RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A6 (Homo sapiens)

Ensembl gene IDs: ENSG00000131389

Ensembl transcript IDs: ENST00000610642.4, ENST00000613060.4, ENST00000613930.4, ENST00000615188.1, ENST00000618278.4, ENST00000621751.4, ENST00000622176.4, ENST00000622186.4, ENST00000622186.5, ENST00000622810.4, ENST00000649500.1

Found 1033 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATGCTGTCCTGGAAGGAGAGCATCCAAGGCCACTTCCTGCTGCCTaGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGGGCG +
Preference number: 1 (lower is better)
Translates to: YAVLEGEHPRPLPAA*KLPAEPRGQSGARA
Trigger: CGCCCTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTTGGATGCTCTCCTTCCAGGACAGCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 90 bp GGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCCACTTCCTGCTaGCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: GLCCPGRRASKATSC*LETPRRASGSVWSQ
Trigger: CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTTGGATGCTCTCCTTCCAGGACAGCATAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 90 bp GGGATCCAGGGGGCAGTGAAGGAGCTGCACATGGCCCAGGGGTTATaGTGTCCTGGAAGGAGAGCATCCAAGGCCACTTCCTGCTGCCTG +
Preference number: 1 (lower is better)
Translates to: GIQGAVKELHMAQGL*CPGRRASKATSCCL
Trigger: CAGGCAGCAGGAAGTGGCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACTGCCCCCTGGATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 90 bp GTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTaGCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCAGTGG +
Preference number: 1 (lower is better)
Translates to: VPLPPLARLSCEPHS*QPSWISSSSLSGQW
Trigger: CCACTGGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 90 bp TACACAGGTACTCGCAGAGCTATGCTCTGCACACAGAGCCAGGGCTaGCTGGGCGAGAGGGCTCTGATTGGAGACAGGTGCCTTGGGGAG +
Preference number: 1 (lower is better)
Translates to: YTGTRRAMLCTQSQG*LGERALIGDRCLGE
Trigger: CTCCCCAAGGCACCTGTCTCCAATCAGAGCCCTCTCGCCCAGCCAGCCCTGGCTCTGTGTGCAGAGCATAGCTCTGCGAGTACCTGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 90 bp GGGGGCAGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTaGAAGGAGAGCATCCAAGGCCACTTCCTGCTGCCTGGAAACTCC +
Preference number: 1 (lower is better)
Translates to: GGSEGAAHGPGVMLS*KESIQGHFLLPGNS
Trigger: GGAGTTTCCAGGCAGCAGGAAGTGGCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 90 bp ACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTaGAATGACCACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCC +
Preference number: 1 (lower is better)
Translates to: TVAFHPGSPRWGDGN*NDHKCPGSHCVPSP
Trigger: GGGACTTGGCACGCAGTGGCTACCTGGGCATTTGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 90 bp GTATTTACCGTGTCCCAGGCAGCCTGGCCTGGGACCACATGGGTCTaGGGGAGGGATGGGACCTCAGGCCACCTTGAAGGATTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: VFTVSQAAWPGTTWV*GRDGTSGHLEGFSL
Trigger: AAGAGAAAATCCTTCAAGGTGGCCTGAGGTCCCATCCCTCCCTCAGACCCATGTGGTCCCAGGCCAGGCTGCCTGGGACACGGTAAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 90 bp GCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTaGAGGATACAGACTCAAAAGCTGTTCTTGGTGTGCCTTGCTAGG +
Preference number: 1 (lower is better)
Translates to: APRAALVLNWEHFPQ*RIQTQKLFLVCLAR
Trigger: CCTAGCAAGGCACACCAAGAACAGCTTTTGAGTCTGTATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 90 bp GCGGGGCCTGGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTaGTCTGAGAATCTTATAAGAAGAGGCCTTCCTCAGGCCATGTCC +
Preference number: 1 (lower is better)
Translates to: AGPGDLVCLCLWSRI*SENLIRRGLPQAMS
Trigger: GGACATGGCCTGAGGAAGGCCTCTTCTTATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 90 bp GGGAGAGTTGAGGAACGACTTCCTTCCAGGCGGGGCCTGGGGACTTaGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTA +
Preference number: 1 (lower is better)
Translates to: GRVEERLPSRRGLGT*SACVFGLEFGLRIL
Trigger: TAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCGCCTGGAAGGAAGTCGTTCCTCAACTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 90 bp CACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTaGGGATTTGAAAGGTATAGTACCTTCTCTCCTGGTTCAGAGACA +
Preference number: 1 (lower is better)
Translates to: HSLGPNRGWVGVCLP*GFERYSTFSPGSET
Trigger: TGTCTCTGAACCAGGAGAGAAGGTACTATACCTTTCAAATCCCCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 90 bp TGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTaGAGGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCAT +
Preference number: 1 (lower is better)
Translates to: CAGISISDPSQAESR*RTLPILYRQVDQSH
Trigger: ATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 90 bp GGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTaGCCCTTGGGAGGGGGACACCAAAGGCATACTCCTCCTCCCAAA +
Preference number: 1 (lower is better)
Translates to: GNSEICMPAKDGVQN*PLGGGHQRHTPPPK
Trigger: TTTGGGAGGAGGAGTATGCCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 90 bp TATAAGAAGAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTaGCTACCAACCCAAAATACTGTGGCCTTTCACCCAGGGAGCCCC +
Preference number: 1 (lower is better)
Translates to: YKKRPSSGHVQNVAI*LPTQNTVAFHPGSP
Trigger: GGGGCTCCCTGGGTGAAAGGCCACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTCTTCTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 90 bp CCAAGTTTAATGAGGTATCTCCTCACAGCCCTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGTCCTCTCTCCTGCTATTTCTTCCAT +
Preference number: 1 (lower is better)
Translates to: PSLMRYLLTALLSSP*VCQLMGPLSCYFFH
Trigger: ATGGAAGAAATAGCAGGAGAGAGGACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAGGGCTGTGAGGAGATACCTCATTAAACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 90 bp CAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCTaGCCTCAATCATTGACAGTGGTTAGTTTACTAAAGTTATATAAG +
Preference number: 1 (lower is better)
Translates to: QVATACQVPSSPRAT*PQSLTVVSLLKLYK
Trigger: CTTATATAACTTTAGTAAACTAACCACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 90 bp CACCTCACACCTTTAGCACCAGGAGGATCTTCAGTGTGGCTACAGTaGGATTATTTGTGTAGTCTAGGTAGGGAGGGCCTACTGTTCAAC +
Preference number: 1 (lower is better)
Translates to: HLTPLAPGGSSVWLQ*DYLCSLGREGLLFN
Trigger: GTTGAACAGTAGGCCCTCCCTACCTAGACTACACAAATAATCTCACTGTAGCCACACTGAAGATCCTCCTGGTGCTAAAGGTGTGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610642.4
3UTR TCA 90 bp CAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCAGTGGTTCTaGCGGTCTACTGACTATCCACTCACCATCTCAAAATTAAAAGTG +
Preference number: 1 (lower is better)
Translates to: QPSWISSSSLSGQWF*RSTDYPLTISKLKV
Trigger: CACTTTTAATTTTGAGATGGTGAGTGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 90 bp TCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTTaGCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCAT +
Preference number: 1 (lower is better)
Translates to: SAFLTHPKQKAGEGL*PFSIDRWTRVMSSH
Trigger: ATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 90 bp ACAGGTATGTCATGCTTCATTCCTGCAGGCAACTTTAAGAGATGCTaGGATGTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATT +
Preference number: 1 (lower is better)
Translates to: TGMSCFIPAGNFKRC*DVAWGMTRTCYDPI
Trigger: AATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCATCTCTTAAAGTTGCCTGCAGGAATGAAGCATGACATACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 90 bp GGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTaGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTTTA +
Preference number: 1 (lower is better)
Translates to: GPPHSASASLLYVKG*FIPLASLFFTKPSL
Trigger: TAAACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 90 bp CATGAGCTCTCATGGAAAGTTTCGTTTATACGGAGACATGAAGGTTaGGCATTATTACACAGGTACTCGCAGAGCTATGCTCTGCACACA +
Preference number: 1 (lower is better)
Translates to: HELSWKVSFIRRHEG*ALLHRYSQSYALHT
Trigger: TGTGTGCAGAGCATAGCTCTGCGAGTACCTGTGTAATAATGCTCAACCTTCATGTCTCCGTATAAACGAAACTTTCCATGAGAGCTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 90 bp TTTTGCTTCTGGTACAAGTTTCTACTGCTCTTAGAATCAGACTTCTaGTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGT +
Preference number: 1 (lower is better)
Translates to: FCFWYKFLLLLESDF*YRASSFSFSQSPLC
Trigger: ACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAAGAGCAGTAGAAACTTGTACCAGAAGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGGCCTCGGGGTCAGTCTaGAGCCAGGGCGACTTCATC +
Preference number: 2 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWASGSV*SQGDFI
Trigger: GATGAAGTCGCCCTGGCTCCAGACTGACCCCGAGGC...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGGGCCAGGCCAGGACCTaGCTCAGCCACATCAGCAAT +
Preference number: 2 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWGQART*LSHISN
Trigger: ATTGCTGATGTGGCTGAGTCAGGTCCTGGCCTGGCC...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGGACACCGGGCCCATCTaGATGCCTGGGGCCTATATC +
Preference number: 2 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWDTGPI*MPGAYI
Trigger: GATATAGGCCCCAGGCATGCAGATGGGCCCGGTGTC...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGGACACCGGGCCCATCTaGATGCCTGGGGCCTATATC +
Preference number: 2 (lower is better)
Translates to: TSCCLETPRRASGSVWSQDTGPI*MPGAYI
Trigger: GATATAGGCCCCAGGCATGCAGATGGGCCCGGTGTC...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCGGGCTGGAGGGGCCATaGTGTGCTCTCCCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLGLEGP*CALPLC
Trigger: ACACAAGGGGAGAGCACAGCATGGCCCCTCCAGCCC...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCCCACAGCCCAGCGGTTaGGTTCCCTTGGGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: TNAQVATACQVPSSPRATPQPSG*VPLGSA
Trigger: TGCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGG...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCTGTGCTGGGAGATGCTaGCTGGGTGGGGGACCAGTG +
Preference number: 2 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLCAGRC*LGGGPV
Trigger: CACTGGTCCCCCACCCAGCCAGCATCTCCCAGCACA...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGGACACCGGGCCCATCTaGATGCCTGGGGCCTATATC +
Preference number: 2 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWDTGPI*MPGAYI
Trigger: GATATAGGCCCCAGGCATGCAGATGGGCCCGGTGTC...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCTCCAGCCCAGCCCAATaGCCCAGTTGGGGTACACGT +
Preference number: 2 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCSSPAQ*PSWGTR
Trigger: ACGTGTACCCCAACTGGGCCATTGGGCTGGGCTGGA...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGCGAGAGCGCCGTTCATaGCGGTGCGAGAGTTGTAAG +
Preference number: 2 (lower is better)
Translates to: GDEERKHPSPTPGPSACLRERRS*RCESCK
Trigger: CTTACAACTCTCGCACCGTCATGAACGGCGCTCTCG...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGCACCTCTTGCGAGGCTaGGTTGTGAGCCTCACTCCT +
Preference number: 2 (lower is better)
Translates to: GDEERKHPSPTPGPSACLHLLRG*VVSLTP
Trigger: AGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTG...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACAGGGCTGCCCTTGTTCTaGACTGGGAGCACTTCCCCC +
Preference number: 2 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTGLPLF*TGSTSP
Trigger: GGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCC...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGTCTTCCCCCTGGGTCTaGCAGCTAATGGGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: GDEERKHPSPTPGPSACLSSPWV*QLMGPL
Trigger: GAGAGGACCCATTAGCTGGCAGACCCAGGGGGAAGA...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCCGGGCCCATCTGCATaGCTGGGGCCTATATCCTTT +
Preference number: 2 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCPGPSA*LGPISF
Trigger: AAAGGATATAGGCCCCAGGCATGCAGATGGGCCCGG...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCGTCAGCACCACGGGCTaGCCTTGTTCTGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: TNAQVATACQVPSSPRATVSTTG*PCSELG
Trigger: TCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGAC...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTCCAGATCTGGCTGGCTaGGCTATGTGCGGGCATCAG +
Preference number: 2 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPPDLAG*AMCGHQ
Trigger: CTGATGCCCGCACATAGCCCAGCCAGCCAGATCTGG...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGTCTGGCCAGTGGTTCTaGCGGTCTACTGACTATCCA +
Preference number: 2 (lower is better)
Translates to: TSCCLETPRRASGSVWSQSGQWF*RSTDYP
Trigger: TGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGA...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGGGCTGCCCTTGTTCTaGACTGGGAGCACTTCCCCC +
Preference number: 2 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLGLPLF*TGSTSP
Trigger: GGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCC...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCTGCCTTGGGGAGAGTTaGGGAACGACTTCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLCLGES*GTTSFQ
Trigger: CTGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCA...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGTGTGAGCCTCACTCCTaGCAGCCTTCTTGGATCTCT +
Preference number: 2 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWCEPHS*QPSWIS
Trigger: AGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACA...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCGCAGCACCAGGAGCATaGCGAATGGAAAAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: TNAQVATACQVPSSPRATAAPGA*RMEKWL
Trigger: CAGCCACTTTTCCATTCGCCATGCTCCTGGTGCTGC...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGCTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGT +
Preference number: 2 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWLLSSP*VCQLMG
Trigger: ACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAG...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGGTCCAAATAGGGGCTaGGTGGGGGTGTGTCTGCCC +
Preference number: 2 (lower is better)
Translates to: IWLAGLCAGISISDPSQAGPNRG*VGVCLP
Trigger: GGGCAGACACACCCCCACCCAGCCCCTATTTGGACC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGCAACCCAAAATACTGTaGCCTTTCACCCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TSCCLETPRRASGSVWSQQPKIL*PFTQGA
Trigger: GGCTCCCTGGGTGAAAGGCCACAGTATTTTGGGTTG...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCTCTGTGGCCCTAGCATaGCCCATCTCAACGCAGTGT +
Preference number: 2 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLSVALA*PISTQC
Trigger: ACACTGCGTTGAGATGGGCCATGCTAGGGCCACAGA...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCTGTGAGCCTCACTCCTaGCAGCCTTCTTGGATCTCT +
Preference number: 2 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCCEPHS*QPSWIS
Trigger: AGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACA...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGCGCAGAGCTATGCTCTaGACACAGAGCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWRRAML*TQSQGW
Trigger: CCAGCCCTGGCTCTGTGTGCAGAGCATAGCTCTGCG...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGGGAAAGGGGGAGGGCTaGCCCCTGCTTTCTGGACTG +
Preference number: 2 (lower is better)
Translates to: VRHSPFPAPTSENLQLELGKGEG*PLLSGL
Trigger: CAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCTTTCC...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCGTCAATCCACACCTGTaGGTCCTCAAGGCGGGTGAT +
Preference number: 2 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAVNPHL*VLKAGD
Trigger: ATCACCCGCCTTGAGGACCCACAGGTGTGGATTGAC...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTTCCTGCCAGCCTTCTTaGATCTCTAGCAGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPSCQPS*ISSSSL
Trigger: GAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGA...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCTCTTTAATGAGGGCTTaGCAGGAGTCTCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLSLMRA*QESPRL
Trigger: CAGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGA...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCTGGAGACAGGTGCCTTaGGGAGAGTTGAGGAACGAC +
Preference number: 2 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGWRQVP*GELRND
Trigger: GTCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCA...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTCTTCCTTTCCAGATCTaGCTGGCTGGGCTATGTGCG +
Preference number: 2 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPLPFQI*LAGLCA
Trigger: CGCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAG...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCTCACCAAGGGCTGCTaGGAGGAAGGAGGGCCCCGT +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTLTKGC*EEGGPR
Trigger: ACGGGGCCCTCCTTCCTCCCAGCAGCCCTTGGTGAG...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCTGCGAGGCTGAGTTGTaGGCCTCACTCCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCCEAEL*ASLLPA
Trigger: GGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCA...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCCTCACAGTGCCTCCCTaGGCCTCAGTTACCTCATTT +
Preference number: 2 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGLTVPP*ASVTSF
Trigger: AAATGAGGTAACTGAGGCTCAGGGAGGCACTGTGAG...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCTGGACAGAACTTTCTaGCAGCTACACAGCACCGAA +
Preference number: 2 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCLDRTF*QLHSTE
Trigger: TTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAG...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGCCCCTCTTCCCCACGTaGCACCTGCCCTCAATCATT +
Preference number: 2 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMPLFPT*HLPSII
Trigger: AATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGG...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCCCTGGGGACTTGGTCTaGCTGTGTCTTTGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGPGDLV*LCLWSR
Trigger: TCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGG...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGGGGGCCTATATCCTTTaGTCCACTCACCTCCCCACC +
Preference number: 2 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWGAYIL*STHLPT
Trigger: GGTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCC...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGGGGGCCTATATCCTTTaGTCCACTCACCTCCCCACC +
Preference number: 2 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMGAYIL*STHLPT
Trigger: GGTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCC...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGGGGCCTATATCCTTTaGTCCACTCACCTCCCCACC +
Preference number: 2 (lower is better)
Translates to: IWLAGLCAGISISDPSQAGAYIL*STHLPT
Trigger: GGTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCTGTGCTGGGAGATGCTaGCTGGGTGGGGGACCAGTG +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTCAGRC*LGGGPV
Trigger: CACTGGTCCCCCACCCAGCCAGCATCTCCCAGCACA...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 90 bp TCCCCCAGTGGAGGATACAGACTCAAAAGCTGTTCTTGGTGTGCCTaGCTAGGTGCCAGGGCAGCCCAGGGTGGCATCTTTAATGAGGGC +
Preference number: 2 (lower is better)
Translates to: SPSGGYRLKSCSWCA*LGARAAQGGIFNEG
Trigger: GCCCTCATTAAAGATGCCACCCTGGGCTGCCCTGGCACCTAGCAAGGCACACCAAGAACAGCTTTTGAGTCTGTATCCTCCACTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGATACAGATAGAACTTaGTGCCTGCGCCCGCGCCCG +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGDTDRT*CLRPRP
Trigger: CGGGCGCGGGCGCAGGCATCAAGTTCTATCTGTATC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR TCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCATGCGAGGCTGAGTTGTaGGCCTCACTCCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSACEAEL*ASLLPA
Trigger: GGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCA...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTATGCCTTGGGGAGAGTTaGGGAACGACTTCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLCLGES*GTTSFQ
Trigger: CTGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCA...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGCGGAGACATGAAGGTTaGGCATTATTACACAGGTAC +
Preference number: 2 (lower is better)
Translates to: TSCCLETPRRASGSVWSQRRHEG*ALLHRY
Trigger: GTACCTGTGTAATAATGCTCAACCTTCATGTCTCCG...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAGTGGCGGTACCCGGGTaGTACAAGAGTGCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRVAVPG*YKSALK
Trigger: CTTCAGGGCACTCTTGTATCACCCGGGTACCGCCAC...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGGGACCACATGGGTCTaGGGGAGGGATGGGACCTCA +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAGTTWV*GRDGTS
Trigger: TGAGGTCCCATCCCTCCCTCAGACCCATGTGGTCCC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGGGAATGACCAGAACCTaGTATGACCCCATTCAAATG +
Preference number: 2 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWGMTRT*YDPIQM
Trigger: CATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCC...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGCCTCGAGGCAGTGACTaGCTTTGTGCGTGGTCACGT +
Preference number: 2 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQPRGSD*LCAWSR
Trigger: ACGTGACCACGCACAAAGGCAGTCACTGCCTCGAGG...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAAAATTCTGCGGTCTaGACCCCTCGAGGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLENSAV*TPRGSD
Trigger: GTCACTGCCTCGAGGGGTGCAGACCGCAGAATTTTC...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTATCCCCACGTGCCACCTaGCCTCAATCATTGACAGTG +
Preference number: 2 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLSPRAT*PQSLTV
Trigger: CACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGA...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGCCCTCCCCTCTTCCCCACGTaGCACCTGCCCTCAATCATT +
Preference number: 2 (lower is better)
Translates to: LSYLIYNKGVGLGDPGGPPLFPT*HLPSII
Trigger: AATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGG...AGGGCCTCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGACAGGTAGCCACTGCGTaGCAAGTCCCCTCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGQVATA*QVPSSP
Trigger: TGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTG...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGACAGGTAGCCACTGCGTaGCAAGTCCCCTCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRQVATA*QVPSSP
Trigger: TGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTG...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGT +
Preference number: 2 (lower is better)
Translates to: SEGAAHGPGVMLSWKESILLSSP*VCQLMG
Trigger: ACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAG...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGTCCTGCCAGCCTTCTTaGATCTCTAGCAGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWSCQPS*ISSSSL
Trigger: GAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGA...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTGAGCACTTCCCCCAGTaGAGGATACAGACTCAAAAG +
Preference number: 2 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPEHFPQ*RIQTQK
Trigger: CTTTTGAGTCTGTATCCTCCACTGGGGGAAGTGCTC...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGGCCCTTGTTCTGAACTaGGAGCACTTCCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: VRHSPFPAPTSENLQLELALVLN*EHFPQW
Trigger: CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGC...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGCGAGAGGGCTCTGATTaGAGACAGGTGCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: VRHSPFPAPTSENLQLELREGSD*RQVPWG
Trigger: TCCCCAAGGCACCTGTCTCCAATCAGAGCCCTCTCG...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCTTCCTTTCCAGATCTaGCTGGCTGGGCTATGTGCG +
Preference number: 2 (lower is better)
Translates to: SEGAAHGPGVMLSWKESILPFQI*LAGLCA
Trigger: CGCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAG...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGCACGGAGCCACCGCATaGGTCCAGGAATTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: VRHSPFPAPTSENLQLELHGATA*VQEFCE
Trigger: CTCACAGAATTCCTGGACCCATGCGGTGGCTCCGTG...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACATCCTGCCTAAGGATCTaGCACACCTCTGGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTSCLRI*HTSGFS
Trigger: AGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGA...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGCCTCGGGGTCAGTCTaGAGCCAGGGCGACTTCATC +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAASGSV*SQGDFI
Trigger: GATGAAGTCGCCCTGGCTCCAGACTGACCCCGAGGC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 90 bp CCTTCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGGGGCCAGGACCCTGACAATCCCAAC +
Preference number: 2 (lower is better)
Translates to: PSLLVQRQPLLHIRP*IKPVLRGQDPDNPN
Trigger: GTTGGGATTGTCAGGGTCCTGGCCCCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCGAGAGCGCCGTTCATaGCGGTGCGAGAGTTGTAAG +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTRERRS*RCESCK
Trigger: CTTACAACTCTCGCACCGTCATGAACGGCGCTCTCG...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTATCTGGCCAGTGGTTCTaGCGGTCTACTGACTATCCA +
Preference number: 2 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLSGQWF*RSTDYP
Trigger: TGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGA...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGACACCTCTTGCGAGGCTaGGTTGTGAGCCTCACTCCT +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRHLLRG*VVSLTP
Trigger: AGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTG...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCACCTCTTGCGAGGCTaGGTTGTGAGCCTCACTCCT +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPHLLRG*VVSLTP
Trigger: AGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTG...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGGCAGGGGTTTTGAAGTaGAGAGCTTTGTTATATCCT +
