RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A7 (Homo sapiens)

Ensembl gene IDs: ENSG00000011083

Ensembl transcript IDs: ENST00000230671.7, ENST00000513403.1, ENST00000524041.1

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCACTCTCCTCTTTGAGGGACCCACAGTACCAAGGGCTACCCTCTaGCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTG +
Preference number: 1 (lower is better)
Translates to: PTLLFEGPTVPRATL*PLRLPPHRARAHVL
Trigger: CAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGCAGAGGGTAGCCCTTGGTACTGTGGGTCCCTCAAAGAGGAGAGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR CCA 90 bp CTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGGGTaGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTC +
Preference number: 1 (lower is better)
Translates to: LPPHRARAHVLEQGG*PQDQPAMCMGHLLV
Trigger: GACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR CCA 90 bp TCTGCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTaGAACAAGGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGG +
Preference number: 1 (lower is better)
Translates to: SALCVYPHTGPGPMS*NKVGGLRTSQPCVW
Trigger: CCATACACATGGCTGGCTGGTCCTGAGGCCACCCACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR TCA 90 bp AAGCGGCAGGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTaGGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: KRQGGWVAQAGNTMP*EAPRVCLTAEGPGW
Trigger: CCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCCTGCCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR GCA 90 bp TGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTGCGTTGCTGTaGCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCT +
Preference number: 1 (lower is better)
Translates to: CVLQLRDQAGVAALL*RRDPLCPWSGAAGS
Trigger: AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR GCA 90 bp CCAGGGCCTCGGAGCCTCAAGAGCCTCTGTAGCCCTGACCTTCCCTaGCCAACTCAAGATTCTGGTTGTGCTAAGGTGTGTGGGGACAGG +
Preference number: 1 (lower is better)
Translates to: PGPRSLKSLCSPDLP*PTQDSGCAKVCGDR
Trigger: CCTGTCCCCACACACCTTAGCACAACCAGAATCTTGAGTTGGGCAGGGAAGGTCAGGGCTACAGAGGCTCTTGAGGCTCCGAGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR CCA 90 bp GCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTaGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTGGAATTC +
Preference number: 1 (lower is better)
Translates to: AGVAALLCRRDPLCP*SGAAGSPRWILLEF
Trigger: GAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR TCA 90 bp CCGCTCCACCCTGTCCCGTCCGATCCGCTCTGCACAGATCTGGAATaGTACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCT +
Preference number: 1 (lower is better)
Translates to: PLHPVPSDPLCTDLE*YSSSCKSPAHPIIP
Trigger: AGGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGAGCGGATCGGACGGGACAGGGTGGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR TCA 90 bp CGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGTGGGTCTaGGTATGCCTGTGTGTGTGTGTAGGGGGTTGTCAGAGGTTTCAG +
Preference number: 1 (lower is better)
Translates to: RKVGLSWIILSFEWV*VCLCVCVGGCQRFQ
Trigger: CTGAAACCTCTGACAACCCCCTACACACACACACAGGCATACTCAGACCCACTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGGAAGGTGGTGCCGGCTaGCCCATGGGAAAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVEGGAG*PMGKGA
Trigger: AGCTCCCTTTCCCATGGGGCAGCCGGCACCACCTTC...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGCCAGCTTTTGCGGCTTaGGGTCCAGTGGGTGAAGGG +
Preference number: 2 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVPAFAA*GPVGEG
Trigger: CCCTTCACCCACTGGACCCCAAGCCGCAAAAGCTGG...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCAGAAGGGACCCCCACTaGGGGACTGGCATCCCTATG +
Preference number: 2 (lower is better)
Translates to: STLAQATGSSFPLCTGLPRRDPH*GTGIPM
Trigger: CATAGGGATGCCAGTCCCCCAGTGGGGGTCCCTTCT...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR CAA 90 bp CCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTGCGTaGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: PVCVLQLRDQAGVAA*LCRRDPLCPWSGAA
Trigger: AGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR-3UTR TCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCCCCAGAGGGCACAGCTaGCCTTTGCAGGCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: STLAQATGSSFPLCTGLPPRGHS*PLQASK
Trigger: CTTAGAAGCCTGCAAAGGTCAGCTGTGCCCTCTGGG...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCACTCCTTCAGGAGTCCTaGATACAGGAGCCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPLLQES*IQEPPG
Trigger: CCCTGGGGGCTCCTGTATGCAGGACTCCTGAAGGAG...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCCCCCCACTGGGGGACTaGCATCCCTATGGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: GPPPSPMVALSPTMKASFPPLGD*HPYGRP
Trigger: GGGCCTGCCATAGGGATGCCAGTCCCCCAGTGGGGG...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCAGGAGAGGCAGAGGCTaGAGAAGGGACCCCCACTGG +
Preference number: 2 (lower is better)
Translates to: GPPPSPMVALSPTMKASFRRGRG*RRDPHW
Trigger: CCAGTGGGGGTCCCTTCTGCAGCCTCTGCCTCTCCT...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR TCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCTCTAAGAAGGGACTGTaGGGTCCCGGGCAGGGCCTT +
Preference number: 2 (lower is better)
Translates to: GPPPSPMVALSPTMKASFSKKGL*GPGQGL
Trigger: AAGGCCCTGCCCGGGACCTCACAGTCCCTTCTTAGA...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCAAGCCCTGACCTTCCCTaGCCAACTCAAGATTCTGGT +
Preference number: 2 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPSPDLP*PTQDSG
Trigger: ACCAGAATCTTGAGTTGGGCAGGGAAGGTCAGGGCT...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp GTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTTCCGTGGAGTGGAGCTaGTGGTTCTCCCAGGTGGAT +
Preference number: 2 (lower is better)
Translates to: VGGLPKQETPCPEKHPVCSVEWS*WFSQVD
Trigger: ATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGA...ACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR-3UTR GCA 90 bp CAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACGTCGCTGCGTTGCTGTaGCGCAGAGATCCACTCTGT +
Preference number: 2 (lower is better)
Translates to: QETPCPEKHPVCVLQLRDVAALL*RRDPLC
Trigger: ACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGAC...GTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR-3UTR CCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCTGGTCAGGAGGCGTaGGTTCAAGTCCCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKAGQEA*VQVPSA
Trigger: GGCAGAGGGGACTTGAACCCACGCCTCCTGACCAGC...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CCA 90 bp GTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTGGAGTGGAGCTGCTaGTTCTCCCAGGTGGATTTT +
Preference number: 2 (lower is better)
Translates to: VGGLPKQETPCPEKHPVCVEWSC*FSQVDF
Trigger: AAAATCCACCTGGGAGAACCAGCAGCTCCACTCCAC...ACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR-3UTR CCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGCGGCTTGGGGTCCAGTaGGTGAAGGGGTGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKRLGVQ*VKGWSL
Trigger: CAAAGACCACCCCTTCACCCACTGGACCCCAAGCCG...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCAAAGTCCCCTCTGCCATaGGACCTGGGGCAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPKSPLP*DLGQVP
Trigger: AGGGACTTGCCCCAGGTCGCATGGCAGAGGGGACTT...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGAACCCTCTTGGTCTCTaGCCAGGCAGCTCAGCATCC +
Preference number: 2 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKNPLGL*PGSSAS
Trigger: GGATGCTGAGCTGCCTGGGCAGAGACCAAGAGGGTT...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR TCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCGAGGGGTGTAGGCCCTaGATAGAGATGAGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPEGCRP*IEMRRW
Trigger: CCACCTTCTCATCTCTATTCAGGGCCTACACCCCTC...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR TCA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCCCCACCTAACTCATTaGCCTTTGATCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHPHLTH*PLIPRA
Trigger: GGCCCTGGGGATCAAAGGTCAATGAGTTAGGTGGGG...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCAGAGATGAGAAGGTGGTaGCGGCTGCCCCATGGGAAA +
Preference number: 2 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPEMRRW*RLPHGK
Trigger: TTTCCCATGGGGCAGCCGGCACCACCTTCTCATCTC...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR GCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGGTCTTTGTCTGAAGTaGTGGGGCCTCCTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKGLCLK*WGLLSP
Trigger: TGGGGAAAGGAGGCCCCAGCACTTCAGACAAAGACC...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CCA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCATAGAGATGAGAAGGTaGTGCCGGCTGCCCCATGGG +
Preference number: 2 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPIEMRR*CRLPHG
Trigger: CCCATGGGGCAGCCGGCACCACCTTCTCATCTCTAT...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CCA 90 bp CAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACGCTGGTTCTCCCAGGTaGATTTTGCTGGAATTCTCC +
Preference number: 2 (lower is better)
Translates to: QETPCPEKHPVCVLQLRDAGSPR*ILLEFS
Trigger: GGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGC...GTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR-3UTR GCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCGGCACAGCTGACCTTTaGAGGCTTCTAAGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPGTADL*RLLRRD
Trigger: GTCCCTTCTTAGAAGCCTGCAAAGGTCAGCTGTGCC...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CCA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCAAAGTAGGGCTGAGTTaGATCATTCTCAGCTTTGAG +
Preference number: 2 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPKVGLS*IILSFE
Trigger: CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTT...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR CCA 72 bp TGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTaGAACAAGGTGGGTGGCCTCAGGACCAGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: CVYPHTGPGPMS*NKVGGLRTSQP
Trigger: TGGCTGGCTGGTCCTGAGGCCACCCACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR GCA 72 bp CTCTTTGAGGGACCCACAGTACCAAGGGCTACCCTCTaGCCTCTGCGTCTACCCCCACACCGGGCCCGGGCC +
Preference number: 3 (lower is better)
Translates to: LFEGPTVPRATL*PLRLPPHRARA
Trigger: GGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGCAGAGGGTAGCCCTTGGTACTGTGGGTCCCTCAAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR CCA 72 bp CACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGGGTaGCCTCAGGACCAGCCAGCCATGTGTATGGGCCAC +
Preference number: 3 (lower is better)
Translates to: HRARAHVLEQGG*PQDQPAMCMGH
Trigger: GTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACCTTGTTCCAGGACATGGGCCCGGGCCCGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CAA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCACTACCTCCCCAGCTTTaGCGGCTTGGGGTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPLPPQL*RLGVQW
Trigger: CCACTGGACCCCAAGCCGCAAAAGCTGGGGAGGTAG...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR CCA 72 bp GCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTaGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACT +
Preference number: 3 (lower is better)
Translates to: APRVCLTAEGPG*GRCVAVPQRST
Trigger: AGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR-3UTR CAA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCCAGCTCTTTCCCACTTaGCACAGGCCTCCCCGCTCC +
Preference number: 3 (lower is better)
Translates to: GPPPSPMVALSPTMKASFQLFPT*HRPPRS
