RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC7A14 (Homo sapiens)

Ensembl gene IDs: ENSG00000013293

Ensembl transcript IDs: ENST00000231706.6, ENST00000466168.1

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAATGATGCTTGCTCAGGAAGTGCCAATGCCCATCTACCCACCCTaGCCTCGGGGAGCAGCACTCAGCCTGACATGCCAAGAACAGAGC +
Preference number: 1 (lower is better)
Translates to: KMMLAQEVPMPIYPP*PRGAALSLTCQEQS
Trigger: GCTCTGTTCTTGGCATGTCAGGCTGAGTGCTGCTCCCCGAGGTCAGGGTGGGTAGATGGGCATTGGCACTTCCTGAGCAAGCATCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp GGTTACCTGCTGGTGCCTCTCTCTCTTAGGATCTCCAGAGGTCTTTaGAGACACGTGGGTCCTCAGTTTCAGGGAGCTACACAGGTACAG +
Preference number: 1 (lower is better)
Translates to: GYLLVPLSLRISRGL*RHVGPQFQGATQVQ
Trigger: CTGTACCTGTGTAGCTCCCTGAAACTGAGGACCCACGTGTCTGCAAAGACCTCTGGAGATCCTAAGAGAGAGAGGCACCAGCAGGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 90 bp TGGTGCCTCTCTCTCTTAGGATCTCCAGAGGTCTTTGCAGACACGTaGGTCCTCAGTTTCAGGGAGCTACACAGGTACAGGGGAAGCAGA +
Preference number: 1 (lower is better)
Translates to: WCLSLLGSPEVFADT*VLSFRELHRYRGSR
Trigger: TCTGCTTCCCCTGTACCTGTGTAGCTCCCTGAAACTGAGGACCCACGTGTCTGCAAAGACCTCTGGAGATCCTAAGAGAGAGAGGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp CTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTTTCTaGACTTGCTCACTGTTGAATTTCAAATACTCTTTCGTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LVPACGGACGLGCCF*TCSLLNFKYSFVAR
Trigger: CCTGGCCACGAAAGAGTATTTGAAATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 90 bp GTGGGGCCTGCGGTTTGGGATGCTGTTTCTGCACTTGCTCACTGTTaGATTTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCT +
Preference number: 1 (lower is better)
Translates to: VGPAVWDAVSALAHC*ISNTLSWPGHHWLP
Trigger: AGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAAATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp GGCTCCAGTGCTGCTCATCCATGGACTGTAGCCCCCAAGGGCAAGTaGCATGCTTCTATTCATTCCTGTCACTTAGCATTGGGTCTATTC +
Preference number: 1 (lower is better)
Translates to: GSSAAHPWTVAPKGK*HASIHSCHLALGLF
Trigger: GAATAGACCCAATGCTAAGTGACAGGAATGAATAGAAGCATGGCACTTGCCCTTGGGGGCTACAGTCCATGGATGAGCAGCACTGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 90 bp GTAAACTCCTTGGTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTaGGGCCTGCGGTTTGGGATGCTGTTTCTGCACTTGCTCACTGTT +
Preference number: 1 (lower is better)
Translates to: VNSLVKLQLSGSCVW*GLRFGMLFLHLLTV
Trigger: AACAGTGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCACCAAGGAGTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 90 bp TCTTCCTTGACACGTCTTGTTCCAAACAGCATGAAAATGGAGCGCTaGCACACAGCCCTCGTGGCGACTTCTGGATGTGTTTCCTTTGCT +
Preference number: 1 (lower is better)
Translates to: SSLTRLVPNSMKMER*HTALVATSGCVSFA
Trigger: AGCAAAGGAAACACATCCAGAAGTCGCCACGAGGGCTGTGTGCCAGCGCTCCATTTTCATGCTGTTTGGAACAAGACGTGTCAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 90 bp AATTTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTaGTGCCTCTCTCTCTTAGGATCTCCAGAGGTCTTTGCAGACACG +
Preference number: 1 (lower is better)
Translates to: NFKYSFVARPPLVTC*CLSLLGSPEVFADT
Trigger: CGTGTCTGCAAAGACCTCTGGAGATCCTAAGAGAGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 90 bp ATTATTTCCCACTCTCTCACCCGAGGAAAGCCAGTCAGCTCAGTGTaGCATTCAAGTCTCTCTGTGAGTGATCCCTCACCTGCCTTCCTA +
Preference number: 1 (lower is better)
Translates to: IISHSLTRGKPVSSV*HSSLSVSDPSPAFL
Trigger: TAGGAAGGCAGGTGAGGGATCACTCACAGAGAGACTTGAATGTCACACTGAGCTGACTGGCTTTCCTCGGGTGAGAGAGTGGGAAATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp CTTGTCAAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTaGTCATCCATGGACTGTAGCCCCCAAGGGCAAGTGCCATGCTTC +
Preference number: 1 (lower is better)
Translates to: LVKFVVLSAFTRLQC*SSMDCSPQGQVPCF
Trigger: GAAGCATGGCACTTGCCCTTGGGGGCTACAGTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTTGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp AGACTTGTCAAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTaGTGCTCATCCATGGACTGTAGCCCCCAAGGGCAAGTGCCATGC +
Preference number: 1 (lower is better)
Translates to: RLVKFVVLSAFTRLQ*CSSMDCSPQGQVPC
Trigger: GCATGGCACTTGCCCTTGGGGGCTACAGTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTTGACAAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp TTGAATTTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTaGTGGTGCCTCTCTCTCTTAGGATCTCCAGAGGTCTTTGCAGAC +
Preference number: 1 (lower is better)
Translates to: LNFKYSFVARPPLVT*WCLSLLGSPEVFAD
Trigger: GTCTGCAAAGACCTCTGGAGATCCTAAGAGAGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAAATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 90 bp CAGCGAGAAATACTAAGTAAACTCCTTGGTGAAACTTCAGCTTTCTaGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTTTCT +
Preference number: 1 (lower is better)
Translates to: QREILSKLLGETSAF*FLRVVGPAVWDAVS
Trigger: AGAAACAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCACCAAGGAGTTTACTTAGTATTTCTCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 90 bp GCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTaGTATAAGAGAGGCCATGACAGAGAGTTAATTTCTGCCAATGCC +
Preference number: 1 (lower is better)
Translates to: APPLPAFIISPGAAV*YKRGHDRELISANA
Trigger: GGCATTGGCAGAAATTAACTCTCTGTCATGGCCTCTCTTATATCAGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp GATCCTCCTCCCTCAGTCTCTCAACTATCTGGGATCATAGGCACATaGCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGA +
Preference number: 1 (lower is better)
Translates to: DPPPSVSQLSGIIGT*HHTKLYFLYFLRAG
Trigger: TCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCTATGATCCCAGATAGTTGAGAGACTGAGGGAGGAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp GTCCTGTCATCAGATGATGTGACTACATGGAATGAGGACTATAGCTaGTCTCTTAAAAACCTGCAGCCCCCTCTCTCAGCCCAGACAGTT +
Preference number: 1 (lower is better)
Translates to: VLSSDDVTTWNEDYS*SLKNLQPPLSAQTV
Trigger: AACTGTCTGGGCTGAGAGAGGGGGCTGCAGGTTTTTAAGAGAGCAGCTATAGTCCTCATTCCATGTAGTCACATCATCTGATGACAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 90 bp TTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATaGACTGTAGCCCCCAAGGGCAAGTGCCATGCTTCTATTCATTCC +
Preference number: 1 (lower is better)
Translates to: LLFYLHLPGSSAAHP*TVAPKGKCHASIHS
Trigger: GGAATGAATAGAAGCATGGCACTTGCCCTTGGGGGCTACAGTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 90 bp CCCTGCTTGGGCTTCAACCAGCAAAGCAAAGGCCTAGGAAACATTTaGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATA +
Preference number: 1 (lower is better)
Translates to: PCLGFNQQSKGLGNI*YHQLWWLHLRWNFI
Trigger: TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCCTAGGCCTTTGCTTTGCTGGTTGAAGCCCAAGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp AAAACCTGCAGCCCCCTCTCTCAGCCCAGACAGTTGAGGTATTTATaGACCATCATAACATTAACAGCATCTTTGCTTTGGAAAGTGGGG +
Preference number: 1 (lower is better)
Translates to: KTCSPLSQPRQLRYL*TIITLTASLLWKVG
Trigger: CCCCACTTTCCAAAGCAAAGATGCTGTTAATGTTATGATGGTGCATAAATACCTCAACTGTCTGGGCTGAGAGAGGGGGCTGCAGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 90 bp GGGTTTATGATTTCTAGGGTAAATCCTCGCCTTTGGGAGTGTGAATaGGACAAGCGTATCAGCAACTGCCAAGACCAATCAATAGATGTG +
Preference number: 1 (lower is better)
Translates to: GFMISRVNPRLWECE*DKRISNCQDQSIDV
Trigger: CACATCTATTGATTGGTCTTGGCAGTTGCTGATACGCTTGTCTCATTCACACTCCCAAAGGCGAGGATTTACCCTAGAAATCATAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp AACAAACAACCTACTTTTTCAAGGCATATCAGTGCCATGAAATCATaGTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGT +
Preference number: 1 (lower is better)
Translates to: NKQPTFSRHISAMKS*STFARFHHITRSCS
Trigger: ACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACTGATATGCCTTGAAAAAGTAGGTTGTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp TACTTTTTCAAGGCATATCAGTGCCATGAAATCATGCTCCACCTTTaGCCGCTTTCATCATATCACCAGGAGCTGCAGTCTGATATAAGA +
Preference number: 1 (lower is better)
Translates to: YFFKAYQCHEIMLHL*PLSSYHQELQSDIR
Trigger: TCTTATATCAGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACTGATATGCCTTGAAAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp CACAAATTCTTAGCCAGAGGACCACAAACTAGTAGACCTTATTCATaGCGATCCTTTGCTTGGCATGCCTTTCTCTCATTTCTACTTGAT +
Preference number: 1 (lower is better)
Translates to: HKFLARGPQTSRPYS*RSFAWHAFLSFLLD
Trigger: ATCAAGTAGAAATGAGAGAAAGGCATGCCAAGCAAAGGATCGGCATGAATAAGGTCTACTAGTTTGTGGTCCTCTGGCTAAGAATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 90 bp GATTATAAAACAAACAACCTACTTTTTCAAGGCATATCAGTGCCATaGAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGA +
Preference number: 1 (lower is better)
Translates to: DYKTNNLLFQGISVP*NHAPPLPAFIISPG
Trigger: TCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACTGATATGCCTTGAAAAAGTAGGTTGTTTGTTTTATAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 90 bp ATCAATAGATGTGCATGGAACATTCTCTTCATCCCCAAATCAGAATaGACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATG +
Preference number: 1 (lower is better)
Translates to: INRCAWNILFIPKSE*TQSFKVCTAGEIHM
Trigger: CATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGTTCATTCTGATTTGGGGATGAAGAGAATGTTCCATGCACATCTATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 90 bp CACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTTTTATCTaGCTTACGATATCAATATCTGCCATAGTACATAATAGGCACTCC +
Preference number: 1 (lower is better)
Translates to: HQALFPLLLKSWIFI*LTISISAIVHNRHS
Trigger: GGAGTGCCTATTATGTACTATGGCAGATATTGATATCGTAAGTCAGATAAAAATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 90 bp TATCTGATTATAAAACAAACAACCTACTTTTTCAAGGCATATCAGTaGCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCAC +
Preference number: 1 (lower is better)
Translates to: YLIIKQTTYFFKAYQ*HEIMLHLCPLSSYH
Trigger: GTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACTGATATGCCTTGAAAAAGTAGGTTGTTTGTTTTATAATCAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 90 bp CGCCATTTATTTAAACAGATTTATCATGACCATTATGTAGGCATTTaGTTAGCTACTAGTTTGTTACTAAGAAGTAGAACTGGCACACGC +
Preference number: 1 (lower is better)
Translates to: RHLFKQIYHDHYVGI*LATSLLLRSRTGTR
Trigger: GCGTGTGCCAGTTCTACTTCTTAGTAACAAACTAGTAGCTAATCAAATGCCTACATAATGGTCATGATAAATCTGTTTAAATAAATGGCG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 90 bp TTAATTCCTAATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATaGTTAACTCTAGGGAAGAGAAAACATAGCATTGTCAAGCATGAT +
Preference number: 1 (lower is better)
Translates to: LIPNAVFHRVGTVSL*LTLGKRKHSIVKHD
Trigger: ATCATGCTTGACAATGCTATGTTTTCTCTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATTAGGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGGGCACACAGCCCTCGTaGCGACTTCTGGATGTGTTT +
Preference number: 2 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMGTQPS*RLLDVF
Trigger: AAACACATCCAGAAGTCGCCACGAGGGCTGTGTGCC...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGATCTCCAGAGGTCTTTaGAGACACGTGGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLISRGL*RHVGPQ
Trigger: CTGAGGACCCACGTGTCTGCAAAGACCTCTGGAGAT...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 90 bp TCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTTTCTGCACTaGCTCACTGTTGAATTTCAAATACTCTTTCGTGGCCAGGCCACC +
Preference number: 2 (lower is better)
Translates to: SCVWWGLRFGMLFLH*LTVEFQILFRGQAT
Trigger: GGTGGCCTGGCCACGAAAGAGTATTTGAAATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGCCCCACCACACGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 90 bp GGTGGGGCCTGCGGTTTGGGATGCTGTTTCTGCACTTGCTCACTGTaGAATTTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACC +
Preference number: 2 (lower is better)
Translates to: GGACGLGCCFCTCSL*NFKYSFVARPPLVT
Trigger: GGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAAATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGCCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGATGGTCCAGAGTCCCTaGACTTTGCTGGATCCTAAA +
Preference number: 2 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMMVQSP*TLLDPK
Trigger: TTTAGGATCCAGCAAAGTTCAGGGACTCTGGACCAT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGATCACTGGGTCTGCCTaGCTGCTTTATGGTGAATCT +
Preference number: 2 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLITGSA*LLYGES
Trigger: AGATTCACCATAAAGCAGTCAGGCAGACCCAGTGAT...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGGGCATATCAGTGCCATaGAATCATGCTCCACCTTTG +
Preference number: 2 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLGISVP*NHAPPL
Trigger: CAAAGGTGGAGCATGATTTCATGGCACTGATATGCC...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCTCTGCCCAGAGCCCCTaGTTGGGCTTCAACCAGCAA +
Preference number: 2 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKASAQSP*LGFNQQ
Trigger: TTGCTGGTTGAAGCCCAAGCAGGGGCTCTGGGCAGA...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTGCCCCCAAGGGCAAGTaGCATGCTTCTATTCATTCC +
Preference number: 2 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSAPKGK*HASIHS
Trigger: GGAATGAATAGAAGCATGGCACTTGCCCTTGGGGGC...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTCATGTCTCAGGTGACTaGAATTCTGCCTTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSHVSGD*NSAFCP
Trigger: TGGGCAGAAGGCAGAATTTCAGTCACCTGAGACATG...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTTGGTACCATCAGCTCTaGTGGTTGCACCTAAGATGG +
Preference number: 2 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSWYHQL*WLHLRW
Trigger: CCATCTTAGGTGCAACCACCAGAGCTGATGGTACCA...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 90 bp ATGTCTCAGGTGACTGAAATTCTGCCTTCTGCCCAGAGCCCCTGCTaGGGCTTCAACCAGCAAAGCAAAGGCCTAGGAAACATTTGGTAC +
Preference number: 2 (lower is better)
Translates to: MSQVTEILPSAQSPC*GFNQQSKGLGNIWY
Trigger: GTACCAAATGTTTCCTAGGCCTTTGCTTTGCTGGTTGAAGCCCAAGCAGGGGCTCTGGGCAGAAGGCAGAATTTCAGTCACCTGAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCCCAGGAGCTGCAGTCTaGTATAAGAGAGGCCATGAC +
Preference number: 2 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAPGAAV*YKRGHD
Trigger: GTCATGGCCTCTCTTATATCAGACTGCAGCTCCTGG...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGCAGAGAGTTAATTTCTaGCAATGCCCTTCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLQRVNF*QCPSGF
Trigger: AAAGCCAGAAGGGCATTGGCAGAAATTAACTCTCTG...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGTTCAAGGCATATCAGTaGCATGAAATCATGCTCCAC +
Preference number: 2 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMFKAYQ*HEIMLH
Trigger: GTGGAGCATGATTTCATGGCACTGATATGCCTTGAA...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGTTGTACGTATCTCAGTaGAGCCACAGGAATTCTTGT +
Preference number: 2 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMLYVSQ*SHRNSC
Trigger: ACAAGAATTCCTGTGGCTGCACTGAGATACGTACAA...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTGGCTTGTTAGTTCCTTaGATAGGTAAGGAAGCCACC +
Preference number: 2 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSGLLVP*IGKEAT
Trigger: GGTGGCTTCCTTACCTATGCAAGGAACTAACAAGCC...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTTCTTACCATATCACTaGGTCTGCCTGACTGCTTTA +
Preference number: 2 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLFLPYH*VCLTAL
Trigger: TAAAGCAGTCAGGCAGACCCAGTGATATGGTAAGAA...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTAATGTAGGTCTTCCTTaGACTCCCTTCAAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSNVGLP*TPFKGQ
Trigger: TTGCCCCTTGAAGGGAGTCCAAGGAAGACCTACATT...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCCCATCTACCCACCCTaGCCTCGGGGAGCAGCACTC +
Preference number: 2 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRPIYPP*PRGAAL
Trigger: GAGTGCTGCTCCCCGAGGTCAGGGTGGGTAGATGGG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCCCGCGGACTTTCCTCTaGCATCTTGGGCCCCTGGTA +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPPRTFL*HLGPLV
Trigger: TACCAGGGGCCCAAGATGTCAGAGGAAAGTCCGCGG...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGTGTGATCTCATGGAATaGAACTACCTAAGTCGCTAT +
Preference number: 2 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMCDLME*NYLSRY