Preference number: 2 (lower is better)
Translates to: TSCCLETPRRASGSVWSQAGVLK*RALLYP
Trigger: AGGATATAACAAAGCTCTTCACTTCAAAACCCCTGC...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGACACCCCTCGAGGCAGTaGCTGCCTTTGTGCGTGGTC +
Preference number: 2 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGHPSRQ*LPLCVV
Trigger: GACCACGCACAAAGGCAGTCACTGCCTCGAGGGGTG...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACAGGTGGACCAGAGTCATaGGCTCTCATGGAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTGGPES*ALMESF
Trigger: GAAACTTTCCATGAGAGCTCATGACTCTGGTCCACC...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCGTCAGCACCACGGGCTaGCCTTGTTCTGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTVSTTG*PCSELG
Trigger: TCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGAC...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCGGTTCCAAGAGCCCCTaGTGTGAAAATTCTGCGGTC +
Preference number: 2 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIGSKSP*CENSAV
Trigger: GACCGCAGAATTTTCACAGCAGGGGCTCTTGGAACC...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCATGCCCAGGTAGCCACTaGGTGCCAAGTCCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSACPGSH*VPSPLF
Trigger: GAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCA...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACACTCACCATTCCCTaGACCTACCTCGGAGAACCT +
Preference number: 2 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMTLTIP*TYLGEP
Trigger: AGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGT...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAACCACAGCCCAGCGGTTaGGTTCCCTTGGGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKPQPSG*VPLGSA
Trigger: TGCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGG...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGTCCTGCCAGCCTTCTTaGATCTCTAGCAGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQSCQPS*ISSSSL
Trigger: GAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGA...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTGGGGCCTATATCCTTTaGTCCACTCACCTCCCCACC +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPGAYIL*STHLPT
Trigger: GGTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCC...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCACATCTAATTCAGTATaGAAGCTCTGCCTCTCCACG +
Preference number: 2 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGTSNSV*KLCLST
Trigger: CGTGGAGAGGCAGAGCTTTCATACTGAATTAGATGT...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCGCTATTTCTTCCATCTaGACCAGGATTTGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLAISSI*TRIWKV
Trigger: TACCTTCCAAATCCTGGTTCAGATGGAAGAAATAGC...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCGCTATTTCTTCCATCTaGACCAGGATTTGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: TNAQVATACQVPSSPRATAISSI*TRIWKV
Trigger: TACCTTCCAAATCCTGGTTCAGATGGAAGAAATAGC...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGTTCTGACGGTCTACTaGCTATCCACTCACCATCTC +
Preference number: 2 (lower is better)
Translates to: IWLAGLCAGISISDPSQAVLTVY*LSTHHL
Trigger: GAGATGGTGAGTGGATAGTCAGTAGACCGTCAGAAC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTGGGCTGCCCTTGTTCTaGACTGGGAGCACTTCCCCC +
Preference number: 2 (lower is better)
Translates to: LESDFCYRASSFSFSQSPGLPLF*TGSTSP
Trigger: GGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCC...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAACACCCCTCGAGGCAGTaGCTGCCTTTGTGCGTGGTC +
Preference number: 2 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQHPSRQ*LPLCVV
Trigger: GACCACGCACAAAGGCAGTCACTGCCTCGAGGGGTG...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGACAAGAGCCCCTGCTGTaGAAATTCTGCGGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGQEPLL*KFCGLH
Trigger: GTGCAGACCGCAGAATTTTCACAGCAGGGGCTCTTG...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCTGCCTTGGGGAGAGTTaGGGAACGACTTCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTCLGES*GTTSFQ
Trigger: CTGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCA...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACATAGAACTTGATGCCTaGGCCCGCGCCCGGCAGCGT +
Preference number: 2 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHIELDA*ARARQR
Trigger: ACGCTGCCGGGCGCGGGCGCAGGCATCAAGTTCTAT...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
3UTR-3UTR GCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCGGGCCCATCTGCATaGCTGGGGCCTATATCCTTT +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAPGPSA*LGPISF
Trigger: AAAGGATATAGGCCCCAGGCATGCAGATGGGCCCGG...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAGACACCGGGCCCATCTaGATGCCTGGGGCCTATATC +
Preference number: 2 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGDTGPI*MPGAYI
Trigger: GATATAGGCCCCAGGCATGCAGATGGGCCCGGTGTC...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTGAAAATTCTGCGGTCTaGACCCCTCGAGGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLENSAV*TPRGSD
Trigger: GTCACTGCCTCGAGGGGTGCAGACCGCAGAATTTTC...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGATGGGGTTCAGAATTaGCCCTTGGGAGGGGGACAC +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSADGVQN*PLGGGH
Trigger: GTGTCCCCCTCCCAAGGGGCAATTCTGAACCCCATC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCTCCCCACGTGCCACCTaGCCTCAATCATTGACAGTG +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTSPRAT*PQSLTV
Trigger: CACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGA...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACAGCAGGTGAAGGACTTTaGCCATTCTCTATAGACAGG +
Preference number: 2 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTAGEGL*PFSIDR
Trigger: CCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGC...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCCATCCTGCGTTTACTaGACAGAACTTTCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIPSCVY*TELSAS
Trigger: GCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGG...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCTCCTGCCAGCCTTCTTaGATCTCTAGCAGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCSCQPS*ISSSSL
Trigger: GAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGA...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTGCCCATCTGCATGCCTaGGGCCTATATCCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPAHLHA*GLYPLV
Trigger: GACCAAAGGATATAGGCCCCAGGCATGCAGATGGGC...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGCCCATCTGCATGCCTaGGGCCTATATCCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGAHLHA*GLYPLV
Trigger: GACCAAAGGATATAGGCCCCAGGCATGCAGATGGGC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTGGTCCAAATAGGGGCTaGGTGGGGGTGTGTCTGCCC +
Preference number: 2 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTGPNRG*VGVCLP
Trigger: GGGCAGACACACCCCCACCCAGCCCCTATTTGGACC...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCGAATCGTTGAGAGTTTaGAATAGGACTGGGTGTTGT +
Preference number: 2 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCESLRV*NRTGCC
Trigger: ACAACACCCAGTCCTATTCCAAACTCTCAACGATTC...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCTGGAGACAGGTGCCTTaGGGAGAGTTGAGGAACGAC +
Preference number: 2 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCWRQVP*GELRND
Trigger: GTCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCA...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACACGAGAGGGCTCTGATTaGAGACAGGTGCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTREGSD*RQVPWG
Trigger: TCCCCAAGGCACCTGTCTCCAATCAGAGCCCTCTCG...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCTTCTCTATAGACAGGTaGACCAGAGTCATGAGCTCT +
Preference number: 2 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGFSIDR*TRVMSS
Trigger: AGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCGGGGTTATGCTGTCCTaGAAGGAGAGCATCCAAGGC +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTGVMLS*KESIQG
Trigger: GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCC...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAGGTCCTCAAGGCGGGTaGTGTCAGGATACAGATAGA +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRGPQGG*CQDTDR
Trigger: TCTATCTGTATCCTGACATCACCCGCCTTGAGGACC...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGTCATGGTCTCCACAATaGTGTGGGTCGGTTTCACGA +
Preference number: 2 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQSWSPQ*CGSVSR
Trigger: TCGTGAAACCGACCCACATCATTGTGGAGACCATGA...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAACACCTCTTGCGAGGCTaGGTTGTGAGCCTCACTCCT +
Preference number: 2 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKHLLRG*VVSLTP
Trigger: AGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTG...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCGACCAGAACCTGCTATaGCCCCATTCAAATGCAACA +
Preference number: 2 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIDQNLL*PHSNAT
Trigger: TGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTC...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACGGAGACATGAAGGTTaGGCATTATTACACAGGTAC +
Preference number: 2 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTRRHEG*ALLHRY
Trigger: GTACCTGTGTAATAATGCTCAACCTTCATGTCTCCG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGACCTCAGGCCACCTTaGAGGATTTTCTCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGDLRPP*RIFSWV
Trigger: GACCCAAGAGAAAATCCTTCAAGGTGGCCTGAGGTC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGCTGAAACACATACATaGCACCCTCCGTCACCATCG +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGAETHT*HPPSPS
Trigger: CGATGGTGACGGAGGGTGGCATGTATGTGTTTCAGC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCAGGAAAATTCCATCCTaGGTTTACTGGACAGAACTT +
Preference number: 2 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCRKIPS*VYWTEL
Trigger: AAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCT...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGAAAATTCTGCGGTCTaGACCCCTCGAGGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAENSAV*TPRGSD
Trigger: GTCACTGCCTCGAGGGGTGCAGACCGCAGAATTTTC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTCGCAGAGCTATGCTCTaGACACAGAGCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLARRAML*TQSQGW
Trigger: CCAGCCCTGGCTCTGTGTGCAGAGCATAGCTCTGCG...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCGCAGGTGAAGGACTTTaGCCATTCTCTATAGACAGG +
Preference number: 2 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIAGEGL*PFSIDR
Trigger: CCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGC...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAATTCCTGGCTCACAGTaGCTCCCTGAGCCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGIPGSQ*LPEPQL
Trigger: TAACTGAGGCTCAGGGAGGCACTGTGAGCCAGGAAT...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCACGGACATCTTCCCGTaGGTTTTCTTTTTGTACAAA +
Preference number: 2 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLTDIFP*VFFLYK
Trigger: TTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGT...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACACTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGT +
Preference number: 2 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTLLSSP*VCQLMG
Trigger: ACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAG...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGCCCATCTGCATGCCTaGGGCCTATATCCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAAHLHA*GLYPLV
Trigger: GACCAAAGGATATAGGCCCCAGGCATGCAGATGGGC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAGCCCTTGTTCTGAACTaGGAGCACTTCCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGALVLN*EHFPQW
Trigger: CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGC...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCAACCCAAAATACTGTaGCCTTTCACCCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTQPKIL*PFTQGA
Trigger: GGCTCCCTGGGTGAAAGGCCACAGTATTTTGGGTTG...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACAGTCTGCCTGTGTCTTTaGTCTAGAATTTGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTVCLCL*SRIWSE
Trigger: CTCAGACCAAATTCTAGACCAAAGACACAGGCAGAC...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGATCCTGCCTAAGGATCTaGCACACCTCTGGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRSCLRI*HTSGFS
Trigger: AGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGA...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACAGCTATTTCTTCCATCTaGACCAGGATTTGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTAISSI*TRIWKV
Trigger: TACCTTCCAAATCCTGGTTCAGATGGAAGAAATAGC...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCACCAGTCTCCTTTATGTaGAGGGTTGGTTCATTCCTT +
Preference number: 2 (lower is better)
Translates to: IWLAGLCAGISISDPSQAPVSFM*RVGSFL
Trigger: AAGGAATGAACCAACCCTTCACATAAAGGAGACTGG...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCGTTCTGACGGTCTACTaGCTATCCACTCACCATCTC +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTVLTVY*LSTHHL
Trigger: GAGATGGTGAGTGGATAGTCAGTAGACCGTCAGAAC...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGTGCGAGGCTGAGTTGTaGGCCTCACTCCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQCEAEL*ASLLPA
Trigger: GGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCA...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGGACCAGAACCTGCTATaGCCCCATTCAAATGCAACA +
Preference number: 2 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQDQNLL*PHSNAT
Trigger: TGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTC...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAATGTTGCTTGGGGAATaGCCAGAACCTGCTATGACC +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRMLLGE*PEPAMT
Trigger: GGTCATAGCAGGTTCTGGTCATTCCCCAAGCAACAT...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCATGTTGCTTGGGGAATaGCCAGAACCTGCTATGACC +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTMLLGE*PEPAMT
Trigger: GGTCATAGCAGGTTCTGGTCATTCCCCAAGCAACAT...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATGCCTTGGGGAGAGTTaGGGAACGACTTCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKCLGES*GTTSFQ
Trigger: CTGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCA...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTGGGCGAGAGGGCTCTaGTTGGAGACAGGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: LPILYRQVDQSHELSWKVWARGL*LETGAL
Trigger: CAAGGCACCTGTCTCCAATCAGAGCCCTCTCGCCCA...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCGTTTATACGGAGACATaGAGGTTGAGCATTATTACA +
Preference number: 2 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLVYTET*RLSIIT
Trigger: TGTAATAATGCTCAACCTTCATGTCTCCGTATAAAC...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGGAAAATGAGATCTATTaGTGGCAAGAAGATCAATTC +
Preference number: 2 (lower is better)
Translates to: TSCCLETPRRASGSVWSQENEIY*WQEDQF
Trigger: GAATTGATCTTCTTGCCAGCAATAGATCTCATTTTC...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTGCCCAGGTAGCCACTaGGTGCCAAGTCCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LPILYRQVDQSHELSWKVCPGSH*VPSPLF
Trigger: GAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCA...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGCCATGTCCAGAATGTTaGAATTTGCCTACCAACCCA +
Preference number: 2 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWPCPEC*NLPTNP
Trigger: TGGGTTGGTAGGCAAATTGCAACATTCTGGACATGG...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGTCCAGCCCAGCCCAATaGCCCAGTTGGGGTACACGT +
Preference number: 2 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWSSPAQ*PSWGTR
Trigger: ACGTGTACCCCAACTGGGCCATTGGGCTGGGCTGGA...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATACAAATAGGGGCTGGGTaGGGGTGTGTCTGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: GDLVCLCLWSRIWSENLIQIGAG*GCVCPG
Trigger: CCCAGGGCAGACACACCCCCACCCAGCCCCTATTTG...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGGTCCAAATAGGGGCTaGGTGGGGGTGTGTCTGCCC +
Preference number: 2 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMGPNRG*VGVCLP
Trigger: GGGCAGACACACCCCCACCCAGCCCCTATTTGGACC...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGGACTGCCTTTGTGCGTaGTCACGTTTCGGTTTCATT +
Preference number: 2 (lower is better)
Translates to: VRHSPFPAPTSENLQLELDCLCA*SRFGFI
Trigger: AATGAAACCGAAACGTGACCACGCACAAAGGCAGTC...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAACACGGAGCCACCGCATaGGTCCAGGAATTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQHGATA*VQEFCE
Trigger: CTCACAGAATTCCTGGACCCATGCGGTGGCTCCGTG...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGACATCTAATTCAGTATaGAAGCTCTGCCTCTCCACG +
Preference number: 2 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQTSNSV*KLCLST
Trigger: CGTGGAGAGGCAGAGCTTTCATACTGAATTAGATGT...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCATGCGAGGCTGAGTTGTaGGCCTCACTCCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPCEAEL*ASLLPA
Trigger: GGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCA...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAGACCAGAACCTGCTATaGCCCCATTCAAATGCAACA +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRDQNLL*PHSNAT
Trigger: TGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTC...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGACCAGAACCTGCTATaGCCCCATTCAAATGCAACA +
Preference number: 2 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGDQNLL*PHSNAT
Trigger: TGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTC...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCAACTTTAAGAGATGCTaGGATGTTGCTTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: SEGAAHGPGVMLSWKESINFKRC*DVAWGM
Trigger: CATTCCCCAAGCAACATCTCAGCATCTCTTAAAGTT...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCACACCCCTCGAGGCAGTaGCTGCCTTTGTGCGTGGTC +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPHPSRQ*LPLCVV
Trigger: GACCACGCACAAAGGCAGTCACTGCCTCGAGGGGTG...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCCGGAGACATGAAGGTTaGGCATTATTACACAGGTAC +
Preference number: 2 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFRRHEG*ALLHRY
Trigger: GTACCTGTGTAATAATGCTCAACCTTCATGTCTCCG...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCGAAAATGAGATCTATTaGTGGCAAGAAGATCAATTC +
Preference number: 2 (lower is better)
Translates to: TNAQVATACQVPSSPRATENEIY*WQEDQF
Trigger: GAATTGATCTTCTTGCCAGCAATAGATCTCATTTTC...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACTGGACAGAACTTTCTaGCAGCTACACAGCACCGAA +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSALDRTF*QLHSTE
Trigger: TTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAG...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGTCTTCCCCCTGGGTCTaGCAGCTAATGGGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWSSPWV*QLMGPL
Trigger: GAGAGGACCCATTAGCTGGCAGACCCAGGGGGAAGA...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGTTAGAATCAGACTTCTaGTATAGGGCCTCCTCATTC +
Preference number: 2 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWLESDF*YRASSF
Trigger: GAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGCCGGGCCCATCTGCATaGCTGGGGCCTATATCCTTT +
Preference number: 2 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWPGPSA*LGPISF
Trigger: AAAGGATATAGGCCCCAGGCATGCAGATGGGCCCGG...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGTGTAAACCCAGCTATTaGAGGGGTTTTGAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMCKPSY*RGFEVK
Trigger: CTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACA...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAGAAAATTCTGCGGTCTaGACCCCTCGAGGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQENSAV*TPRGSD
Trigger: GTCACTGCCTCGAGGGGTGCAGACCGCAGAATTTTC...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTTCCCCACGTGCCACCTaGCCTCAATCATTGACAGTG +
Preference number: 2 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLASPRAT*PQSLTV
Trigger: CACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGA...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAATCCCCACGTGCCACCTaGCCTCAATCATTGACAGTG +
Preference number: 2 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQSPRAT*PQSLTV
Trigger: CACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGA...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAACCTGGGGACTTGGTCTaGCTGTGTCTTTGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKPGDLV*LCLWSR
Trigger: TCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGG...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGGGCTGGAGGGGCCATaGTGTGCTCTCCCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPGLEGP*CALPLC
Trigger: ACACAAGGGGAGAGCACAGCATGGCCCCTCCAGCCC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGCAGCACCAGGAGCATaGCGAATGGAAAAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHAAPGA*RMEKWL
Trigger: CAGCCACTTTTCCATTCGCCATGCTCCTGGTGCTGC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610642.4
3UTR-3UTR CCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCATCCTGCGTTTACTaGACAGAACTTTCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAPSCVY*TELSAS
Trigger: GCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGG...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGATCTTTAATGAGGGCTTaGCAGGAGTCTCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGSLMRA*QESPRL
Trigger: CAGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGA...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGACTGCCTTTGTGCGTaGTCACGTTTCGGTTTCATT +
Preference number: 2 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGDCLCA*SRFGFI
Trigger: AATGAAACCGAAACGTGACCACGCACAAAGGCAGTC...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTACATCTAATTCAGTATaGAAGCTCTGCCTCTCCACG +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPTSNSV*KLCLST
Trigger: CGTGGAGAGGCAGAGCTTTCATACTGAATTAGATGT...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGGCTATTTCTTCCATCTaGACCAGGATTTGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: VRHSPFPAPTSENLQLELAISSI*TRIWKV
Trigger: TACCTTCCAAATCCTGGTTCAGATGGAAGAAATAGC...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTGAGGGGCCAGGACCCTaGCAATCCCAACCTTCTAGA +
Preference number: 2 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCEGPGP*QSQPSR
Trigger: TCTAGAAGGTTGGGATTGTCAGGGTCCTGGCCCCTC...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGTGGCGGTACCCGGGTaGTACAAGAGTGCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPVAVPG*YKSALK
Trigger: CTTCAGGGCACTCTTGTATCACCCGGGTACCGCCAC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGCTGAAACACATACATaGCACCCTCCGTCACCATCG +
Preference number: 2 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHAETHT*HPPSPS
Trigger: CGATGGTGACGGAGGGTGGCATGTATGTGTTTCAGC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
3UTR-3UTR GCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATGAAAATGAGATCTATTaGTGGCAAGAAGATCAATTC +
Preference number: 2 (lower is better)
Translates to: STTGCPCSELGALPPVEDENEIY*WQEDQF
Trigger: GAATTGATCTTCTTGCCAGCAATAGATCTCATTTTC...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGACTGGACAGAACTTTCTaGCAGCTACACAGCACCGAA +
Preference number: 2 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGLDRTF*QLHSTE
Trigger: TTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAG...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAAGGAAAATTCCATCCTaGGTTTACTGGACAGAACTT +
Preference number: 2 (lower is better)
Translates to: IWLAGLCAGISISDPSQARKIPS*VYWTEL
Trigger: AAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCT...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCAGGAAAATTCCATCCTaGGTTTACTGGACAGAACTT +
Preference number: 2 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIRKIPS*VYWTEL
Trigger: AAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCT...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAATGTGAGCCTCACTCCTaGCAGCCTTCTTGGATCTCT +
Preference number: 2 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQCEPHS*QPSWIS
Trigger: AGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACA...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGAATGACCAGAACCTaGTATGACCCCATTCAAATG +
Preference number: 2 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGGMTRT*YDPIQM
Trigger: CATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCC...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGGTCAGCACCACGGGCTaGCCTTGTTCTGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQVSTTG*PCSELG
Trigger: TCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGAC...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTGGTTCCAAGAGCCCCTaGTGTGAAAATTCTGCGGTC +
Preference number: 2 (lower is better)
Translates to: LESDFCYRASSFSFSQSPGSKSP*CENSAV
Trigger: GACCGCAGAATTTTCACAGCAGGGGCTCTTGGAACC...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAACAGGTCACAATaGTACTCCATAAAATCAGGG +
Preference number: 2 (lower is better)
Translates to: IWLAGLCAGISISDPSQAENRSQ*YSIKSG
Trigger: CCCTGATTTTATGGAGTAGCATTGTGACCTGTTTTC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCCATGTCCAGAATGTTaGAATTTGCCTACCAACCCA +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPPCPEC*NLPTNP
Trigger: TGGGTTGGTAGGCAAATTGCAACATTCTGGACATGG...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTAATGAGATCTATTGCTaGCAAGAAGATCAATTCAAG +
Preference number: 2 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPNEIYC*QEDQFK
