MYLSHT
Trigger: CGTATGTGATAGGTACATCAAGTGTTGCAAGAGCCT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACAGCCCCATAGATACTaGTTCCGTTTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVQPHRY*FRFQKV
Trigger: CACCTTCTGAAAACGGAACAAGTATCTATGGGGCTG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAGGCATAAAAGCAAGTaGCAGCACCAGCCAACGTTC +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSRHKSK*QHQPTF
Trigger: GAACGTTGGCTGGTGCTGCAACTTGCTTTTATGCCT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCTTCTTCACCAGTTGTaGCAATGCAGTCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMLLHQL*QCSQIP
Trigger: TGGGATTTGACTGCATTGCAACAACTGGTGAAGAAG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCTTCTTCACCAGTTGTaGCAATGCAGTCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLLLHQL*QCSQIP
Trigger: TGGGATTTGACTGCATTGCAACAACTGGTGAAGAAG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGGAACTTCTTCACCAGTaGTTGCAATGCAGTCAAATC +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQELLHQ*LQCSQI
Trigger: GATTTGACTGCATTGCAACAACTGGTGAAGAAGTTC...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAATCCAAGAAGACTTGTaGACAAGGCGCAGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVIQEDL*TRRREN
Trigger: GTTCTCTCTGCGCCTTGTCAACAAGTCTTCTTGGAT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAGTCTGGGAGAGTCTGTaGGCTTATTTTAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGVWESL*AYFKSL
Trigger: AAGTGACTTAAAATAAGCCAACAGACTCTCCCAGAC...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATTCATCTTTCCCTCTTaGCATGATGCTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVFIFPS*HDAAVA
Trigger: GGCTACAGCAGCATCATGCAAAGAGGGAAAGATGAA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAAAACGAATGTTTTCCTaGTCTTGGGATTACACGGGC +
Preference number: 5 (lower is better)
Translates to: SSITGKGESESWHDFITPKRMFS*SWDYTG
Trigger: GCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTT...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTCTCTTAAATGACACTTaGGCTTTCGTTCTCTCAATG +
Preference number: 5 (lower is better)
Translates to: LVLGLHGPASMPGNVHHALLNDT*AFVLSM
Trigger: CATTGAGAGAACGAAAGCCAAAGTGTCATTTAAGAG...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTTGTGGTAACAGTTGCTaGAAGCGTATTAGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: LVLGLHGPASMPGNVHHACGNSC*KRIRRN
Trigger: ATTTCTCCTAATACGCTTCAAGCAACTGTTACCACA...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCCTTTGCTGGCATTATaGCTACGCGAATATCCATAC +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCPLLAL*LREYPY
Trigger: GTATGGATATTCGCGTAGCAATAATGCCAGCAAAGG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACATACTCATGGGATGTTaGGAATTAAGGAGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNILMGC*ELRSPN
Trigger: GTTTGGGCTCCTTAATTCCAAACATCCCATGAGTAT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAGTCACAGAGGTCCCTaGGTCCTTATTCATCTTGAT +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCSHRGP*VLIHLD
Trigger: ATCAAGATGAATAAGGACCAAGGGACCTCTGTGACT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAAGGCTCTTGCAACACTaGATGTACCTATCACATACG +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVRLLQH*MYLSHT
Trigger: CGTATGTGATAGGTACATCAAGTGTTGCAAGAGCCT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACTTCTTCACCAGTTGTaGCAATGCAGTCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLLHQL*QCSQIP
Trigger: TGGGATTTGACTGCATTGCAACAACTGGTGAAGAAG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGAACTTCTTCACCAGTaGTTGCAATGCAGTCAAATC +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLELLHQ*LQCSQI