Trigger: ATAGCGACTTAGGTAGTTGCATTCCATGAGATCACA...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 90 bp CCCCTGCTTGGGCTTCAACCAGCAAAGCAAAGGCCTAGGAAACATTaGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCAT +
Preference number: 2 (lower is better)
Translates to: PLLGLQPAKQRPRKH*VPSALVVAPKMEFH
Trigger: ATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCCTAGGCCTTTGCTTTGCTGGTTGAAGCCCAAGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACGAGCAGCACTCAGCCTaGCATGCCAAGAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDEQHSA*HAKNRA
Trigger: AGCTCTGTTCTTGGCATGTCAGGCTGAGTGCTGCTC...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCAGAGAATTTGCAATGTaGTCTCAGTGGCTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAREFAM*SQWLAH
Trigger: GTGAGCCAGCCACTGAGATCACATTGCAAATTCTCT...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCCCACGTTAAGATTTTaGCATTTTGCACTCCTATTT +
Preference number: 2 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMPTLRF*HFALLF
Trigger: AAATAGGAGTGCAAAATGGCAAAATCTTAACGTGGG...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGTTGTTCCAAACAGCATaGAAATGGAGCGCTGGCACA +
Preference number: 2 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTLFQTA*KWSAGT
Trigger: TGTGCCAGCGCTCCATTTTCATGCTGTTTGGAACAA...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCGAATTTGGGGAAGGCTaGATTTGTGAAATGAGAGCC +
Preference number: 2 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAEFGEG*ICEMRA
Trigger: GGCTCTCATTTCACAAATCCAGCCTTCCCCAAATTC...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGCTGCCAATGCCCTTCTaGCTTTTACCGCAAGATATG +
Preference number: 2 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTLPMPF*LLPQDM
Trigger: CATATCTTGCGGTAAAAGCCAGAAGGGCATTGGCAG...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAGCTATGACTAGGGATTaGATTTGGGGAAGGCTGGAT +
Preference number: 2 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKAMTRD*IWGRLD
Trigger: ATCCAGCCTTCCCCAAATTCAATCCCTAGTCATAGC...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCAAACGTTTGGCATACTaGTACATCCAGGAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAKRLAY*YIQERK
Trigger: CTTTCTCTCCTGGATGTATCAGTATGCCAAACGTTT...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTGGAGAGAGATTTCTTTaGAGGAGTTTGTGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSGERFL*RSLCFV
Trigger: AACAAAACACAAACTCCTTCAAAGAAATCTCTCTCC...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCGCCTGCGGTTTGGGATaGTGTTTCTGCACTTGCTCA +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPACGLG*CFCTCS
Trigger: TGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGC...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 90 bp GCATGCCAAGATGGCATGAGCCTCAGCCTTTCAGAAAGAACAGACTaGAGTGCTAGCGAATATGTTCTGGAAAACGTTTGGCATACTGAT +
Preference number: 2 (lower is better)
Translates to: ACQDGMSLSLSERTD*SASEYVLENVWHTD
Trigger: ATCAGTATGCCAAACGTTTTCCAGAACATATTCGCTAGCACTCAAGTCTGTTCTTTCTGAAAGGCTGAGGCTCATGCCATCTTGGCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 90 bp GCTGCTCTCTTAAAAACCTGCAGCCCCCTCTCTCAGCCCAGACAGTaGAGGTATTTATGCACCATCATAACATTAACAGCATCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: AALLKTCSPLSQPRQ*RYLCTIITLTASLL
Trigger: AAGCAAAGATGCTGTTAATGTTATGATGGTGCATAAATACCTCAACTGTCTGGGCTGAGAGAGGGGGCTGCAGGTTTTTAAGAGAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCTTTACCAGGCTCCAGTaGTGCTCATCCATGGACTGT +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPFTRLQ*CSSMDC
Trigger: ACAGTCCATGGATGAGCAGCACTGGAGCCTGGTAAA...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCGGGATCATAGGCACATaGCACCACACCAAGCTCTAT +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPGIIGT*HHTKLY
Trigger: ATAGAGCTTGGTGTGGTGGCATGTGCCTATGATCCC...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCGGCCTAGGAAACATTTaGTACCATCAGCTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSGLGNI*YHQLWW
Trigger: CCACCAGAGCTGATGGTACCAAATGTTTCCTAGGCC...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGGTTCTGGAAAACGTTTaGCATACTGATACATCCAGG +
Preference number: 2 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTVLENV*HTDTSR
Trigger: CCTGGATGTATCAGTATGCCAAACGTTTTCCAGAAC...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCCTAGCGAATATGTTCTaGAAAACGTTTGGCATACTG +
Preference number: 2 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKALANMF*KTFGIL
Trigger: CAGTATGCCAAACGTTTTCCAGAACATATTCGCTAG...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 90 bp ATATCACTGGGTCTGCCTGACTGCTTTATGGTGAATCTGAAACCATaGGGAAAATGGTCCAGAGTCCCTGAACTTTGCTGGATCCTAAAA +
Preference number: 2 (lower is better)
Translates to: ISLGLPDCFMVNLKP*GKWSRVPELCWILK
Trigger: TTTTAGGATCCAGCAAAGTTCAGGGACTCTGGACCATTTTCCCAATGGTTTCAGATTCACCATAAAGCAGTCAGGCAGACCCAGTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCTTCATGCCGATCCTTTaGTTGGCATGCCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPFMPIL*LACLSL
Trigger: GAGAGAAAGGCATGCCAAGCAAAGGATCGGCATGAA...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCCCAGTGCATCAGCCTaGAGACTTGTCAAGTTTGTT +
Preference number: 2 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSPSASA*RLVKFV
Trigger: AACAAACTTGACAAGTCTCCAGGCTGATGCACTGGG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCAGCCTCCCTAATAGCTaGGATTACAGGCATGCAACA +
Preference number: 2 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSSLPNS*DYRHAT
Trigger: TGTTGCATGCCTGTAATCCCAGCTATTAGGGAGGCT...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTTCCCCATGTCTCAGGTaGCTGAAATTCTGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSSPCLR*LKFCLL
Trigger: CAGAAGGCAGAATTTCAGTCACCTGAGACATGGGGA...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCATGCCAAGATGGCATaGGCCTCAGCCTTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRHAKMA*ASAFQK
Trigger: TTTCTGAAAGGCTGAGGCTCATGCCATCTTGGCATG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCGTCCGTCATCTCACCTaGCACATTCACTATTGTTCT +
Preference number: 2 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSVRHLT*HIHYCS
Trigger: AGAACAATAGTGAATGTGTCAGGTGAGATGACGGAC...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCGAAGCAGAGGCTCCATaGAGACTTTGGATAGAAACA +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPEAEAP*RLWIET
Trigger: TGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTC...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCATCATGCTCCACCTTTaGCCGCTTTCATCATATCAC +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPIMLHL*PLSSYH
Trigger: GTGATATGATGAAAGCGGGCAAAGGTGGAGCATGAT...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAATCATCAGGTATTTCTTaGATACACACTATATGCCAG +
Preference number: 2 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKSSGIS*IHTICQ
Trigger: CTGGCATATAGTGTGTATTCAAGAAATACCTGATGA...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCCACTACTCACTGACCTaGGGTTTATACTCCAATAGT +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPHYSLT*GLYSNS
Trigger: ACTATTGGAGTATAAACCTCAGGTCAGTGAGTAGTG...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAAGTGCCATGAAATCATaGTCCACCTTTGCCCGCTTT +
Preference number: 2 (lower is better)
Translates to: LCYFKPLPAWGKICSYHASAMKS*STFARF
Trigger: AAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACT...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCTTGGGATGCTGTTTCTaGACTTGCTCACTGTTGAAT +
Preference number: 2 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSLGCCF*TCSLLN
Trigger: ATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAA...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAGCAAATGACAGGCTATaGCTAGGGATTGAATTTGGG +
Preference number: 2 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAANDRL*LGIEFG
Trigger: CCCAAATTCAATCCCTAGTCATAGCCTGTCATTTGC...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAGATTGCAGGATAAAATaGTGCTTGCTCAGGAAGTGC +
Preference number: 2 (lower is better)
Translates to: LCYFKPLPAWGKICSYHADCRIK*CLLRKC
Trigger: GCACTTCCTGAGCAAGCATCATTTTATCCTGCAATC...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAGCACTCAGCCTGACATaGCAAGAACAGAGCTTTGTC +
Preference number: 2 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKALSLT*QEQSFV
Trigger: GACAAAGCTCTGTTCTTGGCATGTCAGGCTGAGTGC...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCTGGGTCTGCCTGACTaGTTTATGGTGAATCTGAAA +
Preference number: 2 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRLGLPD*FMVNLK
Trigger: TTTCAGATTCACCATAAAGCAGTCAGGCAGACCCAG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTGTTAATTTCTGCCAATaGCCTTCTGGCTTTTACCGC +
Preference number: 2 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSVNFCQ*PSGFYR
Trigger: GCGGTAAAAGCCAGAAGGGCATTGGCAGAAATTAAC...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTTACCATCAGCTCTGGTaGTTGCACCTAAGATGGAAT +
Preference number: 2 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSYHQLW*LHLRWN
Trigger: ATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTA...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGTGTGATCTCAGTGGCTaGCTCACTTCTCCTTGTAAA +
Preference number: 2 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKCDLSG*LTSPCK
Trigger: TTTACAAGGAGAAGTGAGCCAGCCACTGAGATCACA...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCCACACACCAATCAAGTaGTTGCCTATCTCAAAAACT +
Preference number: 2 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPHTPIK*LPISKT
Trigger: AGTTTTTGAGATAGGCAACCACTTGATTGGTGTGTG...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTAGCAAAAGTAGCAAATaGCAGGCTATGACTAGGGAT +
Preference number: 2 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSSKSSK*QAMTRD
Trigger: ATCCCTAGTCATAGCCTGTCATTTGCTACTTTTGCT...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCATATGTTAAAACCCAGTaGATCAGCCTGGAGACTTGT +
Preference number: 2 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAYVKTQ*ISLETC
Trigger: ACAAGTCTCCAGGCTGATGCACTGGGTTTTAACATA...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR GCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGGTTTGTTGTTTTATCTaGATTTACCAGGCTCCAGTG +
Preference number: 2 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKVCCFI*IYQAPV
Trigger: CACTGGAGCCTGGTAAATGCAGATAAAACAACAAAC...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGTTCAGAAGTGAAATGTaGTCTCATGGAATGCAACTA +
Preference number: 2 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRFRSEM*SHGMQL
Trigger: TAGTTGCATTCCATGAGATCACATTTCACTTCTGAA...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR TCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAACAGAAAGAACAGACTTaGGTGCTAGCGAATATGTTC +
Preference number: 2 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKQKEQT*VLANMF
Trigger: GAACATATTCGCTAGCACTCAAGTCTGTTCTTTCTG...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 90 bp CCACAGCACATTACAAGTCCGTCATCTCACCTGACACATTCACTATaGTTCTTTATTTATATATCCCATTTCCCCTATTTGATTTTCCTT +
Preference number: 2 (lower is better)
Translates to: PQHITSPSSHLTHSL*FFIYISHFPYLIFL
Trigger: AAGGAAAATCAAATAGGGGAAATGGGATATATAAATAAAGAACAATAGTGAATGTGTCAGGTGAGATGACGGACTTGTAATGTGCTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp CTTGCTCAGGAAGTGCCAATGCCCATCTACCCACCCTaGCCTCGGGGAGCAGCACTCAGCCTGACATGCCAA +
Preference number: 3 (lower is better)
Translates to: LAQEVPMPIYPP*PRGAALSLTCQ
Trigger: TTGGCATGTCAGGCTGAGTGCTGCTCCCCGAGGTCAGGGTGGGTAGATGGGCATTGGCACTTCCTGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 72 bp ACCCGCTGCGTAGACTCCGTAAGCAGACCCCCGCTCTaGCTTCAGACACATTTCCTGAGTTCTGACTTTTCC +
Preference number: 3 (lower is better)
Translates to: TRCVDSVSRPPL*LQTHFLSSDFS
Trigger: GGAAAAGTCAGAACTCAGGAAATGTGTCTGAAGCCAGAGCGGGGGTCTGCTTACGGAGTCTACGCAGCGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 72 bp TCCTTGGTGAAACTTCAGCTTTCTGGTTCCTGCGTGTaGTGGGGCCTGCGGTTTGGGATGCTGTTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: SLVKLQLSGSCV*WGLRFGMLFLH
Trigger: GTGCAGAAACAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCACCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp GGTAAACCTGTGTTTGGCCCTCCGCGGACTTTCCTCTaGCATCTTGGGCCCCTGGTAAAACCTAGTGCGAAA +
Preference number: 3 (lower is better)
Translates to: GKPVFGPPRTFL*HLGPLVKPSAK
Trigger: TTTCGCACTAGGTTTTACCAGGGGCCCAAGATGTCAGAGGAAAGTCCGCGGAGGGCCAAACACAGGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp CTGGTGCCTCTCTCTCTTAGGATCTCCAGAGGTCTTTaGAGACACGTGGGTCCTCAGTTTCAGGGAGCTACA +
Preference number: 3 (lower is better)
Translates to: LVPLSLRISRGL*RHVGPQFQGAT
Trigger: TGTAGCTCCCTGAAACTGAGGACCCACGTGTCTGCAAAGACCTCTGGAGATCCTAAGAGAGAGAGGCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp AAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTaGTGGTGCCTCTCTCTCTTAGGATCTCCAGAGGTC +
Preference number: 3 (lower is better)
Translates to: KYSFVARPPLVT*WCLSLLGSPEV
Trigger: GACCTCTGGAGATCCTAAGAGAGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 72 bp TATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATaGACTGTAGCCCCCAAGGGCAAGTGCCATGCTTCT +
Preference number: 3 (lower is better)
Translates to: YLHLPGSSAAHP*TVAPKGKCHAS
Trigger: AGAAGCATGGCACTTGCCCTTGGGGGCTACAGTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 72 bp TTGGTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTaGGGCCTGCGGTTTGGGATGCTGTTTCTGCACTTG +
Preference number: 3 (lower is better)
Translates to: LVKLQLSGSCVW*GLRFGMLFLHL
Trigger: CAAGTGCAGAAACAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp CACTCTCTCACCCGAGGAAAGCCAGTCAGCTCAGTGTaGCATTCAAGTCTCTCTGTGAGTGATCCCTCACCT +
Preference number: 3 (lower is better)
Translates to: HSLTRGKPVSSV*HSSLSVSDPSP
Trigger: AGGTGAGGGATCACTCACAGAGAGACTTGAATGTCACACTGAGCTGACTGGCTTTCCTCGGGTGAGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp GTAAACTCCTTGGTGAAACTTCAGCTTTCTGGTTCCTaGGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTTT +
Preference number: 3 (lower is better)
Translates to: VNSLVKLQLSGS*VWWGLRFGMLF
Trigger: AAACAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCACCAAGGAGTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp TGGAAGTTAGGGACACCTCTGCACTACTCACTGACCTaGGGTTTATACTCCAATAGTGGACCCCTACCCGCT +
Preference number: 3 (lower is better)
Translates to: WKLGTPLHYSLT*GLYSNSGPLPA
Trigger: AGCGGGTAGGGGTCCACTATTGGAGTATAAACCTCAGGTCAGTGAGTAGTGCAGAGGTGTCCCTAACTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp GCTGCTCATCCATGGACTGTAGCCCCCAAGGGCAAGTaGCATGCTTCTATTCATTCCTGTCACTTAGCATTG +
Preference number: 3 (lower is better)
Translates to: AAHPWTVAPKGK*HASIHSCHLAL
Trigger: CAATGCTAAGTGACAGGAATGAATAGAAGCATGGCACTTGCCCTTGGGGGCTACAGTCCATGGATGAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp TCATCCATGGACTGTAGCCCCCAAGGGCAAGTGCCATaGTTCTATTCATTCCTGTCACTTAGCATTGGGTCT +
Preference number: 3 (lower is better)
Translates to: SSMDCSPQGQVP*FYSFLSLSIGS
Trigger: AGACCCAATGCTAAGTGACAGGAATGAATAGAAGCATGGCACTTGCCCTTGGGGGCTACAGTCCATGGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp TTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTaGTCATCCATGGACTGTAGCCCCCAAGGGCAAGTG +
Preference number: 3 (lower is better)
Translates to: FVVLSAFTRLQC*SSMDCSPQGQV
Trigger: CACTTGCCCTTGGGGGCTACAGTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp GCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTTTCTaGACTTGCTCACTGTTGAATTTCAAATACTCTTTC +
Preference number: 3 (lower is better)
Translates to: ACGGACGLGCCF*TCSLLNFKYSF
Trigger: GAAAGAGTATTTGAAATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGCCCCACCACACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp CATGGAATGAGGACTATAGCTGCTCTCTTAAAAACCTaGAGCCCCCTCTCTCAGCCCAGACAGTTGAGGTAT +
Preference number: 3 (lower is better)
Translates to: HGMRTIAALLKT*SPLSQPRQLRY
Trigger: ATACCTCAACTGTCTGGGCTGAGAGAGGGGGCTGCAGGTTTTTAAGAGAGCAGCTATAGTCCTCATTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 72 bp GGCTTCAACCAGCAAAGCAAAGGCCTAGGAAACATTTaGTACCATCAGCTCTGGTGGTTGCACCTAAGATGG +