Trigger: CTTGAATTGATCTTCTTGCCAGCAATAGATCTCATT...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTCTTTAATGAGGGCTTaGCAGGAGTCTCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: LESDFCYRASSFSFSQSPSLMRA*QESPRL
Trigger: CAGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGA...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGGAATCGTTGAGAGTTTaGAATAGGACTGGGTGTTGT +
Preference number: 2 (lower is better)
Translates to: VRHSPFPAPTSENLQLELESLRV*NRTGCC
Trigger: ACAACACCCAGTCCTATTCCAAACTCTCAACGATTC...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAGTCTGCCTGTGTCTTTaGTCTAGAATTTGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRVCLCL*SRIWSE
Trigger: CTCAGACCAAATTCTAGACCAAAGACACAGGCAGAC...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 90 bp CCTGACAATCCCAACCTTCTAGAAAACTCTCCTAGGCCTTCTCTTTaGGGTCCGCAGGTGGTAAATGTCTGTAAACCCAGCTATTGCAGG +
Preference number: 2 (lower is better)
Translates to: PDNPNLLENSPRPSL*GPQVVNVCKPSYCR
Trigger: CCTGCAATAGCTGGGTTTACAGACATTTACCACCTGCGGACCCAAAAGAGAAGGCCTAGGAGAGTTTTCTAGAAGGTTGGGATTGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAGCAGGGGTTTTGAAGTaGAGAGCTTTGTTATATCCT +
Preference number: 2 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRAGVLK*RALLYP
Trigger: AGGATATAACAAAGCTCTTCACTTCAAAACCCCTGC...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTGCAGGGGTTTTGAAGTaGAGAGCTTTGTTATATCCT +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPAGVLK*RALLYP
Trigger: AGGATATAACAAAGCTCTTCACTTCAAAACCCCTGC...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGGTTTATACGGAGACATaGAGGTTGAGCATTATTACA +
Preference number: 2 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMVYTET*RLSIIT
Trigger: TGTAATAATGCTCAACCTTCATGTCTCCGTATAAAC...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGAGGCCCTTCTCTCCCTaGCCGTCAGGAAATCTCTGT +
Preference number: 2 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQRPFSP*PSGNLC
Trigger: ACAGAGATTTCCTGACGGTCAGGGAGAGAAGGGCCT...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGAGTCCCAAAGGGGCCTaGGACCTCCACCATTCTTGT +
Preference number: 2 (lower is better)
Translates to: ENKIRYEKRTWCPLMASASPKGA*DLHHSC
Trigger: ACAAGAATGGTGGAGGTCTCAGGCCCCTTTGGGACT...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622176.4
3UTR-3UTR GCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCATAGAACTTGATGCCTaGGCCCGCGCCCGGCAGCGT +
Preference number: 2 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVIELDA*ARARQR
Trigger: ACGCTGCCGGGCGCGGGCGCAGGCATCAAGTTCTAT...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAACTGGACAGAACTTTCTaGCAGCTACACAGCACCGAA +
Preference number: 2 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQLDRTF*QLHSTE
Trigger: TTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAG...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATTAGAATCAGACTTCTaGTATAGGGCCTCCTCATTC +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGLESDF*YRASSF
Trigger: GAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGGAATGACCAGAACCTaGTATGACCCCATTCAAATG +
Preference number: 2 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAGMTRT*YDPIQM
Trigger: CATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACATCAACAGGTATGTCATaGTTCATTCCTGCAGGCAAC +
Preference number: 2 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTSTGMS*FIPAGN
Trigger: GTTGCCTGCAGGAATGAAGCATGACATACCTGTTGA...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTTGTAAACCCAGCTATTaGAGGGGTTTTGAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPCKPSY*RGFEVK
Trigger: CTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACA...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTTGTAAACCCAGCTATTaGAGGGGTTTTGAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLCKPSY*RGFEVK
Trigger: CTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACA...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTCCTCGAGGCAGTGACTaGCTTTGTGCGTGGTCACGT +
Preference number: 2 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFPRGSD*LCAWSR
Trigger: ACGTGACCACGCACAAAGGCAGTCACTGCCTCGAGG...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGGGTTCCAAGAGCCCCTaGTGTGAAAATTCTGCGGTC +
Preference number: 2 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWGSKSP*CENSAV
Trigger: GACCGCAGAATTTTCACAGCAGGGGCTCTTGGAACC...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCACCCCTCTTCCCCACGTaGCACCTGCCCTCAATCATT +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPPLFPT*HLPSII
Trigger: AATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGG...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGCAGAATGTTGCAATTTaGCTACCAACCCAAAATACT +
Preference number: 2 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWQNVAI*LPTQNT
Trigger: AGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTG...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCTCAACTTCAACAAACTaGCTATCCAGTCCAAGCAAG +
Preference number: 2 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTSTSTN*LSSPSK
Trigger: CTTGCTTGGACTGGATAGCCAGTTTGTTGAAGTTGA...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTGCCCAATGGCCCAGTTaGGGTACACGTATGTTTTGT +
Preference number: 2 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTAQWPS*GTRMFC
Trigger: ACAAAACATACGTGTACCCCAACTGGGCCATTGGGC...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTGAGCACTTCCCCCAGTaGAGGATACAGACTCAAAAG +
Preference number: 2 (lower is better)
Translates to: LESDFCYRASSFSFSQSPEHFPQ*RIQTQK
Trigger: CTTTTGAGTCTGTATCCTCCACTGGGGGAAGTGCTC...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGCCCTTGTTCTGAACTaGGAGCACTTCCCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPALVLN*EHFPQW
Trigger: CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTTTCAGAATTGCCCCTTaGGAGGGGGACACCAAAGGC +
Preference number: 2 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCFRIAP*EGDTKG
Trigger: GCCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAA...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGCTTCCTTTCCAGATCTaGCTGGCTGGGCTATGTGCG +
Preference number: 2 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQLPFQI*LAGLCA
Trigger: CGCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAG...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CAGAACTGGGATTCCAGTCCTGTCTATGGCCAAAGGCATAAATTTATCTCCAGAGAGGAGATAAGGAAGTaGGCCATCCTCTCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: QNWDSSPVYGQRHKFISREEIRK*AILSAP
Trigger: TGGGGCAGAGAGGATGGCCCACTTCCTTATCTCCTC...TCTGGAGATAAATTTATGCCTTTGGCCATAGACAGGACTGGAATCCCAGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621751.4
3UTR-3UTR TCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTATTGCAGGGGTTTTaGAGTGAAGAGCTTTGTTAT +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPLLQGF*SEELCY
Trigger: ATAACAAAGCTCTTCACTTCAAAACCCCTGCAATAG...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCACAAGAGCCCCTGCTGTaGAAATTCTGCGGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPQEPLL*KFCGLH
Trigger: GTGCAGACCGCAGAATTTTCACAGCAGGGGCTCTTG...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAAGGAAAATTCCATCCTaGGTTTACTGGACAGAACTT +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGRKIPS*VYWTEL
Trigger: AAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCT...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGATCAACAGGTATGTCATaGTTCATTCCTGCAGGCAAC +
Preference number: 2 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGSTGMS*FIPAGN
Trigger: GTTGCCTGCAGGAATGAAGCATGACATACCTGTTGA...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAAGCTGTTCTTGGTGTaGCTTGCTAGGTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFKLFLV*LARCQG
Trigger: GCCCTGGCACCTAGCAAGGCACACCAAGAACAGCTT...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGAAAACAGGTCACAATaGTACTCCATAAAATCAGGG +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGENRSQ*YSIKSG
Trigger: CCCTGATTTTATGGAGTAGCATTGTGACCTGTTTTC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTGAAAACAGGTCACAATaGTACTCCATAAAATCAGGG +
Preference number: 2 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLENRSQ*YSIKSG
Trigger: CCCTGATTTTATGGAGTAGCATTGTGACCTGTTTTC...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAGTACTCGCAGAGCTATaGTCTGCACACAGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLVLAEL*SAHRAR
Trigger: CCTGGCTCTGTGTGCAGAGCATAGCTCTGCGAGTAC...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGACAAAAGCTTGTATACTaGAAGACTGAACTACACACC +
Preference number: 2 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGQKLVY*KTELHT
Trigger: GGTGTGTAGTTCAGTCTTGCAGTATACAAGCTTTTG...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAAATGAGATCTATTGCTaGCAAGAAGATCAATTCAAG +
Preference number: 2 (lower is better)
Translates to: IWLAGLCAGISISDPSQANEIYC*QEDQFK
Trigger: CTTGAATTGATCTTCTTGCCAGCAATAGATCTCATT...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTCTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGT +
Preference number: 2 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSLLSSP*VCQLMG
Trigger: ACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAG...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAGTCTGCCTGTGTCTTTaGTCTAGAATTTGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGVCLCL*SRIWSE
Trigger: CTCAGACCAAATTCTAGACCAAAGACACAGGCAGAC...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 90 bp GAGAATCTTATAAGAAGAGGCCTTCCTCAGGCCATGTCCAGAATGTaGCAATTTGCCTACCAACCCAAAATACTGTGGCCTTTCACCCAG +
Preference number: 2 (lower is better)
Translates to: ENLIRRGLPQAMSRM*QFAYQPKILWPFTQ
Trigger: CTGGGTGAAAGGCCACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTCTTCTTATAAGATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTACATCTAATTCAGTATaGAAGCTCTGCCTCTCCACG +
Preference number: 2 (lower is better)
Translates to: LESDFCYRASSFSFSQSPTSNSV*KLCLST
Trigger: CGTGGAGAGGCAGAGCTTTCATACTGAATTAGATGT...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTCCAGTCTCCTTTATGTaGAGGGTTGGTTCATTCCTT +
Preference number: 2 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTPVSFM*RVGSFL
Trigger: AAGGAATGAACCAACCCTTCACATAAAGGAGACTGG...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGGGTGGACCAGAGTCATaGGCTCTCATGGAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQGGPES*ALMESF
Trigger: GAAACTTTCCATGAGAGCTCATGACTCTGGTCCACC...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCTCTTCCCCCTGGGTCTaGCAGCTAATGGGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVSSPWV*QLMGPL
Trigger: GAGAGGACCCATTAGCTGGCAGACCCAGGGGGAAGA...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAATCAACAGGTATGTCATaGTTCATTCCTGCAGGCAAC +
Preference number: 2 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQSTGMS*FIPAGN
Trigger: GTTGCCTGCAGGAATGAAGCATGACATACCTGTTGA...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAAACAGTGAAATATGTATaGCTGCCAAAGATGGGGTTC +
Preference number: 2 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKTVKYV*LPKMGF
Trigger: GAACCCCATCTTTGGCAGGCATACATATTTCACTGT...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCAGAATGTTGCAATTTaGCTACCAACCCAAAATACT +
Preference number: 2 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPQNVAI*LPTQNT
Trigger: AGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTG...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAAGAATCGTTGAGAGTTTaGAATAGGACTGGGTGTTGT +
Preference number: 2 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKESLRV*NRTGCC
Trigger: ACAACACCCAGTCCTATTCCAAACTCTCAACGATTC...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 90 bp CATTTCCTTTTCCATAAAGGCTTGTCTTTGGTTGTCAGGAAGACCTaGAGGATGTTGCTGGATGTAGCCCTGGTTAGACACTCACCATTC +
Preference number: 2 (lower is better)
Translates to: HFLFHKGLSLVVRKT*RMLLDVALVRHSPF
Trigger: GAATGGTGAGTGTCTAACCAGGGCTACATCCAGCAACATCCTCAAGGTCTTCCTGACAACCAAAGACAAGCCTTTATGGAAAAGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAATGTTGCTTGGGGAATaGCCAGAACCTGCTATGACC +
Preference number: 2 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLMLLGE*PEPAMT
Trigger: GGTCATAGCAGGTTCTGGTCATTCCCCAAGCAACAT...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAGAGGGGCCAGGACCCTaGCAATCCCAACCTTCTAGA +
Preference number: 2 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQEGPGP*QSQPSR
Trigger: TCTAGAAGGTTGGGATTGTCAGGGTCCTGGCCCCTC...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTGCTGAAACACATACATaGCACCCTCCGTCACCATCG +
Preference number: 2 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVAETHT*HPPSPS
Trigger: CGATGGTGACGGAGGGTGGCATGTATGTGTTTCAGC...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTTGTAAACCCAGCTATTaGAGGGGTTTTGAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLACKPSY*RGFEVK
Trigger: CTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACA...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTACAGTGAAATATGTATaGCTGCCAAAGATGGGGTTC +
Preference number: 2 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLATVKYV*LPKMGF
Trigger: GAACCCCATCTTTGGCAGGCATACATATTTCACTGT...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAAATGAGATCTATTGCTaGCAAGAAGATCAATTCAAG +
Preference number: 2 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGNEIYC*QEDQFK
Trigger: CTTGAATTGATCTTCTTGCCAGCAATAGATCTCATT...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCTCTGGCCAGTGGTTCTaGCGGTCTACTGACTATCCA +
Preference number: 2 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVSGQWF*RSTDYP
Trigger: TGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGA...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTCTATTGCAGGGGTTTTaGAGTGAAGAGCTTTGTTAT +
Preference number: 2 (lower is better)
Translates to: LESDFCYRASSFSFSQSPLLQGF*SEELCY
Trigger: ATAACAAAGCTCTTCACTTCAAAACCCCTGCAATAG...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAGACTGCCTTTGTGCGTaGTCACGTTTCGGTTTCATT +
Preference number: 2 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLDCLCA*SRFGFI
Trigger: AATGAAACCGAAACGTGACCACGCACAAAGGCAGTC...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 90 bp TCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTCATTCCTTaGGCATCTCTCTTCTTCACTAAGCCAAGTTTAATGAGGTATCTC +
Preference number: 2 (lower is better)
Translates to: SASASLLYVKGWFIP*ASLFFTKPSLMRYL
Trigger: GAGATACCTCATTAAACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 90 bp TTTCTGGACTGCCCACCTCTACAAGTTTGGCTCTCTGGGTTTGTTTaGTTTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGG +
Preference number: 2 (lower is better)
Translates to: FLDCPPLQVWLSGFV*FSLVVLYFDFCTQW
Trigger: CCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAAACAAAACAAACCCAGAGAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAACACCTCTGGCTTCTCTaGACCTCAGTTCCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQHLWLL*TSVPSF
Trigger: GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTG...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTACGGACATCTTCCCGTaGGTTTTCTTTTTGTACAAA +
Preference number: 2 (lower is better)
Translates to: LPILYRQVDQSHELSWKVTDIFP*VFFLYK
Trigger: TTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGT...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAACAACCCAAAATACTGTaGCCTTTCACCCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQQPKIL*PFTQGA
Trigger: GGCTCCCTGGGTGAAAGGCCACAGTATTTTGGGTTG...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAACTTTAAGAGATGCTaGGATGTTGCTTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFNFKRC*DVAWGM
Trigger: CATTCCCCAAGCAACATCTCAGCATCTCTTAAAGTT...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGCAGGGGTTTTGAAGTaGAGAGCTTTGTTATATCCT +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPAGVLK*RALLYP
Trigger: AGGATATAACAAAGCTCTTCACTTCAAAACCCCTGC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAACAGTGAAATATGTATaGCTGCCAAAGATGGGGTTC +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPTVKYV*LPKMGF
Trigger: GAACCCCATCTTTGGCAGGCATACATATTTCACTGT...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGACGGACATCTTCCCGTaGGTTTTCTTTTTGTACAAA +
Preference number: 2 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMTDIFP*VFFLYK
Trigger: TTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGT...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR TCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCGGAGACATGAAGGTTaGGCATTATTACACAGGTAC +
Preference number: 2 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVRRHEG*ALLHRY
Trigger: GTACCTGTGTAATAATGCTCAACCTTCATGTCTCCG...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAAGTCATGAGCTCTCATaGAAAGTTTCGTTTATACGG +
Preference number: 2 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPSHELS*KVSFIR
Trigger: CCGTATAAACGAAACTTTCCATGAGAGCTCATGACT...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCTTAGAATCAGACTTCTaGTATAGGGCCTCCTCATTC +
Preference number: 2 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVLESDF*YRASSF
Trigger: GAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAATTCTCTATAGACAGGTaGACCAGAGTCATGAGCTCT +
Preference number: 2 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQFSIDR*TRVMSS
Trigger: AGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 90 bp CACAAAAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTaGTTCAAATACAAATGTTCCTCCTCAGAAAAGTCTCTTGTTGGT +
Preference number: 2 (lower is better)
Translates to: HKSLYTARLNYTPRI*FKYKCSSSEKSLVG
Trigger: ACCAACAAGAGACTTTTCTGAGGAGGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAGAAAATGAGATCTATTaGTGGCAAGAAGATCAATTC +
Preference number: 2 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLENEIY*WQEDQF
Trigger: GAATTGATCTTCTTGCCAGCAATAGATCTCATTTTC...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR GCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCAGAATGTTGCAATTTaGCTACCAACCCAAAATACT +
Preference number: 2 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVQNVAI*LPTQNT
Trigger: AGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTG...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp CTGGCTGGGTGGGGGACCAGTGTGGCGGTACCCGGGTaGTACAAGAGTGCCCTGAAGTGGGCTGGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: LAGWGTSVAVPG*YKSALKWAGGA
Trigger: GGCCCCTCCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCCCACCCAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp CCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTaGAGTGGGCTGGAGGGGCCATGCTGTGCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: PVWRYPGDTRVP*SGLEGPCCALP
Trigger: GGGGAGAGCACAGCATGGCCCCTCCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGTCCACAGCCCAGCGGTaGGGTTCCCTTGGGGTCAGC +
Preference number: 3 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWSTAQR*GSLGVS
Trigger: GCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGGA...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTGCGGGGCCTGGGGACTaGGTCTGCCTGTGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPAGPGD*VCLCLW
Trigger: CCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCGC...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp AGCTCACGGAGCCACCGCATGGGTCCAGGAATTCTGTaGGGATGGTGGGAGTGTGGCTGCTGCTGCTCCCCT +
Preference number: 3 (lower is better)
Translates to: SSRSHRMGPGIL*GWWECGCCCSP
Trigger: AGGGGAGCAGCAGCAGCCACACTCCCACCATCCTCACAGAATTCCTGGACCCATGCGGTGGCTCCGTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp GCTGGGCGAGAGGGCTCTGATTGGAGACAGGTGCCTTaGGGAGAGTTGAGGAACGACTTCCTTCCAGGCGGG +
Preference number: 3 (lower is better)
Translates to: AGREGSDWRQVP*GELRNDFLPGG
Trigger: CCCGCCTGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCAATCAGAGCCCTCTCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp CTGGAAGGAGAGCATCCAAGGCCACTTCCTGCTGCCTaGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGA +
Preference number: 3 (lower is better)
Translates to: LEGEHPRPLPAA*KLPAEPRGQSG
Trigger: TCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTTGGATGCTCTCCTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGGTTCAGAATTGCCCCTaGGGAGGGGGACACCAAAGG +
Preference number: 3 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWVQNCP*GGGHQR
Trigger: CCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAAC...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGGTGCCTTGGGGAGAGTaGAGGAACGACTTCCTTCCA +
Preference number: 3 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWVPWGE*RNDFLP
Trigger: TGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCAC...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGTTGGAGACAGGTGCCTaGGGGAGAGTTGAGGAACGA +
Preference number: 3 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWLETGA*GRVEER
Trigger: TCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCAA...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp GGGGCAGTGAAGGAGCTGCACATGGCCCAGGGGTTATaGTGTCCTGGAAGGAGAGCATCCAAGGCCACTTCC +
Preference number: 3 (lower is better)
Translates to: GAVKELHMAQGL*CPGRRASKATS
Trigger: GGAAGTGGCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp GGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTaGAGGGGCCATGCTGTGCTCTCCCCTTGTGTTTCC +
Preference number: 3 (lower is better)
Translates to: GTRVIQECPEVG*RGHAVLSPCVS
Trigger: GGAAACACAAGGGGAGAGCACAGCATGGCCCCTCCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp GATCAGGGAGAGAAGGAAAGGGGGAGGGCTGCCCCCTaGTTTCTGGACTGCCCACCTCTACAAGTTTGGCTC +
Preference number: 3 (lower is better)
Translates to: DQGEKERGRAAP*FLDCPPLQVWL
Trigger: GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCTTTCCTTCTCTCCCTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp CCCAGGGGAGGAGATAAGGAAGTGGGCCATCCTCTCTaGCCCACCCATGTCCTCCTCCTTGCTTCAATGAGG +
Preference number: 3 (lower is better)
Translates to: PRGGDKEVGHPL*PTHVLLLASMR
Trigger: CCTCATTGAAGCAAGGAGGAGGACATGGGTGGGGCAGAGAGGATGGCCCACTTCCTTATCTCCTCCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621751.4
3UTR-3UTR CAA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCAGCCCAATGGCCCAGTaGGGGTACACGTATGTTTTG +
Preference number: 3 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLSPMAQ*GYTYVL
Trigger: CAAAACATACGTGTACCCCAACTGGGCCATTGGGCT...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCATCTTTAATGAGGGCTaGGCAGGAGTCTCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCIFNEG*AGVSQA
Trigger: AGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGAT...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGTGTTCTTGGTGTGCCTaGCTAGGTGCCAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWCSWCA*LGARAA
Trigger: GGCTGCCCTGGCACCTAGCAAGGCACACCAAGAACA...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCLHIRP*IKPVLR
Trigger: CCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAG...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGTGTTCTTGGTGTGCCTaGCTAGGTGCCAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQCSWCA*LGARAA
Trigger: GGCTGCCCTGGCACCTAGCAAGGCACACCAAGAACA...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCACTCAAAAGCTGTTCTaGGTGTGCCTTGCTAGGTGC +
Preference number: 3 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLTQKLF*VCLARC
Trigger: GCACCTAGCAAGGCACACCAAGAACAGCTTTTGAGT...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGTTCAGAATTGCCCCTaGGGAGGGGGACACCAAAGG +
Preference number: 3 (lower is better)
Translates to: IWLAGLCAGISISDPSQAVQNCP*GGGHQR
Trigger: CCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAAC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp CCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTaGCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: PPLARLSCEPHS*QPSWISSSSLS
Trigger: AGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp AGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTaGATCTCTAGCAGCTCCCTCTCTGGCCAGTGGTTC +
Preference number: 3 (lower is better)
Translates to: RLSCEPHSCQPS*ISSSSLSGQWF
Trigger: GAACCACTGGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGCCCTTGGGGCCTATATCCTTaGGTCCACTCACCTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LSYLIYNKGVGLGDPGGPWGLYP*VHSPPH
Trigger: GTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCCA...AGGGCCTCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCACTCAAAAGCTGTTCTaGGTGTGCCTTGCTAGGTGC +
Preference number: 3 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGTQKLF*VCLARC
Trigger: GCACCTAGCAAGGCACACCAAGAACAGCTTTTGAGT...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp AAGGAAAGGGGGAGGGCTGCCCCCTGCTTTCTGGACTaGCCACCTCTACAAGTTTGGCTCTCTGGGTTTGTT +
Preference number: 3 (lower is better)
Translates to: KERGRAAPCFLD*PPLQVWLSGFV
Trigger: AACAAACCCAGAGAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCTTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp GAGGAACGACTTCCTTCCAGGCGGGGCCTGGGGACTTaGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTG +
Preference number: 3 (lower is better)
Translates to: EERLPSRRGLGT*SACVFGLEFGL
Trigger: CAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCGCCTGGAAGGAAGTCGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACAAGCACAAAGTCGATCTaGCTAGACCACTTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTSTKSI*LDHFSL