Trigger: GATTTGACTGCATTGCAACAACTGGTGAAGAAGTTC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGAACTTCTTCACCAGTaGTTGCAATGCAGTCAAATC +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCELLHQ*LQCSQI
Trigger: GATTTGACTGCATTGCAACAACTGGTGAAGAAGTTC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAGATTACACGAGGCATaGGGAAAATGGATCCAAGAA +
Preference number: 5 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMRLHEA*GKWIQE
Trigger: TTCTTGGATCCATTTTCCCAATGCCTCGTGTAATCT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000004531.14
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAGATTACACGAGGCATaGGGAAAATGGATCCAAGAA +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCRLHEA*GKWIQE
Trigger: TTCTTGGATCCATTTTCCCAATGCCTCGTGTAATCT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000494857.6
ENST00000522656.5
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCGTCTGGGAGAGTCTGTaGGCTTATTTTAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLVWESL*AYFKSL
Trigger: AAGTGACTTAAAATAAGCCAACAGACTCTCCCAGAC...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGTCTGGGAGAGTCTGTaGGCTTATTTTAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCVWESL*AYFKSL
Trigger: AAGTGACTTAAAATAAGCCAACAGACTCTCCCAGAC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATTCATCTTTCCCTCTTaGCATGATGCTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSFIFPS*HDAAVA
Trigger: GGCTACAGCAGCATCATGCAAAGAGGGAAAGATGAA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCATCCAAAGCCCTTAAATaGGGCCATTTGCCATTTAAC +
Preference number: 5 (lower is better)
Translates to: SSITGKGESESWHDFITPSKALK*GHLPFN
Trigger: GTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGA...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTGTGAAGGGTCTATTCTaGATTGGGTATAGAATCAAA +
Preference number: 5 (lower is better)
Translates to: LVLGLHGPASMPGNVHHAVKGLF*IGYRIK
Trigger: TTTGATTCTATACCCAATCAAGAATAGACCCTTCAC...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGCACATCAGTTGGGTTTaGTACCCACCTAATGACATA +
Preference number: 5 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMHISWV*YPPNDI
Trigger: TATGTCATTAGGTGGGTACAAAACCCAACTGATGTG...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCAATGTAGGACTGCCATaGCCTTTTGGTGGTAATTCA +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCNVGLP*PFGGNS
Trigger: TGAATTACCACCAAAAGGCAATGGCAGTCCTACATT...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCAATGTAGGACTGCCATaGCCTTTTGGTGGTAATTCA +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLNVGLP*PFGGNS
Trigger: TGAATTACCACCAAAAGGCAATGGCAGTCCTACATT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATGTAGAGACAGGGTCTaGCTATGCTACTCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLCRDRV*LCYSGR
Trigger: CCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTACA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCTCCATACTTTCCCCCTaGATATTTAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLSILSP*IFKDMW
Trigger: CCACATGTCCTTAAATATCAAGGGGGAAAGTATGGA...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACCTTTGCTGGCATTATaGCTACGCGAATATCCATAC +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVPLLAL*LREYPY
Trigger: GTATGGATATTCGCGTAGCAATAATGCCAGCAAAGG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACGTGTTACCAGTTGGGTaGAGCAATAACAAAATGCAT +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNVLPVG*SNNKMH
Trigger: ATGCATTTTGTTATTGCTCAACCCAACTGGTAACAC...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCATACTCATGGGATGTTaGGAATTAAGGAGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLILMGC*ELRSPN