Preference number: 3 (lower is better)
Translates to: GFNQQSKGLGNI*YHQLWWLHLRW
Trigger: CCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCCTAGGCCTTTGCTTTGCTGGTTGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 72 bp ATACTAAGTAAACTCCTTGGTGAAACTTCAGCTTTCTaGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGAT +
Preference number: 3 (lower is better)
Translates to: ILSKLLGETSAF*FLRVVGPAVWD
Trigger: ATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCACCAAGGAGTTTACTTAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGGCCCAGAGCCCCTGCTaGGGCTTCAACCAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKAQSPC*GFNQQS
Trigger: GCTTTGCTGGTTGAAGCCCAAGCAGGGGCTCTGGGC...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCATTTACATAGAGCTTaGATGGTGCTTCTTACCATA +
Preference number: 3 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMHLHRA*MVLLTI
Trigger: TATGGTAAGAAGCACCATCAAAGCTCTATGTAAATG...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTGGCTCCATGAAGACTTaGGATAGAAACATCTTCCTT +
Preference number: 3 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSGSMKT*DRNIFL
Trigger: AAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCC...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp AAGGCATATCAGTGCCATGAAATCATGCTCCACCTTTaGCCGCTTTCATCATATCACCAGGAGCTGCAGTCT +
Preference number: 3 (lower is better)
Translates to: KAYQCHEIMLHL*PLSSYHQELQS
Trigger: AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACTGATATGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTAGGCCTAGGAAACATTaGGTACCATCAGCTCTGGTG +
Preference number: 3 (lower is better)
Translates to: RHMPPHQALFPLLLKSWIRPRKH*VPSALV
Trigger: CACCAGAGCTGATGGTACCAAATGTTTCCTAGGCCT...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAAAATGTAGGTCTTCCTaGGACTCCCTTCAAGGGGCA +
Preference number: 3 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKKCRSS*DSLQGA
Trigger: TGCCCCTTGAAGGGAGTCCAAGGAAGACCTACATTT...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCAGGCAGGAGAATAGCTaGAACCCGGGAGGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSRQENS*NPGGEG
Trigger: ACCTTCACCTCCCGGGTTCAAGCTATTCTCCTGCCT...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTAGGAGAGAGATTTCTTaGAAGGAGTTTGTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSRREIS*KEFVFC
Trigger: ACAAAACACAAACTCCTTCAAAGAAATCTCTCTCCT...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp CCCTCAGTCTCTCAACTATCTGGGATCATAGGCACATaGCACCACACCAAGCTCTATTTCCTCTACTTCTTA +
Preference number: 3 (lower is better)
Translates to: PSVSQLSGIIGT*HHTKLYFLYFL
Trigger: TAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCTATGATCCCAGATAGTTGAGAGACTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCTCAGAAAGAACAGACTaGAGTGCTAGCGAATATGTT +
Preference number: 3 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKASERTD*SASEYV
Trigger: AACATATTCGCTAGCACTCAAGTCTGTTCTTTCTGA...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAACACCAGGCAGATTTGTaGAGTCCTATAGCCAATTCA +
Preference number: 3 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKHQADL*SPIANS
Trigger: TGAATTGGCTATAGGACTCAACAAATCTGCCTGGTG...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGTTACACCAGGCAGATTaGTTGAGTCCTATAGCCAAT +
Preference number: 3 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTLHQAD*LSPIAN
Trigger: ATTGGCTATAGGACTCAACAAATCTGCCTGGTGTAA...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp AGGCGACTGCCTAGCTGTTTCAGAATGATTTCAGAATaGTGCCTGCATTACTCAAGCAGGACAAGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: RRLPSCFRMISE*CLHYSSRTRRG
Trigger: TCCTCTTCTTGTCCTGCTTGAGTAATGCAGGCATCATTCTGAAATCATTCTGAAACAGCTAGGCAGTCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp ATTTCTAGGGTAAATCCTCGCCTTTGGGAGTGTGAATaGGACAAGCGTATCAGCAACTGCCAAGACCAATCA +
Preference number: 3 (lower is better)
Translates to: ISRVNPRLWECE*DKRISNCQDQS
Trigger: TGATTGGTCTTGGCAGTTGCTGATACGCTTGTCTCATTCACACTCCCAAAGGCGAGGATTTACCCTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp CCTACTTTTTCAAGGCATATCAGTGCCATGAAATCATaGTCCACCTTTGCCCGCTTTCATCATATCACCAGG +
Preference number: 3 (lower is better)
Translates to: PTFSRHISAMKS*STFARFHHITR
Trigger: CCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACTGATATGCCTTGAAAAAGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp ATCAGCCTGGAGACTTGTCAAGTTTGTTGTTTTATCTaGATTTACCAGGCTCCAGTGCTGCTCATCCATGGA +
Preference number: 3 (lower is better)
Translates to: ISLETCQVCCFI*IYQAPVLLIHG
Trigger: TCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTTGACAAGTCTCCAGGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp AGCCCCCTCTCTCAGCCCAGACAGTTGAGGTATTTATaGACCATCATAACATTAACAGCATCTTTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: SPLSQPRQLRYL*TIITLTASLLW
Trigger: CCAAAGCAAAGATGCTGTTAATGTTATGATGGTGCATAAATACCTCAACTGTCTGGGCTGAGAGAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACTCCTGTCACTTAGCATaGGGTCTATTCTCAACCAGT +
Preference number: 3 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDSCHLA*GLFSTS
Trigger: ACTGGTTGAGAATAGACCCAATGCTAAGTGACAGGA...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp TTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTaGTATAAGAGAGGCCATGACAGAGAGTTAATTTCT +
Preference number: 3 (lower is better)
Translates to: LPAFIISPGAAV*YKRGHDRELIS
Trigger: AGAAATTAACTCTCTGTCATGGCCTCTCTTATATCAGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp ATGGTGCTTCTTACCATATCACTGGGTCTGCCTGACTaGTTTATGGTGAATCTGAAACCATTGGGAAAATGG +
Preference number: 3 (lower is better)
Translates to: MVLLTISLGLPD*FMVNLKPLGKW
Trigger: CCATTTTCCCAATGGTTTCAGATTCACCATAAAGCAGTCAGGCAGACCCAGTGATATGGTAAGAAGCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp AATGGACTTTTACCTCCTTGCCATAATCCTAAAGCATaGCAAGATGGCATGAGCCTCAGCCTTTCAGAAAGA +
Preference number: 3 (lower is better)
Translates to: NGLLPPCHNPKA*QDGMSLSLSER
Trigger: TCTTTCTGAAAGGCTGAGGCTCATGCCATCTTGGCATGCTTTAGGATTATGGCAAGGAGGTAAAAGTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp TTAGCCAGAGGACCACAAACTAGTAGACCTTATTCATaGCGATCCTTTGCTTGGCATGCCTTTCTCTCATTT +
Preference number: 3 (lower is better)
Translates to: LARGPQTSRPYS*RSFAWHAFLSF
Trigger: AAATGAGAGAAAGGCATGCCAAGCAAAGGATCGGCATGAATAAGGTCTACTAGTTTGTGGTCCTCTGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCTGCCTTCACATACATTaGTACGTATCTCAGTGCAGC +
Preference number: 3 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSCLHIH*YVSQCS
Trigger: GCTGCACTGAGATACGTACAAATGTATGTGAAGGCA...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp TTTGATGGTGCTTCTTACCATATCACTGGGTCTGCCTaGCTGCTTTATGGTGAATCTGAAACCATTGGGAAA +
Preference number: 3 (lower is better)
Translates to: FDGASYHITGSA*LLYGESETIGK
Trigger: TTTCCCAATGGTTTCAGATTCACCATAAAGCAGTCAGGCAGACCCAGTGATATGGTAAGAAGCACCATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp ACAAACAACCTACTTTTTCAAGGCATATCAGTGCCATaGAATCATGCTCCACCTTTGCCCGCTTTCATCATA +
Preference number: 3 (lower is better)
Translates to: TNNLLFQGISVP*NHAPPLPAFII
Trigger: TATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACTGATATGCCTTGAAAAAGTAGGTTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAAATCATGCTCCACCTTaGCCCGCTTTCATCATATCA +
Preference number: 3 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKNHAPP*PAFIIS
Trigger: TGATATGATGAAAGCGGGCAAAGGTGGAGCATGATT...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAACCCACGTTAAGATTTaGCCATTTTGCACTCCTATT +
Preference number: 3 (lower is better)
Translates to: LCYFKPLPAWGKICSYHATHVKI*PFCTPI
Trigger: AATAGGAGTGCAAAATGGCAAAATCTTAACGTGGGT...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR TCA 72 bp AAAAGTTTTCACCTTCTAGCCCACAGGTTAAGTTACTaGAAATCAGTCATCACCATTTCTACCCACTTGTGT +
Preference number: 3 (lower is better)
Translates to: KSFHLLAHRLSY*KSVITISTHLC
Trigger: ACACAAGTGGGTAGAAATGGTGATGACTGATTTTCAGTAACTTAACCTGTGGGCTAGAAGGTGAAAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CCA 72 bp TTCTGCCAATGCCCTTCTGGCTTTTACCGCAAGATATaGTTATTTAATTTTCTTCTGGGCATTTACATAGAG +
Preference number: 3 (lower is better)
Translates to: FCQCPSGFYRKI*LFNFLLGIYIE
Trigger: CTCTATGTAAATGCCCAGAAGAAAATTAAATAACCATATCTTGCGGTAAAAGCCAGAAGGGCATTGGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR-3UTR CAA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTACACCAATCAAGTGGTaGCCTATCTCAAAAACTTTA +
Preference number: 3 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSTPIKW*PISKTL
Trigger: TAAAGTTTTTGAGATAGGCAACCACTTGATTGGTGT...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR GCA 72 bp ATTTTCCATTCCCATCCTATAGAAATTGCATTCATCTaGCACCAGGCTATTGTTACTTTAATACTTAAACCT +
Preference number: 3 (lower is better)
Translates to: IFHSHPIEIAFI*HQAIVTLILKP
Trigger: AGGTTTAAGTATTAAAGTAACAATAGCCTGGTGGCAGATGAATGCAATTTCTATAGGATGGGAATGGAAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGCAGGCAGCTCCCCACTaGACCCGCCGGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLQAAPH*TRRGSS
Trigger: GCTGGACCCCCGGCGGGTGCAGTGGGGAGCTGCCTG...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTCCGCCCCAGTCCTCCTaGCTCTCGCCCTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSPPQSS*LSPSVA
Trigger: CGCCACAGAGGGCGAGAGCCAGGAGGACTGGGGCGG...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGGGGACCCCAGCAAGCTaGCTGTCAGTCCTGCAACCG +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLGTPAS*LSVLQP
Trigger: CGGTTGCAGGACTGACAGTCAGCTTGCTGGGGTCCC...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTGGGCCGGTCCATTTTaGCTGGAAGGCCCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLWAGPF*LEGPAG
Trigger: TCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCA...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGCAGCTTTCTGGTTCCTaGGTGTGGTGGGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLQLSGS*VWWGLR
Trigger: CCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTG...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTGCTGCTCAGAGCACTaGCTCCGGCCGCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLCCSEH*LRPQCQ
Trigger: TTGGCACTGCGGCCGGAGCCAGTGCTCTGAGCAGCA...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTGCTGGCTGCCAAGGCTaGTGGCTGGCAGTCCGCACT +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSAGCQG*WLAVRT
Trigger: AGTGCGGACTGCCAGCCACCAGCCTTGGCAGCCAGC...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGGGCTCTCGCCCTCTGTaGCGTAGGAGAAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLGSRPL*RRRNPP
Trigger: AGGAGGGTTTCTCCTACGCCACAGAGGGCGAGAGCC...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGAGCCTTTGTCTTCAGTaGGCCCGCCCCAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMSLCLQ*ARPSPP
Trigger: AGGAGGACTGGGGCGGGCCCACTGAAGACAAAGGCT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGGAAACCCTCCTCCACTaGGAAGGGGTCATCCACGTC +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMETLLH*EGVIHV
Trigger: GACGTGGATGACCCCTTCTCAGTGGAGGAGGGTTTC...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGAGCTGGGATGGGAAGTaGTGGTGGCGGCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMSWDGK*WWRQRK
Trigger: CTTCCTTTGCCGCCACCACCACTTCCCATCCCAGCT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGTGTCGGGGTCGGGGCTaGAGGCGACGAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTCRGRG*RRRAGC
Trigger: GCAGCCAGCTCGTCGCCTCCAGCCCCGACCCCGACA...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGGTGAGTCAAACATGCTaGTCAGAGCACTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMVSQTC*SEHWLR
Trigger: CCGGAGCCAGTGCTCTGAGCAGCATGTTTGACTCAC...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGAGCGTAGAAGCATGTTaGTGCTCCTTGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMSVEAC*CSLQHP
Trigger: GGGGTGCTGCAAGGAGCAGCAACATGCTTCTACGCT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTGGAACCCCGACACGATaGAGGCCACCACTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSGTPTR*RPPLVS
Trigger: AGACACCAGTGGTGGCCTGCATCGTGTCGGGGTTCC...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTACCCCTGACCAGCCGTaGGGCAAGAACTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSTPDQP*GKNWPS
Trigger: GGAGGGCCAGTTCTTGCCCCACGGCTGGTCAGGGGT...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTGCTGACTGTCAGTCCTaGAACCGACCCAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSADCQS*NRPNGH
Trigger: GTGGCCATTGGGTCGGTTGCAGGACTGACAGTCAGC...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCGTGTGCCCCGTCGCTaGTGTGGGCCGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELRVPRR*CGPVHF
Trigger: AAAATGGACCGGCCCACAGCAGCGACGGGGCACACG...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTTCTGCCCAGAGCCCCTaGTTGGGCTTCAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSSAQSP*LGFNQQ
Trigger: TTGCTGGTTGAAGCCCAAGCAGGGGCTCTGGGCAGA...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCGGTTCCTGCGTGTGGTaGGGCCTGCGGTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAGSCVW*GLRFGM
Trigger: CATCCCAAACCGCAGGCCCCACCACACGCAGGAACC...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCTCTGGTTCCTGCGTGTaGTGGGGCCTGCGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKASGSCV*WGLRFG
Trigger: CCCAAACCGCAGGCCCCACCACACGCAGGAACCAGA...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCAAACCGGATCCATGTaGTGGTGGAGAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMQTGSM*WWRALA
Trigger: TGCTAAAGCTCTCCACCATCACATGGATCCGGTTTG...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGATTCAAGTCTCTCTGTaGGTGATCCCTCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMIQVSL*VIPHLP
Trigger: AGGCAGGTGAGGGATCACTCACAGAGAGACTTGAAT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGTTGAGCGATAGGGGATaGAGTGAAGGTCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLLSDRG*SEGQLM
Trigger: CATCAGCTGACCTTCACTGCATCCCCTATCGCTCAA...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGGCCAAGGCTGGTGGCTaGCAGTCCGCACTTACTGCG +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTAKAGG*QSALTA
Trigger: CGCAGTAAGTGCGGACTGCCAGCCACCAGCCTTGGC...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTCAGCTTCTATGCCTGTaGTCATGTCCACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSQLLCL*SCPRCR
Trigger: ACGGCACCGTGGACATGACCACAGGCATAGAAGCTG...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAGCAGGAGCACGCAGATaGTCACCGTGTGCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKAGARR*SPCAPS
Trigger: CGACGGGGCACACGGTGACCATCTGCGTGCTCCTGC...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTAGCAGACCCCCGCTCTaGCTTCAGACACATTTCCTG +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSSRPPL*LQTHFL
Trigger: CAGGAAATGTGTCTGAAGCCAGAGCGGGGGTCTGCT...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAACCGCCATCCAGCGGCTaGTGGTGTGGTTGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKPPSSG*WCGWLV
Trigger: CACTAGCCAACCACACCATCAGCCGCTGGATGGCGG...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGGCTATGACTAGGGATTaGATTTGGGGAAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMAMTRD*IWGRLD
Trigger: ATCCAGCCTTCCCCAAATTCAATCCCTAGTCATAGC...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGATTCATCAGCTTCTATaGCTGTGGTCATGTCCACGG +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLIHQLL*LWSCPR
Trigger: CCGTGGACATGACCACAGGCATAGAAGCTGATGAAT...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTTGGTACGTGCTTTGGTaGAGGGCCTCTTCTCGAGCG +
Preference number: 4 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSWYVLW*RASSRA
Trigger: CGCTCGAGAAGAGGCCCTGCACCAAAGCACGTACCA...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGGGCTTGTTAGTTCCTTaGATAGGTAAGGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLGLLVP*IGKEAT
Trigger: GGTGGCTTCCTTACCTATGCAAGGAACTAACAAGCC...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTCAGCGGCTGATGGTGTaGTTGGCTAGTGAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSQRLMV*LASESN