Trigger: GGAGCGGGGAGGCCTGTGCAAAGTGGGAAAGAGCTG...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CAA 90 bp CAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACGCTGGGGTCGCTGCGTaGCTGTGCCGCAGAGATCCA +
Preference number: 3 (lower is better)
Translates to: QETPCPEKHPVCVLQLRDAGVAA*LCRRDP
Trigger: TGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGC...GTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR CCA 72 bp GCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTaGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTTG +
Preference number: 3 (lower is better)
Translates to: AALLCRRDPLCP*SGAAGSPRWIL
Trigger: CAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR-3UTR CAA 90 bp GGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTTCTCCCAGGTGGATTTaGCTGGAATTCTCCCATGTC +
Preference number: 3 (lower is better)
Translates to: GVAALLCRRDPLCPWSGASPRWI*LEFSHV
Trigger: GACATGGGAGAATTCCAGCAAAATCCACCTGGGAGA...AGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR GCA 72 bp GTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTaGTGGTTCTCCCAGGTGGATTTTGCTGGAATTCTC +
Preference number: 3 (lower is better)
Translates to: VPQRSTLSVEWS*WFSQVDFAGIL
Trigger: GAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR CCA 72 bp CCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTaGTTCTCCCAGGTGGATTTTGCTGGAATTCTCCCA +
Preference number: 3 (lower is better)
Translates to: PQRSTLSVEWSC*FSQVDFAGILP
Trigger: TGGGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
3UTR-3UTR CAA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCAGTGTCTCCAACCCTCTaGGTCTCTGCCCAGGCAGCT +
Preference number: 3 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPVSPTL*VSAQAA
Trigger: AGCTGCCTGGGCAGAGACCAAGAGGGTTGGAGACAC...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CAA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATTCCCCACCTAACTCATaGACCTTTGATCCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHSPPNS*TFDPQG
Trigger: GCCCTGGGGATCAAAGGTCAATGAGTTAGGTGGGGA...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR TCA 72 bp GGGCTGAGTTGGATCATTCTCAGCTTTGAGTGGGTCTaGGTATGCCTGTGTGTGTGTGTAGGGGGTTGTCAG +
Preference number: 3 (lower is better)
Translates to: GLSWIILSFEWV*VCLCVCVGGCQ
Trigger: CTGACAACCCCCTACACACACACACAGGCATACTCAGACCCACTCAAAGCTGAGAATGATCCAACTCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
3UTR-3UTR CAA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATAGTTTTCCTTCTGTCTaGAACCCTCCTGTAACCTGG +
Preference number: 3 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHSFPSV*NPPVTW
Trigger: CCAGGTTACAGGAGGGTTCAAGACAGAAGGAAAACT...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCAGGCCCCTGGGAGGGTaGCTCCGCGGACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPRPLGG*LRGPAA
Trigger: TGCTGCTGGTCCGCGGAGTCACCCTCCCAGGGGCCT...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTTGGCCGGGGCTCAGCTaGCCCGGAGCGCAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: GVAALLCRRDPLCPWSGAWPGLS*PGAQRA
Trigger: CGCTCTCTGCGCTCCGGGGCAGCTGAGCCCCGGCCA...AGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGCTACCCTCTGCCCTCTaGGTCTACCCCCACACCGGG +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVLPSAL*VYPHTG
Trigger: CCCGGTGTGGGGGTAGACGCAGAGGGCAGAGGGTAG...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCCGCAGCGCCCGAGGCTaGGGAAGGGTGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPRSARG*GRVHCC
Trigger: GCAGCAGTGCACCCTTCCCCAGCCTCGGGCGCTGCG...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCGCAGCCCCAGCACCCTaGCTCAGGCCACCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPAAPAP*LRPPAA
Trigger: AGCTGCCGGTGGCCTGAGCCAGGGTGCTGGGGCTGC...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGTGGCCACTGCGCCTTTaGCCCCGCGGCTCCCGCGCA +
Preference number: 4 (lower is better)
Translates to: PCPEKHPVCVLQLRDQAGWPLRL*PRGSRA
Trigger: TGCGCGGGAGCCGCGGGGGCAAAGGCGCAGTGGCCA...CCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGAGGAGAGGCAGAGGCTaGAGAAGGGACCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVRRGRG*RRDPHW
Trigger: CCAGTGGGGGTCCCTTCTGCAGCCTCTGCCTCTCCT...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCCCTTCCAGGCCCCTaGGAGGGTGACTCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: GVAALLCRRDPLCPWSGAALPGP*EGDSAD
Trigger: GTCCGCGGAGTCACCCTCCCAGGGGCCTGGAAGGGC...AGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCCCCCCACTGGGGGACTaGCATCCCTATGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPPPLGD*HPYGRP
Trigger: GGGCCTGCCATAGGGATGCCAGTCCCCCAGTGGGGG...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
68% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGTACAGAGGAACACGATaGCCCAGGCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVYRGTR*PRPAAG
Trigger: GCCTGCTGCTGGCCTGGGTCATCGTGTTCCTCTGTA...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GCGGCAGGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCTGCCTTGTCTGTCCCTaGGCAGCGCCCGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAGWVGCPSRKHHALRSTCLVCP*AAPEAG
Trigger: CCCAGCCTCGGGCGCTGCGCAGGGACAGACAAGGCA...GGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCCTGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCAGCGCGGGCAGGGCGCTaGGAATGCCTTGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPARAGR*ECLVCP
Trigger: GGGACAGACAAGGCATTCGCAGCGCCCTGCCCGCGC...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTCGCAGCGCCCGAGGCTaGGGAAGGGTGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: AALLCRRDPLCPWSGAAGRSARG*GRVHCC
Trigger: GCAGCAGTGCACCCTTCCCCAGCCTCGGGCGCTGCG...ACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGGGTCATCAGCAGGTCTaGGGTGACAGGCTTGCGGAG +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVGHQQV*GDRLAE
Trigger: CTCCGCAAGCCTGTCACCCCAGACCTGCTGATGACC...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTCCATGGCCGGCCGGCTaGCCTGTTGGAGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VGGLPKQETPCPEKHPVCPWPAG*PVGAAP
Trigger: GGGAGCGGCTCCAACAGGCCAGCCGGCCGGCCATGG...ACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGCACGGTCCACCTCGATaGCCGTGTTCTCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVHGPPR*PCSRSW
Trigger: CCAGCTTCGAGAACACGGCCATCGAGGTGGACCGTG...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGAGAAGGGACCCCCACTaGGGGACTGGCATCCCTATG +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVRRDPH*GTGIPM
Trigger: CATAGGGATGCCAGTCCCCCAGTGGGGGTCCCTTCT...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp GTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTCCACCAAGCCCACGATaGGCAGCATGGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: VAALLCRRDPLCPWSGAAPPSPR*AAWLRR
Trigger: CCGGCGCAGCCATGCTGCTCATCGTGGGCTTGGTGG...AGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp CCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTGGTCCGCTGGCCACTaGGCCTTTGCCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: PQRSTLSVEWSCWFSQVDWSAGH*AFAPAA
Trigger: AGCCGCGGGGGCAAAGGCGCAGTGGCCAGCGGACCA...ATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGAGCTCTTTCCCACTTTaGACAGGCCTCCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVSSFPL*TGLPAP
Trigger: TGGAGCGGGGAGGCCTGTGCAAAGTGGGAAAGAGCT...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCCGAGAGATGGTCCGCTaGCCACTGCGCCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: WGRCVAVPQRSTLSVEWSREMVR*PLRLCP
Trigger: GGGGCAAAGGCGCAGTGGCCAGCGGACCATCTCTCG...GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGGGAGCTTCTTCATCTTaGAGAGCGGGTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GWGRCVAVPQRSTLSVEWGASSS*RAGGRG
Trigger: GCCCCGGCCACCCGCTCTCCAAGATGAAGAAGCTCC...CCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCGGCCAAGAGCGTGGCTaGGGACAGGAACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPGQERG*GQEQPA
Trigger: TGCTGGCTGTTCCTGTCCCCAGCCACGCTCTTGGCC...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCAGTGCCGGCTGCCCCATaGGAAAGGGAGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPVPAAP*ERELAG
Trigger: ACCAGCCAGCTCCCTTTCCCATGGGGCAGCCGGCAC...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CAGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTTCAGCAGGTCTGGGGTaGCAGGCTTGCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QAGVAALLCRRDPLCPWSSAGLG*QACGGE
Trigger: CTCACCTCCGCAAGCCTGTCACCCCAGACCTGCTGA...ACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp CAGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGAGCCGCTCCCAGAGTaGGCCCTCTTCTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QAGVAALLCRRDPLCPWSEPLPE*ALFSKH
Trigger: GTGCTTCGAGAAGAGGGCTCACTCTGGGAGCGGCTC...ACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCGCAGGAAGTCCAGCTTaGCTGTCCAGTTCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPAGSPA*LSSSPG
Trigger: ACCGGGGGAACTGGACAGGCAAGCTGGACTTCCTGC...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCCACCAGTTGCCACAGTaGTCCCAGGGTAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPHQLPQ*SQGRSL
Trigger: CAGCGACCTACCCTGGGAGCACTGTGGCAACTGGTG...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTGCAGGCCCATCAGGATaGCCAGCAGCTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AALLCRRDPLCPWSGAAGAGPSG*PAAQPR
Trigger: CCTGGGCTGAGCTGCTGGGCATCCTGATGGGCCTGC...ACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCCTCCTTCAGGAGTCCTaGATACAGGAGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPLLQES*IQEPPG
Trigger: CCCTGGGGGCTCCTGTATGCAGGACTCCTGAAGGAG...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp AGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGCCCCGTTGCCGTCCTTaGAGACTCTGTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RLGSLRCCAAEIHSVRGVPRCRP*RLCAPG
Trigger: GCCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGG...CACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGGGGCCGCAGGTAGTATaGGAACTCATCTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVGPQVV*ELICHS
Trigger: GCTGTGACAGATGAGTTCCCATACTACCTGCGGCCC...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGGCCGGCTGGCCTGTTaGAGCCGCTCCCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VGGLPKQETPCPEKHPVCGRLAC*SRSQSE
Trigger: CTCACTCTGGGAGCGGCTCCAACAGGCCAGCCGGCC...ACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp TGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCATGGTCCCCAGTCCATaGCCGGCCGGCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: CPEKHPVCVLQLRDQAGVMVPSP*PAGWPV
Trigger: AACAGGCCAGCCGGCCGGCCATGGACTGGGGACCAT...GACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTAGTGGCTTTGGTGACTaGCTCCCAGCCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GVAALLCRRDPLCPWSGASGFGD*LPASVA
Trigger: GGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACT...AGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCTGTCCTGGAACAAGGTaGGTGGCCTCAGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPCPGTR*VASGPA
Trigger: GGCTGGTCCTGAGGCCACCCACCTTGTTCCAGGACA...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp GCGGCAGGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCACAGGCTTGCGGAGGTaGGCTCCCTGGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AAGWVGCPSRKHHALRSTTGLRR*APWSFF
Trigger: GAAGAAGCTCCAGGGAGCTCACCTCCGCAAGCCTGT...GGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCCTGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp GGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTTACAGAGGAACACGATaGCCCAGGCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GVAALLCRRDPLCPWSGAYRGTR*PRPAAG