Trigger: GTTTGGGCTCCTTAATTCCAAACATCCCATGAGTAT...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAAGTCACAGAGGTCCCTaGGTCCTTATTCATCTTGAT +
Preference number: 5 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRSHRGP*VLIHLD
Trigger: ATCAAGATGAATAAGGACCAAGGGACCTCTGTGACT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CTTGTCTTGGGATTACACGGGCCAGCTAGCATGCCTGGTAATGTTCACCATGCTAGTCCAATGCCTTTGTaGGTTTTTACAGACATAGAA +
Preference number: 5 (lower is better)
Translates to: LVLGLHGPASMPGNVHHASPMPL*VFTDIE
Trigger: TTCTATGTCTGTAAAAACCAACAAAGGCATTGGACT...AGCATGGTGAACATTACCAGGCATGCTAGCTGGCCCGTGTAATCCCAAGACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACCTGAGTTATAACCACTaGTTTCTATCTTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNLSYNH*FLSSFQ
Trigger: CTGGAATGAAGATAGAAACAAGTGGTTATAACTCAG...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CAA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACTGCCACTCCAGGCTCTaGCAACACTTGATGTACCTA +
Preference number: 5 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHCHSRL*QHLMYL
Trigger: TAGGTACATCAAGTGTTGCAAGAGCCTGGAGTGGCA...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAAGGCATAAAAGCAAGTaGCAGCACCAGCCAACGTTC +
Preference number: 5 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLRHKSK*QHQPTF
Trigger: GAACGTTGGCTGGTGCTGCAACTTGCTTTTATGCCT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACCATGAAGGCTACTTTTaGCTGATTCTGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHHEGYF*LILGLP
Trigger: AGGCAGCCCCAGAATCAGCAAAAAGTAGCCTTCATG...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAGTCTGGGAGAGTCTGTaGGCTTATTTTAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVVWESL*AYFKSL
Trigger: AAGTGACTTAAAATAAGCCAACAGACTCTCCCAGAC...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATCCAAAGCCCTTAAATaGGGCCATTTGCCATTTAAC +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVSKALK*GHLPFN
Trigger: GTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAAACGAATGTTTTCCTaGTCTTGGGATTACACGGGC +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSKRMFS*SWDYTG
Trigger: GCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACACATCAGTTGGGTTTaGTACCCACCTAATGACATA +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVHISWV*YPPNDI
Trigger: TATGTCATTAGGTGGGTACAAAACCCAACTGATGTG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCCTCTTAAATGACACTTaGGCTTTCGTTCTCTCAATG +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCLLNDT*AFVLSM
Trigger: CATTGAGAGAACGAAAGCCAAAGTGTCATTTAAGAG...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAGAGAAGGCACTGTTTaGGCACTAGCAAAAAGGACA +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSREGTV*ALAKRT
Trigger: TGTCCTTTTTGCTAGTGCCAAAACAGTGCCTTCTCT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCAGTGTTACCAGTTGGGTaGAGCAATAACAAAATGCAT +
Preference number: 5 (lower is better)
Translates to: SSITGKGESESWHDFITPVLPVG*SNNKMH
Trigger: ATGCATTTTGTTATTGCTCAACCCAACTGGTAACAC...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAATACTCATGGGATGTTaGGAATTAAGGAGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRILMGC*ELRSPN
Trigger: GTTTGGGCTCCTTAATTCCAAACATCCCATGAGTAT...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGGTCCTTATTCATCTaGATATACTCATGGGATGTT +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQWSLFI*IYSWDV
Trigger: AACATCCCATGAGTATATCAAGATGAATAAGGACCA...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAATTTCTGTAGGGTTTaGGGCCCTATCAACAATTTT +