Trigger: GTTTGACTCACTAGCCAACCACACCATCAGCCGCTG...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTACGTGTTGGGATTCTTaGCTTCCTCTCCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSTCWDS*LPLQWW
Trigger: CCACCACTGGAGAGGAAGCCAAGAATCCCAACACGT...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGTCAAATACTCTTTCGTaGCCAGGCCACCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMSNTLS*PGHHWL
Trigger: TAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGA...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTCAGAAGGTCTGGGTATaGTTCTTCACCTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSQKVWV*FFTFPQ
Trigger: CTGGGGAAAGGTGAAGAATCATACCCAGACCTTCTG...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGGCAAATGACAGGCTATaGCTAGGGATTGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLANDRL*LGIEFG
Trigger: CCCAAATTCAATCCCTAGTCATAGCCTGTCATTTGC...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGGAGCAGCACTCAGCCTaGCATGCCAAGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELEQHSA*HAKNRA
Trigger: AGCTCTGTTCTTGGCATGTCAGGCTGAGTGCTGCTC...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCCCCATCTACCCACCCTaGCCTCGGGGAGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPPIYPP*PRGAAL
Trigger: GAGTGCTGCTCCCCGAGGTCAGGGTGGGTAGATGGG...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAACCGCGGACTTTCCTCTaGCATCTTGGGCCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKPRTFL*HLGPLV
Trigger: TACCAGGGGCCCAAGATGTCAGAGGAAAGTCCGCGG...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGGATCCTGGAGTGCATTaGATACCAGGCAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELDPGVH*IPGSSP
Trigger: TGGGGAGCTGCCTGGTATGCAATGCACTCCAGGATC...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGCCACATACATGCCAGTaGCCACACAGCTGCCAACGC +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTPHTCQ*PHSCQR
Trigger: GCGTTGGCAGCTGTGTGGGCACTGGCATGTATGTGG...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGCTGGGTCTGCCTGACTaGTTTATGGTGAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLLGLPD*FMVNLK
Trigger: TTTCAGATTCACCATAAAGCAGTCAGGCAGACCCAG...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGTGGACCCCTACCCGCTaGGTAGACTCCGTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTWTPTR*VDSVSR
Trigger: TCTGCTTACGGAGTCTACGCAGCGGGTAGGGGTCCA...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCGATGCAGGCCACCACTaGTGTCTCTGTGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKADAGHH*CLCVGA
Trigger: AGCTCCTACACAGAGACACCAGTGGTGGCCTGCATC...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGATGTCACTCTCAGGTTaGTATCGAAGGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMMSLSG*YRRSKT
Trigger: TGTCTTGCTCCTTCGATACCAACCTGAGAGTGACAT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGGAATTTGGGGAAGGCTaGATTTGTGAAATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMEFGEG*ICEMRA
Trigger: GGCTCTCATTTCACAAATCCAGCCTTCCCCAAATTC...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATATCCTTGCAGCACCCCTaGCCAGCCGTGGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFISLQHP*PAVGQE
Trigger: TTCTTGCCCCACGGCTGGTCAGGGGTGCTGCAAGGA...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGAAACGTTTGGCATACTaGTACATCCAGGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMKRLAY*YIQERK
Trigger: CTTTCTCTCCTGGATGTATCAGTATGCCAAACGTTT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCACTACTCACTGACCTaGGGTTTATACTCCAATAGT +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMHYSLT*GLYSNS
Trigger: ACTATTGGAGTATAAACCTCAGGTCAGTGAGTAGTG...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCCGTAGGATCCTGGAGTaGATTGCATACCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKARRILE*IAYQAA
Trigger: AGCTGCCTGGTATGCAATGCACTCCAGGATCCTACG...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATACAGTGCGAGGAGCGCTaGCAGGAACCCCGACACGAT +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIQCEER*QEPRHD
Trigger: ATCGTGTCGGGGTTCCTGGCAGCGCTCCTCGCACTG...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGTTGGGGTTCTCTGGCTaGTGCAGGATCACAAACACC +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELLGFSG*CRITNT
Trigger: GGTGTTTGTGATCCTGCAGCAGCCAGAGAACCCCAA...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGTATGTTAAAACCCAGTaGATCAGCCTGGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMYVKTQ*ISLETC
Trigger: ACAAGTCTCCAGGCTGATGCACTGGGTTTTAACATA...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCCCACCACTGGTTACCTaGTGGTGCCTCTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAPPLVT*WCLSLL
Trigger: TAAGAGAGAGAGGCACCAGCAGGTAACCAGTGGTGG...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTGTGATCTCGACTCACTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWIVISTH*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTGAGTCGAGATCAC...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCTTGCCCAGGCTGGAGTaGAATGGTGTGATCTCGACT +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKALPRLE*NGVIST
Trigger: AGTCGAGATCACACCATTGCACTCCAGCCTGGGCAA...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACCCGTGGGGCAAGAACTaGCCCTCCGCCCAGTATTTC +
Preference number: 4 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDPWGKN*PSAQYF
Trigger: GAAATACTGGGCGGAGGGCCAGTTCTTGCCCCACGG...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGCGTTGGTACGTGCTTTaGTGCAGGGCCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTRWYVL*CRASSR
Trigger: TCGAGAAGAGGCCCTGCACCAAAGCACGTACCAACG...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGGATGATGTGACTACATaGAATGAGGACTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLDDVTT*NEDYSC
Trigger: GCAGCTATAGTCCTCATTCCATGTAGTCACATCATC...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAGCAGTGAAGGTCAGCTaGTGGAAGGGGGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKAVKVS*WKGATK
Trigger: CTTTGTAGCCCCCTTCCATCAGCTGACCTTCACTGC...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTTGTCTGATTTCCCTATaGGCATCTCATTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSCLISL*ASHCLP
Trigger: TGGGAGACAATGAGATGCTCATAGGGAAATCAGACA...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCCAGTCAGCTCAGTGTaGCATTCAAGTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELPVSSV*HSSLSV
Trigger: CACAGAGAGACTTGAATGTCACACTGAGCTGACTGG...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCTCGCCTTTGGGAGTGTaGATGAGACAAGCGTATCAG +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKASPLGV*MRQAYQ
Trigger: CTGATACGCTTGTCTCATTCACACTCCCAAAGGCGA...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTAGGCGACGAGCTGGCTaGCAAGGCTGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSRRRAG*QGWWLA
Trigger: TGCCAGCCACCAGCCTTGGCAGCCAGCTCGTCGCCT...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCATGTTGCTGCTCCTTaGAGCACCCCTGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSHVAAP*STPDQP
Trigger: CGGCTGGTCAGGGGTGCTGCAAGGAGCAGCAACATG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTCAGATGGTCACCGTGTaGCCCGTCGCTGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSQMVTV*PVAAVG
Trigger: GCCCACAGCAGCGACGGGGCACACGGTGACCATCTG...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGGTTTGTGTTTGCTTTTaGTCTTCGCTTTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLVCVCF*SSLCYL
Trigger: CAAGTAGCAAAGCGAAGAGCAAAAGCAAACACAAAC...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTGCACTCAGCCTGACATaGCAAGAACAGAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSALSLT*QEQSFV
Trigger: GACAAAGCTCTGTTCTTGGCATGTCAGGCTGAGTGC...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTATCATGCTCCACCTTTaGCCGCTTTCATCATATCAC +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSIMLHL*PLSSYH
Trigger: GTGATATGATGAAAGCGGGCAAAGGTGGAGCATGAT...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGATCTCCAGAGGTCTTTaGAGACACGTGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTISRGL*RHVGPQ
Trigger: CTGAGGACCCACGTGTCTGCAAAGACCTCTGGAGAT...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGAAGCGTATCAGCAACTaGCAAGACCAATCAATAGAT +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMKRISN*QDQSID
Trigger: ATCTATTGATTGGTCTTGGCAGTTGCTGATACGCTT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGAATGAGGACTATAGCTaGTCTCTTAAAAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLNEDYS*SLKNLQ
Trigger: CTGCAGGTTTTTAAGAGAGCAGCTATAGTCCTCATT...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGCTGGAGGCGACGAGCTaGCTGCCAAGGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKLEATS*LPRLVA
Trigger: AGCCACCAGCCTTGGCAGCCAGCTCGTCGCCTCCAG...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAATTCCATGTGCCGTGGTaGTCCCAGTTCCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKFHVPW*SQFPLA
Trigger: TGCTAGAGGGAACTGGGACCACCACGGCACATGGAA...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGGCCCCGTCGCTGCTGTaGGCCGGTCCATTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRAPSLL*AGPFCL
Trigger: CAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGC...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 72 bp GGGCTTCAACCAGCAAAGCAAAGGCCTAGGAAACATTaGGTACCATCAGCTCTGGTGGTTGCACCTAAGATG +
Preference number: 4 (lower is better)
Translates to: GLQPAKQRPRKH*VPSALVVAPKM
Trigger: CATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCCTAGGCCTTTGCTTTGCTGGTTGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 72 bp TGGTGGGGCCTGCGGTTTGGGATGCTGTTTCTGCACTaGCTCACTGTTGAATTTCAAATACTCTTTCGTGGC +
Preference number: 4 (lower is better)
Translates to: WWGLRFGMLFLH*LTVEFQILFRG
Trigger: GCCACGAAAGAGTATTTGAAATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGCCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCGTAATTGGGGTGGTTaGCGTTGTAGGTTGACTTGT +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELRNWGG*RCRLTC
Trigger: ACAAGTCAACCTACAACGTCAACCACCCCAATTACG...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCATCACTGGGTCTGCCTaGCTGCTTTATGGTGAATCT +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAITGSA*LLYGES
Trigger: AGATTCACCATAAAGCAGTCAGGCAGACCCAGTGAT...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTCCAGGAGCTGCAGTCTaGTATAAGAGAGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWIPGAAV*YKRGHD
Trigger: GTCATGGCCTCTCTTATATCAGACTGCAGCTCCTGG...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAAAGTCTCTCTGTGAGTaGTCCCTCACCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKKSLCE*SLTCLP
Trigger: AGGAAGGCAGGTGAGGGATCACTCACAGAGAGACTT...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTACTCCACTGGTTTGGTaGGTAGGATCCTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWITPLVW*VGSWSA
Trigger: TGCACTCCAGGATCCTACGCACCAAACCAGTGGAGT...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTAATGACACCAGGTCCTaGCATTTCCTTGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWINDTRS*HFLGHQ
Trigger: CTGGTGGCCAAGGAAATGGCAGGACCTGGTGTCATT...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGCTAGTGAGTCAAACATaGTGCTCAGAGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTLVSQT*CSEHWL
Trigger: GAGCCAGTGCTCTGAGCAGCATGTTTGACTCACTAG...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATACAAGCTGACCAACAGTaGGAGGAGCGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIQADQQ*EERCQE
Trigger: TTCCTGGCAGCGCTCCTCGCACTGTTGGTCAGCTTG...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGAGTGCCATGAAATCATaGTCCACCTTTGCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELSAMKS*STFARF
Trigger: AAAGCGGGCAAAGGTGGAGCATGATTTCATGGCACT...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAGCCCCCAAGGGCAAGTaGCATGCTTCTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKAPKGK*HASIHS
Trigger: GGAATGAATAGAAGCATGGCACTTGCCCTTGGGGGC...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCTGGCCACTACGAATTTaGCAGCATAGAACCCATGAG +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAWPLRI*QHRTHE
Trigger: CTCATGGGTTCTATGCTGCCAAATTCGTAGTGGCCA...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACGAACAACCAGAAGGATaGCCCACCAGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDEQPEG*PTSSAL
Trigger: CAGAGCAGAGCTGGTGGGCCATCCTTCTGGTTGTTC...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCTGCCAATGCCCTTCTaGCTTTTACCGCAAGATATG +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELLPMPF*LLPQDM
Trigger: CATATCTTGCGGTAAAAGCCAGAAGGGCATTGGCAG...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCATGAAAATGGAGCGCTaGCACACAGCCCTCGTGGCG +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSMKMER*HTALVA
Trigger: CGCCACGAGGGCTGTGTGCCAGCGCTCCATTTTCAT...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAACCACTGGTTACCTGCTaGTGCCTCTCTCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKPLVTC*CLSLLG
Trigger: TCCTAAGAGAGAGAGGCACCAGCAGGTAACCAGTGG...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 72 bp TGCGGTTTGGGATGCTGTTTCTGCACTTGCTCACTGTaGAATTTCAAATACTCTTTCGTGGCCAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: CGLGCCFCTCSL*NFKYSFVARPP
Trigger: TGGTGGCCTGGCCACGAAAGAGTATTTGAAATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAAACCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATAGGCAGCCGCTGCTGCTaGACAGCTCCTCAATTATTC +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIGSRCC*TAPQLF
Trigger: GAATAATTGAGGAGCTGTTCAGCAGCAGCGGCTGCC...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGCGTGAGCCAGGAACCTaGAAAGGAGCCCGTCACCAG +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKREPGT*KGARHQ
Trigger: CTGGTGACGGGCTCCTTTTCAGGTTCCTGGCTCACG...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGATGGTCCAGAGTCCCTaGACTTTGCTGGATCCTAAA +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTMVQSP*TLLDPK
Trigger: TTTAGGATCCAGCAAAGTTCAGGGACTCTGGACCAT...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTAGTCTGCACTGCAGGTaGAATTCACATGACTCACAA +
Preference number: 4 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSSLHCR*NSHDSQ
Trigger: TTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACT...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGTATGGATGCGACGGCTaGAATGATGAAGGACACAAT +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELYGCDG*NDEGHN
Trigger: ATTGTGTCCTTCATCATTGCAGCCGTCGCATCCATA...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTTGGCTCCGGCCGCAGTaGCAATCAGGTACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSWLRPQ*QSGTPG
Trigger: TCCTGGAGTACCTGATTGGCACTGCGGCCGGAGCCA...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCCGTAGCGTTGGTACGTaGTTTGGTGCAGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPRSVGT*FGAGPL
Trigger: AAGAGGCCCTGCACCAAAGCACGTACCAACGCTACG...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCATAATCCTAAAGCATaGCAAGATGGCATGAGCCTC +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELHNPKA*QDGMSL
Trigger: GAGGCTCATGCCATCTTGGCATGCTTTAGGATTATG...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATATGTAGGGCAGCTTCTTaGGGTTCTCTGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFICRAAS*GSLAAA
Trigger: TGCAGCAGCCAGAGAACCCCAAGAAGCTGCCCTACA...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTGGCCTAGGAAACATTTaGTACCATCAGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWIGLGNI*YHQLWW
Trigger: CCACCAGAGCTGATGGTACCAAATGTTTCCTAGGCC...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGTGTGATCTCAGTGGCTaGCTCACTTCTCCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELCDLSG*LTSPCK
Trigger: TTTACAAGGAGAAGTGAGCCAGCCACTGAGATCACA...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGCCCAGTGCATCAGCCTaGAGACTTGTCAAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTPSASA*RLVKFV
Trigger: AACAAACTTGACAAGTCTCCAGGCTGATGCACTGGG...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGAGAAAATCAAGTAATTaGCTCCAAACCACAAATCCA +
Preference number: 4 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMRKSSN*LQTTNP