Trigger: GAGGGAGAAGTGGTCTAGCAAGATCGACTTTGTGCT...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR CAA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCACTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: IWLAGLCAGISISDPSQALHIRP*IKPVLR
Trigger: CCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAG...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTGTTGTCAGGAAGACCTaGAGGATGTTGCTGGATGTA +
Preference number: 3 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPVVRKT*RMLLDV
Trigger: TACATCCAGCAACATCCTCAAGGTCTTCCTGACAAC...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp TATATCCTAGGTCAGCACCACGGGCTGCCCTTGTTCTaGACTGGGAGCACTTCCCCCAGTGGAGGATACAGA +
Preference number: 3 (lower is better)
Translates to: YILGQHHGLPLF*TGSTSPSGGYR
Trigger: TCTGTATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCTAGGATATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp AGGTTGAGCATTATTACACAGGTACTCGCAGAGCTATaGTCTGCACACAGAGCCAGGGCTGGCTGGGCGAGA +
Preference number: 3 (lower is better)
Translates to: RLSIITQVLAEL*SAHRARAGWAR
Trigger: TCTCGCCCAGCCAGCCCTGGCTCTGTGTGCAGAGCATAGCTCTGCGAGTACCTGTGTAATAATGCTCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp ATGAGGTATCTCCTCACAGCCCTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGTCCTCTCTCCTGCTAT +
Preference number: 3 (lower is better)
Translates to: MRYLLTALLSSP*VCQLMGPLSCY
Trigger: ATAGCAGGAGAGAGGACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAGGGCTGTGAGGAGATACCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGACAAGCTCAGCACGTaGCGCTCCCAGAACTCGATG +
Preference number: 3 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTDKLST*RSQNSM
Trigger: CATCGAGTTCTGGGAGCGCAACGTGCTGAGCTTGTC...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649500.1
3UTR-3UTR CAA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCAGGGGTCAGCAGGTACTaGACTCTCACAAGGAACGGC +
Preference number: 3 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPGVSRY*TLTRNG
Trigger: GCCGTTCCTTGTGAGAGTCAAGTACCTGCTGACCCC...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACATGGGGCCTATATCCTTaGGTCCACTCACCTCCCCAC +
Preference number: 3 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTWGLYP*VHSPPH
Trigger: GTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCCA...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGCCAGAATGTTGCAATTaGCCTACCAACCCAAAATAC +
Preference number: 3 (lower is better)
Translates to: GDEERKHPSPTPGPSACLPECCN*PTNPKY
Trigger: GTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGG...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGATTGGAGACAGGTGCCTaGGGGAGAGTTGAGGAACGA +
Preference number: 3 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRLETGA*GRVEER
Trigger: TCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCAA...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACCTTTATGTGAAGGGTaGGTTCATTCCTTTGGCATC +
Preference number: 3 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTPLCEG*VHSFGI
Trigger: GATGCCAAAGGAATGAACCAACCCTTCACATAAAGG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAATCTTTAATGAGGGCTaGGCAGGAGTCTCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGIFNEG*AGVSQA
Trigger: AGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGAT...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCTCATTTAGACTGAGCTaGGAAGTGACTGTTCAAATG +
Preference number: 3 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLSFRLS*EVTVQM
Trigger: CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGA...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp ACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCTaGCCTCAATCATTGACAGTGGTTAGTTTACTAAAG +
Preference number: 3 (lower is better)
Translates to: TACQVPSSPRAT*PQSLTVVSLLK
Trigger: CTTTAGTAAACTAACCACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCACCTTTATGTGAAGGGTaGGTTCATTCCTTTGGCATC +
Preference number: 3 (lower is better)
Translates to: IWLAGLCAGISISDPSQAPLCEG*VHSFGI
Trigger: GATGCCAAAGGAATGAACCAACCCTTCACATAAAGG...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGCCTTTATGTGAAGGGTaGGTTCATTCCTTTGGCATC +
Preference number: 3 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMPLCEG*VHSFGI
Trigger: GATGCCAAAGGAATGAACCAACCCTTCACATAAAGG...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCCCTTTATGTGAAGGGTaGGTTCATTCCTTTGGCATC +
Preference number: 3 (lower is better)
Translates to: LARLSCEPHSCQPSWISSPLCEG*VHSFGI
Trigger: GATGCCAAAGGAATGAACCAACCCTTCACATAAAGG...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCAACAAGATAGAATCGTaGAGAGTTTGGAATAGGACT +
Preference number: 3 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLNKIES*RVWNRT
Trigger: AGTCCTATTCCAAACTCTCAACGATTCTATCTTGTT...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACTTTTCCATAAAGGCTaGTCTTTGGTTGTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTLFHKG*SLVVRK
Trigger: CTTCCTGACAACCAAAGACAAGCCTTTATGGAAAAG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGTCAGGGGTACGTACTaGACGAGCGAGAAGATGAAA +
Preference number: 3 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAVRGTY*TSEKMK
Trigger: TTTCATCTTCTCGCTCGTCAAGTACGTACCCCTGAC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAAAGCCCAATGGCCCAGTaGGGGTACACGTATGTTTTG +
Preference number: 3 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKSPMAQ*GYTYVL
Trigger: CAAAACATACGTGTACCCCAACTGGGCCATTGGGCT...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTTCCACAGCCCAGCGGTaGGGTTCCCTTGGGGTCAGC +
Preference number: 3 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVSTAQR*GSLGVS
Trigger: GCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGGA...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR TCA 72 bp TGGATCTCTAGCAGCTCCCTCTCTGGCCAGTGGTTCTaGCGGTCTACTGACTATCCACTCACCATCTCAAAA +
Preference number: 3 (lower is better)
Translates to: WISSSSLSGQWF*RSTDYPLTISK
Trigger: TTTTGAGATGGTGAGTGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGAGAGGGAGCTGCTAGAGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp CTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTTaGCCATTCTCTATAGACAGGTGGACCAGAGTCATG +
Preference number: 3 (lower is better)
Translates to: LTHPKQKAGEGL*PFSIDRWTRVM
Trigger: CATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAAATGCTGAGATGTTGCTaGGGGAATGACCAGAACCTG +
Preference number: 3 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKMLRCC*GNDQNL
Trigger: CAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCAT...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATATGGGGCCTATATCCTTaGGTCCACTCACCTCCCCAC +
Preference number: 3 (lower is better)
Translates to: GDLVCLCLWSRIWSENLIWGLYP*VHSPPH
Trigger: GTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCCA...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAATCTTTAATGAGGGCTaGGCAGGAGTCTCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQIFNEG*AGVSQA
Trigger: AGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGAT...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCATCATTTAGACTGAGCTaGGAAGTGACTGTTCAAATG +
Preference number: 3 (lower is better)
Translates to: IWLAGLCAGISISDPSQASFRLS*EVTVQM
Trigger: CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGA...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGCCCTCCAGAATGTTGCAATTaGCCTACCAACCCAAAATAC +
Preference number: 3 (lower is better)
Translates to: LSYLIYNKGVGLGDPGGPPECCN*PTNPKY
Trigger: GTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGG...AGGGCCTCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTGTGCCTTGGGGAGAGTaGAGGAACGACTTCCTTCCA +
Preference number: 3 (lower is better)
Translates to: LPILYRQVDQSHELSWKVVPWGE*RNDFLP
Trigger: TGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCAC...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCCACCTCTACAAGTTaGGCTCTCTGGGTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAPTSTS*ALWVCF
Trigger: AAAACAAACCCAGAGAGCCAAACTTGTAGAGGTGGG...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp CAGCTCCCTCTCTGGCCAGTGGTTCTGACGGTCTACTaGCTATCCACTCACCATCTCAAAATTAAAAGTGGG +
Preference number: 3 (lower is better)
Translates to: QLPLWPVVLTVY*LSTHHLKIKSG
Trigger: CCCACTTTTAATTTTGAGATGGTGAGTGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGAGAGGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp CTGAGATGTTGCTTGGGGAATGACCAGAACCTGCTATaGCCCCATTCAAATGCAACAGACTCATCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: LRCCLGNDQNLL*PHSNATDSSEP
Trigger: GGGCTCAGATGAGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAACATCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp AGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTaGCTACCAACCCAAAATACTGTGGCCTTTCACCCA +
Preference number: 3 (lower is better)
Translates to: RPSSGHVQNVAI*LPTQNTVAFHP
Trigger: TGGGTGAAAGGCCACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp CAGGCGGGGCCTGGGGACTTGGTCTGCCTGTGTCTTTaGTCTAGAATTTGGTCTGAGAATCTTATAAGAAGA +
Preference number: 3 (lower is better)
Translates to: QAGPGDLVCLCL*SRIWSENLIRR
Trigger: TCTTCTTATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp AGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTaGTATTTACCGTGTCCCAGGCAGCCTGGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: SLVVLYFDFCTQ*YLPCPRQPGLG
Trigger: TCCCAGGCCAGGCTGCCTGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGAGCACAAAGTCGATCTaGCTAGACCACTTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQSTKSI*LDHFSL
Trigger: GAGGGAGAAGTGGTCTAGCAAGATCGACTTTGTGCT...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTGGGGTCAGCAGGTACTaGACTCTCACAAGGAACGGC +
Preference number: 3 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFGVSRY*TLTRNG
Trigger: GCCGTTCCTTGTGAGAGTCAAGTACCTGCTGACCCC...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTATGCTGAGATGTTGCTaGGGGAATGACCAGAACCTG +
Preference number: 3 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTMLRCC*GNDQNL
Trigger: CAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCAT...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCCTAGGCCTTCTCTTTaGGGTCCGCAGGTGGTAAAT +
Preference number: 3 (lower is better)
Translates to: LPILYRQVDQSHELSWKVPRPSL*GPQVVN
Trigger: ATTTACCACCTGCGGACCCAAAAGAGAAGGCCTAGG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGTCATTTAGACTGAGCTaGGAAGTGACTGTTCAAATG +
Preference number: 3 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQSFRLS*EVTVQM
Trigger: CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGA...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAGCGGGGCCTGGGGACTaGGTCTGCCTGTGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQAGPGD*VCLCLW
Trigger: CCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCGC...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGTCTAGTGTATGTGCTTaGTTCTGGGGAGCGTCTAGG +
Preference number: 3 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQSSVCA*FWGASR
Trigger: CCTAGACGCTCCCCAGAACAAAGCACATACACTAGA...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622176.4
3UTR TCA 72 bp CCTTTAGCACCAGGAGGATCTTCAGTGTGGCTACAGTaGGATTATTTGTGTAGTCTAGGTAGGGAGGGCCTA +
Preference number: 3 (lower is better)
Translates to: PLAPGGSSVWLQ*DYLCSLGREGL
Trigger: TAGGCCCTCCCTACCTAGACTACACAAATAATCTCACTGTAGCCACACTGAAGATCCTCCTGGTGCTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610642.4
3UTR TCA 72 bp ATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTaGAGGACTTTGCCCATTCTCTATAGACAGGTGGAC +
Preference number: 3 (lower is better)
Translates to: ISISDPSQAESR*RTLPILYRQVD
Trigger: GTCCACCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CCA 72 bp GCAGGTGAAGGACTTTGCCCATTCTCTATAGACAGGTaGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGT +
Preference number: 3 (lower is better)
Translates to: AGEGLCPFSIDR*TRVMSSHGKFR
Trigger: ACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGACACAGCACCGAAGAATaGCTTTTGAAAATGAGATCT +
Preference number: 3 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGHSTEE*LLKMRS
Trigger: AGATCTCATTTTCAAAAGCAATTCTTCGGTGCTGTG...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGATGCTGAGATGTTGCTaGGGGAATGACCAGAACCTG +
Preference number: 3 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWMLRCC*GNDQNL
Trigger: CAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCAT...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGCCTAGGCCTTCTCTTTaGGGTCCGCAGGTGGTAAAT +
Preference number: 3 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMPRPSL*GPQVVN
Trigger: ATTTACCACCTGCGGACCCAAAAGAGAAGGCCTAGG...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAACCTGCCCTCAATCATaGACAGTGGTTAGTTTACTA +
Preference number: 3 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSATCPQS*TVVSLL
Trigger: TAGTAAACTAACCACTGTCAATGATTGAGGGCAGGT...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGAGCACAAAGTCGATCTaGCTAGACCACTTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: ENKIRYEKRTWCPLMASASTKSI*LDHFSL
Trigger: GAGGGAGAAGTGGTCTAGCAAGATCGACTTTGTGCT...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622176.4
3UTR-3UTR CAA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCTGGGGCCTATATCCTTaGGTCCACTCACCTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVWGLYP*VHSPPH
Trigger: GTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCCA...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCACTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPLHIRP*IKPVLR
Trigger: CCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAG...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTCTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFLHIRP*IKPVLR
Trigger: CCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAG...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp GTATTCCAGGTCCTGCACAACCAAGTTCTGAAACTGTaGAAACATCCAGTCACACCTCACACCTTTAGCACC +
Preference number: 3 (lower is better)
Translates to: VFQVLHNQVLKL*KHPVTPHTFST
Trigger: GGTGCTAAAGGTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACCTGGAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610642.4
3UTR-3UTR CAA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAACTCAAAAGCTGTTCTaGGTGTGCCTTGCTAGGTGC +
Preference number: 3 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLTQKLF*VCLARC
Trigger: GCACCTAGCAAGGCACACCAAGAACAGCTTTTGAGT...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAACCTGCCCTCAATCATaGACAGTGGTTAGTTTACTA +
Preference number: 3 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQTCPQS*TVVSLL
Trigger: TAGTAAACTAACCACTGTCAATGATTGAGGGCAGGT...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp TCATGCTTCATTCCTGCAGGCAACTTTAAGAGATGCTaGGATGTTGCTTGGGGAATGACCAGAACCTGCTAT +
Preference number: 3 (lower is better)
Translates to: SCFIPAGNFKRC*DVAWGMTRTCY
Trigger: ATAGCAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCATCTCTTAAAGTTGCCTGCAGGAATGAAGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp ATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTaGAGAGCTTTGTTATATCCTAGGTCAGCACCACGG +
Preference number: 3 (lower is better)
Translates to: MSVNPAIAGVLK*RALLYPRSAPR
Trigger: CCGTGGTGCTGACCTAGGATATAACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp TGGTACAAGTTTCTACTGCTCTTAGAATCAGACTTCTaGTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCT +
Preference number: 3 (lower is better)
Translates to: WYKFLLLLESDF*YRASSFSFSQS
Trigger: AGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAAGAGCAGTAGAAACTTGTACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp AAAAAGGAGTATTCCAGGTCCTGCACAACCAAGTTCTaGAACTGTGAAAACATCCAGTCACACCTCACACCT +
Preference number: 3 (lower is better)
Translates to: KKEYSRSCTTKF*NCENIQSHLTP
Trigger: AGGTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACCTGGAATACTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610642.4
3UTR CCA 72 bp CATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTaGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAG +
Preference number: 3 (lower is better)
Translates to: HSASASLLYVKG*FIPLASLFFTK
Trigger: CTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGCACAGCACCGAAGAATaGCTTTTGAAAATGAGATCT +
Preference number: 3 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWHSTEE*LLKMRS
Trigger: AGATCTCATTTTCAAAAGCAATTCTTCGGTGCTGTG...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAAACAAGATAGAATCGTaGAGAGTTTGGAATAGGACT +
Preference number: 3 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQNKIES*RVWNRT
Trigger: AGTCCTATTCCAAACTCTCAACGATTCTATCTTGTT...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGACCTGCCCTCAATCATaGACAGTGGTTAGTTTACTA +
Preference number: 3 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQTCPQS*TVVSLL
Trigger: TAGTAAACTAACCACTGTCAATGATTGAGGGCAGGT...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR GCA 72 bp GAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTaGCAGCTACACAGCACCGAAGAATTGCTTTTGAAA +
Preference number: 3 (lower is better)
Translates to: ENSILRLLDRTF*QLHSTEELLLK
Trigger: TTTCAAAAGCAATTCTTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAATGCTGAGATGTTGCTaGGGGAATGACCAGAACCTG +
Preference number: 3 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQMLRCC*GNDQNL
Trigger: CAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCAT...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR TCA 72 bp TCATGGAAAGTTTCGTTTATACGGAGACATGAAGGTTaGGCATTATTACACAGGTACTCGCAGAGCTATGCT +
Preference number: 3 (lower is better)
Translates to: SWKVSFIRRHEG*ALLHRYSQSYA
Trigger: AGCATAGCTCTGCGAGTACCTGTGTAATAATGCTCAACCTTCATGTCTCCGTATAAACGAAACTTTCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAGTTGTCAGGAAGACCTaGAGGATGTTGCTGGATGTA +
Preference number: 3 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQVVRKT*RMLLDV
Trigger: TACATCCAGCAACATCCTCAAGGTCTTCCTGACAAC...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTCACAGCACCGAAGAATaGCTTTTGAAAATGAGATCT +
Preference number: 3 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVHSTEE*LLKMRS
Trigger: AGATCTCATTTTCAAAAGCAATTCTTCGGTGCTGTG...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAAACAAGATAGAATCGTaGAGAGTTTGGAATAGGACT +
Preference number: 3 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPNKIES*RVWNRT
Trigger: AGTCCTATTCCAAACTCTCAACGATTCTATCTTGTT...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCACCTGCCCTCAATCATaGACAGTGGTTAGTTTACTA +
Preference number: 3 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVTCPQS*TVVSLL
Trigger: TAGTAAACTAACCACTGTCAATGATTGAGGGCAGGT...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR-3UTR CAA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAACACAGCACCGAAGAATaGCTTTTGAAAATGAGATCT +
Preference number: 3 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQHSTEE*LLKMRS
Trigger: AGATCTCATTTTCAAAAGCAATTCTTCGGTGCTGTG...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGCGTCCTCAGGCCGCGTaGCTGGGCTCTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TSCCLETPRRASGSVWSQRPQAA*LGSSLV
Trigger: CACCAGGGAAGAGCCCAGGCACGCGGCCTGAGGACG...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCTGGATCTGGGGTGGCTaGGGCGCCGCCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAWIWGG*GAARAL
Trigger: CAGAGCGCGGGCGGCGCCGCAGCCACCCCAGATCCA...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCCGTTCTGGATCTGGGGTaGCTGCGGCGCCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SPEDSGSCIPGEEIRKWAVLDLG*LRRRPR
Trigger: GCGCGGGCGGCGCCGCAGCCACCCCAGATCCAGAAC...GGCCCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR GCA 90 bp CACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGTGGATCTGGGGTGGCTaGGGCGCCGCCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: HSPEDSGSCIPGEEIRKWWIWGG*GAARAL
Trigger: CAGAGCGCGGGCGGCGCCGCAGCCACCCCAGATCCA...CCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGCTCACCAAGGGCTGCTaGGAGGAAGGAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWLTKGC*EEGGPR
Trigger: ACGGGGCCCTCCTTCCTCCCAGCAGCCCTTGGTGAG...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGCGTCCTCAGGCCGCGTaGCTGGGCTCTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSHSPEDSGSCIPGEEIRRPQAA*LGSSLV
Trigger: CACCAGGGAAGAGCCCAGGCACGCGGCCTGAGGACG...CCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR GCA 90 bp CTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCCTTGTCCTCTGGGCTTaGGGTCCTCGGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: LPRRQWLLYPRGGDKEVGLVLWA*GPRGSA
Trigger: CGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAG...GCCCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR GCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCCTTGTCCTCTGGGCTTaGGGTCCTCGGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLALVLWA*GPRGSA
Trigger: CGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAG...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGCTCCGCACTCCCTCTTaGCGCAGCTTGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWLRTPS*RSLSSG
Trigger: CCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAG...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGGTTCTGGATCTGGGGTaGCTGCGGCGCCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMVLDLG*LRRRPR
Trigger: GCGCGGGCGGCGCCGCAGCCACCCCAGATCCAGAAC...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCGTTCTGGATCTGGGGTaGCTGCGGCGCCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSVLDLG*LRRRPR
Trigger: GCGCGGGCGGCGCCGCAGCCACCCCAGATCCAGAAC...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGGGGCTGCCCTTGTTCTaGACTGGGAGCACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWGLPLF*TGSTSP
Trigger: GGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCC...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGCACCCCTCGAGGCAGTaGCTGCCTTTGTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWHPSRQ*LPLCVV
Trigger: GACCACGCACAAAGGCAGTCACTGCCTCGAGGGGTG...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATGGATCCAGGGGGCAGTaGAGGAGCTGCACATGGCCC +
Preference number: 4 (lower is better)
Translates to: STTGCPCSELGALPPVEDGSRGQ*RSCTWP
Trigger: GGGCCATGTGCAGCTCCTTCACTGCCCCCTGGATCC...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACGTCCTCAGGCCGCGTaGCTGGGCTCTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTRPQAA*LGSSLV
Trigger: CACCAGGGAAGAGCCCAGGCACGCGGCCTGAGGACG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCGGAAAGGGGGAGGGCTaGCCCCTGCTTTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCGKGEG*PLLSGL
Trigger: CAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCTTTCC...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGCTCGGGGCTCGGCGTTaGCGGCGGCGCGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQLGARR*RRREGS
Trigger: GCTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAG...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGCGCAGCTTGTCCTCTaGGCTTGCGGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PLPRRQWLLYPRGGDKEVAQLVL*ACGPRG
Trigger: GCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGC...CACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCTCCGCACTCCCTCTTaGCGCAGCTTGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCLRTPS*RSLSSG
Trigger: CCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAG...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCTTCTGGTTCTGGATCTaGGGTGGCTGCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGFWFWI*GGCGAA
Trigger: GGCGGCGCCGCAGCCACCCCAGATCCAGAACCAGAA...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGTTCTGGTTCTGGATCTaGGGTGGCTGCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SSHSPEDSGSCIPGEEIRFWFWI*GGCGAA
Trigger: GGCGGCGCCGCAGCCACCCCAGATCCAGAACCAGAA...CCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCCAAATAGGGGCTGGGTaGGGGTGTGTCTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TNAQVATACQVPSSPRATQIGAG*GCVCPG
Trigger: CCCAGGGCAGACACACCCCCACCCAGCCCCTATTTG...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGCAAATAGGGGCTGGGTaGGGGTGTGTCTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWQIGAG*GCVCPG
Trigger: CCCAGGGCAGACACACCCCCACCCAGCCCCTATTTG...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGGCCTCGGGGTCAGTCTaGAGCCAGGGCGACTTCATC +
Preference number: 4 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWASGSV*SQGDFI
Trigger: GATGAAGTCGCCCTGGCTCCAGACTGACCCCGAGGC...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGCCACTTCCTGCTGCCTaGAAACTCCCCGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TSCCLETPRRASGSVWSQPLPAA*KLPAEP
Trigger: AGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGG...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCGGTGGGGGACCAGTGTaGCGGTACCCGGGTGATACA +
Preference number: 4 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLGGGPV*RYPGDT
Trigger: TGTATCACCCGGGTACCGCCACACTGGTCCCCCACC...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCCCAGGCAGCCTGGCCTaGGACCACATGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGPGSLA*DHMGLR
Trigger: CCTCAGACCCATGTGGTCCCAGGCCAGGCTGCCTGG...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGATGGATCTGGGGTGGCTaGGGCGCCGCCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGWIWGG*GAARAL