Preference number: 5 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHNFCRV*GPINNF
Trigger: AAAATTGTTGATAGGGCCCAAAACCCTACAGAAATT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GGGACACCAAAGATAAAGGGCCCATTAATCAGGTGTAGGCCAGAGAAACCCAACAATTTCTGTAGGGTTTaGGGCCCTATCAACAATTTT +
Preference number: 5 (lower is better)
Translates to: GTPKIKGPLIRCRPEKPNNFCRV*GPINNF
Trigger: AAAATTGTTGATAGGGCCCAAAACCCTACAGAAATT...GTTGGGTTTCTCTGGCCTACACCTGATTAATGGGCCCTTTATCTTTGGTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAGGATTCAGCCAGCCCTTCTATGAGTCACAGAGGTCCCTTGGTCCTTATTCATAGTCCAATGCCTTTGTaGGTTTTTACAGACATAGAA +
Preference number: 5 (lower is better)
Translates to: QDSASPSMSHRGPLVLIHSPMPL*VFTDIE
Trigger: TTCTATGTCTGTAAAAACCAACAAAGGCATTGGACT...ATGAATAAGGACCAAGGGACCTCTGTGACTCATAGAAGGGCTGGCTGAATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp AGCAAACCCATGACAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGACAAGTCCAATGCCTTaGTTGGTTTTTACAGACATA +
Preference number: 5 (lower is better)
Translates to: SKPMTTQHADDIPLRFTQTSPMP*LVFTDI
Trigger: TATGTCTGTAAAAACCAACAAAGGCATTGGACTTGT...CTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTGTCATGGGTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TGGGCCATTTGCCATTTAACAATGGAACAGGCCGTTCCTATCAGAACAGGGGGAACAAGTCCAATGCCTTaGTTGGTTTTTACAGACATA +
Preference number: 5 (lower is better)
Translates to: WAICHLTMEQAVPIRTGGTSPMP*LVFTDI
Trigger: TATGTCTGTAAAAACCAACAAAGGCATTGGACTTGT...TCCCCCTGTTCTGATAGGAACGGCCTGTTCCATTGTTAAATGGCAAATGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS TCA 90 bp ATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCTAAGACGATaGCCAGCTCTGCTCCTGCAAGTGTTAGAATTCACTTGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: IPLRFTQCRICMLRR*PALLLQVLEFTCLF
Trigger: GAAAAGACAAGTGAATTCTAACACTTGCAGGAGCAGAGCTGGTCATCGTCTTAGCATACATATCCTACACTGAGTAAACCGTAACGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
CDS TCA 90 bp TATAACCACTTGTTTCTATCTTCATTCCAGTTGCTAGTTTCGTGGTaGGACATCTGCTCTTTCTGTTTTGGGACTGTAAGGGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: YNHLFLSSFQLLVSW*DICSFCFGTVRAHC
Trigger: GCAGTGAGCCCTTACAGTCCCAAAACAGAAAGAGCAGATGTCTCACCACGAAACTAGCAACTGGAATGAAGATAGAAACAAGTGGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470360.5
CDS-3UTR CAA 90 bp AGCAGTATCACCGGAAAGGGAGAGTCAGAATCTTGGCATGATTTCATCACGCCACTGAGTTATAACCACTaGTTTCTATCTTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: SSITGKGESESWHDFITPLSYNH*FLSSFQ
Trigger: CTGGAATGAAGATAGAAACAAGTGGTTATAACTCAG...TGGCGTGATGAAATCATGCCAAGATTCTGACTCTCCCTTTCCGGTGATACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGAACTTCTTCACCAGTaGTTGCAATGCAGTCAAATC +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSELLHQ*LQCSQI
Trigger: GATTTGACTGCATTGCAACAACTGGTGAAGAAGTTC...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAGTGATTTCCCTCCTTAAATTGGGCCATTaGCCATTTAACAATGGAACA +
Preference number: 5 (lower is better)
Translates to: SPTAGGIDETSLHSVISLLKLGH*PFNNGT
Trigger: TGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAG...GAGGGAAATCACTGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGCGTGAAGGGTCTATTCTaGATTGGGTATAGAATCAAA +
Preference number: 5 (lower is better)
Translates to: PSMLMTSRYGLLSVGYVCVKGLF*IGYRIK
Trigger: TTTGATTCTATACCCAATCAAGAATAGACCCTTCAC...GCATACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCAAATGTAGGACTGCCATaGCCTTTTGGTGGTAATTCA +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSNVGLP*PFGGNS
Trigger: TGAATTACCACCAAAAGGCAATGGCAGTCCTACATT...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGACTCTTAAATGACACTTaGGCTTTCGTTCTCTCAATG +