Trigger: TGGATTTGTGGTTTGGAGCCAATTACTTGATTTTCT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCGGCACACAGCCCTCGTaGCGACTTCTGGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPGTQPS*RLLDVF
Trigger: AAACACATCCAGAAGTCGCCACGAGGGCTGTGTGCC...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGTGGCCAGGCCACCACTaGTTACCTGCTGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRWPGHH*LPAGAS
Trigger: AGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCA...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCATCAGGTCTCTCAAGCTaGCCAACAGTGCGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHASGLSS*PTVRGA
Trigger: CGCTCCTCGCACTGTTGGTCAGCTTGAGAGACCTGA...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTCCTCTTCTCGAGCGCTaGTTTCCAGGGTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSPLLER*FPGCCS
Trigger: GGAACAGCACCCTGGAAATCAGCGCTCGAGAAGAGG...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACCATGTCTCAGGTGACTaGAATTCTGCCTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDHVSGD*NSAFCP
Trigger: TGGGCAGAAGGCAGAATTTCAGTCACCTGAGACATG...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCCAGAAAGAACAGACTTaGGTGCTAGCGAATATGTTC +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAQKEQT*VLANMF
Trigger: GAACATATTCGCTAGCACTCAAGTCTGTTCTTTCTG...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTTCATCAGGTATTTCTTaGATACACACTATATGCCAG +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSSSGIS*IHTICQ
Trigger: CTGGCATATAGTGTGTATTCAAGAAATACCTGATGA...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTACATTTCCTGAGTTCTaGCTTTTCCACACAATAAGA +
Preference number: 4 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSTFPEF*LFHTIR
Trigger: TCTTATTGTGTGGAAAAGTCAGAACTCAGGAAATGT...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAACTTTGGGAGTGTGAATaGGACAAGCGTATCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKLWECE*DKRISN
Trigger: GTTGCTGATACGCTTGTCTCATTCACACTCCCAAAG...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACGCTCACAGACACATATaGTGTCAGGCAGATGACCAG +
Preference number: 4 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDAHRHI*CQADDQ
Trigger: CTGGTCATCTGCCTGACAGCATATGTGTCTGTGAGC...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTGGACTTTTACCTCCTTaGCATAATCCTAAAGCATGC +
Preference number: 4 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSGLLPP*HNPKAC
Trigger: GCATGCTTTAGGATTATGGCAAGGAGGTAAAAGTCC...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATAGTGATCATAGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIVIIAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCTATGATCAC...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAATTCATGCCGATCCTTTaGTTGGCATGCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKFMPIL*LACLSL
Trigger: GAGAGAAAGGCATGCCAAGCAAAGGATCGGCATGAA...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAGGCTGCCAAGGCTGGTaGCTGGCAGTCCGCACTTAC +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKGCQGW*LAVRTY
Trigger: GTAAGTGCGGACTGCCAGCCACCAGCCTTGGCAGCC...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATATGTAGGCAGATCCTGTaGTCTTGGGGACTCGAACTC +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFICRQIL*SWGLEL
Trigger: GAGTTCGAGTCCCCAAGACCACAGGATCTGCCTACA...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCTGCAACCGACCCAATaGCCACTACGAATTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSLQPTQ*PLRIWQ
Trigger: CTGCCAAATTCGTAGTGGCCATTGGGTCGGTTGCAG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCCGGTCCATTTTGCCTaGAAGGCCCAGCCGGATTCT +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRPVHFA*KAQPDS
Trigger: AGAATCCGGCTGGGCCTTCCAGGCAAAATGGACCGG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCTTCTTACCATATCACTaGGTCTGCCTGACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAFLPYH*VCLTAL
Trigger: TAAAGCAGTCAGGCAGACCCAGTGATATGGTAAGAA...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCCTGCATTGTAAAATCTaGGACTGTTCACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKALHCKI*DCSQKQ
Trigger: CTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAG...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCAAAGTTCAGCCTTCCTaGATTCACACTTTCGTCAGT +
Preference number: 4 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAKVQPS*IHTFVS
Trigger: ACTGACGAAAGTGTGAATCCAGGAAGGCTGAACTTT...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAAGCCTCCCTAATAGCTaGGATTACAGGCATGCAACA +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKSLPNS*DYRHAT
Trigger: TGTTGCATGCCTGTAATCCCAGCTATTAGGGAGGCT...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCTCCCCATGTCTCAGGTaGCTGAAATTCTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSSPCLR*LKFCLL
Trigger: CAGAAGGCAGAATTTCAGTCACCTGAGACATGGGGA...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCACAGAGACCACATACATaGCAGTGCCCACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAQRPHT*QCPHSC
Trigger: GCAGCTGTGTGGGCACTGGCATGTATGTGGTCTCTG...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGGGGTTCTCTGGCTGCTaGAGGATCACAAACACCAGG +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKGFSGC*RITNTR
Trigger: CCTGGTGTTTGTGATCCTGCAGCAGCCAGAGAACCC...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCTCAGGAAGTGCCAATaGCCATCTACCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRLRKCQ*PSTHPD
Trigger: GTCAGGGTGGGTAGATGGGCATTGGCACTTCCTGAG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGTTGGGATGCTGTTTCTaGACTTGCTCACTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTLGCCF*TCSLLN
Trigger: ATTCAACAGTGAGCAAGTGCAGAAACAGCATCCCAA...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAGCGTGTGGTGGGGCCTaGGGTTTGGGATGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKACGGA*GLGCCF
Trigger: GAAACAGCATCCCAAACCGCAGGCCCCACCACACGC...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTTGGCCCCACATGTGTTaGTGGCTGGGCCAGAAAACT +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSWPHMC*WLGQKT
Trigger: AGTTTTCTGGCCCAGCCACCAACACATGTGGGGCCA...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAATACCATCAGCTCTGGTaGTTGCACCTAAGATGGAAT +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKYHQLW*LHLRWN
Trigger: ATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTA...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 72 bp GATGGCATGAGCCTCAGCCTTTCAGAAAGAACAGACTaGAGTGCTAGCGAATATGTTCTGGAAAACGTTTGG +
Preference number: 4 (lower is better)
Translates to: DGMSLSLSERTD*SASEYVLENVW
Trigger: CCAAACGTTTTCCAGAACATATTCGCTAGCACTCAAGTCTGTTCTTTCTGAAAGGCTGAGGCTCATGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATACAAATTCCCCAACAGTaGCATAGCTGTAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIQIPQQ*HSCRCR
Trigger: CCTACACCTACAGCTATGTCACTGTTGGGGAATTTG...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCACAAACACCAGGGTGCTaGTCAGCAGCACCATCAGAA +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAQTPGC*SAAPSE
Trigger: TTCTGATGGTGCTGCTGATCAGCACCCTGGTGTTTG...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTAGGTTGCTAGGGAGGTaGTTTATCAACTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSRLLGR*FINFRK
Trigger: TTTTCTAAAGTTGATAAATCACCTCCCTAGCAACCT...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCTCTGCACTACTCACTaGCCTGAGGTTTATACTCCA +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSLCTTH*PEVYTP
Trigger: TGGAGTATAAACCTCAGGTCAGTGAGTAGTGCAGAG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACGAAGCAGAGGCTCCATaGAGACTTTGGATAGAAACA +
Preference number: 4 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDEAEAP*RLWIET
Trigger: TGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTC...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCCTCAGCCCAGACAGTTaGGGTATTTATGCACCATCA +
Preference number: 4 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPLSPDS*GIYAPS
Trigger: TGATGGTGCATAAATACCTCAACTGTCTGGGCTGAG...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTTGTCATCAGATGATGTaGCTACATGGAATGAGGACT +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWICHQMM*LHGMRT
Trigger: AGTCCTCATTCCATGTAGTCACATCATCTGATGACA...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCTTTTGCTCTTCGCTTTaGTACTTGTCCGGCCGTTTG +
Preference number: 4 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPFCSSL*YLSGRL
Trigger: CAAACGGCCGGACAAGTAGCAAAGCGAAGAGCAAAA...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTCCCACGTTAAGATTTTaGCATTTTGCACTCCTATTT +
Preference number: 4 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSPTLRF*HFALLF
Trigger: AAATAGGAGTGCAAAATGGCAAAATCTTAACGTGGG...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGGAAATTGCATTCATCTaGCACCAGGCTATTGTTACT +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTEIAFI*HQAIVT
Trigger: AGTAACAATAGCCTGGTGGCAGATGAATGCAATTTC...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTGTGCTTAATAGAATCTaGATGAAGTCAACAGCAATG +
Preference number: 4 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSVLNRI*MKSTAM
Trigger: CATTGCTGTTGACTTCATGCAGATTCTATTAAGCAC...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGGCCTGCGGTTTGGGATaGTGTTTCTGCACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRACGLG*CFCTCS
Trigger: TGAGCAAGTGCAGAAACAGCATCCCAAACCGCAGGC...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTCTTAGTGGATGGTTCTaGAACTCATCTAGTGAACAG +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWILSGWF*NSSSEQ
Trigger: CTGTTCACTAGATGAGTTCCAGAACCATCCACTAAG...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGTGGTGCGTAGGATCCTaGAGTGCATTGCATACCAGG +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKWCVGS*SALHTR
Trigger: CCTGGTATGCAATGCACTCCAGGATCCTACGCACCA...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGTGGACTCCACTGGTTTaGTGCGTAGGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKWTPLV*CVGSWS
Trigger: ACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCA...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTCAGTTCCCTCTAGCATaGACTCCACTGGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSQFPLA*TPLVWC
Trigger: GCACCAAACCAGTGGAGTCCATGCTAGAGGGAACTG...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCACTGTGGTGAGTACCTaGGCTAGCTTAGTTCCATGT +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSTVVST*ASLVPC
Trigger: ACATGGAACTAAGCTAGCCCAGGTACTCACCACAGT...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAGGGATTCCGTGTCAATaGTATAATATGGCACCATCA +
Preference number: 4 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKGIPCQ*YNMAPS
Trigger: TGATGGTGCCATATTATACCATTGACACGGAATCCC...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGCACACACCAATCAAGTaGTTGCCTATCTCAAAAACT +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTHTPIK*LPISKT
Trigger: AGTTTTTGAGATAGGCAACCACTTGATTGGTGTGTG...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATAAATGTAGGTCTTCCTTaGACTCCCTTCAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFINVGLP*TPFKGQ
Trigger: TTGCCCCTTGAAGGGAGTCCAAGGAAGACCTACATT...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTGAAACTTCAGCTTTCTaGTTCCTGCGTGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSETSAF*FLRVVG
Trigger: CCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTC...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGATCAATAGATGTGCATaGAACATTCTCTTCATCCCC +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTINRCA*NILFIP
Trigger: GGGGATGAAGAGAATGTTCCATGCACATCTATTGAT...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
3UTR CAA 72 bp TTAAAAACCTGCAGCCCCCTCTCTCAGCCCAGACAGTaGAGGTATTTATGCACCATCATAACATTAACAGCA +
Preference number: 4 (lower is better)
Translates to: LKTCSPLSQPRQ*RYLCTIITLTA
Trigger: TGCTGTTAATGTTATGATGGTGCATAAATACCTCAACTGTCTGGGCTGAGAGAGGGGGCTGCAGGTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCCACAAACATCTCCATaGGTGGGGATTCCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRPQTSP*VGIPCQ
Trigger: TTGACACGGAATCCCCACTCATGGAGATGTTTGTGG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCCACCAGCTCTGCTCTaGGATGTAGTCAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRPPALL*DVVRTK
Trigger: TTTGGTTCTGACTACATCTCAGAGCAGAGCTGGTGG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTCATGCCAAGATGGCATaGGCCTCAGCCTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSHAKMA*ASAFQK
Trigger: TTTCTGAAAGGCTGAGGCTCATGCCATCTTGGCATG...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACTTGTACGTATCTCAGTaGAGCCACAGGAATTCTTGT +
Preference number: 4 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDLYVSQ*SHRNSC
Trigger: ACAAGAATTCCTGTGGCTGCACTGAGATACGTACAA...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATACAAGGGCAAGTGCCATaGTTCTATTCATTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIQGQVP*FYSFLS
Trigger: TGACAGGAATGAATAGAAGCATGGCACTTGCCCTTG...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGTTTACCAGGCTCCAGTaGTGCTCATCCATGGACTGT +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKFTRLQ*CSSMDC
Trigger: ACAGTCCATGGATGAGCAGCACTGGAGCCTGGTAAA...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTGTTTGTTGTTTTATCTaGATTTACCAGGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWIVCCFI*IYQAPV
Trigger: CACTGGAGCCTGGTAAATGCAGATAAAACAACAAAC...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AGGCACATGCCACCACACCAAGCTCTATTTCCTCTACTTCTTAAGAGCTGGATTTTTCAGAATGATGCCTaGATTACTCAAGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: RHMPPHQALFPLLLKSWIFQNDA*ITQAGQ
Trigger: TTGTCCTGCTTGAGTAATGCAGGCATCATTCTGAAA...AATCCAGCTCTTAAGAAGTAGAGGAAATAGAGCTTGGTGTGGTGGCATGTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCATAAAAATCCAGGCTaGCCCTGTTTCCTAGCTCTA +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSHKNPG*PCFLAL
Trigger: TAGAGCTAGGAAACAGGGGCAGCCTGGATTTTTATG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAGCTCTCTTAAAAACCTaGAGCCCCCTCTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKALLKT*SPLSQP
Trigger: GGGCTGAGAGAGGGGGCTGCAGGTTTTTAAGAGAGC...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCAAACATCTCCATGAGTaGGGATTCCGTGTCAATGGT +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSKHLHE*GFRVNG
Trigger: ACCATTGACACGGAATCCCCACTCATGGAGATGTTT...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAAGGATGGTAAGTTCTTaGCCCCACATGTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHARMVSS*PHMCWW
Trigger: CCACCAACACATGTGGGGCCAAGAACTTACCATCCT...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTCTTCTTGGGGTTCTCTaGCTGCTGCAGGATCACAAA +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSLLGVL*LLQDHK
Trigger: TTTGTGATCCTGCAGCAGCCAGAGAACCCCAAGAAG...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCATGGTACCATCAGCTCTaGTGGTTGCACCTAAGATGG +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAWYHQL*WLHLRW
Trigger: CCATCTTAGGTGCAACCACCAGAGCTGATGGTACCA...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGTTTGGAGTGTATATGTaGCTTGTTAGTTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTFGVYM*LVSSLH
Trigger: ATGCAAGGAACTAACAAGCCACATATACACTCCAAA...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCCTCAGACAAGAACTTaGCAAAACCATCAATGTCAC +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSPQTRT*QNHQCH
Trigger: GTGACATTGATGGTTTTGTCAAGTTCTTGTCTGAGG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATACATATCCAAAATAAATaGGCAGACCCACAAAGCACC +
Preference number: 4 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIHIQNK*ADPQST
Trigger: GGTGCTTTGTGGGTCTGCTCATTTATTTTGGATATG...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCAGCAAAAGTAGCAAATaGCAGGCTATGACTAGGGAT +
Preference number: 4 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPSKSSK*QAMTRD
Trigger: ATCCCTAGTCATAGCCTGTCATTTGCTACTTTTGCT...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAAGAGAATTTGCAATGTaGTCTCAGTGGCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAREFAM*SQWLAH