Trigger: GCCTGCTGCTGGCCTGGGTCATCGTGTTCCTCTGTA...AGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp CAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACAGGCCCCTGGGAGGGTaGCTCCGCGGACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QETPCPEKHPVCVLQLRDRPLGG*LRGPAA
Trigger: TGCTGCTGGTCCGCGGAGTCACCCTCCCAGGGGCCT...GTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCACACGCAGATGAGCCCTaGGAACACCGCCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPHADEP*EHRLLG
Trigger: CCCAAGAAGGCGGTGTTCTCAGGGCTCATCTGCGTG...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp GCGGCAGGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCTGCCCCCATCAGTGGTaGGGATCAGCCCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: AAGWVGCPSRKHHALRSTCPHQW*GSAPSG
Trigger: ACCTGATGGGGCTGATCCTCACCACTGATGGGGGCA...GGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCCTGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp CCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGTGCCAGCTGGGATCATaGGGCAGGACAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PCPEKHPVCVLQLRDQAGCQLGS*GRTAGP
Trigger: TGGGCCTGCTGTCCTGCCTCATGATCCCAGCTGGCA...CCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCTGTTCTCGAAGCTGGTaGTGCCCCCGTACTTGCGCA +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPCSRSW*CPRTCA
Trigger: TGCGCAAGTACGGGGGCATCACCAGCTTCGAGAACA...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCCACCAGTTGCCACAGTaGTCCCAGGGTAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: WGRCVAVPQRSTLSVEWSHQLPQ*SQGRSL
Trigger: CAGCGACCTACCCTGGGAGCACTGTGGCAACTGGTG...GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTTGCCGATGCCCTGGCTaGCTTGGATGTGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: GVAALLCRRDPLCPWSGACRCPG*LGCGGR
Trigger: ACGTCCTCCACATCCAAGGCAGCCAGGGCATCGGCA...AGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCAGCGGGAAGCGGTAACTaGCATACTCCGAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPAGSGN*HTPRAG
Trigger: ACCAGCCCTCGGAGTATGGCAGTTACCGCTTCCCGC...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCCGAGGGCACGAGAGATaGTCCGCTGGCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFRGHER*SAGHCA
Trigger: GGCGCAGTGGCCAGCGGACCATCTCTCGTGCCCTCG...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTCCTAGGCTGGAGAACTaGCCCAGGGAGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GWVGCPSRKHHALRSTPCPRLEN*PRESSR
Trigger: CCTGGAGCTCTCCCTGGGCCAGTTCTCCAGCCTAGG...ACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp CCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGGCCAAGAGCGTGGCTaGGGACAGGAACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PCPEKHPVCVLQLRDQAGGQERG*GQEQPA
Trigger: TGCTGGCTGTTCCTGTCCCCAGCCACGCTCTTGGCC...CCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCCACCAGCATGCCAGCTaGGATCATGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPHQHAS*DHEAGQ
Trigger: CTGTCCTGCCTCATGATCCCAGCTGGCATGCTGGTG...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGCAGTGGGTGAAGGGGTaGTCTTTGTCTGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVQWVKG*SLSEVL
Trigger: CAGCACTTCAGACAAAGACCACCCCTTCACCCACTG...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CAGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTAAGCGGCAGGGTGGGTaGGTTGCCCAAGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: QAGVAALLCRRDPLCPWSKRQGG*VAQAGN
Trigger: GTTTCCTGCTTGGGCAACCCACCCACCCTGCCGCTT...ACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp GCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTCACGCAGATGAGCCCTaGGAACACCGCCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AALLCRRDPLCPWSGAAGHADEP*EHRLLG
Trigger: CCCAAGAAGGCGGTGTTCTCAGGGCTCATCTGCGTG...ACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp AGCGGCAGGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACTGTGTGTCTTACAGCTaGGGGACCAGGCTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: SGRVGGLPKQETPCPEKHCVSYS*GTRLGS
Trigger: CGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACA...GTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCCTGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCTGGCCACTGCGCCTTTaGCCCCGCGGCTCCCGCGCA +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPWPLRL*PRGSRA
Trigger: TGCGCGGGAGCCGCGGGGGCAAAGGCGCAGTGGCCA...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCACCAGTTCCCCCGGTGTaGAGCAAAGTCCACATCCAG +
Preference number: 4 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPPVPPV*SKVHIQ
Trigger: CTGGATGTGGACTTTGCTGCACACCGGGGGAACTGG...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGATGAGCAGCATGGCTaGGCCGGCGCCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GWVGCPSRKHHALRSTPCDEQHG*AGAFEE
Trigger: CTCTTCAAAGGCGCCGGCGCAGCCATGCTGCTCATC...ACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp AGCGGCAGGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACGCGGGAAGCGGTAACTaGCATACTCCGAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGRVGGLPKQETPCPEKHAGSGN*HTPRAG
Trigger: ACCAGCCCTCGGAGTATGGCAGTTACCGCTTCCCGC...GTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCCTGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGCCGGGCAGGGCCTTCTaGCCGCCTGCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKPGRAF*PPASCL
Trigger: GAGGCAGGAGGCAGGCGGGCAGAAGGCCCTGCCCGG...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCATGCCCCACGGGAGAATaGTGTGTGCATGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPCPTGE*CVHEPC
Trigger: GCATGGCTCATGCACACAGCATTCTCCCGTGGGGCA...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCTGGGGTCGCTGCGTTaGTGTGCCGCAGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: ALLCRRDPLCPWSGAAGSLGSLR*CAAEIH
Trigger: GTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAG...AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCCGAGAGATGGTCCGCTaGCCACTGCGCCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFREMVR*PLRLCP
Trigger: GGGGCAAAGGCGCAGTGGCCAGCGGACCATCTCTCG...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTGGTCATCAGCAGGTCTaGGGTGACAGGCTTGCGGAG +
Preference number: 4 (lower is better)
Translates to: PEKHPVCVLQLRDQAGVAGHQQV*GDRLAE
Trigger: CTCCGCAAGCCTGTCACCCCAGACCTGCTGATGACC...AGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTCATCGCCCTGGTCACTaGGGGTCATCAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GWVGCPSRKHHALRSTPCHRPGH*GSSAGL
Trigger: CAGACCTGCTGATGACCCCCAGTGACCAGGGCGATG...ACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTAGGTCGACATCGCCCTaGTCACTGGGGGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: VAALLCRRDPLCPWSGAARSTSP*SLGVIS
Trigger: GCTGATGACCCCCAGTGACCAGGGCGATGTCGACCT...AGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp TGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGGCCAGGGCCTGCTTTaGCTACTTGGTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: CPEKHPVCVLQLRDQAGVGQGLL*LLGPQA
Trigger: TGCCTGTGGACCAAGTAGCCAAAGCAGGCCCTGGCC...GACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp GTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTAGGGTAGGTCGCTGGTaGGGGAGGCGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VGGLPKQETPCPEKHPVCRVGRW*GRRRGR
Trigger: TCTACCTCTTCGCCTCCCTCACCAGCGACCTACCCT...ACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCAAAGGACCAGAAGGGTaGCAGAGGCAGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPKGPEG*QRQHGH
Trigger: ATGACCATGCTGCCTCTGTCACCCTTCTGGTCCTTT...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCGAGCCGCTCCCAGAGTaGGCCCTCTTCTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFEPLPE*ALFSKH
Trigger: GTGCTTCGAGAAGAGGGCTCACTCTGGGAGCGGCTC...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTGCAGGAAGTCCAGCTTaGCTGTCCAGTTCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: ALLCRRDPLCPWSGAAGSAGSPA*LSSSPG
Trigger: ACCGGGGGAACTGGACAGGCAAGCTGGACTTCCTGC...AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCCACAGGGAGGCCTGTTaGATGAGGGAACCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFHREAC*MREPCP
Trigger: GGGGCAGGGTTCCCTCATGCAACAGGCCTCCCTGTG...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTGTCGCTGCGTTGCTGTaGCGCAGAGATCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: AALLCRRDPLCPWSGAAGVAALL*RRDPLC
Trigger: ACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGAC...ACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCGGAGCTTCTTCATCTTaGAGAGCGGGTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFGASSS*RAGGRG
Trigger: GCCCCGGCCACCCGCTCTCCAAGATGAAGAAGCTCC...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTAGGCGCCTCCTCCATTaGTGTACGCTCGATAGGGGA +
Preference number: 4 (lower is better)
Translates to: PEKHPVCVLQLRDQAGVARRLLH*CTLDRG
Trigger: TCCCCTATCGAGCGTACACCAATGGAGGAGGCGCCT...AGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp AGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGCATGGTCATGGCCTGTaGGTAGACGACAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RLGSLRCCAAEIHSVRGVHGHGL*VDDKGQ
Trigger: CTGGCCTTTGTCGTCTACCCACAGGCCATGACCATG...CACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTCACCAGCATGCCAGCTaGGATCATGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: GWVGCPSRKHHALRSTPCHQHAS*DHEAGQ
Trigger: CTGTCCTGCCTCATGATCCCAGCTGGCATGCTGGTG...ACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGCCACCAAGCCCACGATaGGCAGCATGGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKPPSPR*AAWLRR
Trigger: CCGGCGCAGCCATGCTGCTCATCGTGGGCTTGGTGG...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATGGTCCGCTGGCCACTaGGCCTTTGCCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPWSAGH*AFAPAA
Trigger: AGCCGCGGGGGCAAAGGCGCAGTGGCCAGCGGACCA...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTCCAGTTCCCCCGGTGTaGAGCAAAGTCCACATCCAG +
Preference number: 4 (lower is better)
Translates to: VGGLPKQETPCPEKHPVCPVPPV*SKVHIQ
Trigger: CTGGATGTGGACTTTGCTGCACACCGGGGGAACTGG...ACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTCTGTGTTCCACCAGTTaGCACAGTGCTCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: VAALLCRRDPLCPWSGAALCSTS*HSAPRV
Trigger: TACCCTGGGAGCACTGTGGCAACTGGTGGAACACAG...AGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp CAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGGGGCAGGGCCCCGTTaGCGTCCTTGGAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: QRSTLSVEWSCWFSQVDFGAGPR*RPWRLC
Trigger: ACAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCC...AAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTGGCCAGGCCAGGGCCTaGTTTGGCTACTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: AEIHSVRGVELLVLPGGFGQARA*FGYLVH
Trigger: GTGGACCAAGTAGCCAAAGCAGGCCCTGGCCTGGCC...AAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCAAGTCCCCTCTGCCATaGGACCTGGGGCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFKSPLP*DLGQVP
Trigger: AGGGACTTGCCCCAGGTCGCATGGCAGAGGGGACTT...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCAGCCCTTCCAGGCCCCTaGGAGGGTGACTCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPALPGP*EGDSAD
Trigger: GTCCGCGGAGTCACCCTCCCAGGGGCCTGGAAGGGC...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGAGGCAGCATGGTCATaGCCTGTGGGTAGACGACAA +
Preference number: 4 (lower is better)
Translates to: GWVGCPSRKHHALRSTPCEAAWS*PVGRRQ
Trigger: TTGTCGTCTACCCACAGGCCATGACCATGCTGCCTC...ACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp CCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTGGGCCGCAGGTAGTATaGGAACTCATCTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PEKHPVCVLQLRDQAGVAGPQVV*ELICHS