Preference number: 5 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRLLNDT*AFVLSM
Trigger: CATTGAGAGAACGAAAGCCAAAGTGTCATTTAAGAG...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTACTCTTAAATGACACTTaGGCTTTCGTTCTCTCAATG +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVLLNDT*AFVLSM
Trigger: CATTGAGAGAACGAAAGCCAAAGTGTCATTTAAGAG...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGTGGTAACAGTTGCTaGAAGCGTATTAGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVCGNSC*KRIRRN
Trigger: ATTTCTCCTAATACGCTTCAAGCAACTGTTACCACA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGATGTGGTAACAGTTGCTaGAAGCGTATTAGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRCGNSC*KRIRRN
Trigger: ATTTCTCCTAATACGCTTCAAGCAACTGTTACCACA...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCATCCATACTTTCCCCCTaGATATTTAAGGACATGTGG +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSSILSP*IFKDMW
Trigger: CCACATGTCCTTAAATATCAAGGGGGAAAGTATGGA...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GTGACAACAGCAAGGATTTATGAGCATGCCTACAGTCCCTACCAAAATACCCGAGTGTTACCAGTTGGGTaGAGCAATAACAAAATGCAT +
Preference number: 5 (lower is better)
Translates to: VTTARIYEHAYSPYQNTRVLPVG*SNNKMH
Trigger: ATGCATTTTGTTATTGCTCAACCCAACTGGTAACAC...TCGGGTATTTTGGTAGGGACTGTAGGCATGCTCATAAATCCTTGCTGTTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGAGTCCAATGCCTTTGTaGGTTTTTACAGACATAGAA +
Preference number: 5 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMSPMPL*VFTDIE
Trigger: TTCTATGTCTGTAAAAACCAACAAAGGCATTGGACT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CATGTGCACCCTGGAAGTTGTGGAATGTCCGTAATGAGTTCTGTGTCATGGATGACAAGTCCAATGCCTTaGTTGGTTTTTACAGACATA +
Preference number: 5 (lower is better)
Translates to: HVHPGSCGMSVMSSVSWMTSPMP*LVFTDI
Trigger: TATGTCTGTAAAAACCAACAAAGGCATTGGACTTGT...CATCCATGACACAGAACTCATTACGGACATTCCACAACTTCCAGGGTGCACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAGGCTCTTGCAACACTaGATGTACCTATCACATACG +
Preference number: 5 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHRLLQH*MYLSHT
Trigger: CGTATGTGATAGGTACATCAAGTGTTGCAAGAGCCT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACAGCCCCATAGATACTaGTTCCGTTTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLQPHRY*FRFQKV
Trigger: CACCTTCTGAAAACGGAACAAGTATCTATGGGGCTG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATTCATCTTTCCCTCTTaGCATGATGCTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLFIFPS*HDAAVA
Trigger: GGCTACAGCAGCATCATGCAAAGAGGGAAAGATGAA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACAGAGAAGGCACTGTTTaGGCACTAGCAAAAAGGACA +
Preference number: 5 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHREGTV*ALAKRT
Trigger: TGTCCTTTTTGCTAGTGCCAAAACAGTGCCTTCTCT...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTACCTTTGCTGGCATTATaGCTACGCGAATATCCATAC +
Preference number: 5 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLPLLAL*LREYPY
Trigger: GTATGGATATTCGCGTAGCAATAATGCCAGCAAAGG...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTATGGTCCTTATTCATCTaGATATACTCATGGGATGTT +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVWSLFI*IYSWDV
Trigger: AACATCCCATGAGTATATCAAGATGAATAAGGACCA...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CAACCCAGCATGCTGATGACATCCCGTTACGGTTTACTCAGTGTAGGATATGTAACAAGTCCAATGCCTTaGTTGGTTTTTACAGACATA +
Preference number: 5 (lower is better)
Translates to: QPSMLMTSRYGLLSVGYVTSPMP*LVFTDI