Trigger: CAGAGCGCGGGCGGCGCCGCAGCCACCCCAGATCCA...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGCCCCTCTTCCCCACGTaGCACCTGCCCTCAATCATT +
Preference number: 4 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWPLFPT*HLPSII
Trigger: AATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGG...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTCTCGGGGCTCGGCGTTaGCGGCGGCGCGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLLGARR*RRREGS
Trigger: GCTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAG...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCCTCCGCACTCCCTCTTaGCGCAGCTTGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPRRQWLLYPRGGDKEVGLRTPS*RSLSSG
Trigger: CCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAG...GCCCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTGTTCTGGATCTGGGGTaGCTGCGGCGCCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLVLDLG*LRRRPR
Trigger: GCGCGGGCGGCGCCGCAGCCACCCCAGATCCAGAAC...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGCTGTGGTTCTGGTTCTaGATCTGGGGTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GDEERKHPSPTPGPSACLLWFWF*IWGGCG
Trigger: GCCGCAGCCACCCCAGATCCAGAACCAGAACCACAG...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCGCCTCGGGGTCAGTCTaGAGCCAGGGCGACTTCATC +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAASGSV*SQGDFI
Trigger: GATGAAGTCGCCCTGGCTCCAGACTGACCCCGAGGC...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCGGTGGGGGACCAGTGTaGCGGTACCCGGGTGATACA +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAGGGPV*RYPGDT
Trigger: TGTATCACCCGGGTACCGCCACACTGGTCCCCCACC...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCTTGTGTCTGAATCTTaGGTGGGGTGGGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCLVSES*VGWAAG
Trigger: CCCCGCAGCCCACCCCACCCAAGATTCAGACACAAG...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCGGCCAGGCCAGGACCTaGCTCAGCCACATCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGGQART*LSHISN
Trigger: ATTGCTGATGTGGCTGAGTCAGGTCCTGGCCTGGCC...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCCGAGAGCGCCGTTCATaGCGGTGCGAGAGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLRERRS*RCESCK
Trigger: CTTACAACTCTCGCACCGTCATGAACGGCGCTCTCG...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCTGGGCGAGAGGGCTCTaGTTGGAGACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAWARGL*LETGAL
Trigger: CAAGGCACCTGTCTCCAATCAGAGCCCTCTCGCCCA...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCTTCCTGGCTTGTGTCTaGATCTTGGGTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLFLACV*ILGGVG
Trigger: GCCCACCCCACCCAAGATTCAGACACAAGCCAGGAA...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCTTCCTGGCTTGTGTCTaGATCTTGGGTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCFLACV*ILGGVG
Trigger: GCCCACCCCACCCAAGATTCAGACACAAGCCAGGAA...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGTGGGCCATCCTCTCTaGCCCACCCATGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HSPEDSGSCIPGEEIRKWVGHPL*PTHVLL
Trigger: GAGGAGGACATGGGTGGGGCAGAGAGGATGGCCCAC...CCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR GCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTGGAGGGGCCATGCTGTaGTCTCCCCTTGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPGGAML*SPLVFP
Trigger: GGGAAACACAAGGGGAGAGCACAGCATGGCCCCTCC...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACAGGAAAGGGGGAGGGCTaGCCCCTGCTTTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTGKGEG*PLLSGL
Trigger: CAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCTTTCC...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCTTCTGGTTCTGGATCTaGGGTGGCTGCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIFWFWI*GGCGAA
Trigger: GGCGGCGCCGCAGCCACCCCAGATCCAGAACCAGAA...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGCTGTGGTTCTGGTTCTaGATCTGGGGTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SSHSPEDSGSCIPGEEIRLWFWF*IWGGCG
Trigger: GCCGCAGCCACCCCAGATCCAGAACCAGAACCACAG...CCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp GCACCCTCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGTCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: APSSHSPEDSGSCIPGEESSEGL*FWFWIW
Trigger: CCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGA...CTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGAGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp TCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGCTCCCCCGAAGACAGTaGCTCCTGTATCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SSHSPEDSGSCIPGEEIRLPRRQ*LLYPRG
Trigger: TCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAG...CCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATCCACTTCCTGCTGCCTaGAAACTCCCCGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: STTGCPCSELGALPPVEDPLPAA*KLPAEP
Trigger: AGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGG...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTCTTGTGTCTGAATCTTaGGTGGGGTGGGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPLVSES*VGWAAG
Trigger: CCCCGCAGCCCACCCCACCCAAGATTCAGACACAAG...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCGGGCTGCCCTTGTTCTaGACTGGGAGCACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSGLPLF*TGSTSP
Trigger: GGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCC...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATGAGGGGCCAGGACCCTaGCAATCCCAACCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: STTGCPCSELGALPPVEDEGPGP*QSQPSR
Trigger: TCTAGAAGGTTGGGATTGTCAGGGTCCTGGCCCCTC...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCACACCCCTCGAGGCAGTaGCTGCCTTTGTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: IWLAGLCAGISISDPSQAHPSRQ*LPLCVV
Trigger: GACCACGCACAAAGGCAGTCACTGCCTCGAGGGGTG...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGGCTGAAACACATACATaGCACCCTCCGTCACCATCG +
Preference number: 4 (lower is better)
Translates to: TSCCLETPRRASGSVWSQAETHT*HPPSPS
Trigger: CGATGGTGACGGAGGGTGGCATGTATGTGTTTCAGC...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCCCGGGCCCATCTGCATaGCTGGGGCCTATATCCTTT +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAPGPSA*LGPISF
Trigger: AAAGGATATAGGCCCCAGGCATGCAGATGGGCCCGG...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATGTCAGCACCACGGGCTaGCCTTGTTCTGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: STTGCPCSELGALPPVEDVSTTG*PCSELG
Trigger: TCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGAC...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCGTCAGCACCACGGGCTaGCCTTGTTCTGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAVSTTG*PCSELG
Trigger: TCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGAC...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGGAAAATTCTGCGGTCTaGACCCCTCGAGGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GDEERKHPSPTPGPSACLENSAV*TPRGSD
Trigger: GTCACTGCCTCGAGGGGTGCAGACCGCAGAATTTTC...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCGATGGGGTTCAGAATTaGCCCTTGGGAGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGDGVQN*PLGGGH
Trigger: GTGTCCCCCTCCCAAGGGGCAATTCTGAACCCCATC...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGGTACTCGCAGAGCTATaGTCTGCACACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GDEERKHPSPTPGPSACLVLAEL*SAHRAR
Trigger: CCTGGCTCTGTGTGCAGAGCATAGCTCTGCGAGTAC...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATAAGGCCACTTCCTGCTaGCTGGAAACTCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: STTGCPCSELGALPPVEDKATSC*LETPRR
Trigger: TCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTT...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGTTGGGTGGGGTGGGCTaGGGGGAGCAGTTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: VRHSPFPAPTSENLQLELLGGVG*GEQLGA
Trigger: GGCACCTAACTGCTCCCCGCAGCCCACCCCACCCAA...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCGGAAAGGGGGAGGGCTaGCCCCTGCTTTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIGKGEG*PLLSGL
Trigger: CAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCTTTCC...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTACTCCGCACTCCCTCTTaGCGCAGCTTGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLLRTPS*RSLSSG
Trigger: CCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAG...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCGCAGCACCAGGAGCATaGCGAATGGAAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLAAPGA*RMEKWL
Trigger: CAGCCACTTTTCCATTCGCCATGCTCCTGGTGCTGC...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGT +
Preference number: 4 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCLLSSP*VCQLMG
Trigger: ACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAG...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGGCCCATCTGCATGCCTaGGGCCTATATCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWAHLHA*GLYPLV
Trigger: GACCAAAGGATATAGGCCCCAGGCATGCAGATGGGC...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCTTCCTTTCCAGATCTaGCTGGCTGGGCTATGTGCG +
Preference number: 4 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCLPFQI*LAGLCA
Trigger: CGCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAG...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCCTCACCAAGGGCTGCTaGGAGGAAGGAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFLTKGC*EEGGPR
Trigger: ACGGGGCCCTCCTTCCTCCCAGCAGCCCTTGGTGAG...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCATGCCCTGAAGTGGGCTaGAGGGGCCATGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: IWLAGLCAGISISDPSQACPEVG*RGHAVL
Trigger: GAGCACAGCATGGCCCCTCCAGCCCACTTCAGGGCA...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGTGTGCTGGGAGATGCTaGCTGGGTGGGGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWCAGRC*LGGGPV
Trigger: CACTGGTCCCCCACCCAGCCAGCATCTCCCAGCACA...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCGGTCCTCAAGGCGGGTaGTGTCAGGATACAGATAGA +
Preference number: 4 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCGPQGG*CQDTDR
Trigger: TCTATCTGTATCCTGACATCACCCGCCTTGAGGACC...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACGAGAGCGCCGTTCATaGCGGTGCGAGAGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTRERRS*RCESCK
Trigger: CTTACAACTCTCGCACCGTCATGAACGGCGCTCTCG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGTGCGAGGCTGAGTTGTaGGCCTCACTCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQCEAEL*ASLLPA
Trigger: GGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCA...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCTGCGAGGCTGAGTTGTaGGCCTCACTCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFCEAEL*ASLLPA
Trigger: GGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCA...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGGGGCTGCCCTTGTTCTaGACTGGGAGCACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQGLPLF*TGSTSP
Trigger: GGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCC...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGCACCCCTCGAGGCAGTaGCTGCCTTTGTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQHPSRQ*LPLCVV
Trigger: GACCACGCACAAAGGCAGTCACTGCCTCGAGGGGTG...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTCAAGAGCCCCTGCTGTaGAAATTCTGCGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPQEPLL*KFCGLH
Trigger: GTGCAGACCGCAGAATTTTCACAGCAGGGGCTCTTG...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCTGCCTTGGGGAGAGTTaGGGAACGACTTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGCLGES*GTTSFQ
Trigger: CTGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCA...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGGATACAAGAGTGCCCTaGAGTGGGCTGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWDTRVP*SGLEGP
Trigger: TGGCCCCTCCAGCCCACTTCAGGGCACTCTTGTATC...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGATACAAGAGTGCCCTaGAGTGGGCTGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLDTRVP*SGLEGP
Trigger: TGGCCCCTCCAGCCCACTTCAGGGCACTCTTGTATC...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCCCAGCCCAATGGCCCAGTTGGGGTACACGTATGTTTTGTTGTAGGTCAGGGGGTGGCGGTACCCGGGTaGTACAAGAGTGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: AQPNGPVGVHVCFVVGQGVAVPG*YKSALK
Trigger: CTTCAGGGCACTCTTGTATCACCCGGGTACCGCCAC...CCCCTGACCTACAACAAAACATACGTGTACCCCAACTGGGCCATTGGGCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACTGGATCTGGGGTGGCTaGGGCGCCGCCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHWIWGG*GAARAL
Trigger: CAGAGCGCGGGCGGCGCCGCAGCCACCCCAGATCCA...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR GCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTAAGCTGTTCTTGGTGTaGCTTGCTAGGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPKLFLV*LARCQG
Trigger: GCCCTGGCACCTAGCAAGGCACACCAAGAACAGCTT...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACCCCTCTTCCCCACGTaGCACCTGCCCTCAATCATT +
Preference number: 4 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTPLFPT*HLPSII
Trigger: AATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCCCTGGGGACTTGGTCTaGCTGTGTCTTTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLPGDLV*LCLWSR
Trigger: TCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGG...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GCCCAGCCCAATGGCCCAGTTGGGGTACACGTATGTTTTGTTGTAGGTCAGGGGCGCAGAGCTATGCTCTaGACACAGAGCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQPNGPVGVHVCFVVGQGRRAML*TQSQGW
Trigger: CCAGCCCTGGCTCTGTGTGCAGAGCATAGCTCTGCG...CCCCTGACCTACAACAAAACATACGTGTACCCCAACTGGGCCATTGGGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTATGGCCCAGGGGTTATaGTGTCCTGGAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPMAQGL*CPGRRA
Trigger: TGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCAT...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCCCCTGCTTTCTGGACTaGCCACCTCTACAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLPCFLD*PPLQVW
Trigger: CCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGG...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCGGGAGGGCTGCCCCCTaGTTTCTGGACTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTGRAAP*FLDCPP
Trigger: AGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCC...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACCTCGGGGCTCGGCGTTaGCGGCGGCGCGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHLGARR*RRREGS
Trigger: GCTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAG...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGCTCGGGGCTCGGCGTTaGCGGCGGCGCGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQLGARR*RRREGS
Trigger: GCTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAG...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGTTCTGGATCTGGGGTaGCTGCGGCGCCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHVLDLG*LRRRPR
Trigger: GCGCGGGCGGCGCCGCAGCCACCCCAGATCCAGAAC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTTTCTGGTTCTGGATCTaGGGTGGCTGCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPFWFWI*GGCGAA
Trigger: GGCGGCGCCGCAGCCACCCCAGATCCAGAACCAGAA...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCGCCATCTCCTTGGTTTaGGAGCTCCTCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAAISLV*ELLRRA
Trigger: AGCCCTTCTGAGGAGCTCCCAAACCAAGGAGATGGC...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGGAGCACTTCCCCCAGTaGAGGATACAGACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWEHFPQ*RIQTQK
Trigger: CTTTTGAGTCTGTATCCTCCACTGGGGGAAGTGCTC...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATTTCAGAATTGCCCCTTaGGAGGGGGACACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: STTGCPCSELGALPPVEDFRIAP*EGDTKG
Trigger: GCCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAA...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCCCAGATCTGGCTGGCTaGGCTATGTGCGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSPDLAG*AMCGHQ
Trigger: CTGATGCCCGCACATAGCCCAGCCAGCCAGATCTGG...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTGGGGTTATGCTGTCCTaGAAGGAGAGCATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPGVMLS*KESIQG
Trigger: GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCC...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGGTTCTGACGGTCTACTaGCTATCCACTCACCATCTC +
Preference number: 4 (lower is better)
Translates to: GDEERKHPSPTPGPSACLVLTVY*LSTHHL
Trigger: GAGATGGTGAGTGGATAGTCAGTAGACCGTCAGAAC...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTACACCTCTTGCGAGGCTaGGTTGTGAGCCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLHLLRG*VVSLTP
Trigger: AGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTG...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCCCAGCCCAATGGCCCAGTTGGGGTACACGTATGTTTTGTTGTAGGTCAGGGGGAGGGGCCAGGACCCTaGCAATCCCAACCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: AQPNGPVGVHVCFVVGQGEGPGP*QSQPSR
Trigger: TCTAGAAGGTTGGGATTGTCAGGGTCCTGGCCCCTC...CCCCTGACCTACAACAAAACATACGTGTACCCCAACTGGGCCATTGGGCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGATGGGGTTCAGAATTaGCCCTTGGGAGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: IWLAGLCAGISISDPSQADGVQN*PLGGGH
Trigger: GTGTCCCCCTCCCAAGGGGCAATTCTGAACCCCATC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCCCCCTCTTCCCCACGTaGCACCTGCCCTCAATCATT +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSPLFPT*HLPSII
Trigger: AATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGG...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGCGCAGAGCTATGCTCTaGACACAGAGCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VRHSPFPAPTSENLQLELRRAML*TQSQGW
Trigger: CCAGCCCTGGCTCTGTGTGCAGAGCATAGCTCTGCG...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCATTCCTGGCTCACAGTaGCTCCCTGAGCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAIPGSQ*LPEPQL
Trigger: TAACTGAGGCTCAGGGAGGCACTGTGAGCCAGGAAT...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTACACTCACCATTCCCTaGACCTACCTCGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPTLTIP*TYLGEP
Trigger: AGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGT...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGAAGGCCACTTCCTGCTaGCTGGAAACTCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWKATSC*LETPRR
Trigger: TCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTT...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCCCCTGCTTTCTGGACTaGCCACCTCTACAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGPCFLD*PPLQVW
Trigger: CCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGG...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGGCCCAATGGCCCAGTTaGGGTACACGTATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GDEERKHPSPTPGPSACLAQWPS*GTRMFC
Trigger: ACAAAACATACGTGTACCCCAACTGGGCCATTGGGC...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAGCGCAGCTTGTCCTCTaGGCTTGCGGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGAQLVL*ACGPRG
Trigger: GCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGC...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTTGGTGGCCATCTCCTTaGTTTGGGAGCTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPWWPSP*FGSSSE
Trigger: TTCTGAGGAGCTCCCAAACCAAGGAGATGGCCACCA...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGT +
Preference number: 4 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTLLSSP*VCQLMG
Trigger: ACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCCCAGCCCAATGGCCCAGTTGGGGTACACGTATGTTTTGTTGTAGGTCAGGGGGGGGCCTATATCCTTTaGTCCACTCACCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: AQPNGPVGVHVCFVVGQGGAYIL*STHLPT
Trigger: GGTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCC...CCCCTGACCTACAACAAAACATACGTGTACCCCAACTGGGCCATTGGGCTGGGC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCGCCCTTGTTCTGAACTaGGAGCACTTCCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSALVLN*EHFPQW
Trigger: CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGC...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGGCCCTTGTTCTGAACTaGGAGCACTTCCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMALVLN*EHFPQW
Trigger: CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGC...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGGACTGCCTTTGTGCGTaGTCACGTTTCGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWDCLCA*SRFGFI
Trigger: AATGAAACCGAAACGTGACCACGCACAAAGGCAGTC...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGCGAGAGGGCTCTGATTaGAGACAGGTGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMREGSD*RQVPWG
Trigger: TCCCCAAGGCACCTGTCTCCAATCAGAGCCCTCTCG...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACATCTGTGGCCCTAGCATaGCCCATCTCAACGCAGTGT +
Preference number: 4 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTSVALA*PISTQC
Trigger: ACACTGCGTTGAGATGGGCCATGCTAGGGCCACAGA...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCACTCACCAAGGGCTGCTaGGAGGAAGGAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPLTKGC*EEGGPR
Trigger: ACGGGGCCCTCCTTCCTCCCAGCAGCCCTTGGTGAG...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGATGCCCTGAAGTGGGCTaGAGGGGCCATGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGCPEVG*RGHAVL
Trigger: GAGCACAGCATGGCCCCTCCAGCCCACTTCAGGGCA...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACATGCGAGGCTGAGTTGTaGGCCTCACTCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTCEAEL*ASLLPA
Trigger: GGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCA...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCACAAGAGCCCCTGCTGTaGAAATTCTGCGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: IWLAGLCAGISISDPSQAQEPLL*KFCGLH
Trigger: GTGCAGACCGCAGAATTTTCACAGCAGGGGCTCTTG...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAAGGATCCAGGGGGCAGTaGAGGAGCTGCACATGGCCC +
Preference number: 4 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKGSRGQ*RSCTWP
Trigger: GGGCCATGTGCAGCTCCTTCACTGCCCCCTGGATCC...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACCGTCCTCAGGCCGCGTaGCTGGGCTCTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHRPQAA*LGSSLV
Trigger: CACCAGGGAAGAGCCCAGGCACGCGGCCTGAGGACG...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR GCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGCGTCCTCAGGCCGCGTaGCTGGGCTCTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQRPQAA*LGSSLV
Trigger: CACCAGGGAAGAGCCCAGGCACGCGGCCTGAGGACG...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACCTTGTCCTCTGGGCTTaGGGTCCTCGGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHLVLWA*GPRGSA
Trigger: CGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAG...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR GCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTCTTGTCCTCTGGGCTTaGGGTCCTCGGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVLVLWA*GPRGSA
Trigger: CGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAG...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGCTTGTCCTCTGGGCTTaGGGTCCTCGGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQLVLWA*GPRGSA
Trigger: CGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAG...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGTGGATCTGGGGTGGCTaGGGCGCCGCCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: ENKIRYEKRTWCPLMASAWIWGG*GAARAL
Trigger: CAGAGCGCGGGCGGCGCCGCAGCCACCCCAGATCCA...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR GCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCAATAGAACTTGATGCCTaGGCCCGCGCCCGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPIELDA*ARARQR
Trigger: ACGCTGCCGGGCGCGGGCGCAGGCATCAAGTTCTAT...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAATAGAACTTGATGCCTaGGCCCGCGCCCGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTIELDA*ARARQR
Trigger: ACGCTGCCGGGCGCGGGCGCAGGCATCAAGTTCTAT...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGTCTTCCCCCTGGGTCTaGCAGCTAATGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQSSPWV*QLMGPL
Trigger: GAGAGGACCCATTAGCTGGCAGACCCAGGGGGAAGA...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ACTTCCTGCTGCCTGGAAACTCCCCGCAGAGCCTCGGGGTCAGTCTGGAGCCAGGGAATGACCAGAACCTaGTATGACCCCATTCAAATG +
Preference number: 4 (lower is better)
Translates to: TSCCLETPRRASGSVWSQGMTRT*YDPIQM
Trigger: CATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCC...CTGGCTCCAGACTGACCCCGAGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGACACCGGGCCCATCTaGATGCCTGGGGCCTATATC +
Preference number: 4 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGDTGPI*MPGAYI
Trigger: GATATAGGCCCCAGGCATGCAGATGGGCCCGGTGTC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGACAGGTAGCCACTGCGTaGCAAGTCCCCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGQVATA*QVPSSP
Trigger: TGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTG...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGATGCCCAGGTAGCCACTaGGTGCCAAGTCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRCPGSH*VPSPLF
Trigger: GAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCA...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCTGCCCAGGTAGCCACTaGGTGCCAAGTCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTCPGSH*VPSPLF
Trigger: GAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCA...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCGCAGGTGAAGGACTTTaGCCATTCTCTATAGACAGG +