Trigger: GCTGTGACAGATGAGTTCCCATACTACCTGCGGCCC...AGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp CCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTAGAACACCGCCTTCTTaGGCCGCAGGTAGTATGGGA +
Preference number: 4 (lower is better)
Translates to: PEKHPVCVLQLRDQAGVARTPPS*AAGSMG
Trigger: TCCCATACTACCTGCGGCCCAAGAAGGCGGTGTTCT...AGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp AAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGGCTCCCAGCCAGCGTaGCCACATACATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: KQETPCPEKHPVCVLQLRGSQPA*PHTCPS
Trigger: GGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCC...CCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCACACCTCCTAGTCCCATaGTTGCCCTGTCACCAACAA +
Preference number: 4 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPHLLVP*LPCHQQ
Trigger: TTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTG...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGTGGAGTGGAGCTGCTaGTTCTCCCAGGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: GVAALLCRRDPLCPWSGAVEWSC*FSQVDF
Trigger: AAAATCCACCTGGGAGAACCAGCAGCTCCACTCCAC...AGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCAGAGCACGTAGGCGATaGTCATGTTGTAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPRARRR*SCCSRW
Trigger: CCATCTACTACAACATGATCATCGCCTACGTGCTCT...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp TGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCAAAGGACCAGAAGGGTaGCAGAGGCAGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: CPEKHPVCVLQLRDQAGVKGPEG*QRQHGH
Trigger: ATGACCATGCTGCCTCTGTCACCCTTCTGGTCCTTT...GACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp GCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTACATGGCCACGCAGATaGGCCCTGAGAACACCGCCT +
Preference number: 4 (lower is better)
Translates to: AEIHSVRGVELLVLPGGFTWPRR*ALRTPP
Trigger: AGGCGGTGTTCTCAGGGCTCATCTGCGTGGCCATGT...AAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCGGGAGGCCTGTTGCATaGGGGAACCCTGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPGRPVA*GNPAPR
Trigger: CCGTGGGGCAGGGTTCCCTCATGCAACAGGCCTCCC...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCGGGGCAGGGCCCCGTTaGCGTCCTTGGAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPGAGPR*RPWRLC
Trigger: ACAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCC...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACGCGTGGCCACATACATaGCCGTCCGGTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QETPCPEKHPVCVLQLRDAWPHT*PSGSPP
Trigger: TGGAGGAGAACCGGACGGGCATGTATGTGGCCACGC...GTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCTGCATGAGGGAACCCTaGCCCACGGGAGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFCMREP*PTGECC
Trigger: ACAGCATTCTCCCGTGGGGCAGGGTTCCCTCATGCA...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCAGGCGCCTCCTCCATTaGTGTACGCTCGATAGGGGA +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFRRLLH*CTLDRG
Trigger: TCCCCTATCGAGCGTACACCAATGGAGGAGGCGCCT...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTCCTGCTTTGGCTACTTaGTCCACAGGCACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AEIHSVRGVELLVLPGGFPALAT*STGTPS
Trigger: GCTGGGCGTGCCTGTGGACCAAGTAGCCAAAGCAGG...AAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTGACAGAGGCAGCATaGTCATGGCCTGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VGGLPKQETPCPEKHPVCVTEAA*SWPVGR
Trigger: TCTACCCACAGGCCATGACCATGCTGCCTCTGTCAC...ACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp CCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGAAGCCCAGCATCATGTaGATGTCTCGGCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: PCPEKHPVCVLQLRDQAGKPSIM*MSRQNL
Trigger: GAGGTTCTGCCGAGACATCCACATGATGCTGGGCTT...CCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GGTGGGTGGCCTCAGGACCAGCCAGCCATGTGTATGGGCCACCTCCTAGTCCCACCATACTCCGAGGGCTaGTACTTGACGATGCTATAC +
Preference number: 4 (lower is better)
Translates to: GGWPQDQPAMCMGHLLVPPYSEG*YLTMLY
Trigger: GTATAGCATCGTCAAGTACCAGCCCTCGGAGTATGG...TGGGACTAGGAGGTGGCCCATACACATGGCTGGCTGGTCCTGAGGCCACCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CAGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTCCATACTCCGAGGGCTaGTACTTGACGATGCTATAC +
Preference number: 4 (lower is better)
Translates to: QAGVAALLCRRDPLCPWSPYSEG*YLTMLY
Trigger: GTATAGCATCGTCAAGTACCAGCCCTCGGAGTATGG...ACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCGGCCGGCTGGCCTGTTaGAGCCGCTCCCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPGRLAC*SRSQSE
Trigger: CTCACTCTGGGAGCGGCTCCAACAGGCCAGCCGGCC...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTGATCCACTCTGTCCGTaGAGTGGAGCTGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALLCRRDPLCPWSGAAGSDPLCP*SGAAGS
Trigger: AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATC...AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp GCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTAGTAGAGGCCCGGCTTaGAGCCCAGCATCATGTGGA +
Preference number: 4 (lower is better)
Translates to: AEIHSVRGVELLVLPGGFSRGPA*SPASCG
Trigger: TCCACATGATGCTGGGCTTCAAGCCGGGCCTCTACT...AAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTGAACTGTGTGCTCCTTaGAGGCAGGACAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: ALLCRRDPLCPWSGAAGSELCAP*RQDSIL
Trigger: CAAGATGCTGTCCTGCCTTCAAGGAGCACACAGTTC...AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp GCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTGGAAACACCATGCCCTaGGAAGCACCCCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AEIHSVRGVELLVLPGGFGNTMP*EAPRVC
Trigger: ACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCC...AAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCTGGGGAAGGGTGCACTaGTGCGCCCGCATAGACACC +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPWGRVH*CARIDT
Trigger: GGTGTCTATGCGGGCGCAGCAGTGCACCCTTCCCCA...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCCTGTGTTCCACCAGTTaGCACAGTGCTCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFLCSTS*HSAPRV
Trigger: TACCCTGGGAGCACTGTGGCAACTGGTGGAACACAG...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTTCCTTGGAGACTCTGTaGTCCAGGCAGAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ALLCRRDPLCPWSGAAGSSLETL*SRQSSV
Trigger: CACAGAACTCTGCCTGGAGCACAGAGTCTCCAAGGA...AGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCGCAGGCCCATCAGGATaGCCAGCAGCTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPAGPSG*PAAQPR
Trigger: CCTGGGCTGAGCTGCTGGGCATCCTGATGGGCCTGC...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGAAGGTGGTGCCGGCTaGCCCATGGGAAAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKEGGAG*PMGKGA
Trigger: AGCTCCCTTTCCCATGGGGCAGCCGGCACCACCTTC...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCCGGGAGAATGCTGTGTaGATGAGCCATGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFRENAV*MSHAEA
Trigger: TGCCTCAGCATGGCTCATGCACACAGCATTCTCCCG...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCCCTAGGCTGGAGAACTaGCCCAGGGAGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPPRLEN*PRESSR
Trigger: CCTGGAGCTCTCCCTGGGCCAGTTCTCCAGCCTAGG...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCCCCCGTTGCCGTCCTTaGAGACTCTGTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPPRCRP*RLCAPG
Trigger: GCCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGG...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCCATGGTCATGGCCTGTaGGTAGACGACAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFHGHGL*VDDKGQ
Trigger: CTGGCCTTTGTCGTCTACCCACAGGCCATGACCATG...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCGAGGCAGCATGGTCATaGCCTGTGGGTAGACGACAA +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFEAAWS*PVGRRQ
Trigger: TTGTCGTCTACCCACAGGCCATGACCATGCTGCCTC...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCAGAACACCGCCTTCTTaGGCCGCAGGTAGTATGGGA +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFRTPPS*AAGSMG
Trigger: TCCCATACTACCTGCGGCCCAAGAAGGCGGTGTTCT...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCGCTGGTCAGGAGGCGTaGGTTCAAGTCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPAGQEA*VQVPSA
Trigger: GGCAGAGGGGACTTGAACCCACGCCTCCTGACCAGC...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCCGCTCTGCACAGATCTaGAATGATACTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPRSAQI*NDTPHH
Trigger: ATGATGAGGAGTATCATTCCAGATCTGTGCAGAGCG...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTAGAGCACGTAGGCGATaGTCATGTTGTAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: PEKHPVCVLQLRDQAGVARARRR*SCCSRW
Trigger: CCATCTACTACAACATGATCATCGCCTACGTGCTCT...AGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCAGGGTAGGTCGCTGGTaGGGGAGGCGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPRVGRW*GRRRGR
Trigger: TCTACCTCTTCGCCTCCCTCACCAGCGACCTACCCT...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGTGCCCCCATCAGTGGTaGGGATCAGCCCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKCPHQW*GSAPSG
Trigger: ACCTGATGGGGCTGATCCTCACCACTGATGGGGGCA...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATGCCAGCTGGGATCATaGGGCAGGACAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPCQLGS*GRTAGP
Trigger: TGGGCCTGCTGTCCTGCCTCATGATCCCAGCTGGCA...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCAGGAAGGGTGCACTGCTaGGCCCGCATAGACACCCAG +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPGRVHC*ARIDTQ
Trigger: CTGGGTGTCTATGCGGGCGCAGCAGTGCACCCTTCC...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGTGGCCGGGGCTCAGCTaGCCCGGAGCGCAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEWPGLS*PGAQRA
Trigger: CGCTCTCTGCGCTCCGGGGCAGCTGAGCCCCGGCCA...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGTGCCGATGCCCTGGCTaGCTTGGATGTGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKCRCPG*LGCGGR
Trigger: ACGTCCTCCACATCCAAGGCAGCCAGGGCATCGGCA...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATGGCCAGGCCAGGGCCTaGTTTGGCTACTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHGQARA*FGYLVH
Trigger: GTGGACCAAGTAGCCAAAGCAGGCCCTGGCCTGGCC...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCGCGTGGCCACATACATaGCCGTCCGGTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPAWPHT*PSGSPP
Trigger: TGGAGGAGAACCGGACGGGCATGTATGTGGCCACGC...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCGGCACAGCTGACCTTTaGAGGCTTCTAAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFGTADL*RLLRRD
Trigger: GTCCCTTCTTAGAAGCCTGCAAAGGTCAGCTGTGCC...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCACCAAGGGCTACCCTCTaGCCTCTGCGTCTACCCCCA +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPPRATL*PLRLPP
Trigger: TGGGGGTAGACGCAGAGGGCAGAGGGTAGCCCTTGG...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTCTCCCAGGTGGATTTTaGTGGAATTCTCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: PEKHPVCVLQLRDQAGVALPGGF*WNSPMS
Trigger: TGACATGGGAGAATTCCAGCAAAATCCACCTGGGAG...AGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp CAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTTTCCGTGGAGTGGAGCTaGTGGTTCTCCCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: QRSTLSVEWSCWFSQVDFSVEWS*WFSQVD
Trigger: ATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGA...AAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGAGGTCGACATCGCCCTaGTCACTGGGGGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKRSTSP*SLGVIS