Trigger: TATGTCTGTAAAAACCAACAAAGGCATTGGACTTGT...TACATATCCTACACTGAGTAAACCGTAACGGGATGTCATCAGCATGCTGGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS GCA 90 bp TCTTGGGTGATGGTCATTTGCTTGAATGGCAGATTTTTCTTCTGCTaGTGCATGAACGTTGTCTGGATAAGCATCTTCTTCATTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SWVMVICLNGRFFFC*CMNVVWISIFFIVF
Trigger: GAAAACAATGAAGAAGATGCTTATCCAGACAACGTTCATGCAGCAGCAGAAGAAAAATCTGCCATTCAAGCAAATGACCATCACCCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS-3UTR CAA 90 bp TCAAAGCCCACCATAAACCCAACTTACTTATACACTGACGTTAGAGATACACACGAACTTCTTCACCAGTaGTTGCAATGCAGTCAAATC +
Preference number: 5 (lower is better)
Translates to: SKPTINPTYLYTDVRDTHELLHQ*LQCSQI
Trigger: GATTTGACTGCATTGCAACAACTGGTGAAGAAGTTC...GTGTGTATCTCTAACGTCAGTGTATAAGTAAGTTGGGTTTATGGTGGGCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp GCTACTAGTATTTCCCCAACTGCAGGGGGCATAGATGAAACCTCTTTACATTCACTTAAATTGGGCCATTaGCCATTTAACAATGGAACA +
Preference number: 5 (lower is better)
Translates to: ATSISPTAGGIDETSLHSLKLGH*PFNNGT
Trigger: TGTTCCATTGTTAAATGGCAAATGGCCCAATTTAAG...TGAATGTAAAGAGGTTTCATCTATGCCCCCTGCAGTTGGGGAAATACTAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATCCAAAGCCCTTAAATaGGGCCATTTGCCATTTAAC +
Preference number: 5 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLSKALK*GHLPFN
Trigger: GTTAAATGGCAAATGGCCCAATTTAAGGGCTTTGGA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAAAACGAATGTTTTCCTaGTCTTGGGATTACACGGGC +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLKRMFS*SWDYTG
Trigger: GCCCGTGTAATCCCAAGACAAGGAAAACATTCGTTT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTACCTTTGCTGGCATTATaGCTACGCGAATATCCATAC +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLPLLAL*LREYPY
Trigger: GTATGGATATTCGCGTAGCAATAATGCCAGCAAAGG...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS GCA 90 bp ATTTCTTGGGTGATGGTCATTTGCTTGAATGGCAGATTTTTCTTCTaGTGCTGCATGAACGTTGTCTGGATAAGCATCTTCTTCATTGTT +
Preference number: 5 (lower is better)
Translates to: ISWVMVICLNGRFFF*CCMNVVWISIFFIV
Trigger: AACAATGAAGAAGATGCTTATCCAGACAACGTTCATGCAGCAGCAGAAGAAAAATCTGCCATTCAAGCAAATGACCATCACCCAAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS-3UTR CAA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATGTGGTAACAGTTGCTaGAAGCGTATTAGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLCGNSC*KRIRRN
Trigger: ATTTCTCCTAATACGCTTCAAGCAACTGTTACCACA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTAATACTCATGGGATGTTaGGAATTAAGGAGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLILMGC*ELRSPN
Trigger: GTTTGGGCTCCTTAATTCCAAACATCCCATGAGTAT...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS TCA 90 bp CTGCAAGTGTTAGAATTCACTTGTCTTTTCATGGAATATGAAAGGTaGACTGAGATTTCTTGGGTGATGGTCATTTGCTTGAATGGCAGA +
Preference number: 5 (lower is better)
Translates to: LQVLEFTCLFMEYER*TEISWVMVICLNGR
Trigger: TCTGCCATTCAAGCAAATGACCATCACCCAAGAAATCTCAGTTCACCTTTCATATTCCATGAAAAGACAAGTGAATTCTAACACTTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS-3UTR CAA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTATGGTCCTTATTCATCTaGATATACTCATGGGATGTT +
Preference number: 5 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLWSLFI*IYSWDV
Trigger: AACATCCCATGAGTATATCAAGATGAATAAGGACCA...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp TTGGGTATAGAATCAAACGGGTTTTCAGCGTACTGTGACAACAGCAAGGATTTAAATTTCTGTAGGGTTTaGGGCCCTATCAACAATTTT +
Preference number: 5 (lower is better)
Translates to: LGIESNGFSAYCDNSKDLNFCRV*GPINNF