Trigger: GTGAGCCAGCCACTGAGATCACATTGCAAATTCTCT...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCATTGTTCCAAACAGCATaGAAATGGAGCGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHALFQTA*KWSAGT
Trigger: TGTGCCAGCGCTCCATTTTCATGCTGTTTGGAACAA...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCAACCATTATGTACATaGAAGGGGCTTTTTGCTACC +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSQPLCT*KGLFAT
Trigger: GGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTGATGAAGAAGAGGCCTaGGATCATGATGAACACCCA +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSDEEEA*DHDEHP
Trigger: TGGGTGTTCATCATGATCGCAGGCCTCTTCTTCATC...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCTTCAAGGCATATCAGTaGCATGAAATCATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPFKAYQ*HEIMLH
Trigger: GTGGAGCATGATTTCATGGCACTGATATGCCTTGAA...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAACATGTGTTGGTGGCTaGGCCAGAAAACTCATCCCC +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKTCVGG*ARKLIP
Trigger: GGGGATGAGTTTTCTGGCCCAGCCACCAACACATGT...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAACCCCACATGTGTTGGTaGCTGGGCCAGAAAACTCAT +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKPHMCW*LGQKTH
Trigger: ATGAGTTTTCTGGCCCAGCCACCAACACATGTGGGG...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCACCAGCCGGATTCTCATaGTGTAATAATGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAPAGFS*CNNEAQ
Trigger: TTGGGCCTCATTATTACACCATGAGAATCCGGCTGG...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTTCAGGTTCCAGCCAATaGAAAATGCCACAAATTCCC +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSSGSSQ*KMPQIP
Trigger: GGGAATTTGTGGCATTTTTCATTGGCTGGAACCTGA...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGGATTGCAGGATAAAATaGTGCTTGCTCAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKDCRIK*CLLRKC
Trigger: GCACTTCCTGAGCAAGCATCATTTTATCCTGCAATC...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAGTCCGTCATCTCACCTaGCACATTCACTATTGTTCT +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAVRHLT*HIHYCS
Trigger: AGAACAATAGTGAATGTGTCAGGTGAGATGACGGAC...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACTGTGGATTTTCAACCTaGTGTAGCTTCTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDCGFST*CSFCLC
Trigger: ACATAAACAGAAGCTACATCAGGTTGAAAATCCACA...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGTCCTTCTTCTTGGTGTaGTCCTCAGACAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRSFFLV*SSDKNL
Trigger: CAAGTTCTTGTCTGAGGAGCACACCAAGAAGAAGGA...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAACACAGTCAGCCAGAATaGCCTCCTTCTTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKHSQPE*PPSSWC
Trigger: ACACCAAGAAGAAGGAGGGCATTCTGGCTGACTGTG...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAGTTAATTTCTGCCAATaGCCTTCTGGCTTTTACCGC +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAVNFCQ*PSGFYR
Trigger: GCGGTAAAAGCCAGAAGGGCATTGGCAGAAATTAAC...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAGGGATCATAGGCACATaGCACCACACCAAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKGIIGT*HHTKLY
Trigger: ATAGAGCTTGGTGTGGTGGCATGTGCCTATGATCCC...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCATCCTTTGCTTGGCATaGCTTTCTCTCATTTCTACT +
Preference number: 4 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPILCLA*LSLIST
Trigger: AGTAGAAATGAGAGAAAGGCATGCCAAGCAAAGGAT...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCTAGCGAATATGTTCTaGAAAACGTTTGGCATACTG +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSLANMF*KTFGIL
Trigger: CAGTATGCCAAACGTTTTCCAGAACATATTCGCTAG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAACCTCGTGGCGACTTCTaGATGTGTTTCCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKPRGDF*MCFLCS
Trigger: AGAGCAAAGGAAACACATCCAGAAGTCGCCACGAGG...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTGTTTGCCTTCGCATCTaGCATCTGTTGGTAATAGAA +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSVCLRI*HLLVIE
Trigger: TTCTATTACCAACAGATGTCAGATGCGAAGGCAAAC...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAGGCATATCAGTGCCATaGAATCATGCTCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKGISVP*NHAPPL
Trigger: CAAAGGTGGAGCATGATTTCATGGCACTGATATGCC...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCTTCAGAAGTGAAATGTaGTCTCATGGAATGCAACTA +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSFRSEM*SHGMQL
Trigger: TAGTTGCATTCCATGAGATCACATTTCACTTCTGAA...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCGGAGAGAGATTTCTTTaGAGGAGTTTGTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSGERFL*RSLCFV
Trigger: AACAAAACACAAACTCCTTCAAAGAAATCTCTCTCC...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGGCCCAAAGCTATCTGTaGAAGTCCTATAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRAQSYL*KSYRDF
Trigger: AAAATCCCTATAGGACTTTCACAGATAGCTTTGGGC...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGCCAGCCAATGAAAAATaGCACAAATTCCCCAACAGT +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKPANEK*HKFPNS
Trigger: ACTGTTGGGGAATTTGTGGCATTTTTCATTGGCTGG...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAGATGAACACCCATACTaGCAGGTTCAGCACATTGAG +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKDEHPY*QVQHIE
Trigger: CTCAATGTGCTGAACCTGGCAGTATGGGTGTTCATC...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTCAGAGAGTTAATTTCTaGCAATGCCCTTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSQRVNF*QCPSGF
Trigger: AAAGCCAGAAGGGCATTGGCAGAAATTAACTCTCTG...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACCACTCGGAGAGCTTTTaGTATTCAGAATTCAATAAA +
Preference number: 4 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDHSESF*YSEFNK
Trigger: TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTG...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCAAAGCCTTAGTGGATaGTTCTGGAACTCATCTAGT +
Preference number: 4 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRQSLSG*FWNSSS
Trigger: ACTAGATGAGTTCCAGAACCATCCACTAAGGCTTTG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTGTTCTGGAAAACGTTTaGCATACTGATACATCCAGG +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSVLENV*HTDTSR
Trigger: CCTGGATGTATCAGTATGCCAAACGTTTTCCAGAAC...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGGCACTTGCTCACTGTTaGATTTCAAATACTCTTTCG +
Preference number: 4 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKALAHC*ISNTLS
Trigger: CGAAAGAGTATTTGAAATTCAACAGTGAGCAAGTGC...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR TCA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTAGAATGATTTCAGAATaGTGCCTGCATTACTCAAGC +
Preference number: 4 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSRMISE*CLHYSS
Trigger: GCTTGAGTAATGCAGGCATCATTCTGAAATCATTCT...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CCA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCGTGAACTCATTTATCTaGCTTTTCTACAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSVNSFI*LFYKGQ
Trigger: TTGTCCTTTGTAGAAAAGCCAGATAAATGAGTTCAC...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCATGCATGTATAAGTCATaGATAAATCATGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCYFKPLPAWGKICSYHACMYKS*INHVLQ
Trigger: CTGGAGCACATGATTTATGCATGACTTATACATGCA...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR GCA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAATTTCAAACCTCTACCTaGATGGGGAAAGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKFQTST*MGKDLF
Trigger: GAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAA...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp CCTGGGCATGAATGTCGGGGTCGGGGCTGGAGGCGACGAGCTGGCTaGCAAGGCTGGTGGCTGGCAGTCCGCACTTACTGCGCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PGHECRGRGWRRRAG*QGWWLAVRTYCAEL
Trigger: CAGCTCCGCGCAGTAAGTGCGGACTGCCAGCCACCAGCCTTGGCAGCCAGCTCGTCGCCTCCAGCCCCGACCCCGACATTCATGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp AGAGTGAGACCCTGTCGGGGTCGGGGCTGGAGGCGACGAGCTGGCTaGCAAGGCTGGTGGCTGGCAGTCCGCACTTACTGCGCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RVRPCRGRGWRRRAG*QGWWLAVRTYCAEL
Trigger: CAGCTCCGCGCAGTAAGTGCGGACTGCCAGCCACCAGCCTTGGCAGCCAGCTCGTCGCCTCCAGCCCCGACCCCGACAGGGTCTCACTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466168.1
CDS CCA 90 bp GGGGTCGGGGCTGGAGGCGACGAGCTGGCTGCCAAGGCTGGTGGCTaGCAGTCCGCACTTACTGCGCGGAGCTGTCTCTCTAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: GVGAGGDELAAKAGG*QSALTARSCLSSWD
Trigger: ATCCCAGCTAGAGAGACAGCTCCGCGCAGTAAGTGCGGACTGCCAGCCACCAGCCTTGGCAGCCAGCTCGTCGCCTCCAGCCCCGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231706.6
ENST00000466168.1
CDS CCA 90 bp AGAGCAGGAGCACGCAGATGGTCACCGTGTGCCCCGTCGCTGCTGTaGGCCGGTCCATTTTGCCTGGAAGGCCCAGCCGGATTCTCATGG +
Preference number: 5 (lower is better)
Translates to: RAGARRWSPCAPSLL*AGPFCLEGPAGFSW
Trigger: CCATGAGAATCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCACACGGTGACCATCTGCGTGCTCCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp CCCTCTAGCATGGACTCCACTGGTTTGGTGCGTAGGATCCTGGAGTaGATTGCATACCAGGCAGCTCCCCACTGCACCCGCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PSSMDSTGLVRRILE*IAYQAAPHCTRRGS
Trigger: GGACCCCCGGCGGGTGCAGTGGGGAGCTGCCTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp GATGAAGAGCAGGAGCACGCAGATGGTCACCGTGTGCCCCGTCGCTaGTGTGGGCCGGTCCATTTTGCCTGGAAGGCCCAGCCGGATTCT +
Preference number: 5 (lower is better)
Translates to: DEEQEHADGHRVPRR*CGPVHFAWKAQPDS
Trigger: AGAATCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCACACGGTGACCATCTGCGTGCTCCTGCTCTTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 90 bp TGTCTTCAGTGGGCCCGCCCCAGTCCTCCTGGCTCTCGCCCTCTGTaGCGTAGGAGAAACCCTCCTCCACTGAGAAGGGGTCATCCACGT +
Preference number: 5 (lower is better)
Translates to: CLQWARPSPPGSRPL*RRRNPPPLRRGHPR
Trigger: ACGTGGATGACCCCTTCTCAGTGGAGGAGGGTTTCTCCTACGCCACAGAGGGCGAGAGCCAGGAGGACTGGGGCGGGCCCACTGAAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp GTGCGTAGGATCCTGGAGTGCATTGCATACCAGGCAGCTCCCCACTaGACCCGCCGGGGGTCCAGCGAGGTGAAGAAGCCACTCATCTTG +
Preference number: 5 (lower is better)
Translates to: VRRILECIAYQAAPH*TRRGSSEVKKPLIL
Trigger: CAAGATGAGTGGCTTCTTCACCTCGCTGGACCCCCGGCGGGTGCAGTGGGGAGCTGCCTGGTATGCAATGCACTCCAGGATCCTACGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 90 bp GTTGCTGCTCCTTGCAGCACCCCTGACCAGCCGTGGGGCAAGAACTaGCCCTCCGCCCAGTATTTCCCATTGATGAAGAAGAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: VAAPCSTPDQPWGKN*PSAQYFPLMKKRPA
Trigger: CGCAGGCCTCTTCTTCATCAATGGGAAATACTGGGCGGAGGGCCAGTTCTTGCCCCACGGCTGGTCAGGGGTGCTGCAAGGAGCAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 90 bp TGCGAGGAGCGCTGCCAGGAACCCCGACACGATGCAGGCCACCACTaGTGTCTCTGTGTAGGAGCTGACGTGAGCCAGGAACCTGAAAAG +
Preference number: 5 (lower is better)
Translates to: CEERCQEPRHDAGHH*CLCVGADVSQEPEK
Trigger: CTTTTCAGGTTCCTGGCTCACGTCAGCTCCTACACAGAGACACCAGTGGTGGCCTGCATCGTGTCGGGGTTCCTGGCAGCGCTCCTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 90 bp CTCCTGGCTCTCGCCCTCTGTGGCGTAGGAGAAACCCTCCTCCACTaGGAAGGGGTCATCCACGTCGTAGCGTTGGTACGTGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LLALALCGVGETLLH*EGVIHVVALVRALV
Trigger: CACCAAAGCACGTACCAACGCTACGACGTGGATGACCCCTTCTCAGTGGAGGAGGGTTTCTCCTACGCCACAGAGGGCGAGAGCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp AGATGGTCACCGTGTGCCCCGTCGCTGCTGTGGGCCGGTCCATTTTaGCTGGAAGGCCCAGCCGGATTCTCATGGTGTAATAATGAGGCC +
Preference number: 5 (lower is better)
Translates to: RWSPCAPSLLWAGPF*LEGPAGFSWCNNEA
Trigger: GGCCTCATTATTACACCATGAGAATCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCACACGGTGACCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 90 bp GTGCCGTGGTGGTCCCAGTTCCCTCTAGCATGGACTCCACTGGTTTaGTGCGTAGGATCCTGGAGTGCATTGCATACCAGGCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: VPWWSQFPLAWTPLV*CVGSWSALHTRQLP
Trigger: GGGGAGCTGCCTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAGAGGGAACTGGGACCACCACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 90 bp GGTCACCGTGTGCCCCGTCGCTGCTGTGGGCCGGTCCATTTTGCCTaGAAGGCCCAGCCGGATTCTCATGGTGTAATAATGAGGCCCAAT +
Preference number: 5 (lower is better)
Translates to: GHRVPRRCCGPVHFA*KAQPDSHGVIMRPN
Trigger: ATTGGGCCTCATTATTACACCATGAGAATCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCACACGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGGGTCCTGCCATTTCCTaGGCCACCAGGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMGPAIS*ATRPET
Trigger: GGTCTCTGGCCTGGTGGCCAAGGAAATGGCAGGACC...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp CCGTGGTGGTCCCAGTTCCCTCTAGCATGGACTCCACTGGTTTGGTaGGTAGGATCCTGGAGTGCATTGCATACCAGGCAGCTCCCCACT +
Preference number: 5 (lower is better)
Translates to: PWWSQFPLAWTPLVW*VGSWSALHTRQLPT
Trigger: AGTGGGGAGCTGCCTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAGAGGGAACTGGGACCACCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp CCTCGGCATCGGGAAGAGGGACCCCAGCAAGCTGACTGTCAGTCCTaGAACCGACCCAATGGCCACTACGAATTTGGCAGCATAGAACCC +
Preference number: 5 (lower is better)
Translates to: PRHREEGPQQADCQS*NRPNGHYEFGSIEP
Trigger: GGGTTCTATGCTGCCAAATTCGTAGTGGCCATTGGGTCGGTTGCAGGACTGACAGTCAGCTTGCTGGGGTCCCTCTTCCCGATGCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp CATCTCTATCAGGTCTCTCAAGCTGACCAACAGTGCGAGGAGCGCTaGCAGGAACCCCGACACGATGCAGGCCACCACTGGTGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: HLYQVSQADQQCEER*QEPRHDAGHHWCLC
Trigger: ACAGAGACACCAGTGGTGGCCTGCATCGTGTCGGGGTTCCTGGCAGCGCTCCTCGCACTGTTGGTCAGCTTGAGAGACCTGATAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp GCCGATAGACATCATCTCTATCAGGTCTCTCAAGCTGACCAACAGTaGGAGGAGCGCTGCCAGGAACCCCGACACGATGCAGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: ADRHHLYQVSQADQQ*EERCQEPRHDAGHH
Trigger: GTGGTGGCCTGCATCGTGTCGGGGTTCCTGGCAGCGCTCCTCGCACTGTTGGTCAGCTTGAGAGACCTGATAGAGATGATGTCTATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 90 bp CCTTCGCATCTGACATCTGTTGGTAATAGAAGCCTTTGTCTTCAGTaGGCCCGCCCCAGTCCTCCTGGCTCTCGCCCTCTGTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: PSHLTSVGNRSLCLQ*ARPSPPGSRPLWRR
Trigger: CCTACGCCACAGAGGGCGAGAGCCAGGAGGACTGGGGCGGGCCCACTGAAGACAAAGGCTTCTATTACCAACAGATGTCAGATGCGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 90 bp CAGCTGCCAACGCCAAGAGAGATGAGGTCCACTGTGGTGAGTACCTaGGCTAGCTTAGTTCCATGTGCCGTGGTGGTCCCAGTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: QLPTPREMRSTVVST*ASLVPCAVVVPVPS
Trigger: AGAGGGAACTGGGACCACCACGGCACATGGAACTAAGCTAGCCCAGGTACTCACCACAGTGGACCTCATCTCTCTTGGCGTTGGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGGCAGATCCTGTGGTCTaGGGGACTCGAACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMADPVV*GTRTPN
Trigger: GTTTGGAGTTCGAGTCCCCAAGACCACAGGATCTGC...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGTCTTCGCTTTGCTACTaGTCCGGCCGTTTGCCTTCG +
Preference number: 5 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMSSLCY*SGRLPS
Trigger: CGAAGGCAAACGGCCGGACAAGTAGCAAAGCGAAGA...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp GGGTCCAGCGAGGTGAAGAAGCCACTCATCTTGAGCGATAGGGGATaGAGTGAAGGTCAGCTGATGGAAGGGGGCTACAAAGCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: GSSEVKKPLILSDRG*SEGQLMEGGYKALV
Trigger: CACTAAGGCTTTGTAGCCCCCTTCCATCAGCTGACCTTCACTGCATCCCCTATCGCTCAAGATGAGTGGCTTCTTCACCTCGCTGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp GGATGCGACGGCTGCAATGATGAAGGACACAATGACACCAGGTCCTaGCATTTCCTTGGCCACCAGGCCAGAGACCACATACATGCCAGT +
Preference number: 5 (lower is better)
Translates to: GCDGCNDEGHNDTRS*HFLGHQARDHIHAS
Trigger: ACTGGCATGTATGTGGTCTCTGGCCTGGTGGCCAAGGAAATGGCAGGACCTGGTGTCATTGTGTCCTTCATCATTGCAGCCGTCGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGCGGCTGATGGTGTGGTaGGCTAGTGAGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLRLMVW*ASESNM
Trigger: CATGTTTGACTCACTAGCCAACCACACCATCAGCCG...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGATGCCCTCCTTCTTCTaGGTGTGCTCCTCAGACAAG +
Preference number: 5 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLMPSFF*VCSSDK