Trigger: GCTGATGACCCCCAGTGACCAGGGCGATGTCGACCT...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGCCTGCTTTGGCTACTTaGTCCACAGGCACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKPALAT*STGTPS
Trigger: GCTGGGCGTGCCTGTGGACCAAGTAGCCAAAGCAGG...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGGCCAGGGCCTGCTTTaGCTACTTGGTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKGQGLL*LLGPQA
Trigger: TGCCTGTGGACCAAGTAGCCAAAGCAGGCCCTGGCC...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCCATCAGCCCGAAGCTaGCGCTGTAGTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: QETPCPEKHPVCVLQLRDPSARS*RCSHPE
Trigger: TTCTGGATGACTACAGCGCCAGCTTCGGGCTGATGG...GTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGCCATGGCCGGCCGGCTaGCCTGTTGGAGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEPWPAG*PVGAAP
Trigger: GGGAGCGGCTCCAACAGGCCAGCCGGCCGGCCATGG...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCAAAGTAGGGCTGAGTTaGATCATTCTCAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: STLAQATGSSFPLCTGLPKVGLS*IILSFE
Trigger: CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTT...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCCCAGCTTTTGCGGCTTaGGGTCCAGTGGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPPAFAA*GPVGEG
Trigger: CCCTTCACCCACTGGACCCCAAGCCGCAAAAGCTGG...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCACTGGAACAAGGTGGGTaGCCTCAGGACCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPLEQGG*PQDQPA
Trigger: GGCTGGCTGGTCCTGAGGCCACCCACCTTGTTCCAG...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGTGCTCCGGATGTACGTaGCAGATACTGTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: SLRCCAAEIHSVRGVELLCSGCT*QILSFL
Trigger: CAAGAATGACAGTATCTGCCACGTACATCCGGAGCA...CAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp GTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGCTGGTTCTCCCAGGTaGATTTTGCTGGAATTCTCC +
Preference number: 4 (lower is better)
Translates to: VGGLPKQETPCPEKHPVCAGSPR*ILLEFS
Trigger: GGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGC...ACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCACAGGCTTGCGGAGGTaGGCTCCCTGGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPTGLRR*APWSFF
Trigger: GAAGAAGCTCCAGGGAGCTCACCTCCGCAAGCCTGT...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCCACAGATGGCCAGCATaGGGAAGTAGGGCACGAGGA +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPHRWPA*GSRARG
Trigger: TCCTCGTGCCCTACTTCCTCATGCTGGCCATCTGTG...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCCCCCACCTAACTCATTaGCCTTTGATCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPPHLTH*PLIPRA
Trigger: GGCCCTGGGGATCAAAGGTCAATGAGTTAGGTGGGG...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGTTGGGGTCCAGTGGGTaGAGGGGTGGTCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKLGSSG*RGGLCL
Trigger: CAGACAAAGACCACCCCTTCACCCACTGGACCCCAA...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCCCCCACTCTCCTCTTTaGGGGACCCACAGTACCAAG +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPPHSPL*GTHSTK
Trigger: CTTGGTACTGTGGGTCCCTCAAAGAGGAGAGTGGGG...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCAGATGAGCAGCATGGCTaGGCCGGCGCCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPDEQHG*AGAFEE
Trigger: CTCTTCAAAGGCGCCGGCGCAGCCATGCTGCTCATC...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATGCCCGCCTGCCTCCTaGCTCACATCATCGACTCCT +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPCPPAS*LTSSTP
Trigger: AGGAGTCGATGATGTGAGGCAGGAGGCAGGCGGGCA...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGAGATGAGAAGGTGGTaGCGGCTGCCCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKEMRRW*RLPHGK
Trigger: TTTCCCATGGGGCAGCCGGCACCACCTTCTCATCTC...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp AAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGTGCCCTTGCGCATGTaGACCATCAGTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KQETPCPEKHPVCVLQLRVPLRM*TISGFG
Trigger: ACCAAAGCCACTGATGGTGCACATGCGCAAGGGCAC...CCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCCATCGCCCTGGTCACTaGGGGTCATCAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPHRPGH*GSSAGL
Trigger: CAGACCTGCTGATGACCCCCAGTGACCAGGGCGATG...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCCTTCAATCCACACCTTaGAAGACAACAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CPEKHPVCVLQLRDQAGVLQSTP*KTTSGG
Trigger: TCCACCACTTGTTGTCTTCCAAGGTGTGGATTGAAG...GACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTCACAGCTGTCACAATaGTCTCCAGAAAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: WGRCVAVPQRSTLSVEWSSQLSQ*SPEKQT
Trigger: AGTTTGCTTTTCTGGAGACCATTGTGACAGCTGTGA...GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGATAGAGATGAGAAGGTaGTGCCGGCTGCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKIEMRR*CRLPHG
Trigger: CCCATGGGGCAGCCGGCACCACCTTCTCATCTCTAT...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCTGTCTCCAACCCTCTTaGTCTCTGCCCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPCLQPS*SLPRQL
Trigger: GAGCTGCCTGGGCAGAGACCAAGAGGGTTGGAGACA...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCACGGCTTGGGGTCCAGTaGGTGAAGGGGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPRLGVQ*VKGWSL
Trigger: CAAAGACCACCCCTTCACCCACTGGACCCCAAGCCG...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCAAGACTTCACACCCTTaGGGATACAGAGGAACACGA +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFKTSHP*GYRGTR
Trigger: TCGTGTTCCTCTGTATCCTCAAGGGTGTGAAGTCTT...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATAGTAGAGGCCCGGCTTaGAGCCCAGCATCATGTGGA +
Preference number: 4 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHSRGPA*SPASCG
Trigger: TCCACATGATGCTGGGCTTCAAGCCGGGCCTCTACT...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATGGGGTGGTCTTTGTCTaGAGTGCTGGGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHGVVFV*SAGASF
Trigger: AAAGGAGGCCCCAGCACTTCAGACAAAGACCACCCC...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGTGCCTTGTCTGTCCCTaGGCAGCGCCCGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFECLVCP*AAPEAG
Trigger: CCCAGCCTCGGGCGCTGCGCAGGGACAGACAAGGCA...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCGGTCTTTGTCTGAAGTaGTGGGGCCTCCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPGLCLK*WGLLSP
Trigger: TGGGGAAAGGAGGCCCCAGCACTTCAGACAAAGACC...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGTGACAGAGGCAGCATaGTCATGGCCTGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKVTEAA*SWPVGR
Trigger: TCTACCCACAGGCCATGACCATGCTGCCTCTGTCAC...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp GCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTAAGACTTCACACCCTTaGGGATACAGAGGAACACGA +
Preference number: 4 (lower is better)
Translates to: AEIHSVRGVELLVLPGGFKTSHP*GYRGTR
Trigger: TCGTGTTCCTCTGTATCCTCAAGGGTGTGAAGTCTT...AAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR TCA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCGAGGGGTGTAGGCCCTaGATAGAGATGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPEGCRP*IEMRRW
Trigger: CCACCTTCTCATCTCTATTCAGGGCCTACACCCCTC...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp AAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGCTACACAGTAGCCAATaGAGGACAGCAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: KQETPCPEKHPVCVLQLRLHSSQ*RTAGSP
Trigger: TGGACTTCCTGCTGTCCTGCATTGGCTACTGTGTAG...CCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR GCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGAGCCCTGACCTTCCCTaGCCAACTCAAGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKSPDLP*PTQDSG
Trigger: ACCAGAATCTTGAGTTGGGCAGGGAAGGTCAGGGCT...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATATCATGCAAATCCCCTaGCCACCCCATCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHIMQIP*PPHHPW
Trigger: CCAGGGATGATGGGGTGGGCAGGGGATTTGCATGAT...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACTCCAGAAAAGCAAACTaGCTATCTAGGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: QETPCPEKHPVCVLQLRDSRKAN*LSRPRV
Trigger: GACTCTCGGCCTAGATAGCCAGTTTGCTTTTCTGGA...GTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCCATCAGCCCGAAGCTaGCGCTGTAGTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHPSARS*RCSHPE
Trigger: TTCTGGATGACTACAGCGCCAGCTTCGGGCTGATGG...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCAAGCCCAGCATCATGTaGATGTCTCGGCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPKPSIM*MSRQNL
Trigger: GAGGTTCTGCCGAGACATCCACATGATGCTGGGCTT...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGATGGTCCCCAGTCCATaGCCGGCCGGCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEMVPSP*PAGWPV
Trigger: AACAGGCCAGCCGGCCGGCCATGGACTGGGGACCAT...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGGGCTCCCAGCCAGCGTaGCCACATACATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEGSQPA*PHTCPS
Trigger: GGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCC...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGCCCGGGCCCATGTCCTaGAACAAGGTGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEPGPMS*NKVGGL
Trigger: GAGGCCACCCACCTTGTTCCAGGACATGGGCCCGGG...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGTCAGCAGGTCTGGGGTaGCAGGCTTGCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFESAGLG*QACGGE
Trigger: CTCACCTCCGCAAGCCTGTCACCCCAGACCTGCTGA...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGCTACACAGTAGCCAATaGAGGACAGCAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKLHSSQ*RTAGSP
Trigger: TGGACTTCCTGCTGTCCTGCATTGGCTACTGTGTAG...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATTCCTTGGAGACTCTGTaGTCCAGGCAGAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHSLETL*SRQSSV
Trigger: CACAGAACTCTGCCTGGAGCACAGAGTCTCCAAGGA...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGGGCCTTCTGCCCGCCTaGCTCCTGCCTCACATCATC +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEGLLPA*LLPHII
Trigger: GATGATGTGAGGCAGGAGGCAGGCGGGCAGAAGGCC...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCTCACAGCTGTCACAATaGTCTCCAGAAAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: GPPPSPMVALSPTMKASFSQLSQ*SPEKQT
Trigger: AGTTTGCTTTTCTGGAGACCATTGTGACAGCTGTGA...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGAGTGGCTTTGGTGACTaGCTCCCAGCCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFESGFGD*LPASVA
Trigger: GGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACT...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGACATGGCCACGCAGATaGGCCCTGAGAACACCGCCT +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFETWPRR*ALRTPP
Trigger: AGGCGGTGTTCTCAGGGCTCATCTGCGTGGCCATGT...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGTCTAAGAAGGGACTGTaGGGTCCCGGGCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFESKKGL*GPGQGL
Trigger: AAGGCCCTGCCCGGGACCTCACAGTCCCTTCTTAGA...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATAGAATGCTGTGTGCATaGGCCATGCTGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHRMLCA*AMLRHF
Trigger: GAAATGCCTCAGCATGGCTCATGCACACAGCATTCT...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGCCCTGTCACCAACAATaGAGGCCAGCTTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEPCHQQ*RPASQQ
Trigger: CTGCTGGGAAGCTGGCCTTCATTGTTGGTGACAGGG...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR TCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGGTGCATGAGCCATGCTaGGGCATTTCTGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEVHEPC*GISAPH