Trigger: AAAATTGTTGATAGGGCCCAAAACCCTACAGAAATT...TAAATCCTTGCTGTTGTCACAGTACGCTGAAAACCCGTTTGATTCTATACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS-3UTR CAA 90 bp CCCCAATCACTGATGGGTTATTGTATAACACTGGAGCTTGTATTATTAGGCTTATGGTCCTTATTCATCTaGATATACTCATGGGATGTT +
Preference number: 5 (lower is better)
Translates to: PQSLMGYCITLELVLLGLWSLFI*IYSWDV
Trigger: AACATCCCATGAGTATATCAAGATGAATAAGGACCA...TAAGCCTAATAATACAAGCTCCAGTGTTATACAATAACCCATCAGTGATTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
CDS TCA 72 bp AGCAGAGGCCAGCCATCACTGAAGCCAGGGCAGCAATaGGGAAGGACACCACGATGCTGGGGCCCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: SRGQPSLKPGQQ*GRTPRCWGPSL
Trigger: CAGACTCGGGCCCCAGCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS TCA 72 bp GGGCAAAGGTCAGCGCGGCTCTGCAAGGAATCATTCTaGCGTCTGACGAAGGCGACTGGGGCTGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: GQRSARLCKESF*RLTKATGAGLG
Trigger: CCCCAACCCAGCCCCAGTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCAGAGCCGCGCTGACCTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522656.5
CDS TCA 72 bp CCCCGGCCCCAAGGGTGCTTCCAACGCCCAGGGCAATaGGGTCCATGGTGGATAAGCAGCGGCATAATTTGG +
Preference number: 6 (lower is better)
Translates to: PRPQGCFQRPGQ*GPWWISSGIIW
Trigger: CCAAATTATGCCGCTGCTTATCCACCATGGACCTCATTGCCCTGGGCGTTGGAAGCACCCTTGGGGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS TCA 72 bp GCGCGAGGAGAGCGAGGCTCCAGGCCTCCAGCCTGGTaGTGGCATGAACTCCGTAAGTGGTCAAGACACTCA +
Preference number: 6 (lower is better)
Translates to: ARGERGSRPPAW*WHELRKWSRHS
Trigger: TGAGTGTCTTGACCACTTACGGAGTTCATGCCATCACCAGGCTGGAGGCCTGGAGCCTCGCTCTCCTCGCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS GCA 72 bp GGGCAGAAGAGGGTCCGCATGCTGAAGCCCTGTCTCTaGAGCATGGTGACCTGGGACTCACTCTTCGAGGTT +
Preference number: 6 (lower is better)
Translates to: GQKRVRMLKPCL*SMVTWDSLFEV
Trigger: AACCTCGAAGAGTGAGTCCCAGGTCACCATGCTGCAGAGACAGGGCTTCAGCATGCGGACCCTCTTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS TCA 72 bp GGGCAAAGGTCAGCGCGGCTCTGCAAGGAATCATTCTaGCGTCTGACGAAGGCGACCTGTAAGGGCTCACTG +
Preference number: 6 (lower is better)
Translates to: GQRSARLCKESF*RLTKATCKGSL
Trigger: CAGTGAGCCCTTACAGGTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCAGAGCCGCGCTGACCTTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494857.6
CDS GCA 72 bp CTGACGAAGGCGACCTGTAAGGGCTCACTGCTTTCCTaGTGGTCTTCAGAGAGTCTCCTGTGGGGCTGGGTT +
Preference number: 6 (lower is better)
Translates to: LTKATCKGSLLS*WSSESLLWGWV
Trigger: AACCCAGCCCCACAGGAGACTCTCTGAAGACCAGCAGGAAAGCAGTGAGCCCTTACAGGTCGCCTTCGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494857.6
CDS TCA 72 bp GGGCAAAGGTCAGCGCGGCTCTGCAAGGAATCATTCTaGCGTCTGACGAAGGCGACAGGAGAAACTTGCTGT +
Preference number: 6 (lower is better)
Translates to: GQRSARLCKESF*RLTKATGETCC
Trigger: ACAGCAAGTTTCTCCTGTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCAGAGCCGCGCTGACCTTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000640220.1
CDS CAA 90 bp AGACTTGTTGACAAGGCGCAGAGAGAACCAGCTGCGACGACATATTaGGCAGGACCCCATCCCACATATTCAAACGCTACAGGAAGGGGG +
Preference number: 6 (lower is better)
Translates to: RLVDKAQREPAATTY*AGPHPTYSNATGRG
Trigger: CCCCCTTCCTGTAGCGTTTGAATATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGCGCCTTGTCAACAAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS GCA 72 bp TTTCTGTTTTGGGACTGTAAGGGCTCACTGCTTTCCTaGTGGTCTTCAGAGAGTCTCCTGTGGGGCTGGGTT +
Preference number: 6 (lower is better)
Translates to: FLFWDCKGSLLS*WSSESLLWGWV
Trigger: AACCCAGCCCCACAGGAGACTCTCTGAAGACCAGCAGGAAAGCAGTGAGCCCTTACAGTCCCAAAACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470360.5