Trigger: CTTGTCTGAGGAGCACACCAAGAAGAAGGAGGGCAT...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGGGATCCTGGAGTGCATaGCATACCAGGCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTGSWSA*HTRQLP
Trigger: GGGGAGCTGCCTGGTATGCAATGCACTCCAGGATCC...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTGCCCAGTATTTCCCATaGATGAAGAAGAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSAQYFP*MKKRPA
Trigger: CGCAGGCCTCTTCTTCATCAATGGGAAATACTGGGC...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGTTGGCCCCACATGTGTaGGTGGCTGGGCCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELLAPHV*VAGPEN
Trigger: GTTTTCTGGCCCAGCCACCAACACATGTGGGGCCAA...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGCTGCCTATGAGCATCTCATaGTCTCCCAAGGATGGTAAG +
Preference number: 5 (lower is better)
Translates to: KLQLSGSCVWWGLRFGMLPMSIS*SPKDGK
Trigger: CTTACCATCCTTGGGAGACAATGAGATGCTCATAGG...CAGCATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 90 bp TTTGCTCTTCGCTTTGCTACTTGTCCGGCCGTTTGCCTTCGCATCTaGCATCTGTTGGTAATAGAAGCCTTTGTCTTCAGTGGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: FALRFATCPAVCLRI*HLLVIEAFVFSGPA
Trigger: GGCGGGCCCACTGAAGACAAAGGCTTCTATTACCAACAGATGTCAGATGCGAAGGCAAACGGCCGGACAAGTAGCAAAGCGAAGAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp GAACTGGCCCTCCGCCCAGTATTTCCCATTGATGAAGAAGAGGCCTaGGATCATGATGAACACCCATACTGCCAGGTTCAGCACATTGAG +
Preference number: 5 (lower is better)
Translates to: ELALRPVFPIDEEEA*DHDEHPYCQVQHIE
Trigger: CTCAATGTGCTGAACCTGGCAGTATGGGTGTTCATCATGATCGCAGGCCTCTTCTTCATCAATGGGAAATACTGGGCGGAGGGCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAAGCGTTGGTACGTGCTTaGGTGCAGGGCCTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKALVRA*VQGLFS
Trigger: CGAGAAGAGGCCCTGCACCAAAGCACGTACCAACGC...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGAGGCAGGAGAATAGCTaGAACCCGGGAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELRQENS*NPGGEG
Trigger: ACCTTCACCTCCCGGGTTCAAGCTATTCTCCTGCCT...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGGTGGGCCGGTCCATTTaGCCTGGAAGGCCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRVGRSI*PGRPSR
Trigger: CCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCAC...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGGATCTCCAGAGGTCTTaGCAGACACGTGGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTDLQRS*QTRGSS
Trigger: TGAGGACCCACGTGTCTGCAAAGACCTCTGGAGATC...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGTGTTTGTGTTTGCTTTaGCTCTTCGCTTTGCTACTT +
Preference number: 5 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMCLCLL*LFALLL
Trigger: AAGTAGCAAAGCGAAGAGCAAAAGCAAACACAAACA...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TGCCATGAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGAAATGTAGGTCTTCCTaGGACTCCCTTCAAGGGGCA +
Preference number: 5 (lower is better)
Translates to: CHEIMLHLCPLSSYHQELKCRSS*DSLQGA
Trigger: TGCCCCTTGAAGGGAGTCCAAGGAAGACCTACATTT...CAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCGGTGGGGCCTGCGGTTaGGGATGCTGTTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPGGACG*GCCFCT
Trigger: AGTGCAGAAACAGCATCCCAAACCGCAGGCCCCACC...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 90 bp CAGCACCATCAGAACAACCAGAAGGATGGCCCACCAGCTCTGCTCTaGGATGTAGTCAGAACCAAAGATGATGAAGGAGCAGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: QHHQNNQKDGPPALL*DVVRTKDDEGAEDE
Trigger: TTCATCTTCTGCTCCTTCATCATCTTTGGTTCTGACTACATCTCAGAGCAGAGCTGGTGGGCCATCCTTCTGGTTGTTCTGATGGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCCTTTCCCCAGGCCATaGAGGGTTCCCACGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRPFPRP*RVPTLS
Trigger: GGACAGCGTGGGAACCCTCAATGGCCTGGGGAAAGG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGAAGGATGGTAAGTTCTaGGCCCCACATGTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTKDGKF*APHVLV
Trigger: CACCAACACATGTGGGGCCAAGAACTTACCATCCTT...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTGCCCAGAGCCCCTGCTaGGGCTTCAACCAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSAQSPC*GFNQQS
Trigger: GCTTTGCTGGTTGAAGCCCAAGCAGGGGCTCTGGGC...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGACACCAATCAAGTGGTaGCCTATCTCAAAAACTTTA +
Preference number: 5 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMTPIKW*PISKTL
Trigger: TAAAGTTTTTGAGATAGGCAACCACTTGATTGGTGT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCACTTCCACTCACCCCTaGTGGGTTCTAAGTCCTAAA +
Preference number: 5 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKATSTHP*WVLSPK
Trigger: TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGT...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GTGAAACTTCAGCTTTCTGGTTCCTGCGTGTGGTGGGGCCTGCGGTTTGGGATGATCTGTAAATGCAAGTaGTACTTCTCAAGGACGAAA +
Preference number: 5 (lower is better)
Translates to: VKLQLSGSCVWWGLRFGMICKCK*YFSRTK
Trigger: TTTCGTCCTTGAGAAGTACAACTTGCATTTACAGAT...CATCCCAAACCGCAGGCCCCACCACACGCAGGAACCAGAAAGCTGAAGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 90 bp CCAGAATGCCCTCCTTCTTCTTGGTGTGCTCCTCAGACAAGAACTTaGCAAAACCATCAATGTCACTCTCAGGTTGGTATCGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: PECPPSSWCAPQTRT*QNHQCHSQVGIEGA
Trigger: TGCTCCTTCGATACCAACCTGAGAGTGACATTGATGGTTTTGTCAAGTTCTTGTCTGAGGAGCACACCAAGAAGAAGGAGGGCATTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp GCTTCCTTCTCACAGTCAGCCAGAATGCCCTCCTTCTTCTTGGTGTaGTCCTCAGACAAGAACTTGACAAAACCATCAATGTCACTCTCA +
Preference number: 5 (lower is better)
Translates to: ASFSQSARMPSFFLV*SSDKNLTKPSMSLS
Trigger: TGAGAGTGACATTGATGGTTTTGTCAAGTTCTTGTCTGAGGAGCACACCAAGAAGAAGGAGGGCATTCTGGCTGACTGTGAGAAGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp CTAACTCATCATTTGCAATCAGGGCCTCTGAGTTCTGTTTGTGTTTaGTTTTGCTCTTCGCTTTGCTACTTGTCCGGCCGTTTGCCTTCG +
Preference number: 5 (lower is better)
Translates to: LTHHLQSGPLSSVCV*FCSSLCYLSGRLPS
Trigger: CGAAGGCAAACGGCCGGACAAGTAGCAAAGCGAAGAGCAAAAGCAAACACAAACAGAACTCAGAGGCCCTGATTGCAAATGATGAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATAATGGACTCCACTGGTTaGGTGCGTAGGATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIMDSTG*VRRILE
Trigger: CTCCAGGATCCTACGCACCAAACCAGTGGAGTCCAT...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCAAGCGTAGAAGCATGTaGCTGCTCCTTGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSKRRSM*LLLAAP
Trigger: GGGTGCTGCAAGGAGCAGCAACATGCTTCTACGCTT...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTTCAGAAAGAACAGACTaGAGTGCTAGCGAATATGTT +
Preference number: 5 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSSERTD*SASEYV
Trigger: AACATATTCGCTAGCACTCAAGTCTGTTCTTTCTGA...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TTCAAATACTCTTTCGTGGCCAGGCCACCACTGGTTACCTGCTGGTGCCTCTCTACCCACGTTAAGATTTaGCCATTTTGCACTCCTATT +
Preference number: 5 (lower is better)
Translates to: FKYSFVARPPLVTCWCLSTHVKI*PFCTPI
Trigger: AATAGGAGTGCAAAATGGCAAAATCTTAACGTGGGT...AGAGAGGCACCAGCAGGTAACCAGTGGTGGCCTGGCCACGAAAGAGTATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 90 bp CTACGAATTTGGCAGCATAGAACCCATGAGCCACAAACATCTCCATaGGTGGGGATTCCGTGTCAATGGTATAATATGGCACCATCAGAG +
Preference number: 5 (lower is better)
Translates to: LRIWQHRTHEPQTSP*VGIPCQWYNMAPSE
Trigger: CTCTGATGGTGCCATATTATACCATTGACACGGAATCCCCACTCATGGAGATGTTTGTGGCTCATGGGTTCTATGCTGCCAAATTCGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCTACTTGTCCGGCCGTTaGCCTTCGCATCTGACATCT +
Preference number: 5 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPYLSGR*PSHLTS
Trigger: AGATGTCAGATGCGAAGGCAAACGGCCGGACAAGTA...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GAAATCATGCTCCACCTTTGCCCGCTTTCATCATATCACCAGGAGCTGCAGTCTGAGTTCTGTTTGTGTTaGCTTTTGCTCTTCGCTTTG +
Preference number: 5 (lower is better)
Translates to: EIMLHLCPLSSYHQELQSEFCLC*LLLFAL
Trigger: CAAAGCGAAGAGCAAAAGCAAACACAAACAGAACTC...AGACTGCAGCTCCTGGTGATATGATGAAAGCGGGCAAAGGTGGAGCATGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AGGGGAAGCAGAGGCTCCATGAAGACTTTGGATAGAAACATCTTCCTTGACACGCACCAGGCAGATTTGTaGAGTCCTATAGCCAATTCA +
Preference number: 5 (lower is better)
Translates to: RGSRGSMKTLDRNIFLDTHQADL*SPIANS
Trigger: TGAATTGGCTATAGGACTCAACAAATCTGCCTGGTG...CGTGTCAAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCCTCTGCTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CCTTTGATGGGCTACAAAACTTCCACTCACCCCTTGTGGGTTCTAAGTCCTAAATCTCAGCCCAGACAGTaGAGGTATTTATGCACCATC +
Preference number: 5 (lower is better)
Translates to: PLMGYKTSTHPLWVLSPKSQPRQ*RYLCTI
Trigger: GATGGTGCATAAATACCTCAACTGTCTGGGCTGAGA...TTTAGGACTTAGAACCCACAAGGGGTGAGTGGAAGTTTTGTAGCCCATCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 90 bp CCCATTGATGAAGAAGAGGCCTGCGATCATGATGAACACCCATACTaGCAGGTTCAGCACATTGAGAACATTGTTGAAGCCTATGGAATT +
Preference number: 5 (lower is better)
Translates to: PIDEEEACDHDEHPY*QVQHIENIVEAYGI
Trigger: AATTCCATAGGCTTCAACAATGTTCTCAATGTGCTGAACCTGGCAGTATGGGTGTTCATCATGATCGCAGGCCTCTTCTTCATCAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGGACGTGTTGGGATTCTaGGCTTCCTCTCCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKDVLGF*ASSPVV
Trigger: CACCACTGGAGAGGAAGCCAAGAATCCCAACACGTC...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCTCCTCAGACAAGAACTaGACAAAACCATCAATGTCA +
Preference number: 5 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKASSDKN*TKPSMS
Trigger: TGACATTGATGGTTTTGTCAAGTTCTTGTCTGAGGA...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGATCCACGTCGTAGCGTaGGTACGTGCTTTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRIHVVA*VRALVQ
Trigger: CTGCACCAAAGCACGTACCAACGCTACGACGTGGAT...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TCACACTTTCGTCAGTTCCCCAATTATTTCCCACTCTCTCACCCGAGGAAAGCCATGCTGTTTCTGCACTaGCTCACTGTTGAATTTCAA +
Preference number: 5 (lower is better)
Translates to: SHFRQFPNYFPLSHPRKAMLFLH*LTVEFQ
Trigger: TTGAAATTCAACAGTGAGCAAGTGCAGAAACAGCAT...GGCTTTCCTCGGGTGAGAGAGTGGGAAATAATTGGGGAACTGACGAAAGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCACTTTTGCTCTTCGCTTaGCTACTTGTCCGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: LCYFKPLPAWGKICSYHALLLFA*LLVRPF
Trigger: AAACGGCCGGACAAGTAGCAAAGCGAAGAGCAAAAG...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAATGCCGATCCTTTGCTaGGCATGCCTTTCTCTCATT +
Preference number: 5 (lower is better)
Translates to: LCYFKPLPAWGKICSYHAMPILC*ACLSLI
Trigger: AATGAGAGAAAGGCATGCCAAGCAAAGGATCGGCAT...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGATTCATGCCGATCCTTaGCTTGGCATGCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRIHADP*LGMPFS
Trigger: AGAGAAAGGCATGCCAAGCAAAGGATCGGCATGAAT...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp GGAAACATTTGGTACCATCAGCTCTGGTGGTTGCACCTAAGATGGAATTTCATAGAGTGTATATGTGGCTaGTTAGTTCCTTGCATAGGT +
Preference number: 5 (lower is better)
Translates to: GNIWYHQLWWLHLRWNFIECICG*LVPCIG
Trigger: ACCTATGCAAGGAACTAACAAGCCACATATACACTC...TATGAAATTCCATCTTAGGTGCAACCACCAGAGCTGATGGTACCAAATGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AAAGTAGGACATAGGACCAACCATTATGTACATGAAAGGGGCTTTTTGCTACCCGGCTCCATGAAGACTTaGGATAGAAACATCTTCCTT +
Preference number: 5 (lower is better)
Translates to: KVGHRTNHYVHERGFLLPGSMKT*DRNIFL
Trigger: AAGGAAGATGTTTCTATCCAAAGTCTTCATGGAGCC...GGGTAGCAAAAAGCCCCTTTCATGTACATAATGGTTGGTCCTATGTCCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCTTAGAGAAGTAATTTaGGCAAAAGGCGACTGCCTA +
Preference number: 5 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSLREVI*AKGDCL
Trigger: TAGGCAGTCGCCTTTTGCCAAAATTACTTCTCTAAG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AAGTTTGTTGTTTTATCTGCATTTACCAGGCTCCAGTGCTGCTCATCCATGGACAACACATATTCACCTTaGATGGGCTACAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: KFVVLSAFTRLQCCSSMDNTYSP*MGYKTS
Trigger: GGAAGTTTTGTAGCCCATCAAAGGTGAATATGTGTT...GTCCATGGATGAGCAGCACTGGAGCCTGGTAAATGCAGATAAAACAACAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCACATTAACAGCATCTTaGCTTTGGAAAGTGGGGGTT +
Preference number: 5 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSTLTAS*LWKVGV
Trigger: AACCCCCACTTTCCAAAGCAAAGATGCTGTTAATGT...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAAAGAAGCCACTCATCTaGAGCGATAGGGGATGCAGT +
Preference number: 5 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKKKPLI*SDRGCS
Trigger: ACTGCATCCCCTATCGCTCAAGATGAGTGGCTTCTT...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTACCATTTCTACCCACTaGTGTGTTTCTCCTACTCTG +
Preference number: 5 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSTISTH*CVSPTL
Trigger: CAGAGTAGGAGAAACACACAAGTGGGTAGAAATGGT...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAAGGCCTAGGAAACATTaGGTACCATCAGCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKRPRKH*VPSALV
Trigger: CACCAGAGCTGATGGTACCAAATGTTTCCTAGGCCT...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCCTGAAGAAGGATGGATaGTTAAATTCAACAACTCCC +
Preference number: 5 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSLKKDG*LNSTTP
Trigger: GGGAGTTGTTGAATTTAACAATCCATCCTTCTTCAG...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAAATCTAACTCATCATTaGCAATCAGGGCCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: LCYFKPLPAWGKICSYHANLTHH*QSGPLS
Trigger: ACTCAGAGGCCCTGATTGCAAATGATGAGTTAGATT...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ACACAGTCCTTTAAAGTCTGCACTGCAGGTGAAATTCACATGACTCACAATTCCAATATGAAAGAGAATTaGCAATGTGATCTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: TQSFKVCTAGEIHMTHNSNMKEN*QCDLSG
Trigger: GCCACTGAGATCACATTGCAAATTCTCTTTCATATT...GGAATTGTGAGTCATGTGAATTTCACCTGCAGTGCAGACTTTAAAGGACTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTTTACACCAGGCAGATTaGTTGAGTCCTATAGCCAAT +
Preference number: 5 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSLHQAD*LSPIAN
Trigger: ATTGGCTATAGGACTCAACAAATCTGCCTGGTGTAA...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAATCCTGTCACTTAGCATaGGGTCTATTCTCAACCAGT +
Preference number: 5 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKSCHLA*GLFSTS
Trigger: ACTGGTTGAGAATAGACCCAATGCTAAGTGACAGGA...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGCATCAGCCTGGAGACTaGTCAAGTTTGTTGTTTTAT +
Preference number: 5 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKHQPGD*SSLLFY
Trigger: ATAAAACAACAAACTTGACAAGTCTCCAGGCTGATG...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp AATGCTGTATTTCACAGAGTAGGCACTGTATCTTTATGGTTAACTCTAGGGAAGATAGAAACATCTTCCTaGACACGTCTTGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: NAVFHRVGTVSLWLTLGKIETSS*TRLVPN
Trigger: GTTTGGAACAAGACGTGTCAAGGAAGATGTTTCTAT...CTTCCCTAGAGTTAACCATAAAGATACAGTGCCTACTCTGTGAAATACAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp TTGATGGTATTTGAAAACTGCATTGTAAAATCTGGGACTGTTCACAGAAGCAGGCATTTACATAGAGCTTaGATGGTGCTTCTTACCATA +
Preference number: 5 (lower is better)
Translates to: LMVFENCIVKSGTVHRSRHLHRA*MVLLTI
Trigger: TATGGTAAGAAGCACCATCAAAGCTCTATGTAAATG...CCTGCTTCTGTGAACAGTCCCAGATTTTACAATGCAGTTTTCAAATACCATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CATGGAATGCAACTACCTAAGTCGCTATACTTCAGCCTATTTTGTTTTCAGAGTTCATGGTGTCACTCATaGGCAAATTTAGTAAAGCAT +
Preference number: 5 (lower is better)
Translates to: HGMQLPKSLYFSLFCFQSSWCHS*ANLVKH
Trigger: ATGCTTTACTAAATTTGCCAATGAGTGACACCATGA...ACTCTGAAAACAAAATAGGCTGAAGTATAGCGACTTAGGTAGTTGCATTCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp CTATGCTATTTCAAACCTCTACCTGCATGGGGAAAGATTTGTTCTTATCATGCAAGGAGAGAGATTTCTTaGAAGGAGTTTGTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: LCYFKPLPAWGKICSYHARREIS*KEFVFC
Trigger: ACAAAACACAAACTCCTTCAAAGAAATCTCTCTCCT...TGCATGATAAGAACAAATCTTTCCCCATGCAGGTAGAGGTTTGAAATAGCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS-3UTR CAA 90 bp ATCCACACAATGAAATCTCACTCGGAGAGCTTTTGCTATTCAGAATTCAATAAAAAAGTGGCTGTTAAATaGTGTTGCTTGTCCACGTAT +
Preference number: 5 (lower is better)
Translates to: IHTMKSHSESFCYSEFNKKVAVK*CCLSTY