Trigger: GTGGGGTGCAGAAATGCCTCAGCATGGCTCATGCAC...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp AAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGAGATACTGTCATTCTTaGATAGAGAAGACCCCTAGC +
Preference number: 4 (lower is better)
Translates to: KQETPCPEKHPVCVLQLRRYCHS*IEKTPS
Trigger: GCTAGGGGTCTTCTCTATGCAAGAATGACAGTATCT...CCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCCAGAAAAGCAAACTaGCTATCTAGGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPSRKAN*LSRPRV
Trigger: GACTCTCGGCCTAGATAGCCAGTTTGCTTTTCTGGA...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CCA 90 bp TCTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCACTTCAATCCACACCTTaGAAGACAACAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SAQIWNDTPHHANPLPTPLQSTP*KTTSGG
Trigger: TCCACCACTTGTTGTCTTCCAAGGTGTGGATTGAAG...TGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR GCA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGCCGTACTTGCGCATGTaGACCATCAGTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEPYLRM*TISGFG
Trigger: ACCAAAGCCACTGATGGTGCACATGCGCAAGTACGG...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CCA 90 bp GGGGCGGGCACGGACGCAGGCGCTGCCGTCTGGCGGCTGCGGGCGTaGAGCGCGGGCAGGGCGCTGCGAATGCCTTGTCTGTCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: GAGTDAGAAVWRLRA*SAGRALRMPCLSLR
Trigger: GCGCAGGGACAGACAAGGCATTCGCAGCGCCCTGCCCGCGCTCCACGCCCGCAGCCGCCAGACGGCAGCGCCTGCGTCCGTGCCCGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 90 bp CACCGGCTGGGGCGGGCACGGACGCAGGCGCTGCCGTCTGGCGGCTaGGGGCGTGGAGCGCGGGCAGGGCGCTGCGAATGCCTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: HRLGRARTQALPSGG*GRGARAGRCECLVC
Trigger: ACAGACAAGGCATTCGCAGCGCCCTGCCCGCGCTCCACGCCCGCAGCCGCCAGACGGCAGCGCCTGCGTCCGTGCCCGCCCCAGCCGGTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 90 bp CCGGAGCGCAGAGAGCGAGGGCACGAGAGATGGTCCGCTGGCCACTaGGCCTTTGCCCCCGCGGCTCCCGCGCACCGGCTGGGGCGGGCA +
Preference number: 5 (lower is better)
Translates to: PERRERGHERWSAGH*AFAPAAPAHRLGRA
Trigger: TGCCCGCCCCAGCCGGTGCGCGGGAGCCGCGGGGGCAAAGGCGCAGTGGCCAGCGGACCATCTCTCGTGCCCTCGCTCTCTGCGCTCCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 90 bp CAGAGAGCGAGGGCACGAGAGATGGTCCGCTGGCCACTGCGCCTTTaGCCCCGCGGCTCCCGCGCACCGGCTGGGGCGGGCACGGACGCA +
Preference number: 5 (lower is better)
Translates to: QRARAREMVRWPLRL*PRGSRAPAGAGTDA
Trigger: TGCGTCCGTGCCCGCCCCAGCCGGTGCGCGGGAGCCGCGGGGGCAAAGGCGCAGTGGCCAGCGGACCATCTCTCGTGCCCTCGCTCTCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 90 bp AGCTGCCCCGGAGCGCAGAGAGCGAGGGCACGAGAGATGGTCCGCTaGCCACTGCGCCTTTGCCCCCGCGGCTCCCGCGCACCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SCPGAQRARAREMVR*PLRLCPRGSRAPAG
Trigger: CCCAGCCGGTGCGCGGGAGCCGCGGGGGCAAAGGCGCAGTGGCCAGCGGACCATCTCTCGTGCCCTCGCTCTCTGCGCTCCGGGGCAGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS-3UTR CAA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGAGGGGCAGGGCCCCGTaGCCGTCCTTGGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVRGRAP*PSLETL
Trigger: CAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCCT...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CCA 90 bp AGGGCGCTGCGAATGCCTTGTCTGTCCCTGCGCAGCGCCCGAGGCTaGGGAAGGGTGCACTGCTGCGCCCGCATAGACACCCAGACAGAC +
Preference number: 5 (lower is better)
Translates to: RALRMPCLSLRSARG*GRVHCCARIDTQTD
Trigger: GTCTGTCTGGGTGTCTATGCGGGCGCAGCAGTGCACCCTTCCCCAGCCTCGGGCGCTGCGCAGGGACAGACAAGGCATTCGCAGCGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CCA 90 bp CATACATGCCCGTCCGGTTCTCCTCCAGCGATGGTCCCCAGTCCATaGCCGGCCGGCTGGCCTGTTGGAGCCGCTCCCAGAGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: HTCPSGSPPAMVPSP*PAGWPVGAAPRVSP
Trigger: AGGGCTCACTCTGGGAGCGGCTCCAACAGGCCAGCCGGCCGGCCATGGACTGGGGACCATCGCTGGAGGAGAACCGGACGGGCATGTATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS-3UTR CAA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGGATGCCCTGGCTGCCTaGGATGTGGAGGACGTAGCG +
Preference number: 5 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVDALAA*DVEDVA
Trigger: CGCTACGTCCTCCACATCCAAGGCAGCCAGGGCATC...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 90 bp GGCAGAGGTTCCAGCGGATCTCCCCAGGGCTGCCGATGCCCTGGCTaGCTTGGATGTGGAGGACGTAGCGGCTCCAGTACTCCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: GRGSSGSPQGCRCPG*LGCGGRSGSSTPRW
Trigger: CCAGCGAGGAGTACTGGAGCCGCTACGTCCTCCACATCCAAGGCAGCCAGGGCATCGGCAGCCCTGGGGAGATCCGCTGGAACCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS-3UTR CAA 90 bp CAGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGCGCTGCGAATGCCTaGTCTGTCCCTGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: QAGVAALLCRRDPLCPWSGAANA*SVPAQR
Trigger: GCGCTGCGCAGGGACAGACAAGGCATTCGCAGCGCC...ACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCGCCCCGTTGCCGTCCTaGGAGACTCTGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: STLAQATGSSFPLCTGLPAPLPS*ETLCSR
Trigger: CCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGGC...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp GGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGGCCCCGTTGCCGTCCTaGGAGACTCTGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GWGRCVAVPQRSTLSVEWAPLPS*ETLCSR
Trigger: CCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGGC...CCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp AGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGACGGTGCAGGTGAGGTaGAGGGGCAGGGCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: RLGSLRCCAAEIHSVRGVTVQVR*RGRAPL
Trigger: CAACGGGGCCCTGCCCCTCAACCTCACCTGCACCGT...CACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGGCACCATCAGTGGCTTaGGTGACTGGCTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVAPSVA*VTGSQP
Trigger: TGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGC...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 90 bp GCAGGCAGAGGCAGAGGTTCCAGCGGATCTCCCCAGGGCTGCCGATaGCCTGGCTGCCTTGGATGTGGAGGACGTAGCGGCTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: AGRGRGSSGSPQGCR*PGCLGCGGRSGSST
Trigger: AGTACTGGAGCCGCTACGTCCTCCACATCCAAGGCAGCCAGGGCATCGGCAGCCCTGGGGAGATCCGCTGGAACCTCTGCCTCTGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS-3UTR CAA 90 bp GCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTAGGGGCAGGGCCCCGTaGCCGTCCTTGGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: AALLCRRDPLCPWSGAAGRGRAP*PSLETL
Trigger: CAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCCT...ACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCAGGCCAGGGCCTGCTTaGGCTACTTGGTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: STLAQATGSSFPLCTGLPRPGPA*ATWSTG
Trigger: GCCTGTGGACCAAGTAGCCAAAGCAGGCCCTGGCCT...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCCAGCTCTTTCCCACTTaGCACAGGCCTCCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: STLAQATGSSFPLCTGLPQLFPT*HRPPRS
Trigger: GGAGCGGGGAGGCCTGTGCAAAGTGGGAAAGAGCTG...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 90 bp TCAGTGGCTTTGGTGACTGGCTCCCAGCCAGCGTGGCCACATACATaGCCGTCCGGTTCTCCTCCAGCGATGGTCCCCAGTCCATGGCCG +
Preference number: 5 (lower is better)
Translates to: SVALVTGSQPAWPHT*PSGSPPAMVPSPWP
Trigger: CGGCCATGGACTGGGGACCATCGCTGGAGGAGAACCGGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS-3UTR CAA 90 bp TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGGAGCTTCTTCATCTaGGAGAGCGGGTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: WGRCVAVPQRSTLSVEWSWSFFI*ESGWPG
Trigger: CCCCGGCCACCCGCTCTCCAAGATGAAGAAGCTCCA...GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCGCTGCGCCGGCGCCTTaGAAGAGAGGGCTGATTTTC +
Preference number: 5 (lower is better)
Translates to: STLAQATGSSFPLCTGLPAAPAP*KRGLIF
Trigger: GAAAATCAGCCCTCTCTTCAAAGGCGCCGGCGCAGC...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp GGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGGCTGCGCCGGCGCCTTaGAAGAGAGGGCTGATTTTC +
Preference number: 5 (lower is better)
Translates to: GWGRCVAVPQRSTLSVEWAAPAP*KRGLIF
Trigger: GAAAATCAGCCCTCTCTTCAAAGGCGCCGGCGCAGC...CCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp GCCCTCTGCGTCTACCCCCACACCGGGCCCGGGCCCATGTCCTGGAACAAGGTGACCCCACTCTCCTCTTaGAGGGACCCACAGTACCAA +
Preference number: 5 (lower is better)
Translates to: ALCVYPHTGPGPMSWNKVTPLSS*RDPQYQ
Trigger: TTGGTACTGTGGGTCCCTCAAAGAGGAGAGTGGGGT...CACCTTGTTCCAGGACATGGGCCCGGGCCCGGTGTGGGGGTAGACGCAGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp TCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGCTGGGGTCGCTGCGTaGCTGTGCCGCAGAGATCCA +
Preference number: 5 (lower is better)
Translates to: SLRCCAAEIHSVRGVELLAGVAA*LCRRDP
Trigger: TGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGC...CAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp TGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCGGCAGGGTGGGTGGGTaGCCCAAGCAGGAAACACCA +
Preference number: 5 (lower is better)
Translates to: WGRCVAVPQRSTLSVEWSGRVGG*PKQETP
Trigger: TGGTGTTTCCTGCTTGGGCAACCCACCCACCCTGCC...GCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS CCA 90 bp GCATGTGCACCATCAGTGGCTTTGGTGACTGGCTCCCAGCCAGCGTaGCCACATACATGCCCGTCCGGTTCTCCTCCAGCGATGGTCCCC +
Preference number: 5 (lower is better)
Translates to: ACAPSVALVTGSQPA*PHTCPSGSPPAMVP
Trigger: GGGGACCATCGCTGGAGGAGAACCGGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS-3UTR CAA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCGGCGCTGCGAATGCCTaGTCTGTCCCTGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: GPPPSPMVALSPTMKASFGAANA*SVPAQR
Trigger: GCGCTGCGCAGGGACAGACAAGGCATTCGCAGCGCC...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp GCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTGCCTGCTTTGGCTACTaGGTCCACAGGCACGCCCAG +
Preference number: 5 (lower is better)
Translates to: AALLCRRDPLCPWSGAAGACFGY*VHRHAQ
Trigger: CTGGGCGTGCCTGTGGACCAAGTAGCCAAAGCAGGC...ACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp CCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGGACCAGGCTGGGGTCGCTAGGCCAGGGCCTGCTTaGGCTACTTGGTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: PEKHPVCVLQLRDQAGVARPGPA*ATWSTG
Trigger: GCCTGTGGACCAAGTAGCCAAAGCAGGCCCTGGCCT...AGCGACCCCAGCCTGGTCCCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp GCGGCAGGGTGGGTGGGTTGCCCAAGCAGGAAACACCATGCCCTGAGAAGCACCGCACCATCAGTGGCTTaGGTGACTGGCTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: AAGWVGCPSRKHHALRSTAPSVA*VTGSQP
Trigger: TGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGC...GGTGCTTCTCAGGGCATGGTGTTTCCTGCTTGGGCAACCCACCCACCCTGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS GCA 90 bp GCAGGACAGCAGGAAGTCCAGCTTGCCTGTCCAGTTCCCCCGGTGTaGAGCAAAGTCCACATCCAGGTCGACATCGCCCTGGTCACTGGG +
Preference number: 5 (lower is better)
Translates to: AGQQEVQLACPVPPV*SKVHIQVDIALVTG
Trigger: CCCAGTGACCAGGGCGATGTCGACCTGGATGTGGACTTTGCTGCACACCGGGGGAACTGGACAGGCAAGCTGGACTTCCTGCTGTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230671.7
ENST00000513403.1
ENST00000524041.1
CDS GCA 90 bp GTGAGGTTGAGGGGCAGGGCCCCGTTGCCGTCCTTGGAGACTCTGTaGTCCAGGCAGAGTTCTGTGTTCCACCAGTTGCCACAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VRLRGRAPLPSLETL*SRQSSVFHQLPQCS
Trigger: GGAGCACTGTGGCAACTGGTGGAACACAGAACTCTGCCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCCTCAACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 90 bp ATGGCCGTGTTCTCGAAGCTGGTGATGCCCCCGTACTTGCGCATGTaGACCATCAGTGGCTTTGGTGACTGGCTCCCAGCCAGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: MAVFSKLVMPPYLRM*TISGFGDWLPASVA