Preference number: 4 (lower is better)
Translates to: TNAQVATACQVPSSPRATAGEGL*PFSIDR
Trigger: CCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGC...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCAGGGCTGGAGGGGCCATaGTGTGCTCTCCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPGLEGP*CALPLC
Trigger: ACACAAGGGGAGAGCACAGCATGGCCCCTCCAGCCC...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGCGGGTGATACAAGAGTaGCCTGAAGTGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQRVIQE*PEVGWR
Trigger: CCTCCAGCCCACTTCAGGGCACTCTTGTATCACCCG...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGACTGCAGCTTCTCCTTaGTGGCCATCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSHSPEDSGSCIPGEEIRTAASP*WPSPCF
Trigger: AAAGCAAGGAGATGGCCACCAAGGAGAAGCTGCAGT...CCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp CAGAACTGGGATTCCAGTCCTGTCTATGGCCAAAGGCATAAATTTATCTCCAGACTCGGGGCTCGGCGTTaGCGGCGGCGCGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QNWDSSPVYGQRHKFISRLGARR*RRREGS
Trigger: GCTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAG...TCTGGAGATAAATTTATGCCTTTGGCCATAGACAGGACTGGAATCCCAGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGCTCGGGGCTCGGCGTTaGCGGCGGCGCGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQLGARR*RRREGS
Trigger: GCTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAG...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGCGCAGCTTGTCCTCTaGGCTTGCGGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHAQLVL*ACGPRG
Trigger: GCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGGCGCAGCTTGTCCTCTaGGCTTGCGGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: KIPSCVYWTELSASYTAPAQLVL*ACGPRG
Trigger: GCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGC...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGGTTCTGGATCTGGGGTaGCTGCGGCGCCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ENKIRYEKRTWCPLMASAVLDLG*LRRRPR
Trigger: GCGCGGGCGGCGCCGCAGCCACCCCAGATCCAGAAC...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CCA 90 bp CTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCCTTGCTTCAATGAGGTaGCCTTACTCCCAGAACTCG +
Preference number: 4 (lower is better)
Translates to: LPRRQWLLYPRGGDKEVGLASMR*PYSQNS
Trigger: CGAGTTCTGGGAGTAAGGCCACCTCATTGAAGCAAG...GCCCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCACTGCAGCTTCTCCTTaGTGGCCATCTCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLATAASP*WPSPWF
Trigger: AAACCAAGGAGATGGCCACCAAGGAGAAGCTGCAGT...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CCA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCGCCCTTGTTCTGAACTaGGAGCACTTCCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFALVLN*EHFPQW
Trigger: CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGC...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGCACGGAGCCACCGCATaGGTCCAGGAATTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQHGATA*VQEFCE
Trigger: CTCACAGAATTCCTGGACCCATGCGGTGGCTCCGTG...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
3UTR CAA 72 bp CTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGGGGCCAGGACCCTGAC +
Preference number: 4 (lower is better)
Translates to: LVQRQPLLHIRP*IKPVLRGQDPD
Trigger: GTCAGGGTCCTGGCCCCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCATGGGCGAGAGGGCTCTaGTTGGAGACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAWARGL*LETGAL
Trigger: CAAGGCACCTGTCTCCAATCAGAGCCCTCTCGCCCA...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGCCCTAGGCCCTTCTCTCCCTaGCCGTCAGGAAATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSYLIYNKGVGLGDPGGPRPFSP*PSGNLC
Trigger: ACAGAGATTTCCTGACGGTCAGGGAGAGAAGGGCCT...AGGGCCTCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGTGGCGGTACCCGGGTaGTACAAGAGTGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAVAVPG*YKSALK
Trigger: CTTCAGGGCACTCTTGTATCACCCGGGTACCGCCAC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAGGGACCACATGGGTCTaGGGGAGGGATGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGGTTWV*GRDGTS
Trigger: TGAGGTCCCATCCCTCCCTCAGACCCATGTGGTCCC...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CAGGTGGTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCCGTCCTCAGGCCGCGTaGCTGGGCTCTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QVVNVCKPSYCRGFEVKSRPQAA*LGSSLV
Trigger: CACCAGGGAAGAGCCCAGGCACGCGGCCTGAGGACG...GCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTACCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGGCTGAAACACATACATaGCACCCTCCGTCACCATCG +
Preference number: 4 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWAETHT*HPPSPS
Trigger: CGATGGTGACGGAGGGTGGCATGTATGTGTTTCAGC...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCTCTTCCCCCTGGGTCTaGCAGCTAATGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCSSPWV*QLMGPL
Trigger: GAGAGGACCCATTAGCTGGCAGACCCAGGGGGAAGA...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCTGTGAGCCTCACTCCTaGCAGCCTTCTTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSCEPHS*QPSWIS
Trigger: AGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACA...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCCACCTCTGGCTTCTCTaGACCTCAGTTCCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSHLWLL*TSVPSF
Trigger: GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTG...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CCCAGGAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGGGAGGGCTGCCCCCTaGTTTCTGGACTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: PRKIPSCVYWTELSASYTGRAAP*FLDCPP
Trigger: AGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCC...TGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGTTCTGGTTCTGGATCTaGGGTGGCTGCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQFWFWI*GGCGAA
Trigger: GGCGGCGCCGCAGCCACCCCAGATCCAGAACCAGAA...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGTCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWSSEGL*FWFWIW
Trigger: CCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGA...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGTCTCCTTGCTTTGTTTaGGAGCTCCTCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: HSPEDSGSCIPGEEIRKWSPCFV*ELLRRA
Trigger: AGCCCTTCTGAGGAGCTCCCAAACAAAGCAAGGAGA...CCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp CACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCAGCTTCTCCTTGGTaGCCATCTCCTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: HSPEDSGSCIPGEEIRKWAASPW*PSPCFV
Trigger: AACAAAGCAAGGAGATGGCCACCAAGGAGAAGCTGC...CCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCGCAGCACCAGGAGCATaGCGAATGGAAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFAAPGA*RMEKWL
Trigger: CAGCCACTTTTCCATTCGCCATGCTCCTGGTGCTGC...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCGTCTGCCTGTGTCTTTaGTCTAGAATTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLVCLCL*SRIWSE
Trigger: CTCAGACCAAATTCTAGACCAAAGACACAGGCAGAC...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCACGGGGCCTGGGGACTTaGTCTGCCTGTGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPRGLGT*SACVFG
Trigger: ACCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCG...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCGAGAGGGCTCTGATTaGAGACAGGTGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPREGSD*RQVPWG
Trigger: TCCCCAAGGCACCTGTCTCCAATCAGAGCCCTCTCG...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGTCTGTGGCCCTAGCATaGCCCATCTCAACGCAGTGT +
Preference number: 4 (lower is better)
Translates to: VRHSPFPAPTSENLQLELSVALA*PISTQC
Trigger: ACACTGCGTTGAGATGGGCCATGCTAGGGCCACAGA...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCTCCTGCCTAAGGATCTaGCACACCTCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSSCLRI*HTSGFS
Trigger: AGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGA...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCACCTCTGCCTTTAGACTaGCTACCCAGAGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: IWLAGLCAGISISDPSQAPLPLD*LPRAFP
Trigger: GGGAAATGCTCTGGGTAGCCAGTCTAAAGGCAGAGG...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CCCAGGAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACACCAGGCAGCCTGGCCTaGGACCACATGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PRKIPSCVYWTELSASYTPGSLA*DHMGLR
Trigger: CCTCAGACCCATGTGGTCCCAGGCCAGGCTGCCTGG...TGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGGATTTTTGCACACAGTaGTATTTACCGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWDFCTQ*YLPCPR
Trigger: CCTGGGACACGGTAAATACCACTGTGTGCAAAAATC...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
3UTR CAA 72 bp GGAGGATACAGACTCAAAAGCTGTTCTTGGTGTGCCTaGCTAGGTGCCAGGGCAGCCCAGGGTGGCATCTTT +
Preference number: 4 (lower is better)
Translates to: GGYRLKSCSWCA*LGARAAQGGIF
Trigger: AAAGATGCCACCCTGGGCTGCCCTGGCACCTAGCAAGGCACACCAAGAACAGCTTTTGAGTCTGTATCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACGCGTGTCTGTTGTCTaGGCAGGCAGCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSARVSVV*AGSSQH
Trigger: ATGCTGAGAGCTGCCTGCTCAGACAACAGACACGCG...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCATCATGGTCTCCACAATaGTGTGGGTCGGTTTCACGA +
Preference number: 4 (lower is better)
Translates to: IWLAGLCAGISISDPSQASWSPQ*CGSVSR
Trigger: TCGTGAAACCGACCCACATCATTGTGGAGACCATGA...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGATGGGCGAGAGGGCTCTaGTTGGAGACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGWARGL*LETGAL
Trigger: CAAGGCACCTGTCTCCAATCAGAGCCCTCTCGCCCA...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACATTCCTGGCTTGTGTCTaGATCTTGGGTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTFLACV*ILGGVG
Trigger: GCCCACCCCACCCAAGATTCAGACACAAGCCAGGAA...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGTGTATACTGCAAGACTaGACTACACACCAAGGATCT +
Preference number: 4 (lower is better)
Translates to: GDEERKHPSPTPGPSACLCILQD*TTHQGS
Trigger: AGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACA...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTTGGATCTGGGGTGGCTaGGGCGCCGCCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVWIWGG*GAARAL
Trigger: CAGAGCGCGGGCGGCGCCGCAGCCACCCCAGATCCA...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTATAGAACTTGATGCCTaGGCCCGCGCCCGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVIELDA*ARARQR
Trigger: ACGCTGCCGGGCGCGGGCGCAGGCATCAAGTTCTAT...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGCTGGACAGAACTTTCTaGCAGCTACACAGCACCGAA +
Preference number: 4 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMLDRTF*QLHSTE
Trigger: TTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAG...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGCCCTTGTGAGCCTCACTCCTaGCAGCCTTCTTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LSYLIYNKGVGLGDPGGPCEPHS*QPSWIS
Trigger: AGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACA...AGGGCCTCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAAGACACCGGGCCCATCTaGATGCCTGGGGCCTATATC +
Preference number: 4 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKDTGPI*MPGAYI
Trigger: GATATAGGCCCCAGGCATGCAGATGGGCCCGGTGTC...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGTGTAAACCCAGCTATTaGAGGGGTTTTGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GDEERKHPSPTPGPSACLCKPSY*RGFEVK
Trigger: CTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACA...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGAAAATTCTGCGGTCTaGACCCCTCGAGGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGENSAV*TPRGSD
Trigger: GTCACTGCCTCGAGGGGTGCAGACCGCAGAATTTTC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGGAAAACAGGTCACAATaGTACTCCATAAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWENRSQ*YSIKSG
Trigger: CCCTGATTTTATGGAGTAGCATTGTGACCTGTTTTC...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTGTACTCGCAGAGCTATaGTCTGCACACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLVLAEL*SAHRAR
Trigger: CCTGGCTCTGTGTGCAGAGCATAGCTCTGCGAGTAC...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCATGGCCCAGGGGTTATaGTGTCCTGGAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCMAQGL*CPGRRA
Trigger: TGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCAT...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACACGGGTGATACAAGAGTaGCCTGAAGTGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTRVIQE*PEVGWR
Trigger: CCTCCAGCCCACTTCAGGGCACTCTTGTATCACCCG...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGGCGCAGCTTGTCCTCTaGGCTTGCGGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: ENKIRYEKRTWCPLMASAAQLVL*ACGPRG
Trigger: GCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGC...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGCTCCGCACTCCCTCTTaGCGCAGCTTGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQLRTPS*RSLSSG
Trigger: CCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAG...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGTCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQSSEGL*FWFWIW
Trigger: CCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGA...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCAGTAAGTGGCAGAACTaGGATTCCAGTCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LPRRQWLLYPRGGDKEVGSKWQN*DSSPVY
Trigger: ATAGACAGGACTGGAATCCCAGTTCTGCCACTTACT...GCCCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCGCAGCTTCTCCTTGGTaGCCATCTCCTTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCAASPW*PSPWFG
Trigger: CCCAAACCAAGGAGATGGCCACCAAGGAGAAGCTGC...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAACCACAGCCCAGCGGTTaGGTTCCCTTGGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQPQPSG*VPLGSA
Trigger: TGCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGG...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCGAGCACTTCCCCCAGTaGAGGATACAGACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSEHFPQ*RIQTQK
Trigger: CTTTTGAGTCTGTATCCTCCACTGGGGGAAGTGCTC...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTGGTCCAAATAGGGGCTaGGTGGGGGTGTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLAGPNRG*VGVCLP
Trigger: GGGCAGACACACCCCCACCCAGCCCCTATTTGGACC...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCACGAGAGGGCTCTGATTaGAGACAGGTGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPREGSD*RQVPWG
Trigger: TCCCCAAGGCACCTGTCTCCAATCAGAGCCCTCTCG...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGGGTGGGGGACCAGTGTaGCGGTACCCGGGTGATACA +
Preference number: 4 (lower is better)
Translates to: KIPSCVYWTELSASYTAPGGGPV*RYPGDT
Trigger: TGTATCACCCGGGTACCGCCACACTGGTCCCCCACC...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCCAGGCAGCCTGGCCTaGGACCACATGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVPGSLA*DHMGLR
Trigger: CCTCAGACCCATGTGGTCCCAGGCCAGGCTGCCTGG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATGATTTTTGCACACAGTaGTATTTACCGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: STTGCPCSELGALPPVEDDFCTQ*YLPCPR
Trigger: CCTGGGACACGGTAAATACCACTGTGTGCAAAAATC...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGATACAGATAGAACTTaGTGCCTGCGCCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHDTDRT*CLRPRP
Trigger: CGGGCGCGGGCGCAGGCATCAAGTTCTATCTGTATC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR TCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTGCTATTTCTTCCATCTaGACCAGGATTTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPAISSI*TRIWKV
Trigger: TACCTTCCAAATCCTGGTTCAGATGGAAGAAATAGC...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCGTTCTGACGGTCTACTaGCTATCCACTCACCATCTC +
Preference number: 4 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFVLTVY*LSTHHL
Trigger: GAGATGGTGAGTGGATAGTCAGTAGACCGTCAGAAC...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCTCTGGCCAGTGGTTCTaGCGGTCTACTGACTATCCA +
Preference number: 4 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTSGQWF*RSTDYP
Trigger: TGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGA...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCTGGGGTGTGCAGGTaGGGCTGGAGTCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMAGVCR*GWSHPA
Trigger: AGCTGGGTGACTCCAGCCTCACCTGCACACCCCAGC...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATAGGATCCAGGGGGCAGTaGAGGAGCTGCACATGGCCC +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLIGSRGQ*RSCTWP
Trigger: GGGCCATGTGCAGCTCCTTCACTGCCCCCTGGATCC...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTGATACAAGAGTGCCCTaGAGTGGGCTGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTDTRVP*SGLEGP
Trigger: TGGCCCCTCCAGCCCACTTCAGGGCACTCTTGTATC...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTACTTGTCCTCTGGGCTTaGGGTCCTCGGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLLVLWA*GPRGSA
Trigger: CGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAG...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTGACACCGGGCCCATCTaGATGCCTGGGGCCTATATC +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVDTGPI*MPGAYI
Trigger: GATATAGGCCCCAGGCATGCAGATGGGCCCGGTGTC...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGACCTCGAGGCAGTGACTaGCTTTGTGCGTGGTCACGT +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGPRGSD*LCAWSR
Trigger: ACGTGACCACGCACAAAGGCAGTCACTGCCTCGAGG...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CCCAGGAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACACAGGTAGCCACTGCGTaGCAAGTCCCCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PRKIPSCVYWTELSASYTQVATA*QVPSSP
Trigger: TGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTG...TGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACCATGTCCAGAATGTTaGAATTTGCCTACCAACCCA +
Preference number: 4 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTPCPEC*NLPTNP
Trigger: TGGGTTGGTAGGCAAATTGCAACATTCTGGACATGG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGCAGGTGAAGGACTTTaGCCATTCTCTATAGACAGG +
Preference number: 4 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLAGEGL*PFSIDR
Trigger: CCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGC...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGTTGGGTGGGGTGGGCTaGGGGGAGCAGTTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQLGGVG*GEQLGA
Trigger: GGCACCTAACTGCTCCCCGCAGCCCACCCCACCCAA...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGGGAGGGCTGCCCCCTaGTTTCTGGACTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMGRAAP*FLDCPP
Trigger: AGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCC...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTGCGCAGCTTGTCCTCTaGGCTTGCGGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFAQLVL*ACGPRG
Trigger: GCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGC...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACCTGTGGTTCTGGTTCTaGATCTGGGGTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHLWFWF*IWGGCG
Trigger: GCCGCAGCCACCCCAGATCCAGAACCAGAACCACAG...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCACGGACATCTTCCCGTaGGTTTTCTTTTTGTACAAA +
Preference number: 4 (lower is better)
Translates to: TNAQVATACQVPSSPRATTDIFP*VFFLYK
Trigger: TTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGT...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGACGGACATCTTCCCGTaGGTTTTCTTTTTGTACAAA +
Preference number: 4 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWTDIFP*VFFLYK
Trigger: TTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGT...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCTCTTTAATGAGGGCTTaGCAGGAGTCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCSLMRA*QESPRL
Trigger: CAGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGA...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCATGGAGACAGGTGCCTTaGGGAGAGTTGAGGAACGAC +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPWRQVP*GELRND
Trigger: GTCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCA...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGCCAGATCTGGCTGGCTaGGCTATGTGCGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: KIPSCVYWTELSASYTAPPDLAG*AMCGHQ
Trigger: CTGATGCCCGCACATAGCCCAGCCAGCCAGATCTGG...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CCCAGGAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACATGTCTGAATCTTGGGTaGGGTGGGCTGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PRKIPSCVYWTELSASYTCLNLG*GGLRGA
Trigger: TGCTCCCCGCAGCCCACCCCACCCAAGATTCAGACA...TGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCAGCCAGACATATTTCTaGAAGGAGGCAAGACCCACA +
Preference number: 4 (lower is better)
Translates to: SEGAAHGPGVMLSWKESISQTYF*KEARPT
Trigger: TGTGGGTCTTGCCTCCTTCCAGAAATATGTCTGGCT...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACCGCGTGTCTGTTGTCTaGGCAGGCAGCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHRVSVV*AGSSQH
Trigger: ATGCTGAGAGCTGCCTGCTCAGACAACAGACACGCG...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR TCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAACGCGTGTCTGTTGTCTaGGCAGGCAGCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQRVSVV*AGSSQH
Trigger: ATGCTGAGAGCTGCCTGCTCAGACAACAGACACGCG...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AGTGGCTTGCCTAAGGTCAAACAGCCAGTAAGTGGCAGAACTGGGATTCCAGTCTCCTCCTTGCTTCAATaGGGTGGCCTTACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SGLPKVKQPVSGRTGIPVSSLLQ*GGLTPR
Trigger: TCTGGGAGTAAGGCCACCTCATTGAAGCAAGGAGGA...GACTGGAATCCCAGTTCTGCCACTTACTGGCTGTTTGACCTTAGGCAAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR TCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAAGGCCAGGCCAGGACCTaGCTCAGCCACATCAGCAAT +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKGQART*LSHISN
Trigger: ATTGCTGATGTGGCTGAGTCAGGTCCTGGCCTGGCC...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCCCAGTCTCCTTTATGTaGAGGGTTGGTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSPVSFM*RVGSFL
Trigger: AAGGAATGAACCAACCCTTCACATAAAGGAGACTGG...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTGAGGGGCCAGGACCCTaGCAATCCCAACCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVEGPGP*QSQPSR
Trigger: TCTAGAAGGTTGGGATTGTCAGGGTCCTGGCCCCTC...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGCGGAGACATGAAGGTTaGGCATTATTACACAGGTAC +
Preference number: 4 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWRRHEG*ALLHRY
Trigger: GTACCTGTGTAATAATGCTCAACCTTCATGTCTCCG...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACTCACAGTGCCTCCCTaGGCCTCAGTTACCTCATTT +
Preference number: 4 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSALTVPP*ASVTSF
Trigger: AAATGAGGTAACTGAGGCTCAGGGAGGCACTGTGAG...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGCTGGGGTGTGCAGGTaGGGCTGGAGTCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPAGVCR*GWSHPA
Trigger: AGCTGGGTGACTCCAGCCTCACCTGCACACCCCAGC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGGGGACCACATGGGTCTaGGGGAGGGATGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQGTTWV*GRDGTS
Trigger: TGAGGTCCCATCCCTCCCTCAGACCCATGTGGTCCC...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTCAACAATATATATTCTaGGGATCAGGGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPQQYIF*GSGREG
Trigger: TCCTTCTCTCCCTGATCCTCAGAATATATATTGTTG...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTCTGGACAGAACTTTCTaGCAGCTACACAGCACCGAA +
Preference number: 4 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLLDRTF*QLHSTE
Trigger: TTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAG...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCAGGAAAATTCCATCCTaGGTTTACTGGACAGAACTT +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLARKIPS*VYWTEL
Trigger: AAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCT...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCATGTGAGCCTCACTCCTaGCAGCCTTCTTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSACEPHS*QPSWIS
Trigger: AGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACA...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCGGAATGACCAGAACCTaGTATGACCCCATTCAAATG +
Preference number: 4 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIGMTRT*YDPIQM
Trigger: CATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCC...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAAGAAAATTCTGCGGTCTaGACCCCTCGAGGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKENSAV*TPRGSD
Trigger: GTCACTGCCTCGAGGGGTGCAGACCGCAGAATTTTC...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCGAAAACAGGTCACAATaGTACTCCATAAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAENRSQ*YSIKSG
Trigger: CCCTGATTTTATGGAGTAGCATTGTGACCTGTTTTC...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCACCTGGGGACTTGGTCTaGCTGTGTCTTTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPPGDLV*LCLWSR
Trigger: TCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGG...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAACGCAGAGCTATGCTCTaGACACAGAGCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKRRAML*TQSQGW
Trigger: CCAGCCCTGGCTCTGTGTGCAGAGCATAGCTCTGCG...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAATCCAAGGCCACTTCCTaGTGCCTGGAAACTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKSKATS*CLETPR