Trigger: ATACGTGGACAAGCAACACAATTTAACAGCCACTTT...TTTATTGAATTCTGAATAGCAAAAGCTCTCCGAGTGAGATTTCATTGTGTGGAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp GGTCGGGGCTGGAGGCGACGAGCTGGCTGCCAAGGCTaGTGGCTGGCAGTCCGCACTTACTGCGCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GRGWRRRAGCQG*WLAVRTYCAEL
Trigger: CAGCTCCGCGCAGTAAGTGCGGACTGCCAGCCACCAGCCTTGGCAGCCAGCTCGTCGCCTCCAGCCCCGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231706.6
ENST00000466168.1
CDS CCA 72 bp CGGGGCTGGAGGCGACGAGCTGGCTGCCAAGGCTGGTaGCTGGCAGTCCGCACTTACTGCGCGGAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: RGWRRRAGCQGW*LAVRTYCAELS
Trigger: AGACAGCTCCGCGCAGTAAGTGCGGACTGCCAGCCACCAGCCTTGGCAGCCAGCTCGTCGCCTCCAGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231706.6
ENST00000466168.1
CDS GCA 72 bp GAATGTCGGGGTCGGGGCTGGAGGCGACGAGCTGGCTaGCAAGGCTGGTGGCTGGCAGTCCGCACTTACTGC +
Preference number: 6 (lower is better)
Translates to: ECRGRGWRRRAG*QGWWLAVRTYC
Trigger: GCAGTAAGTGCGGACTGCCAGCCACCAGCCTTGGCAGCCAGCTCGTCGCCTCCAGCCCCGACCCCGACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp GCACGCAGATGGTCACCGTGTGCCCCGTCGCTGCTGTaGGCCGGTCCATTTTGCCTGGAAGGCCCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: ARRWSPCAPSLL*AGPFCLEGPAG
Trigger: TCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCACACGGTGACCATCTGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp CAGGAGCACGCAGATGGTCACCGTGTGCCCCGTCGCTaGTGTGGGCCGGTCCATTTTGCCTGGAAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: QEHADGHRVPRR*CGPVHFAWKAQ
Trigger: CTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCACACGGTGACCATCTGCGTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp GCTGGAGGCGACGAGCTGGCTGCCAAGGCTGGTGGCTaGCAGTCCGCACTTACTGCGCGGAGCTGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: AGGDELAAKAGG*QSALTARSCLS
Trigger: AGAGAGACAGCTCCGCGCAGTAAGTGCGGACTGCCAGCCACCAGCCTTGGCAGCCAGCTCGTCGCCTCCAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231706.6
ENST00000466168.1
CDS CCA 72 bp TGGGCCCGCCCCAGTCCTCCTGGCTCTCGCCCTCTGTaGCGTAGGAGAAACCCTCCTCCACTGAGAAGGGGT +
Preference number: 6 (lower is better)
Translates to: WARPSPPGSRPL*RRRNPPPLRRG
Trigger: ACCCCTTCTCAGTGGAGGAGGGTTTCTCCTACGCCACAGAGGGCGAGAGCCAGGAGGACTGGGGCGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp ATCCTGGAGTGCATTGCATACCAGGCAGCTCCCCACTaGACCCGCCGGGGGTCCAGCGAGGTGAAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: ILECIAYQAAPH*TRRGSSEVKKP
Trigger: TGGCTTCTTCACCTCGCTGGACCCCCGGCGGGTGCAGTGGGGAGCTGCCTGGTATGCAATGCACTCCAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp CAGGTCTCTCAAGCTGACCAACAGTGCGAGGAGCGCTaGCAGGAACCCCGACACGATGCAGGCCACCACTGG +
Preference number: 6 (lower is better)
Translates to: QVSQADQQCEER*QEPRHDAGHHW
Trigger: CCAGTGGTGGCCTGCATCGTGTCGGGGTTCCTGGCAGCGCTCCTCGCACTGTTGGTCAGCTTGAGAGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp CTAGCATGGACTCCACTGGTTTGGTGCGTAGGATCCTGGAGTGCATaGCATACCAGGCAGCTCCCCACTGCACCCGCCGGGGGTCCAGCG +
Preference number: 6 (lower is better)
Translates to: LAWTPLVWCVGSWSA*HTRQLPTAPAGGPA
Trigger: CGCTGGACCCCCGGCGGGTGCAGTGGGGAGCTGCCTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp CCGTGTGCCCCGTCGCTGCTGTGGGCCGGTCCATTTTaGCTGGAAGGCCCAGCCGGATTCTCATGGTGTAAT +
Preference number: 6 (lower is better)
Translates to: PCAPSLLWAGPF*LEGPAGFSWCN
Trigger: ATTACACCATGAGAATCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp AGGATGAAGAGCAGGAGCACGCAGATGGTCACCGTGTaGCCCGTCGCTGCTGTGGGCCGGTCCATTTTGCCT +
Preference number: 6 (lower is better)
Translates to: RMKSRSTQMVTV*PVAAVGRSILP
Trigger: AGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCACACGGTGACCATCTGCGTGCTCCTGCTCTTCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp CATGTTGCTGCTCCTTGCAGCACCCCTGACCAGCCGTaGGGCAAGAACTGGCCCTCCGCCCAGTATTTCCCA +
Preference number: 6 (lower is better)
Translates to: HVAAPCSTPDQP*GKNWPSAQYFP
Trigger: TGGGAAATACTGGGCGGAGGGCCAGTTCTTGCCCCACGGCTGGTCAGGGGTGCTGCAAGGAGCAGCAACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp CGCTGCCAGGAACCCCGACACGATGCAGGCCACCACTaGTGTCTCTGTGTAGGAGCTGACGTGAGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: RCQEPRHDAGHH*CLCVGADVSQE
Trigger: TTCCTGGCTCACGTCAGCTCCTACACAGAGACACCAGTGGTGGCCTGCATCGTGTCGGGGTTCCTGGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp TTGAGGGTTCCCACGCTGTCCGCCATCCAGCGGCTGATGGTGTGGTaGGCTAGTGAGTCAAACATGCTGCTCAGAGCACTGGCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: LRVPTLSAIQRLMVW*ASESNMLLRALAPA
Trigger: GGCCGGAGCCAGTGCTCTGAGCAGCATGTTTGACTCACTAGCCAACCACACCATCAGCCGCTGGATGGCGGACAGCGTGGGAACCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 72 bp CTCGCCCTCTGTGGCGTAGGAGAAACCCTCCTCCACTaGGAAGGGGTCATCCACGTCGTAGCGTTGGTACGT +
Preference number: 6 (lower is better)
Translates to: LALCGVGETLLH*EGVIHVVALVR
Trigger: ACGTACCAACGCTACGACGTGGATGACCCCTTCTCAGTGGAGGAGGGTTTCTCCTACGCCACAGAGGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp ATGGACTCCACTGGTTTGGTGCGTAGGATCCTGGAGTaGATTGCATACCAGGCAGCTCCCCACTGCACCCGC +
Preference number: 6 (lower is better)
Translates to: MDSTGLVRRILE*IAYQAAPHCTR
Trigger: GCGGGTGCAGTGGGGAGCTGCCTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp GTGCCCCGTCGCTGCTGTGGGCCGGTCCATTTTGCCTaGAAGGCCCAGCCGGATTCTCATGGTGTAATAATG +
Preference number: 6 (lower is better)
Translates to: VPRRCCGPVHFA*KAQPDSHGVIM
Trigger: CATTATTACACCATGAGAATCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCGACGGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 72 bp CGCCGGGGGTCCAGCGAGGTGAAGAAGCCACTCATCTaGAGCGATAGGGGATGCAGTGAAGGTCAGCTGATG +
Preference number: 6 (lower is better)
Translates to: RRGSSEVKKPLI*SDRGCSEGQLM
Trigger: CATCAGCTGACCTTCACTGCATCCCCTATCGCTCAAGATGAGTGGCTTCTTCACCTCGCTGGACCCCCGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp TGTGCCGTGGTGGTCCCAGTTCCCTCTAGCATGGACTCCACTGGTTaGGTGCGTAGGATCCTGGAGTGCATTGCATACCAGGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: CAVVVPVPSSMDSTG*VRRILECIAYQAAP
Trigger: GGGAGCTGCCTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAGAGGGAACTGGGACCACCACGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp GGTTGGCTAGTGAGTCAAACATGCTGCTCAGAGCACTaGCTCCGGCCGCAGTGCCAATCAGGTACTCCAGGA +
Preference number: 6 (lower is better)
Translates to: GWLVSQTCCSEH*LRPQCQSGTPG
Trigger: TCCTGGAGTACCTGATTGGCACTGCGGCCGGAGCCAGTGCTCTGAGCAGCATGTTTGACTCACTAGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp CAAAGGGGAGGCAAGGGGCCATGTAGGGCAGCTTCTTaGGGTTCTCTGGCTGCTGCAGGATCACAAACACCA +
Preference number: 6 (lower is better)
Translates to: QRGGKGPCRAAS*GSLAAAGSQTP
Trigger: TGGTGTTTGTGATCCTGCAGCAGCCAGAGAACCCCAAGAAGCTGCCCTACATGGCCCCTTGCCTCCCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 72 bp GAAGGGGTCATCCACGTCGTAGCGTTGGTACGTGCTTaGGTGCAGGGCCTCTTCTCGAGCGCTGATTTCCAG +
Preference number: 6 (lower is better)
Translates to: EGVIHVVALVRA*VQGLFSSADFQ
Trigger: CTGGAAATCAGCGCTCGAGAAGAGGCCCTGCACCAAAGCACGTACCAACGCTACGACGTGGATGACCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp GACCAGCCGTGGGGCAAGAACTGGCCCTCCGCCCAGTATTTCCCATaGATGAAGAAGAGGCCTGCGATCATGATGAACACCCATACTGCC +
Preference number: 6 (lower is better)
Translates to: DQPWGKNWPSAQYFP*MKKRPAIMMNTHTA
Trigger: GGCAGTATGGGTGTTCATCATGATCGCAGGCCTCTTCTTCATCAATGGGAAATACTGGGCGGAGGGCCAGTTCTTGCCCCACGGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp CATCATCTCTATCAGGTCTCTCAAGCTGACCAACAGTaGGAGGAGCGCTGCCAGGAACCCCGACACGATGCA +
Preference number: 6 (lower is better)
Translates to: HHLYQVSQADQQ*EERCQEPRHDA
Trigger: TGCATCGTGTCGGGGTTCCTGGCAGCGCTCCTCGCACTGTTGGTCAGCTTGAGAGACCTGATAGAGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp ACGCCAAGAGAGATGAGGTCCACTGTGGTGAGTACCTaGGCTAGCTTAGTTCCATGTGCCGTGGTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: TPREMRSTVVST*ASLVPCAVVVP
Trigger: TGGGACCACCACGGCACATGGAACTAAGCTAGCCCAGGTACTCACCACAGTGGACCTCATCTCTCTTGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp GCTGCAATGATGAAGGACACAATGACACCAGGTCCTGCCATTTCCTaGGCCACCAGGCCAGAGACCACATACATGCCAGTGCCCACACAG +
Preference number: 6 (lower is better)
Translates to: AAMMKDTMTPGPAIS*ATRPETTYMPVPTQ
Trigger: CTGTGTGGGCACTGGCATGTATGTGGTCTCTGGCCTGGTGGCCAAGGAAATGGCAGGACCTGGTGTCATTGTGTCCTTCATCATTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 72 bp GGTACGTGCTTTGGTGCAGGGCCTCTTCTCGAGCGCTaGTTTCCAGGGTGCTGTTCCAGATGCCATATCCAA +
Preference number: 6 (lower is better)
Translates to: GTCFGAGPLLER*FPGCCSRCHIQ
Trigger: TTGGATATGGCATCTGGAACAGCACCCTGGAAATCAGCGCTCGAGAAGAGGCCCTGCACCAAAGCACGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp TCCCAGTTCCCTCTAGCATGGACTCCACTGGTTTGGTaGGTAGGATCCTGGAGTGCATTGCATACCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SQFPLAWTPLVW*VGSWSALHTRQ
Trigger: CTGCCTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAGAGGGAACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp TGGTCCCAGTTCCCTCTAGCATGGACTCCACTGGTTTaGTGCGTAGGATCCTGGAGTGCATTGCATACCAGG +
Preference number: 6 (lower is better)
Translates to: WSQFPLAWTPLV*CVGSWSALHTR
Trigger: CCTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAGAGGGAACTGGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 72 bp GTGGTCCCAGTTCCCTCTAGCATGGACTCCACTGGTTaGGTGCGTAGGATCCTGGAGTGCATTGCATACCAG +
Preference number: 6 (lower is better)
Translates to: VVPVPSSMDSTG*VRRILECIAYQ
Trigger: CTGGTATGCAATGCACTCCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAGAGGGAACTGGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 72 bp GATGACCGCGATCAACAGAGCCAGAAGGTCTGGGTATaGTTCTTCACCTTTCCCCAGGCCATTGAGGGTTCC +
Preference number: 6 (lower is better)
Translates to: DDRDQQSQKVWV*FFTFPQAIEGS
Trigger: GGAACCCTCAATGGCCTGGGGAAAGGTGAAGAATCATACCCAGACCTTCTGGCTCTGTTGATCGCGGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp GGCTGCAATGATGAAGGACACAATGACACCAGGTCCTaGCATTTCCTTGGCCACCAGGCCAGAGACCACATA +
Preference number: 6 (lower is better)
Translates to: GCNDEGHNDTRS*HFLGHQARDHI
Trigger: TATGTGGTCTCTGGCCTGGTGGCCAAGGAAATGGCAGGACCTGGTGTCATTGTGTCCTTCATCATTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 72 bp TGGGGCAAGAACTGGCCCTCCGCCCAGTATTTCCCATaGATGAAGAAGAGGCCTGCGATCATGATGAACACC +
Preference number: 6 (lower is better)
Translates to: WGKNWPSAQYFP*MKKRPAIMMNT
Trigger: GGTGTTCATCATGATCGCAGGCCTCTTCTTCATCAATGGGAAATACTGGGCGGAGGGCCAGTTCTTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp GAGGTGAAGAAGCCACTCATCTTGAGCGATAGGGGATaGAGTGAAGGTCAGCTGATGGAAGGGGGCTACAAA +
Preference number: 6 (lower is better)
Translates to: EVKKPLILSDRG*SEGQLMEGGYK
Trigger: TTTGTAGCCCCCTTCCATCAGCTGACCTTCACTGCATCCCCTATCGCTCAAGATGAGTGGCTTCTTCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp CTCCGCCCAGTATTTCCCATTGATGAAGAAGAGGCCTaGGATCATGATGAACACCCATACTGCCAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: LRPVFPIDEEEA*DHDEHPYCQVQ
Trigger: CTGAACCTGGCAGTATGGGTGTTCATCATGATCGCAGGCCTCTTCTTCATCAATGGGAAATACTGGGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp CAGGAGAACAAGCTTCCTTCTCACAGTCAGCCAGAATaGCCTCCTTCTTCTTGGTGTGCTCCTCAGACAAGA +
Preference number: 6 (lower is better)
Translates to: QENKLPSHSQPE*PPSSWCAPQTR
Trigger: TCTTGTCTGAGGAGCACACCAAGAAGAAGGAGGGCATTCTGGCTGACTGTGAGAAGGAAGCTTGTTCTCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp TCAGCTGATGGAAGGGGGCTACAAAGCCTTAGTGGATaGTTCTGGAACTCATCTAGTGAACAGGGATCTCCC +
Preference number: 6 (lower is better)
Translates to: SADGRGLQSLSG*FWNSSSEQGSP
Trigger: GGGAGATCCCTGTTCACTAGATGAGTTCCAGAACCATCCACTAAGGCTTTGTAGCCCCCTTCCATCAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 72 bp CAGAACAACCAGAAGGATGGCCCACCAGCTCTGCTCTaGGATGTAGTCAGAACCAAAGATGATGAAGGAGCA +
Preference number: 6 (lower is better)
Translates to: QNNQKDGPPALL*DVVRTKDDEGA
Trigger: TGCTCCTTCATCATCTTTGGTTCTGACTACATCTCAGAGCAGAGCTGGTGGGCCATCCTTCTGGTTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp AGGCCTGCGATCATGATGAACACCCATACTGCCAGGTTCAGCACATaGAGAACATTGTTGAAGCCTATGGAATTCTTCACCCCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: RPAIMMNTHTARFST*RTLLKPMEFFTPRA
Trigger: TGCTCTGGGGGTGAAGAATTCCATAGGCTTCAACAATGTTCTCAATGTGCTGAACCTGGCAGTATGGGTGTTCATCATGATCGCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp GCCAGAATGCCCTCCTTCTTCTTGGTGTGCTCCTCAGACAAGAACTaGACAAAACCATCAATGTCACTCTCAGGTTGGTATCGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: ARMPSFFLVCSSDKN*TKPSMSLSGWYRRS
Trigger: GCTCCTTCGATACCAACCTGAGAGTGACATTGATGGTTTTGTCAAGTTCTTGTCTGAGGAGCACACCAAGAAGAAGGAGGGCATTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 72 bp CGCTTTGCTACTTGTCCGGCCGTTTGCCTTCGCATCTaGCATCTGTTGGTAATAGAAGCCTTTGTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: RFATCPAVCLRI*HLLVIEAFVFS
Trigger: ACTGAAGACAAAGGCTTCTATTACCAACAGATGTCAGATGCGAAGGCAAACGGCCGGACAAGTAGCAAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp GAAGAAGAGGCCTGCGATCATGATGAACACCCATACTaGCAGGTTCAGCACATTGAGAACATTGTTGAAGCC +
Preference number: 6 (lower is better)
Translates to: EEEACDHDEHPY*QVQHIENIVEA
Trigger: GGCTTCAACAATGTTCTCAATGTGCTGAACCTGGCAGTATGGGTGTTCATCATGATCGCAGGCCTCTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CCA 72 bp GGTCCATTTTGCCTGGAAGGCCCAGCCGGATTCTCATaGTGTAATAATGAGGCCCAATCAGCTTCTTTAACT +
Preference number: 6 (lower is better)
Translates to: GPFCLEGPAGFS*CNNEAQSASLT
Trigger: AGTTAAAGAAGCTGATTGGGCCTCATTATTACACCATGAGAATCCGGCTGGGCCTTCCAGGCAAAATGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 72 bp TCCTTCTCACAGTCAGCCAGAATGCCCTCCTTCTTCTaGGTGTGCTCCTCAGACAAGAACTTGACAAAACCA +
Preference number: 6 (lower is better)
Translates to: SFSQSARMPSFF*VCSSDKNLTKP
Trigger: TGGTTTTGTCAAGTTCTTGTCTGAGGAGCACACCAAGAAGAAGGAGGGCATTCTGGCTGACTGTGAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 72 bp TGCTTTTGCTCTTCGCTTTGCTACTTGTCCGGCCGTTaGCCTTCGCATCTGACATCTGTTGGTAATAGAAGC +
Preference number: 6 (lower is better)
Translates to: CFCSSLCYLSGR*PSHLTSVGNRS
Trigger: GCTTCTATTACCAACAGATGTCAGATGCGAAGGCAAACGGCCGGACAAGTAGCAAAGCGAAGAGCAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 72 bp TCTGAGTTCTGTTTGTGTTTGCTTTTGCTCTTCGCTTaGCTACTTGTCCGGCCGTTTGCCTTCGCATCTGAC +
Preference number: 6 (lower is better)
Translates to: SEFCLCLLLLFA*LLVRPFAFASD
Trigger: GTCAGATGCGAAGGCAAACGGCCGGACAAGTAGCAAAGCGAAGAGCAAAAGCAAACACAAACAGAACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS GCA 72 bp TCACAGTCAGCCAGAATGCCCTCCTTCTTCTTGGTGTaGTCCTCAGACAAGAACTTGACAAAACCATCAATG +
Preference number: 6 (lower is better)
Translates to: SQSARMPSFFLV*SSDKNLTKPSM
Trigger: CATTGATGGTTTTGTCAAGTTCTTGTCTGAGGAGCACACCAAGAAGAAGGAGGGCATTCTGGCTGACTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 72 bp TCTGTTTGTGTTTGCTTTTGCTCTTCGCTTTGCTACTaGTCCGGCCGTTTGCCTTCGCATCTGACATCTGTT +
Preference number: 6 (lower is better)
Translates to: SVCVCFCSSLCY*SGRLPSHLTSV
Trigger: AACAGATGTCAGATGCGAAGGCAAACGGCCGGACAAGTAGCAAAGCGAAGAGCAAAAGCAAACACAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp ATGATGAACACCCATACTGCCAGGTTCAGCACATTGAGAACATTGTaGAAGCCTATGGAATTCTTCACCCCCAGAGCAACAATGATGGTC +
Preference number: 6 (lower is better)
Translates to: MMNTHTARFSTLRTL*KPMEFFTPRATMMV
Trigger: GACCATCATTGTTGCTCTGGGGGTGAAGAATTCCATAGGCTTCAACAATGTTCTCAATGTGCTGAACCTGGCAGTATGGGTGTTCATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS CAA 90 bp GTTTGTGTTTGCTTTTGCTCTTCGCTTTGCTACTTGTCCGGCCGTTaGCCTTCGCATCTGACATCTGTTGGTAATAGAAGCCTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: VCVCFCSSLCYLSGR*PSHLTSVGNRSLCL
Trigger: AAGACAAAGGCTTCTATTACCAACAGATGTCAGATGCGAAGGCAAACGGCCGGACAAGTAGCAAAGCGAAGAGCAAAAGCAAACACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6
CDS TCA 72 bp CCTCCTTCTTCTTGGTGTGCTCCTCAGACAAGAACTTaGCAAAACCATCAATGTCACTCTCAGGTTGGTATC +
Preference number: 6 (lower is better)
Translates to: PPSSWCAPQTRT*QNHQCHSQVGI
Trigger: GATACCAACCTGAGAGTGACATTGATGGTTTTGTCAAGTTCTTGTCTGAGGAGCACACCAAGAAGAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231706.6