Trigger: GGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGTACGGGGGCATCACCAGCTTCGAGAACACGGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CCA 90 bp ATGCCCCCGTACTTGCGCATGTGCACCATCAGTGGCTTTGGTGACTaGCTCCCAGCCAGCGTGGCCACATACATGCCCGTCCGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: MPPYLRMCTISGFGD*LPASVATYMPVRFS
Trigger: GGAGAACCGGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGTACGGGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CCA 90 bp GCAGATGTGCCCTTGCGCATGTGCACCATCAGTGGCTTTGGTGACTaGCTCCCAGCCAGCGTGGCCACATACATGCCCGTCCGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ADVPLRMCTISGFGD*LPASVATYMPVRFS
Trigger: GGAGAACCGGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGGGCACATCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp AGCACCCTGGCTCAGGCCACCGGCAGCTCTTTCCCACTTTGCACAGGCCTCCCCTCCCCACCTAACTCATaGACCTTTGATCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: STLAQATGSSFPLCTGLPSPPNS*TFDPQG
Trigger: GCCCTGGGGATCAAAGGTCAATGAGTTAGGTGGGGA...GGGGAGGCCTGTGCAAAGTGGGAAAGAGCTGCCGGTGGCCTGAGCCAGGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS TCA 90 bp CCTAGCAGATGTGCCCTTGCGCATGTGCACCATCAGTGGCTTTGGTaGCTGGCTCCCAGCCAGCGTGGCCACATACATGCCCGTCCGGTT +
Preference number: 5 (lower is better)
Translates to: PSRCALAHVHHQWLW*LAPSQRGHIHARPV
Trigger: AACCGGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGGGCACATCTGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCGCCTGCTTTGGCTACTaGGTCCACAGGCACGCCCAG +
Preference number: 5 (lower is better)
Translates to: GPPPSPMVALSPTMKASFACFGY*VHRHAQ
Trigger: CTGGGCGTGCCTGTGGACCAAGTAGCCAAAGCAGGC...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp AGGCTGGGGTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGCTAGCAGATGTGCCCTaGCGCATGTGCACCATCAGT +
Preference number: 5 (lower is better)
Translates to: RLGSLRCCAAEIHSVRGVLADVP*RMCTIS
Trigger: ACTGATGGTGCACATGCGCAAGGGCACATCTGCTAG...CACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGACCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGACGGTGCAGGTGAGGTaGAGGGGCAGGGCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKTVQVR*RGRAPL
Trigger: CAACGGGGCCCTGCCCCTCAACCTCACCTGCACCGT...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS TCA 90 bp CTGCAATCTCACGGTCCACCTCGATGGCCGTGTTCTCGAAGCTGGTaGTGCCCCCGTACTTGCGCATGTGCACCATCAGTGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LQSHGPPRWPCSRSW*CPRTCACAPSVALV
Trigger: CACCAAAGCCACTGATGGTGCACATGCGCAAGTACGGGGGCATCACCAGCTTCGAGAACACGGCCATCGAGGTGGACCGTGAGATTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 90 bp CCAGGCCTACACAGTAGCCAATGCAGGACAGCAGGAAGTCCAGCTTaGCTGTCCAGTTCCCCCGGTGTGCAGCAAAGTCCACATCCAGGT +
Preference number: 5 (lower is better)
Translates to: PGLHSSQCRTAGSPA*LSSSPGVQQSPHPG
Trigger: ACCTGGATGTGGACTTTGCTGCACACCGGGGGAACTGGACAGGCAAGCTGGACTTCCTGCTGTCCTGCATTGGCTACTGTGTAGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230671.7
ENST00000513403.1
ENST00000524041.1
CDS-3UTR CAA 90 bp CAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGATGCCCTGGCTGCCTaGGATGTGGAGGACGTAGCG +
Preference number: 5 (lower is better)
Translates to: QRSTLSVEWSCWFSQVDFDALAA*DVEDVA
Trigger: CGCTACGTCCTCCACATCCAAGGCAGCCAGGGCATC...AAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCGTGATGCCCCCGTACTaGCGCATGTGCACCATCAGT +
Preference number: 5 (lower is better)
Translates to: GPPPSPMVALSPTMKASFVMPPY*RMCTIS
Trigger: ACTGATGGTGCACATGCGCAAGTACGGGGGCATCAC...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCTGGAGCTTCTTCATCTaGGAGAGCGGGTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPWSFFI*ESGWPG
Trigger: CCCCGGCCACCCGCTCTCCAAGATGAAGAAGCTCCA...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp GCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTGCTTCAATCCACACCTaGGAAGACAACAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: AALLCRRDPLCPWSGAAGASIHT*EDNKWW
Trigger: CCACCACTTGTTGTCTTCCAAGGTGTGGATTGAAGC...ACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp CCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTCCGAGGGCTGGTACTaGACGATGCTATACACCATG +
Preference number: 5 (lower is better)
Translates to: PQRSTLSVEWSCWFSQVDSEGWY*TMLYTM
Trigger: CATGGTGTATAGCATCGTCAAGTACCAGCCCTCGGA...ATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp GTCGCTGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTAGAACTGTGTGCTCCTaGAAGGCAGGACAGCATCTT +
Preference number: 5 (lower is better)
Translates to: VAALLCRRDPLCPWSGAARTVCS*KAGQHL
Trigger: AAGATGCTGTCCTGCCTTCAAGGAGCACACAGTTCT...AGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCAGCGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS CCA 90 bp TCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTTGCTaGAATTCTCCCATGTCATCACCCCACCACCGTCACTTCCTCACC +
Preference number: 5 (lower is better)
Translates to: SVRGVELLVLPGGFC*NSPMSSPHHRHFLT
Trigger: GGTGAGGAAGTGACGGTGGTGGGGTGATGACATGGGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp CTGCACAGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCTACCTCCCCAGCTTTaGCGGCTTGGGGTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LHRSGMILLIMQIPCPPHLPPQL*RLGVQW
Trigger: CCACTGGACCCCAAGCCGCAAAAGCTGGGGAGGTAG...ATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCTGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 90 bp TGCGTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTaGTGGTTCTCCCAGGTGGATTTTGCTGGAATTCTCCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: CVAVPQRSTLSVEWS*WFSQVDFAGILPCH
Trigger: ATGACATGGGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS CCA 90 bp AGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTaGATTTTGCTGGAATTCTCCCATGTCATCACCCCACCACCGTCA +
Preference number: 5 (lower is better)
Translates to: RDPLCPWSGAAGSPR*ILLEFSHVITPPPS
Trigger: TGACGGTGGTGGGGTGATGACATGGGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS CCA 90 bp GTTGCTGTGCCGCAGAGATCCACTCTGTCCGTGGAGTGGAGCTGCTaGTTCTCCCAGGTGGATTTTGCTGGAATTCTCCCATGTCATCAC +
Preference number: 5 (lower is better)
Translates to: VAVPQRSTLSVEWSC*FSQVDFAGILPCHH
Trigger: GTGATGACATGGGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGGATCTCTGCGGCACAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp GGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCCAGCTTCGGATCATTCTCAGCTTaGAGTGGGTCTGAGTATGCC +
Preference number: 5 (lower is better)
Translates to: GPPPSPMVALSPTMKASFGSFSA*SGSEYA
Trigger: GGCATACTCAGACCCACTCAAAGCTGAGAATGATCC...GAAGCTGGCCTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCGTGTCTCCAACCCTCTaGGTCTCTGCCCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPVSPTL*VSAQAA
Trigger: AGCTGCCTGGGCAGAGACCAAGAGGGTTGGAGACAC...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp AAGCAGGAAACACCATGCCCTGAGAAGCACCCCGTGTGTGTCTTACAGCTGAGGATGCTGGTGATGGCGTaGCCCAGAGTGACGATGAAA +
Preference number: 5 (lower is better)
Translates to: KQETPCPEKHPVCVLQLRMLVMA*PRVTMK
Trigger: TTTCATCGTCACTCTGGGCAACGCCATCACCAGCAT...CCTCAGCTGTAAGACACACACGGGGTGCTTCTCAGGGCATGGTGTTTCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCGTGAAGGGGTGGTCTTaGTCTGAAGTGCTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPVKGWS*SEVLGP
Trigger: AGGCCCCAGCACTTCAGACAAAGACCACCCCTTCAC...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 90 bp CATCTTGTCCGTGCTCCGGATGTACGTGGCAGATACTGTCATTCTTaGATAGAGAAGACCCCTAGCAGATGTGCCCTTGCGCATGTGCAC +
Preference number: 5 (lower is better)
Translates to: HLVRAPDVRGRYCHS*IEKTPSRCALAHVH
Trigger: GTGCACATGCGCAAGGGCACATCTGCTAGGGGTCTTCTCTATGCAAGAATGACAGTATCTGCCACGTACATCCGGAGCACGGACAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS TCA 90 bp GGTTTGAAGTCACCTAAGCAAGTTTCTGCAGAACTGTGTGCTCCTTaGAGGCAGGACAGCATCTTGTCCGTGCTCCGGATGTACGTGGCA +
Preference number: 5 (lower is better)
Translates to: GLKSPKQVSAELCAP*RQDSILSVLRMYVA
Trigger: TGCCACGTACATCCGGAGCACGGACAAGATGCTGTCCTGCCTTCAAGGAGCACACAGTTCTGCAGAAACTTGCTTAGGTGACTTCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGAGCAGGAAGTCCAGCTaGCCTGTCCAGTTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: LNMSIRKVGLSWIILSFESRKSS*PVQFPR
Trigger: CCGGGGGAACTGGACAGGCAAGCTGGACTTCCTGCT...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp CATGTGTATGGGCCACCTCCTAGTCCCATGGTTGCCCTGTCACCAACAATGAAGGCTTCAATCCACACCTaGGAAGACAACAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HVYGPPPSPMVALSPTMKASIHT*EDNKWW
Trigger: CCACCACTTGTTGTCTTCCAAGGTGTGGATTGAAGC...CTTCATTGTTGGTGACAGGGCAACCATGGGACTAGGAGGTGGCCCATACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp AGATCTGGAATGATACTCCTCATCATGCAAATCCCCTGCCCACCCCATCATCCCTCCGAGGGCTGGTACTaGACGATGCTATACACCATG +
Preference number: 5 (lower is better)
Translates to: RSGMILLIMQIPCPPHHPSEGWY*TMLYTM
Trigger: CATGGTGTATAGCATCGTCAAGTACCAGCCCTCGGA...GGGATGATGGGGTGGGCAGGGGATTTGCATGATGAGGAGTATCATTCCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 90 bp CTGCAGAACTGTGTGCTCCTTGAAGGCAGGACAGCATCTTGTCCGTaGTCCGGATGTACGTGGCAGATACTGTCATTCTTGCATAGAGAA +
Preference number: 5 (lower is better)
Translates to: LQNCVLLEGRTASCP*SGCTWQILSFLHRE
Trigger: TTCTCTATGCAAGAATGACAGTATCTGCCACGTACATCCGGAGCACGGACAAGATGCTGTCCTGCCTTCAAGGAGCACACAGTTCTGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS-3UTR CAA 90 bp TACAGGAGCCCCCAGGGATCTTTCTCCCCACCTAACTCATTGACCTTTGATCCCAGTTTTCCTTCTGTCTaGAACCCTCCTGTAACCTGG +
Preference number: 5 (lower is better)
Translates to: YRSPQGSFSPPNSLTFDPSFPSV*NPPVTW
Trigger: CCAGGTTACAGGAGGGTTCAAGACAGAAGGAAAACT...GGGATCAAAGGTCAATGAGTTAGGTGGGGAGAAAGATCCCTGGGGGCTCCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS-3UTR CAA 90 bp CTTAATATGTCCATCCGCAAAGTAGGGCTGAGTTGGATCATTCTCAGCTTTGAGATGCTGGTGATGGCGTaGCCCAGAGTGACGATGAAA +
Preference number: 5 (lower is better)
Translates to: LNMSIRKVGLSWIILSFEMLVMA*PRVTMK
Trigger: TTTCATCGTCACTCTGGGCAACGCCATCACCAGCAT...CTCAAAGCTGAGAATGATCCAACTCAGCCCTACTTTGCGGATGGACATATTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 72 bp AGAGAGCGAGGGCACGAGAGATGGTCCGCTGGCCACTaGGCCTTTGCCCCCGCGGCTCCCGCGCACCGGCTG +
Preference number: 6 (lower is better)
Translates to: RERGHERWSAGH*AFAPAAPAHRL
Trigger: CAGCCGGTGCGCGGGAGCCGCGGGGGCAAAGGCGCAGTGGCCAGCGGACCATCTCTCGTGCCCTCGCTCTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp GGAGCGCAGAGAGCGAGGGCACGAGAGATGGTCCGCTaGCCACTGCGCCTTTGCCCCCGCGGCTCCCGCGCA +
Preference number: 6 (lower is better)
Translates to: GAQRARAREMVR*PLRLCPRGSRA
Trigger: TGCGCGGGAGCCGCGGGGGCAAAGGCGCAGTGGCCAGCGGACCATCTCTCGTGCCCTCGCTCTCTGCGCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp GCTGCCCCGGAGCGCAGAGAGCGAGGGCACGAGAGATaGTCCGCTGGCCACTGCGCCTTTGCCCCCGCGGCT +
Preference number: 6 (lower is better)
Translates to: AAPERRERGHER*SAGHCAFAPAA
Trigger: AGCCGCGGGGGCAAAGGCGCAGTGGCCAGCGGACCATCTCTCGTGCCCTCGCTCTCTGCGCTCCGGGGCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 72 bp GCGCGGGCAGGGCGCTGCGAATGCCTTGTCTGTCCCTaGGCAGCGCCCGAGGCTGGGGAAGGGTGCACTGCT +
Preference number: 6 (lower is better)
Translates to: ARAGRCECLVCP*AAPEAGEGCTA
Trigger: AGCAGTGCACCCTTCCCCAGCCTCGGGCGCTGCGCAGGGACAGACAAGGCATTCGCAGCGCCCTGCCCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp CCGTCCGGTTCTCCTCCAGCGATGGTCCCCAGTCCATaGCCGGCCGGCTGGCCTGTTGGAGCCGCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: PSGSPPAMVPSP*PAGWPVGAAPR