Trigger: GCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTTGGA...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAATGGCCCAGGGGTTATaGTGTCCTGGAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGMAQGL*CPGRRA
Trigger: TGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCAT...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CCCAGGAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACACGGGTGATACAAGAGTaGCCTGAAGTGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRKIPSCVYWTELSASYTRVIQE*PEVGWR
Trigger: CCTCCAGCCCACTTCAGGGCACTCTTGTATCACCCG...TGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTATTGGGTGGGGTGGGCTaGGGGGAGCAGTTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLLGGVG*GEQLGA
Trigger: GGCACCTAACTGCTCCCCGCAGCCCACCCCACCCAA...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCTTGTACTTCGATTTTTaGACACAGTGGTATTTACCG +
Preference number: 4 (lower is better)
Translates to: TNAQVATACQVPSSPRATLYFDF*TQWYLP
Trigger: CGGTAAATACCACTGTGTGCAAAAATCGAAGTACAA...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CAGGTGGTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCCTGTGGTTCTGGTTCTaGATCTGGGGTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QVVNVCKPSYCRGFEVKSLWFWF*IWGGCG
Trigger: GCCGCAGCCACCCCAGATCCAGAACCAGAACCACAG...GCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTACCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCTCTCCTTGCTTTGTTTaGGAGCTCCTCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTSPCFV*ELLRRA
Trigger: AGCCCTTCTGAGGAGCTCCCAAACAAAGCAAGGAGA...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR CCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAGCAGCTTCTCCTTGGTaGCCATCTCCTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRAASPW*PSPCFV
Trigger: AACAAAGCAAGGAGATGGCCACCAAGGAGAAGCTGC...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR CCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAGCCATCTCCTTGGTTTaGGAGCTCCTCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGAISLV*ELLRRA
Trigger: AGCCCTTCTGAGGAGCTCCCAAACCAAGGAGATGGC...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCCATCCTGCGTTTACTaGACAGAACTTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPPSCVY*TELSAS
Trigger: GCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGG...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTGGGGCCTATATCCTTTaGTCCACTCACCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLAGAYIL*STHLPT
Trigger: GGTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCC...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCATCTTTAATGAGGGCTTaGCAGGAGTCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPSLMRA*QESPRL
Trigger: CAGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGA...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGAGCACTTCCCCCAGTaGAGGATACAGACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGEHFPQ*RIQTQK
Trigger: CTTTTGAGTCTGTATCCTCCACTGGGGGAAGTGCTC...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCGGGGCCTGGGGACTTaGTCTGCCTGTGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVRGLGT*SACVFG
Trigger: ACCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATAGTCATGAGCTCTCATaGAAAGTTTCGTTTATACGG +
Preference number: 4 (lower is better)
Translates to: STTGCPCSELGALPPVEDSHELS*KVSFIR
Trigger: CCGTATAAACGAAACTTTCCATGAGAGCTCATGACT...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGTGTGCTGGGAGATGCTaGCTGGGTGGGGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQCAGRC*LGGGPV
Trigger: CACTGGTCCCCCACCCAGCCAGCATCTCCCAGCACA...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CAGGTGGTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTGTCTGAATCTTGGGTaGGGTGGGCTGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QVVNVCKPSYCRGFEVKSCLNLG*GGLRGA
Trigger: TGCTCCCCGCAGCCCACCCCACCCAAGATTCAGACA...GCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTACCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGCTATTTCTTCCATCTaGACCAGGATTTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: IWLAGLCAGISISDPSQAAISSI*TRIWKV
Trigger: TACCTTCCAAATCCTGGTTCAGATGGAAGAAATAGC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATCTGGCCAGTGGTTCTaGCGGTCTACTGACTATCCA +
Preference number: 4 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKSGQWF*RSTDYP
Trigger: TGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGA...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTGACCAGAACCTGCTATaGCCCCATTCAAATGCAACA +
Preference number: 4 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPDQNLL*PHSNAT
Trigger: TGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTC...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAGGTGGACCAGAGTCATaGGCTCTCATGGAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAGGPES*ALMESF
Trigger: GAAACTTTCCATGAGAGCTCATGACTCTGGTCCACC...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGAGGCCCTTCTCTCCCTaGCCGTCAGGAAATCTCTGT +
Preference number: 4 (lower is better)
Translates to: KIPSCVYWTELSASYTAPRPFSP*PSGNLC
Trigger: ACAGAGATTTCCTGACGGTCAGGGAGAGAAGGGCCT...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATGCTGGGGTGTGCAGGTaGGGCTGGAGTCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNAGVCR*GWSHPA
Trigger: AGCTGGGTGACTCCAGCCTCACCTGCACACCCCAGC...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGAGTCCCAAAGGGGCCTaGGACCTCCACCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQSPKGA*DLHHSC
Trigger: ACAAGAATGGTGGAGGTCTCAGGCCCCTTTGGGACT...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR GCA 90 bp AGTGGCTTGCCTAAGGTCAAACAGCCAGTAAGTGGCAGAACTGGGATTCCAGTCCCATGTCCTCCTCCTTaGTTCAATGAGGTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: SGLPKVKQPVSGRTGIPVPCPPP*FNEVAL
Trigger: TAAGGCCACCTCATTGAAGCAAGGAGGAGGACATGG...GACTGGAATCCCAGTTCTGCCACTTACTGGCTGTTTGACCTTAGGCAAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR GCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTAAGCTGTTCTTGGTGTaGCTTGCTAGGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVKLFLV*LARCQG
Trigger: GCCCTGGCACCTAGCAAGGCACACCAAGAACAGCTT...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAAGTCAGCACCACGGGCTaGCCTTGTTCTGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKVSTTG*PCSELG
Trigger: TCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGAC...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAACCTCGAGGCAGTGACTaGCTTTGTGCGTGGTCACGT +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKPRGSD*LCAWSR
Trigger: ACGTGACCACGCACAAAGGCAGTCACTGCCTCGAGG...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAGTACTCGCAGAGCTATaGTCTGCACACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQVLAEL*SAHRAR
Trigger: CCTGGCTCTGTGTGCAGAGCATAGCTCTGCGAGTAC...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAAATTCCTGGCTCACAGTaGCTCCCTGAGCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKIPGSQ*LPEPQL
Trigger: TAACTGAGGCTCAGGGAGGCACTGTGAGCCAGGAAT...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTGGAGGGGCCATGCTGTaGTCTCCCCTTGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCGGAML*SPLVFP
Trigger: GGGAAACACAAGGGGAGAGCACAGCATGGCCCCTCC...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTTCCAGCCCAGCCCAATaGCCCAGTTGGGGTACACGT +
Preference number: 4 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCSSPAQ*PSWGTR
Trigger: ACGTGTACCCCAACTGGGCCATTGGGCTGGGCTGGA...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGCTGTGGTTCTGGTTCTaGATCTGGGGTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: ENKIRYEKRTWCPLMASALWFWF*IWGGCG
Trigger: GCCGCAGCCACCCCAGATCCAGAACCAGAACCACAG...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGTCAATCCACACCTGTaGGTCCTCAAGGCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHVNPHL*VLKAGD
Trigger: ATCACCCGCCTTGAGGACCCACAGGTGTGGATTGAC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTGTCAATCCACACCTGTaGGTCCTCAAGGCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LESDFCYRASSFSFSQSPVNPHL*VLKAGD
Trigger: ATCACCCGCCTTGAGGACCCACAGGTGTGGATTGAC...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CCCAGGAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCAGCTTCTCCTTGGTaGCCATCTCCTTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PRKIPSCVYWTELSASYTAASPW*PSPWFG
Trigger: CCCAAACCAAGGAGATGGCCACCAAGGAGAAGCTGC...TGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTTCCTGCCAGCCTTCTTaGATCTCTAGCAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVSCQPS*ISSSSL
Trigger: GAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGA...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTGCCCATCTGCATGCCTaGGGCCTATATCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLAAHLHA*GLYPLV
Trigger: GACCAAAGGATATAGGCCCCAGGCATGCAGATGGGC...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAGGTCCAAATAGGGGCTaGGTGGGGGTGTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLGPNRG*VGVCLP
Trigger: GGGCAGACACACCCCCACCCAGCCCCTATTTGGACC...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGTTCAGAATTGCCCCTTaGGAGGGGGACACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KIPSCVYWTELSASYTAPFRIAP*EGDTKG
Trigger: GCCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAA...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTCAGAATTGCCCCTTaGGAGGGGGACACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LESDFCYRASSFSFSQSPFRIAP*EGDTKG
Trigger: GCCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAA...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGGAATCGTTGAGAGTTTaGAATAGGACTGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMESLRV*NRTGCC
Trigger: ACAACACCCAGTCCTATTCCAAACTCTCAACGATTC...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAATGGAGACAGGTGCCTTaGGGAGAGTTGAGGAACGAC +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQWRQVP*GELRND
Trigger: GTCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCA...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCTTCTCTATAGACAGGTaGACCAGAGTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFFSIDR*TRVMSS
Trigger: AGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGTTCTCTATAGACAGGTaGACCAGAGTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VRHSPFPAPTSENLQLELFSIDR*TRVMSS
Trigger: AGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTCTTCCTTTCCAGATCTaGCTGGCTGGGCTATGTGCG +
Preference number: 4 (lower is better)
Translates to: LESDFCYRASSFSFSQSPLPFQI*LAGLCA
Trigger: CGCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAG...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCACGGAGCCACCGCATaGGTCCAGGAATTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVHGATA*VQEFCE
Trigger: CTCACAGAATTCCTGGACCCATGCGGTGGCTCCGTG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTTTAATGAGGTGTGCTGGGAGATGCTaGCTGGGTGGGGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: GWFIPLASLFFTKPSLMRCAGRC*LGGGPV
Trigger: CACTGGTCCCCCACCCAGCCAGCATCTCCCAGCACA...CCTCATTAAACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGTGTCTGAATCTTGGGTaGGGTGGGCTGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMCLNLG*GGLRGA
Trigger: TGCTCCCCGCAGCCCACCCCACCCAAGATTCAGACA...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATACTTGTGTCTGAATCTTaGGTGGGGTGGGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLILVSES*VGWAAG
Trigger: CCCCGCAGCCCACCCCACCCAAGATTCAGACACAAG...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCACAGTTGCTAGGGATTaGGAGATTAATTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGTVARD*EINWVK
Trigger: TTTTACCCAATTAATCTCCCAATCCCTAGCAACTGT...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAAGCCAGACATATTTCTaGAAGGAGGCAAGACCCACA +
Preference number: 4 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRSQTYF*KEARPT
Trigger: TGTGGGTCTTGCCTCCTTCCAGAAATATGTCTGGCT...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
3UTR CAA 72 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTaGCCTACCAACCCAAAATACTGTGGCCTTTCACCC +
Preference number: 4 (lower is better)
Translates to: EAFLRPCPECCN*PTNPKYCGLSP
Trigger: GGGTGAAAGGCCACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGGTCCTCAAGGCGGGTaGTGTCAGGATACAGATAGA +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHGPQGG*CQDTDR
Trigger: TCTATCTGTATCCTGACATCACCCGCCTTGAGGACC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR TCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAGGTCCTCAAGGCGGGTaGTGTCAGGATACAGATAGA +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQGPQGG*CQDTDR
Trigger: TCTATCTGTATCCTGACATCACCCGCCTTGAGGACC...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGACCAGTCTCCTTTATGTaGAGGGTTGGTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRPVSFM*RVGSFL
Trigger: AAGGAATGAACCAACCCTTCACATAAAGGAGACTGG...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAGTTCTGACGGTCTACTaGCTATCCACTCACCATCTC +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGVLTVY*LSTHHL
Trigger: GAGATGGTGAGTGGATAGTCAGTAGACCGTCAGAAC...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAATCTGGCCAGTGGTTCTaGCGGTCTACTGACTATCCA +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQSGQWF*RSTDYP
Trigger: TGGATAGTCAGTAGACCGTCAGAACCACTGGCCAGA...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGCACCTCTTGCGAGGCTaGGTTGTGAGCCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMHLLRG*VVSLTP
Trigger: AGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTG...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCAACTTTAAGAGATGCTaGGATGTTGCTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFNFKRC*DVAWGM
Trigger: CATTCCCCAAGCAACATCTCAGCATCTCTTAAAGTT...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGCAAGAGCCCCTGCTGTaGAAATTCTGCGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWQEPLL*KFCGLH
Trigger: GTGCAGACCGCAGAATTTTCACAGCAGGGGCTCTTG...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTCGGAGACATGAAGGTTaGGCATTATTACACAGGTAC +
Preference number: 4 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLRRHEG*ALLHRY
Trigger: GTACCTGTGTAATAATGCTCAACCTTCATGTCTCCG...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTCTCACAGTGCCTCCCTaGGCCTCAGTTACCTCATTT +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLALTVPP*ASVTSF
Trigger: AAATGAGGTAACTGAGGCTCAGGGAGGCACTGTGAG...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTGTGGCGGTACCCGGGTaGTACAAGAGTGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSVAVPG*YKSALK
Trigger: CTTCAGGGCACTCTTGTATCACCCGGGTACCGCCAC...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGGACCTCAGGCCACCTTaGAGGATTTTCTCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQDLRPP*RIFSWV
Trigger: GACCCAAGAGAAAATCCTTCAAGGTGGCCTGAGGTC...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR TCA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATGGGACCACATGGGTCTaGGGGAGGGATGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNGTTWV*GRDGTS
Trigger: TGAGGTCCCATCCCTCCCTCAGACCCATGTGGTCCC...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGCCCTTGTATACTGCAAGACTaGACTACACACCAAGGATCT +
Preference number: 4 (lower is better)
Translates to: LSYLIYNKGVGLGDPGGPCILQD*TTHQGS
Trigger: AGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACA...AGGGCCTCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCGAAAATGAGATCTATTaGTGGCAAGAAGATCAATTC +
Preference number: 4 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAENEIY*WQEDQF
Trigger: GAATTGATCTTCTTGCCAGCAATAGATCTCATTTTC...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGTCTTCCCCCTGGGTCTaGCAGCTAATGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMSSPWV*QLMGPL
Trigger: GAGAGGACCCATTAGCTGGCAGACCCAGGGGGAAGA...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGTTAGAATCAGACTTCTaGTATAGGGCCTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQLESDF*YRASSF
Trigger: GAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGCCGGGCCCATCTGCATaGCTGGGGCCTATATCCTTT +
Preference number: 4 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMPGPSA*LGPISF
Trigger: AAAGGATATAGGCCCCAGGCATGCAGATGGGCCCGG...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATAGATGGGGTTCAGAATTaGCCCTTGGGAGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLIDGVQN*PLGGGH
Trigger: GTGTCCCCCTCCCAAGGGGCAATTCTGAACCCCATC...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAATCCCCACGTGCCACCTaGCCTCAATCATTGACAGTG +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKSPRAT*PQSLTV
Trigger: CACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGA...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTATGCCCAGGTAGCCACTaGGTGCCAAGTCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLCPGSH*VPSPLF
Trigger: GAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCA...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTCCTGGGGACTTGGTCTaGCTGTGTCTTTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: LESDFCYRASSFSFSQSPPGDLV*LCLWSR
Trigger: TCTAGACCAAAGACACAGGCAGACCAAGTCCCCAGG...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCAGCAGGTGAAGGACTTTaGCCATTCTCTATAGACAGG +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPAGEGL*PFSIDR
Trigger: CCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGC...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTACACTCACCATTCCCTaGACCTACCTCGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTTLTIP*TYLGEP
Trigger: AGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGT...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGACACTCACCATTCCCTaGACCTACCTCGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: KIPSCVYWTELSASYTAPTLTIP*TYLGEP
Trigger: AGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGT...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTTTAATGAGGTCCAAGGCCACTTCCTaGTGCCTGGAAACTCCCCGC +
Preference number: 4 (lower is better)
Translates to: GWFIPLASLFFTKPSLMRSKATS*CLETPR
Trigger: GCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTTGGA...CCTCATTAAACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTATCCAAGGCCACTTCCTaGTGCCTGGAAACTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLSKATS*CLETPR
Trigger: GCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTTGGA...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTGGAGGGGCCATGCTGTaGTCTCCCCTTGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSGGAML*SPLVFP
Trigger: GGGAAACACAAGGGGAGAGCACAGCATGGCCCCTCC...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATGGGCTGGAGGGGCCATaGTGTGCTCTCCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNGLEGP*CALPLC
Trigger: ACACAAGGGGAGAGCACAGCATGGCCCCTCCAGCCC...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAAATATATAACAGGATaGTCCATCCCTCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: LARLSCEPHSCQPSWISSKYITG*SIPRRT
Trigger: TGTTCTCCGAGGGATGGAGCATCCTGTTATATATTT...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCATCCAGCCCAGCCCAATaGCCCAGTTGGGGTACACGT +
Preference number: 4 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPSSPAQ*PSWGTR
Trigger: ACGTGTACCCCAACTGGGCCATTGGGCTGGGCTGGA...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACTCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHSSEGL*FWFWIW
Trigger: CCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGA...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGTCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQSSEGL*FWFWIW
Trigger: CCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGA...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTGTCAATCCACACCTGTaGGTCCTCAAGGCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVVNPHL*VLKAGD
Trigger: ATCACCCGCCTTGAGGACCCACAGGTGTGGATTGAC...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGTCAACTTCAACAAACTaGCTATCCAGTCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: VRHSPFPAPTSENLQLELSTSTN*LSSPSK
Trigger: CTTGCTTGGACTGGATAGCCAGTTTGTTGAAGTTGA...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGTGGCTTGCCTAAGGTCAAACAGCCAGTAAGTGGCAGAACTGGGATTCCAGTCCAAACAGCCAGTAAGTaGCAGAACTGGGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: SGLPKVKQPVSGRTGIPVQTASK*QNWDSS
Trigger: ACTGGAATCCCAGTTCTGCCACTTACTGGCTGTTTG...GACTGGAATCCCAGTTCTGCCACTTACTGGCTGTTTGACCTTAGGCAAGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTTGGTGGCCATCTCCTTaGTTTGGGAGCTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVWWPSP*FGSSSE
Trigger: TTCTGAGGAGCTCCCAAACCAAGGAGATGGCCACCA...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CCA 90 bp GCCCAGCCCAATGGCCCAGTTGGGGTACACGTATGTTTTGTTGTAGGTCAGGGGACGGACATCTTCCCGTaGGTTTTCTTTTTGTACAAA +
Preference number: 4 (lower is better)
Translates to: AQPNGPVGVHVCFVVGQGTDIFP*VFFLYK
Trigger: TTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGT...CCCCTGACCTACAACAAAACATACGTGTACCCCAACTGGGCCATTGGGCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGTCCTGCCAGCCTTCTTaGATCTCTAGCAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWSCQPS*ISSSSL
Trigger: GAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGA...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTTCTTTAATGAGGGCTTaGCAGGAGTCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLASLMRA*QESPRL
Trigger: CAGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGA...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTCAACCCAAAATACTGTaGCCTTTCACCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLAQPKIL*PFTQGA
Trigger: GGCTCCCTGGGTGAAAGGCCACAGTATTTTGGGTTG...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTGTCTGCCTGTGTCTTTaGTCTAGAATTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPVCLCL*SRIWSE
Trigger: CTCAGACCAAATTCTAGACCAAAGACACAGGCAGAC...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp CAGGTGGTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTCTGTGGCCCTAGCATaGCCCATCTCAACGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QVVNVCKPSYCRGFEVKSSVALA*PISTQC
Trigger: ACACTGCGTTGAGATGGGCCATGCTAGGGCCACAGA...GCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTACCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTCGCGTGTCTGTTGTCTaGGCAGGCAGCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFRVSVV*AGSSQH
Trigger: ATGCTGAGAGCTGCCTGCTCAGACAACAGACACGCG...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCGCAGGGGTTTTGAAGTaGAGAGCTTTGTTATATCCT +
Preference number: 4 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCAGVLK*RALLYP
Trigger: AGGATATAACAAAGCTCTTCACTTCAAAACCCCTGC...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGCAGGGGTTTTGAAGTaGAGAGCTTTGTTATATCCT +
Preference number: 4 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGAGVLK*RALLYP
Trigger: AGGATATAACAAAGCTCTTCACTTCAAAACCCCTGC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGCCCTCTATTGCAGGGGTTTTaGAGTGAAGAGCTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: LSYLIYNKGVGLGDPGGPLLQGF*SEELCY
Trigger: ATAACAAAGCTCTTCACTTCAAAACCCCTGCAATAG...AGGGCCTCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGTGCCTTGGGGAGAGTTaGGGAACGACTTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMCLGES*GTTSFQ
Trigger: CTGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCA...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATATGCCTTGGGGAGAGTTaGGGAACGACTTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLICLGES*GTTSFQ
Trigger: CTGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCA...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTGGTGGACCAGAGTCATaGGCTCTCATGGAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLAGGPES*ALMESF
Trigger: GAAACTTTCCATGAGAGCTCATGACTCTGGTCCACC...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTGACCTCAGGCCACCTTaGAGGATTTTCTCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVDLRPP*RIFSWV
Trigger: GACCCAAGAGAAAATCCTTCAAGGTGGCCTGAGGTC...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCTGTATACTGCAAGACTaGACTACACACCAAGGATCT +
Preference number: 4 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTCILQD*TTHQGS
Trigger: AGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACA...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAAGCTGAAACACATACATaGCACCCTCCGTCACCATCG +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKAETHT*HPPSPS
Trigger: CGATGGTGACGGAGGGTGGCATGTATGTGTTTCAGC...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTCTGGACAGAACTTTCTaGCAGCTACACAGCACCGAA +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVLDRTF*QLHSTE
Trigger: TTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAG...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCACCGGGCCCATCTGCATaGCTGGGGCCTATATCCTTT +
Preference number: 4 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPPGPSA*LGPISF
Trigger: AAAGGATATAGGCCCCAGGCATGCAGATGGGCCCGG...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATGTAAACCCAGCTATTaGAGGGGTTTTGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGCKPSY*RGFEVK
Trigger: CTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACA...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAAGGTTCCAAGAGCCCCTaGTGTGAAAATTCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKGSKSP*CENSAV
Trigger: GACCGCAGAATTTTCACAGCAGGGGCTCTTGGAACC...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGGAAAACAGGTCACAATaGTACTCCATAAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: VRHSPFPAPTSENLQLELENRSQ*YSIKSG