CDS CCA 72 bp ACAAGGCGCAGAGAGAACCAGCTGCGACGACATATTTaGCAGGACCCCATCCCACATATTCAAACGCTACAG +
Preference number: 6 (lower is better)
Translates to: TRRRENQLRRHI*QDPIPHIQTLQ
Trigger: CTGTAGCGTTTGAATATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGCGCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS CAA 72 bp GACAAGGCGCAGAGAGAACCAGCTGCGACGACATATTaGGCAGGACCCCATCCCACATATTCAAACGCTACA +
Preference number: 6 (lower is better)
Translates to: DKAQREPAATTY*AGPHPTYSNAT
Trigger: TGTAGCGTTTGAATATGTGGGATGGGGTCCTGCCAAATATGTCGTCGCAGCTGGTTCTCTCTGCGCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS CAA 90 bp ACGCCCAGGGCAATGAGGTCCATGGTGGATAAGCAGCGGCATAATTaGGTGTCTTCTAGACTGTCCAGGGTCACGATTTTTCTCCGGATC +
Preference number: 6 (lower is better)
Translates to: TPRAMRSMVDKQRHN*VSSRLSRVTIFLRI
Trigger: GATCCGGAGAAAAATCGTGACCCTGGACAGTCTAGAAGACACCAAATTATGCCGCTGCTTATCCACCATGGACCTCATTGCCCTGGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS TCA 72 bp CTACTTTTTGCTGATTCTGGGGCTGCCTCCAGATGGTaGGAACGATGGCAACGAAGAGAACAAGAAACAGCG +
Preference number: 6 (lower is better)
Translates to: LLFADSGAASRW*ERWQRREQETA
Trigger: CGCTGTTTCTTGTTCTCTTCGTTGCCATCGTTCTCACCATCTGGAGGCAGCCCCAGAATCAGCAAAAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS GCA 72 bp ATGACCCCTGCAGTCAACGTGGCAGCAACTGGTGACTaGCTCTTACTCACTCTGGCAAGAAATCTAAACAGT +
Preference number: 6 (lower is better)
Translates to: MTPAVNVAATGD*LLLTLARNLNS
Trigger: ACTGTTTAGATTTCTTGCCAGAGTGAGTAAGAGGCAGTCACCAGTTGCTGCCACGTTGACTGCAGGGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS TCA 72 bp AGAAATGACCCCTGCAGTCAACGTGGCAGCAACTGGTaGCTGCCTCTTACTCACTCTGGCAAGAAATCTAAA +
Preference number: 6 (lower is better)
Translates to: RNDPCSQRGSNW*LPLTHSGKKSK
Trigger: TTTAGATTTCTTGCCAGAGTGAGTAAGAGGCAGTCACCAGTTGCTGCCACGTTGACTGCAGGGGTCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398090.3
ENST00000470360.5
CDS TCA 72 bp AATGGTAAGAATGGAACCATGAAGGCTACTTTTTGCTaGTTCTGGGGCTGCCTCCAGATGGTGAGAACGATG +
Preference number: 6 (lower is better)
Translates to: NGKNGTMKATFC*FWGCLQMVRTM
Trigger: CATCGTTCTCACCATCTGGAGGCAGCCCCAGAATCAGCAAAAAGTAGCCTTCATGGTTCCATTCTTACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS CAA 72 bp GCAATGAGGTCCATGGTGGATAAGCAGCGGCATAATTaGGTGTCTTCTAGACTGTCCAGGGTCACGATTTTT +
Preference number: 6 (lower is better)
Translates to: AMRSMVDKQRHN*VSSRLSRVTIF
Trigger: AAAAATCGTGACCCTGGACAGTCTAGAAGACACCAAATTATGCCGCTGCTTATCCACCATGGACCTCATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS GCA 72 bp GTGATGGTCATTTGCTTGAATGGCAGATTTTTCTTCTaGTGCTGCATGAACGTTGTCTGGATAAGCATCTTC +
Preference number: 6 (lower is better)
Translates to: VMVICLNGRFFF*CCMNVVWISIF
Trigger: GAAGATGCTTATCCAGACAACGTTCATGCAGCAGCAGAAGAAAAATCTGCCATTCAAGCAAATGACCATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1
CDS TCA 72 bp TTGTTTCTATCTTCATTCCAGTTGCTAGTTTCGTGGTaGGACATCTGCTCTTTCTGTTTTGGGACTGTAAGG +
Preference number: 6 (lower is better)
Translates to: LFLSSFQLLVSW*DICSFCFGTVR
Trigger: CCTTACAGTCCCAAAACAGAAAGAGCAGATGTCTCACCACGAAACTAGCAACTGGAATGAAGATAGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470360.5
CDS CAA 72 bp TCAGAAGGTGGCTCTCTGGCACTTGCTGATATATTTTaGAGAAACTCTTCACTAATCTTCCAGTTTGCCACA +
Preference number: 6 (lower is better)
Translates to: SEGGSLALADIF*RNSSLIFQFAT
Trigger: TGTGGCAAACTGGAAGATTAGTGAAGAGTTTCTCAAAAATATATCAGCAAGTGCCAGAGAGCCACCTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000004531.14
ENST00000398090.3
ENST00000470360.5
ENST00000494857.6
ENST00000522656.5
ENST00000640220.1