Trigger: TCTGGGAGCGGCTCCAACAGGCCAGCCGGCCGGCCATGGACTGGGGACCATCGCTGGAGGAGAACCGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp CCTCCAGCGATGGTCCCCAGTCCATGGCCGGCCGGCTaGCCTGTTGGAGCCGCTCCCAGAGTGAGCCCTCTT +
Preference number: 6 (lower is better)
Translates to: PPAMVPSPWPAG*PVGAAPRVSPL
Trigger: AAGAGGGCTCACTCTGGGAGCGGCTCCAACAGGCCAGCCGGCCGGCCATGGACTGGGGACCATCGCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp CGAATGCCTTGTCTGTCCCTGCGCAGCGCCCGAGGCTaGGGAAGGGTGCACTGCTGCGCCCGCATAGACACC +
Preference number: 6 (lower is better)
Translates to: RMPCLSLRSARG*GRVHCCARIDT
Trigger: GGTGTCTATGCGGGCGCAGCAGTGCACCCTTCCCCAGCCTCGGGCGCTGCGCAGGGACAGACAAGGCATTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CCA 72 bp GCTTGCGGAGGTGAGCTCCCTGGAGCTTCTTCATCTTaGAGAGCGGGTGGCCGGGGCTCAGCTGCCCCGGAG +
Preference number: 6 (lower is better)
Translates to: ACGGELPGASSS*RAGGRGSAAPE
Trigger: CTCCGGGGCAGCTGAGCCCCGGCCACCCGCTCTCCAAGATGAAGAAGCTCCAGGGAGCTCACCTCCGCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230671.7
ENST00000513403.1
ENST00000524041.1
CDS CAA 90 bp GAGGTTCCAGCGGATCTCCCCAGGGCTGCCGATGCCCTGGCTGCCTaGGATGTGGAGGACGTAGCGGCTCCAGTACTCCTCGCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: EVPADLPRAADALAA*DVEDVAAPVLLAGA
Trigger: AGCCCCAGCGAGGAGTACTGGAGCCGCTACGTCCTCCACATCCAAGGCAGCCAGGGCATCGGCAGCCCTGGGGAGATCCGCTGGAACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 72 bp TCCAGCGGATCTCCCCAGGGCTGCCGATGCCCTGGCTaGCTTGGATGTGGAGGACGTAGCGGCTCCAGTACT +
Preference number: 6 (lower is better)
Translates to: SSGSPQGCRCPG*LGCGGRSGSST
Trigger: AGTACTGGAGCCGCTACGTCCTCCACATCCAAGGCAGCCAGGGCATCGGCAGCCCTGGGGAGATCCGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp GACATCGCCCTGGTCACTGGGGGTCATCAGCAGGTCTaGGGTGACAGGCTTGCGGAGGTGAGCTCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: DIALVTGGHQQV*GDRLAEVSSLE
Trigger: CTCCAGGGAGCTCACCTCCGCAAGCCTGTCACCCCAGACCTGCTGATGACCCCCAGTGACCAGGGCGATGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230671.7
ENST00000513403.1
ENST00000524041.1
CDS CCA 72 bp AGGCAGCTCCCTCTGCCCACCGTGCAGGGCGTGGGGTaGCCAGCCTTAGAGAGGGAACCATGTGGGTATCCT +
Preference number: 6 (lower is better)
Translates to: RQLPLPTVQGVG*PALEREPCGYP
Trigger: AGGATACCCACATGGTTCCCTCTCTAAGGCTGGCCACCCCACGCCCTGCACGGTGGGCAGAGGGAGCTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513403.1
CDS CAA 72 bp CTGACGGTGCAGGTGAGGTTGAGGGGCAGGGCCCCGTaGCCGTCCTTGGAGACTCTGTGCTCCAGGCAGAGT +
Preference number: 6 (lower is better)
Translates to: LTVQVRLRGRAP*PSLETLCSRQS
Trigger: ACTCTGCCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCCTCAACCTCACCTGCACCGTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 72 bp TTGGTGACTGGCTCCCAGCCAGCGTGGCCACATACATaGCCGTCCGGTTCTCCTCCAGCGATGGTCCCCAGT +
Preference number: 6 (lower is better)
Translates to: LVTGSQPAWPHT*PSGSPPAMVPS
Trigger: ACTGGGGACCATCGCTGGAGGAGAACCGGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp CCATCAGTGGCTTTGGTGACTGGCTCCCAGCCAGCGTaGCCACATACATGCCCGTCCGGTTCTCCTCCAGCG +
Preference number: 6 (lower is better)
Translates to: PSVALVTGSQPA*PHTCPSGSPPA
Trigger: CGCTGGAGGAGAACCGGACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CAA 90 bp CTGACGGTGCAGGTGAGGTTGAGGGGCAGGGCCCCGTTGCCGTCCTaGGAGACTCTGTGCTCCAGGCAGAGTTCTGTGTTCCACCAGTTG +
Preference number: 6 (lower is better)
Translates to: LTVQVRLRGRAPLPS*ETLCSRQSSVFHQL
Trigger: CAACTGGTGGAACACAGAACTCTGCCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCCTCAACCTCACCTGCACCGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 72 bp AGGGGCAGGGCCCCGTTGCCGTCCTTGGAGACTCTGTaGTCCAGGCAGAGTTCTGTGTTCCACCAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: RGRAPLPSLETL*SRQSSVFHQLP
Trigger: TGGCAACTGGTGGAACACAGAACTCTGCCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp CCCTTGCGCATGTGCACCATCAGTGGCTTTGGTGACTaGCTCCCAGCCAGCGTGGCCACATACATGCCCGTC +
Preference number: 6 (lower is better)
Translates to: PLRMCTISGFGD*LPASVATYMPV
Trigger: GACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS CAA 72 bp CAGGTGAGGTTGAGGGGCAGGGCCCCGTTGCCGTCCTaGGAGACTCTGTGCTCCAGGCAGAGTTCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: QVRLRGRAPLPS*ETLCSRQSSVF
Trigger: GAACACAGAACTCTGCCTGGAGCACAGAGTCTCCAAGGACGGCAACGGGGCCCTGCCCCTCAACCTCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CAA 90 bp TCCACCTCGATGGCCGTGTTCTCGAAGCTGGTGATGCCCCCGTACTaGCGCATGTGCACCATCAGTGGCTTTGGTGACTGGCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: STSMAVFSKLVMPPY*RMCTISGFGDWLPA
Trigger: GGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGTACGGGGGCATCACCAGCTTCGAGAACACGGCCATCGAGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS TCA 72 bp ACCAGTTGCCACAGTGCTCCCAGGGTAGGTCGCTGGTaGGGGAGGCGAAGAGGTAGAAGAGCACGTAGGCGA +
Preference number: 6 (lower is better)
Translates to: TSCHSAPRVGRW*GRRRGRRARRR
Trigger: TCGCCTACGTGCTCTTCTACCTCTTCGCCTCCCTCACCAGCGACCTACCCTGGGAGCACTGTGGCAACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS TCA 72 bp CAGCCCCATCAGGTACATGGCCACGCAGATGAGCCCTaGGAACACCGCCTTCTTGGGCCGCAGGTAGTATGG +
Preference number: 6 (lower is better)
Translates to: QPHQVHGHADEP*EHRLLGPQVVW
Trigger: CCATACTACCTGCGGCCCAAGAAGGCGGTGTTCTCAGGGCTCATCTGCGTGGCCATGTACCTGATGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS TCA 72 bp CACGGTCCACCTCGATGGCCGTGTTCTCGAAGCTGGTaGTGCCCCCGTACTTGCGCATGTGCACCATCAGTG +
Preference number: 6 (lower is better)
Translates to: HGPPRWPCSRSW*CPRTCACAPSV
Trigger: CACTGATGGTGCACATGCGCAAGTACGGGGGCATCACCAGCTTCGAGAACACGGCCATCGAGGTGGACCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS GCA 72 bp CAGGAAGTCCAGCTTGCCTGTCCAGTTCCCCCGGTGTaGAGCAAAGTCCACATCCAGGTCGACATCGCCCTG +
Preference number: 6 (lower is better)
Translates to: QEVQLACPVPPV*SKVHIQVDIAL
Trigger: CAGGGCGATGTCGACCTGGATGTGGACTTTGCTGCACACCGGGGGAACTGGACAGGCAAGCTGGACTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230671.7
ENST00000513403.1
ENST00000524041.1
CDS GCA 72 bp TCCAGGCAGAGTTCTGTGTTCCACCAGTTGCCACAGTaGTCCCAGGGTAGGTCGCTGGTGAGGGAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: SRQSSVFHQLPQ*SQGRSLVREAK
Trigger: CTTCGCCTCCCTCACCAGCGACCTACCCTGGGAGCACTGTGGCAACTGGTGGAACACAGAACTCTGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp GCCCTCTTCTCGAAGCACAGCCACCAGCATGCCAGCTaGGATCATGAGGCAGGACAGCAGGCCCATCAGGAT +
Preference number: 6 (lower is better)
Translates to: ALFSKHSHQHAS*DHEAGQQAHQD
Trigger: ATCCTGATGGGCCTGCTGTCCTGCCTCATGATCCCAGCTGGCATGCTGGTGGCTGTGCTTCGAGAAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS CCA 72 bp CCCTCCGACAGGACCTCAGGCCCATACCTCCTCCATTaGTGTACGCTCGATAGGGGAAGCGCCAGACATTCC +
Preference number: 6 (lower is better)
Translates to: PSDRTSGPYLLH*CTLDRGSARHS
Trigger: GGAATGTCTGGCGCTTCCCCTATCGAGCGTACACCAATGGAGGAGGTATGGGCCTGAGGTCCTGTCGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513403.1
CDS CAA 72 bp TGCCCCCGTACTTGCGCATGTGCACCATCAGTGGCTTaGGTGACTGGCTCCCAGCCAGCGTGGCCACATACA +
Preference number: 6 (lower is better)
Translates to: CPRTCACAPSVA*VTGSQPAWPHT
Trigger: TGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGTACGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CAA 90 bp TCCTTGGAGACTCTGTGCTCCAGGCAGAGTTCTGTGTTCCACCAGTaGCCACAGTGCTCCCAGGGTAGGTCGCTGGTGAGGGAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: SLETLCSRQSSVFHQ*PQCSQGRSLVREAK
Trigger: CTTCGCCTCCCTCACCAGCGACCTACCCTGGGAGCACTGTGGCAACTGGTGGAACACAGAACTCTGCCTGGAGCACAGAGTCTCCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230671.7
ENST00000524041.1
CDS GCA 72 bp TTCTCGAAGCTGGTGATGCCCCCGTACTTGCGCATGTaGACCATCAGTGGCTTTGGTGACTGGCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: FSKLVMPPYLRM*TISGFGDWLPA
Trigger: GGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGTACGGGGGCATCACCAGCTTCGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CCA 72 bp TGTGCAGCAAAGTCCACATCCAGGTCGACATCGCCCTaGTCACTGGGGGTCATCAGCAGGTCTGGGGTGACA +
Preference number: 6 (lower is better)
Translates to: CAAKSTSRSTSP*SLGVISRSGVT
Trigger: TGTCACCCCAGACCTGCTGATGACCCCCAGTGACCAGGGCGATGTCGACCTGGATGTGGACTTTGCTGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230671.7
ENST00000513403.1
ENST00000524041.1
CDS CCA 72 bp TACTTGCGCATGTGCACCATCAGTGGCTTTGGTGACTaGCTCCCAGCCAGCGTGGCCACATACATGCCCGTC +
Preference number: 6 (lower is better)
Translates to: YLRMCTISGFGD*LPASVATYMPV
Trigger: GACGGGCATGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CAA 72 bp CAGATGTGCCCTTGCGCATGTGCACCATCAGTGGCTTaGGTGACTGGCTCCCAGCCAGCGTGGCCACATACA +
Preference number: 6 (lower is better)
Translates to: QMCPCACAPSVA*VTGSQPAWPHT
Trigger: TGTATGTGGCCACGCTGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGGGCACATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS TCA 72 bp ATGAGTTCTGCCCAAGGTCGCCTAGGAGACAGTGGCTaGGGCCACCTAAAAGCTCACTGTACCCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: MSSAQGRLGDSG*GHLKAHCTPGP
Trigger: AGGCCCTGGGGTACAGTGAGCTTTTAGGTGGCCTCAGCCACTGTCTCCTAGGCGACCTTGGGCAGAACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513403.1
CDS GCA 72 bp CACAGTAGCCAATGCAGGACAGCAGGAAGTCCAGCTTaGCTGTCCAGTTCCCCCGGTGTGCAGCAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: HSSQCRTAGSPA*LSSSPGVQQSP
Trigger: TGGACTTTGCTGCACACCGGGGGAACTGGACAGGCAAGCTGGACTTCCTGCTGTCCTGCATTGGCTACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230671.7
ENST00000513403.1
ENST00000524041.1
CDS CAA 72 bp ATGGCCGTGTTCTCGAAGCTGGTGATGCCCCCGTACTaGCGCATGTGCACCATCAGTGGCTTTGGTGACTGG +
Preference number: 6 (lower is better)
Translates to: MAVFSKLVMPPY*RMCTISGFGDW
Trigger: CCAGTCACCAAAGCCACTGATGGTGCACATGCGCAAGTACGGGGGCATCACCAGCTTCGAGAACACGGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230671.7
CDS CAA 72 bp CCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTaGCTGGAATTCTCCCATGTCATCACCCCACCACCG +
Preference number: 6 (lower is better)
Translates to: PWSGAAGSPRWI*LEFSHVITPPP
Trigger: CGGTGGTGGGGTGATGACATGGGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS CAA 90 bp CCACTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTGGATTTaGCTGGAATTCTCCCATGTCATCACCCCACCACCGTCACTTCCT +
Preference number: 6 (lower is better)
Translates to: PLCPWSGAAGSPRWI*LEFSHVITPPPSLP
Trigger: AGGAAGTGACGGTGGTGGGGTGATGACATGGGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS CCA 72 bp CTCTGTCCGTGGAGTGGAGCTGCTGGTTCTCCCAGGTaGATTTTGCTGGAATTCTCCCATGTCATCACCCCA +
Preference number: 6 (lower is better)
Translates to: LCPWSGAAGSPR*ILLEFSHVITP
Trigger: TGGGGTGATGACATGGGAGAATTCCAGCAAAATCCACCTGGGAGAACCAGCAGCTCCACTCCACGGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS CCA 72 bp GGCAGGACAGCATCTTGTCCGTGCTCCGGATGTACGTaGCAGATACTGTCATTCTTGCATAGAGAAGACCCC +
Preference number: 6 (lower is better)
Translates to: GRTASCPCSGCT*QILSFLHREDP
Trigger: GGGGTCTTCTCTATGCAAGAATGACAGTATCTGCCACGTACATCCGGAGCACGGACAAGATGCTGTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS TCA 72 bp TCACCTAAGCAAGTTTCTGCAGAACTGTGTGCTCCTTaGAGGCAGGACAGCATCTTGTCCGTGCTCCGGATG +
Preference number: 6 (lower is better)
Translates to: SPKQVSAELCAP*RQDSILSVLRM
Trigger: CATCCGGAGCACGGACAAGATGCTGTCCTGCCTTCAAGGAGCACACAGTTCTGCAGAAACTTGCTTAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1
CDS GCA 72 bp TGTGTGCTCCTTGAAGGCAGGACAGCATCTTGTCCGTaGTCCGGATGTACGTGGCAGATACTGTCATTCTTG +
Preference number: 6 (lower is better)
Translates to: CVLLEGRTASCP*SGCTWQILSFL
Trigger: CAAGAATGACAGTATCTGCCACGTACATCCGGAGCACGGACAAGATGCTGTCCTGCCTTCAAGGAGCACACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524041.1