Trigger: CCCTGATTTTATGGAGTAGCATTGTGACCTGTTTTC...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGCAGAATGTTGCAATTTaGCTACCAACCCAAAATACT +
Preference number: 4 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMQNVAI*LPTQNT
Trigger: AGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTG...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGATTCCTGGCTCACAGTaGCTCCCTGAGCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWIPGSQ*LPEPQL
Trigger: TAACTGAGGCTCAGGGAGGCACTGTGAGCCAGGAAT...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAACACCTCTGGCTTCTCTaGACCTCAGTTCCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKHLWLL*TSVPSF
Trigger: GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTG...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCGGGCTGGAGGGGCCATaGTGTGCTCTCCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVGLEGP*CALPLC
Trigger: ACACAAGGGGAGAGCACAGCATGGCCCCTCCAGCCC...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCATTGTACTTCGATTTTTaGACACAGTGGTATTTACCG +
Preference number: 4 (lower is better)
Translates to: IWLAGLCAGISISDPSQALYFDF*TQWYLP
Trigger: CGGTAAATACCACTGTGTGCAAAAATCGAAGTACAA...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAGCCCAATGGCCCAGTTaGGGTACACGTATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQAQWPS*GTRMFC
Trigger: ACAAAACATACGTGTACCCCAACTGGGCCATTGGGC...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACACTGCAGCTTCTCCTTaGTGGCCATCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHTAASP*WPSPCF
Trigger: AAAGCAAGGAGATGGCCACCAAGGAGAAGCTGCAGT...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGACTGCAGCTTCTCCTTaGTGGCCATCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQTAASP*WPSPCF
Trigger: AAAGCAAGGAGATGGCCACCAAGGAGAAGCTGCAGT...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACTCTCCTTGCTTTGTTTaGGAGCTCCTCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHSPCFV*ELLRRA
Trigger: AGCCCTTCTGAGGAGCTCCCAAACAAAGCAAGGAGA...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGCAGCTTCTCCTTGGTaGCCATCTCCTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHAASPW*PSPCFV
Trigger: AACAAAGCAAGGAGATGGCCACCAAGGAGAAGCTGC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTTCAACTTCAACAAACTaGCTATCCAGTCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLSTSTN*LSSPSK
Trigger: CTTGCTTGGACTGGATAGCCAGTTTGTTGAAGTTGA...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AGTAAGTGGCAGAACTGGGATTCCAGTCCTGTCTATGGCCAAAGGCATAAATTTGAGGAGATAAGGAAGTaGGCCATCCTCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SKWQNWDSSPVYGQRHKFEEIRK*AILSAP
Trigger: TGGGGCAGAGAGGATGGCCCACTTCCTTATCTCCTC...AAATTTATGCCTTTGGCCATAGACAGGACTGGAATCCCAGTTCTGCCACTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CCA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTCCATCCTGCGTTTACTaGACAGAACTTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVPSCVY*TELSAS
Trigger: GCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGG...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTCCATCCTGCGTTTACTaGACAGAACTTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLAPSCVY*TELSAS
Trigger: GCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGG...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGGGGCCTATATCCTTTaGTCCACTCACCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPGAYIL*STHLPT
Trigger: GGTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCAACCCAAAATACTGTaGCCTTTCACCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVQPKIL*PFTQGA
Trigger: GGCTCCCTGGGTGAAAGGCCACAGTATTTTGGGTTG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATCGGGGCCTGGGGACTTaGTCTGCCTGTGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNRGLGT*SACVFG
Trigger: ACCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCG...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTCACGGAGCCACCGCATaGGTCCAGGAATTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSHGATA*VQEFCE
Trigger: CTCACAGAATTCCTGGACCCATGCGGTGGCTCCGTG...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTCCACTTCCTGCTGCCTaGAAACTCCCCGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVPLPAA*KLPAEP
Trigger: AGGCTCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGG...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATAGGGGTTATGCTGTCCTaGAAGGAGAGCATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLIGVMLS*KESIQG
Trigger: GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCC...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCTGCCCTGAAGTGGGCTaGAGGGGCCATGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVCPEVG*RGHAVL
Trigger: GAGCACAGCATGGCCCCTCCAGCCCACTTCAGGGCA...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCCTCTGCCTTTAGACTaGCTACCCAGAGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVPLPLD*LPRAFP
Trigger: GGGAAATGCTCTGGGTAGCCAGTCTAAAGGCAGAGG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGTCATGGTCTCCACAATaGTGTGGGTCGGTTTCACGA +
Preference number: 4 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWSWSPQ*CGSVSR
Trigger: TCGTGAAACCGACCCACATCATTGTGGAGACCATGA...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CCCAGGAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGACCAGAACCTGCTATaGCCCCATTCAAATGCAACA +
Preference number: 4 (lower is better)
Translates to: PRKIPSCVYWTELSASYTDQNLL*PHSNAT
Trigger: TGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTC...TGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGGACCAGAACCTGCTATaGCCCCATTCAAATGCAACA +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQDQNLL*PHSNAT
Trigger: TGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTC...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR TCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGATGTTGCTTGGGGAATaGCCAGAACCTGCTATGACC +
Preference number: 4 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWMLLGE*PEPAMT
Trigger: GGTCATAGCAGGTTCTGGTCATTCCCCAAGCAACAT...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGACTATTGCAGGGGTTTTaGAGTGAAGAGCTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGLLQGF*SEELCY
Trigger: ATAACAAAGCTCTTCACTTCAAAACCCCTGCAATAG...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTAGGCCCTTCTCTCCCTaGCCGTCAGGAAATCTCTGT +
Preference number: 4 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSRPFSP*PSGNLC
Trigger: ACAGAGATTTCCTGACGGTCAGGGAGAGAAGGGCCT...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACAAATCTTTCAGACACTaGAGCTTCTCCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHKSFRH*SFSLVA
Trigger: GGCCACCAAGGAGAAGCTGCAGTGTCTGAAAGATTT...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR GCA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGCAGAATGTTGCAATTTaGCTACCAACCCAAAATACT +
Preference number: 4 (lower is better)
Translates to: VRHSPFPAPTSENLQLELQNVAI*LPTQNT
Trigger: AGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTG...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGCACCTCTGGCTTCTCTaGACCTCAGTTCCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQHLWLL*TSVPSF
Trigger: GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTG...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATACCCTGCTTTCTGGACTaGCCACCTCTACAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLIPCFLD*PPLQVW
Trigger: CCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGG...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAGCAGCACCAGGAGCATaGCGAATGGAAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLAAPGA*RMEKWL
Trigger: CAGCCACTTTTCCATTCGCCATGCTCCTGGTGCTGC...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGTCAATCCACACCTGTaGGTCCTCAAGGCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPVNPHL*VLKAGD
Trigger: ATCACCCGCCTTGAGGACCCACAGGTGTGGATTGAC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAACCACAGCCCAGCGGTTaGGTTCCCTTGGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQPQPSG*VPLGSA
Trigger: TGCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGG...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTACTCCTTTCTTCCCCCTaGGTCTGCCAGCTAATGGGT +
Preference number: 4 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLLLSSP*VCQLMG
Trigger: ACCCATTAGCTGGCAGACCCAGGGGGAAGAAAGGAG...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGCCCATCTGCATGCCTaGGGCCTATATCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPAHLHA*GLYPLV
Trigger: GACCAAAGGATATAGGCCCCAGGCATGCAGATGGGC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCATGGAGACAGGTGCCTTaGGGAGAGTTGAGGAACGAC +
Preference number: 4 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPWRQVP*GELRND
Trigger: GTCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCA...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTTCCTGCCTAAGGATCTaGCACACCTCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCSCLRI*HTSGFS
Trigger: AGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGA...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAGCCTCGGGGTCAGTCTaGAGCCAGGGCGACTTCATC +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQASGSV*SQGDFI
Trigger: GATGAAGTCGCCCTGGCTCCAGACTGACCCCGAGGC...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTAGCCAGACATATTTCTaGAAGGAGGCAAGACCCACA +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLASQTYF*KEARPT
Trigger: TGTGGGTCTTGCCTCCTTCCAGAAATATGTCTGGCT...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAGGTCCTCAAGGCGGGTaGTGTCAGGATACAGATAGA +
Preference number: 4 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLGPQGG*CQDTDR
Trigger: TCTATCTGTATCCTGACATCACCCGCCTTGAGGACC...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCGAGAGCGCCGTTCATaGCGGTGCGAGAGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVRERRS*RCESCK
Trigger: CTTACAACTCTCGCACCGTCATGAACGGCGCTCTCG...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCGTTTATACGGAGACATaGAGGTTGAGCATTATTACA +
Preference number: 4 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTVYTET*RLSIIT
Trigger: TGTAATAATGCTCAACCTTCATGTCTCCGTATAAAC...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTGGTGGACCAGAGTCATaGGCTCTCATGGAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCGGPES*ALMESF
Trigger: GAAACTTTCCATGAGAGCTCATGACTCTGGTCCACC...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAGGAATGACCAGAACCTaGTATGACCCCATTCAAATG +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQGMTRT*YDPIQM
Trigger: CATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCC...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTGGTTCCAAGAGCCCCTaGTGTGAAAATTCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFGSKSP*CENSAV
Trigger: GACCGCAGAATTTTCACAGCAGGGGCTCTTGGAACC...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATAACTGCAGCTTCTCCTTaGTGGCCATCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLITAASP*WPSPCF
Trigger: AAAGCAAGGAGATGGCCACCAAGGAGAAGCTGCAGT...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR CCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAACTGTGGTTCTGGTTCTaGATCTGGGGTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQLWFWF*IWGGCG
Trigger: GCCGCAGCCACCCCAGATCCAGAACCAGAACCACAG...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGTCTCCTTGCTTTGTTTaGGAGCTCCTCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ENKIRYEKRTWCPLMASASPCFV*ELLRRA
Trigger: AGCCCTTCTGAGGAGCTCCCAAACAAAGCAAGGAGA...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CCA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGGCAGCTTCTCCTTGGTaGCCATCTCCTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ENKIRYEKRTWCPLMASAAASPW*PSPCFV
Trigger: AACAAAGCAAGGAGATGGCCACCAAGGAGAAGCTGC...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAAGACTGCCTTTGTGCGTaGTCACGTTTCGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKDCLCA*SRFGFI
Trigger: AATGAAACCGAAACGTGACCACGCACAAAGGCAGTC...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTTTCTCTATAGACAGGTaGACCAGAGTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLAFSIDR*TRVMSS
Trigger: AGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATCTTCCTTTCCAGATCTaGCTGGCTGGGCTATGTGCG +
Preference number: 4 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNLPFQI*LAGLCA
Trigger: CGCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAG...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTGATTTTTGCACACAGTaGTATTTACCGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTDFCTQ*YLPCPR
Trigger: CCTGGGACACGGTAAATACCACTGTGTGCAAAAATC...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAACAGTTGCTAGGGATTaGGAGATTAATTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGTVARD*EINWVK
Trigger: TTTTACCCAATTAATCTCCCAATCCCTAGCAACTGT...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
3UTR CAA 72 bp ATAAGAAGAGGCCTTCCTCAGGCCATGTCCAGAATGTaGCAATTTGCCTACCAACCCAAAATACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: IRRGLPQAMSRM*QFAYQPKILWP
Trigger: AGGCCACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTCTTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 72 bp TTCCATAAAGGCTTGTCTTTGGTTGTCAGGAAGACCTaGAGGATGTTGCTGGATGTAGCCCTGGTTAGACAC +
Preference number: 4 (lower is better)
Translates to: FHKGLSLVVRKT*RMLLDVALVRH
Trigger: GTGTCTAACCAGGGCTACATCCAGCAACATCCTCAAGGTCTTCCTGACAACCAAAGACAAGCCTTTATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 72 bp ACATGGAGGGGAGCGCATTTCCTTTTCCATAAAGGCTaGTCTTTGGTTGTCAGGAAGACCTTGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: TWRGAHFLFHKG*SLVVRKTLRML
Trigger: CAACATCCTCAAGGTCTTCCTGACAACCAAAGACAAGCCTTTATGGAAAAGGAAATGCGCTCCCCTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACCAAGTTCTGAAACTGTaGAAACATCCAGTCACACCT +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHQVLKL*KHPVTP
Trigger: AGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTG...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR TCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGTGCACAACCAAGTTCTaGAACTGTGAAAACATCCAG +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQCTTKF*NCENIQ
Trigger: CTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCA...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR TCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAACACCTCTTGCGAGGCTaGGTTGTGAGCCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQHLLRG*VVSLTP
Trigger: AGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTG...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTATGTTGCTTGGGGAATaGCCAGAACCTGCTATGACC +
Preference number: 4 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFMLLGE*PEPAMT
Trigger: GGTCATAGCAGGTTCTGGTCATTCCCCAAGCAACAT...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAAACTTTAAGAGATGCTaGGATGTTGCTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQNFKRC*DVAWGM
Trigger: CATTCCCCAAGCAACATCTCAGCATCTCTTAAAGTT...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCGGAGACATGAAGGTTaGGCATTATTACACAGGTAC +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVRRHEG*ALLHRY
Trigger: GTACCTGTGTAATAATGCTCAACCTTCATGTCTCCG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGAAATCTTTCAGACACTaGAGCTTCTCCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQKSFRH*SFSLVA
Trigger: GGCCACCAAGGAGAAGCTGCAGTGTCTGAAAGATTT...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTAAATCTTTCAGACACTaGAGCTTCTCCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCKSFRH*SFSLVA
Trigger: GGCCACCAAGGAGAAGCTGCAGTGTCTGAAAGATTT...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGTAAGTGGCAGAACTGGGATTCCAGTCCTGTCTATGGCCAAAGGCATAAATTTAAATCTTTCAGACACTaGAGCTTCTCCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SKWQNWDSSPVYGQRHKFKSFRH*SFSLVA
Trigger: GGCCACCAAGGAGAAGCTGCAGTGTCTGAAAGATTT...AAATTTATGCCTTTGGCCATAGACAGGACTGGAATCCCAGTTCTGCCACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR GCA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGAAATCTTTCAGACACTaGAGCTTCTCCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ENKIRYEKRTWCPLMASAKSFRH*SFSLVA
Trigger: GGCCACCAAGGAGAAGCTGCAGTGTCTGAAAGATTT...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR GCA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTTTAGAATCAGACTTCTaGTATAGGGCCTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTLESDF*YRASSF
Trigger: GAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CCCAGGAAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACATTAGAATCAGACTTCTaGTATAGGGCCTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: PRKIPSCVYWTELSASYTLESDF*YRASSF
Trigger: GAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA...TGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAATGTAAACCCAGCTATTaGAGGGGTTTTGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQCKPSY*RGFEVK
Trigger: CTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACA...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCTCCCCACGTGCCACCTaGCCTCAATCATTGACAGTG +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVSPRAT*PQSLTV
Trigger: CACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGA...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGCCATGTCCAGAATGTTaGAATTTGCCTACCAACCCA +
Preference number: 4 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWPCPEC*NLPTNP
Trigger: TGGGTTGGTAGGCAAATTGCAACATTCTGGACATGG...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCCATGTCCAGAATGTTaGAATTTGCCTACCAACCCA +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVPCPEC*NLPTNP
Trigger: TGGGTTGGTAGGCAAATTGCAACATTCTGGACATGG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAAAGGCCACTTCCTGCTaGCTGGAAACTCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQKATSC*LETPRR
Trigger: TCTGCGGGGAGTTTCCAGGCAGCAGGAAGTGGCCTT...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGACAAAAGCTTGTATACTaGAAGACTGAACTACACACC +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGQKLVY*KTELHT
Trigger: GGTGTGTAGTTCAGTCTTGCAGTATACAAGCTTTTG...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACTCAACTTCAACAAACTaGCTATCCAGTCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHSTSTN*LSSPSK
Trigger: CTTGCTTGGACTGGATAGCCAGTTTGTTGAAGTTGA...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATAGACTGCCTTTGTGCGTaGTCACGTTTCGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLIDCLCA*SRFGFI
Trigger: AATGAAACCGAAACGTGACCACGCACAAAGGCAGTC...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTGAATCGTTGAGAGTTTaGAATAGGACTGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLAESLRV*NRTGCC
Trigger: ACAACACCCAGTCCTATTCCAAACTCTCAACGATTC...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTTCCTGCCTAAGGATCTaGCACACCTCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVSCLRI*HTSGFS
Trigger: AGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGA...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCGGGGTTATGCTGTCCTaGAAGGAGAGCATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVGVMLS*KESIQG
Trigger: GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCC...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
3UTR CAA 72 bp GTCCCCTCTTCCCCACGTGCCACCTGCCCTCAATCATaGACAGTGGTTAGTTTACTAAAGTTATATAAGACA +
Preference number: 4 (lower is better)
Translates to: VPSSPRATCPQS*TVVSLLKLYKT
Trigger: TGTCTTATATAACTTTAGTAAACTAACCACTGTCAATGATTGAGGGCAGGTGGCACGTGGGGAAGAGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGTCAGTGTGGCTACAGTaGGATTATTTGTGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQSVWLQ*DYLCSL
Trigger: TAGACTACACAAATAATCTCACTGTAGCCACACTGA...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR TCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATAACATCTAATTCAGTATaGAAGCTCTGCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLITSNSV*KLCLST
Trigger: CGTGGAGAGGCAGAGCTTTCATACTGAATTAGATGT...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTCCAGTCTCCTTTATGTaGAGGGTTGGTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCPVSFM*RVGSFL
Trigger: AAGGAATGAACCAACCCTTCACATAAAGGAGACTGG...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCTCACAGTGCCTCCCTaGGCCTCAGTTACCTCATTT +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVLTVPP*ASVTSF
Trigger: AAATGAGGTAACTGAGGCTCAGGGAGGCACTGTGAG...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTCAACAATATATATTCTaGGGATCAGGGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LESDFCYRASSFSFSQSPQQYIF*GSGREG
Trigger: TCCTTCTCTCCCTGATCCTCAGAATATATATTGTTG...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCAGAAAATGAGATCTATTaGTGGCAAGAAGATCAATTC +
Preference number: 4 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPENEIY*WQEDQF
Trigger: GAATTGATCTTCTTGCCAGCAATAGATCTCATTTTC...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGAAAATGAGATCTATTaGTGGCAAGAAGATCAATTC +
Preference number: 4 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTENEIY*WQEDQF
Trigger: GAATTGATCTTCTTGCCAGCAATAGATCTCATTTTC...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATATCAACAGGTATGTCATaGTTCATTCCTGCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLISTGMS*FIPAGN
Trigger: GTTGCCTGCAGGAATGAAGCATGACATACCTGTTGA...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAACAGAATGTTGCAATTTaGCTACCAACCCAAAATACT +
Preference number: 4 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKQNVAI*LPTQNT
Trigger: AGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTG...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGATTGTACTTCGATTTTTaGACACAGTGGTATTTACCG +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGLYFDF*TQWYLP
Trigger: CGGTAAATACCACTGTGTGCAAAAATCGAAGTACAA...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTAAATATATAACAGGATaGTCCATCCCTCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: LESDFCYRASSFSFSQSPKYITG*SIPRRT
Trigger: TGTTCTCCGAGGGATGGAGCATCCTGTTATATATTT...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATGCCCAATGGCCCAGTTaGGGTACACGTATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNAQWPS*GTRMFC
Trigger: ACAAAACATACGTGTACCCCAACTGGGCCATTGGGC...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTACTGCAGCTTCTCCTTaGTGGCCATCTCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVTAASP*WPSPWF
Trigger: AAACCAAGGAGATGGCCACCAAGGAGAAGCTGCAGT...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CCA 90 bp GCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGATCTCAATTCCTAGCTAGTCATGAGCTCTCATaGAAAGTTTCGTTTATACGG +
Preference number: 4 (lower is better)
Translates to: ASLHLSSLFHKQGSQFLASHELS*KVSFIR
Trigger: CCGTATAAACGAAACTTTCCATGAGAGCTCATGACT...AGCTAGGAATTGAGATCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCTCTGCCTTTAGACTaGCTACCCAGAGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVPLPLD*LPRAFP
Trigger: GGGAAATGCTCTGGGTAGCCAGTCTAAAGGCAGAGG...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAGACCTCAGGCCACCTTaGAGGATTTTCTCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQDLRPP*RIFSWV
Trigger: GACCCAAGAGAAAATCCTTCAAGGTGGCCTGAGGTC...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAACAACAATATATATTCTaGGGATCAGGGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKQQYIF*GSGREG
Trigger: TCCTTCTCTCCCTGATCCTCAGAATATATATTGTTG...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAAAGGAAAATTCCATCCTaGGTTTACTGGACAGAACTT +
Preference number: 4 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKRKIPS*VYWTEL
Trigger: AAGTTCTGTCCAGTAAACGCAGGATGGAATTTTCCT...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCATCAACAGGTATGTCATaGTTCATTCCTGCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPSTGMS*FIPAGN
Trigger: GTTGCCTGCAGGAATGAAGCATGACATACCTGTTGA...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGAAATATATAACAGGATaGTCCATCCCTCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWKYITG*SIPRRT
Trigger: TGTTCTCCGAGGGATGGAGCATCCTGTTATATATTT...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAATCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQSSEGL*FWFWIW
Trigger: CCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGA...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAATGAGATCTATTGCTaGCAAGAAGATCAATTCAAG +
Preference number: 4 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGNEIYC*QEDQFK
Trigger: CTTGAATTGATCTTCTTGCCAGCAATAGATCTCATT...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp GGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTTTAATGAGGGTCTGCCTGTGTCTTTaGTCTAGAATTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GWFIPLASLFFTKPSLMRVCLCL*SRIWSE
Trigger: CTCAGACCAAATTCTAGACCAAAGACACAGGCAGAC...CCTCATTAAACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTAGTCATGAGCTCTCATaGAAAGTTTCGTTTATACGG +
Preference number: 4 (lower is better)
Translates to: LPILYRQVDQSHELSWKVSHELS*KVSFIR
Trigger: CCGTATAAACGAAACTTTCCATGAGAGCTCATGACT...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
3UTR CAA 72 bp GACAGAACTTTCTGCCAGCTACACAGCACCGAAGAATaGCTTTTGAAAATGAGATCTATTGCTGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: DRTFCQLHSTEE*LLKMRSIAGKK
Trigger: CTTCTTGCCAGCAATAGATCTCATTTTCAAAAGCAATTCTTCGGTGCTGTGTAGCTGGCAGAAAGTTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
3UTR CAA 72 bp GCCAGTCTCCTTTATGTGAAGGGTTGGTTCATTCCTTaGGCATCTCTCTTCTTCACTAAGCCAAGTTTAATG +
Preference number: 4 (lower is better)
Translates to: ASLLYVKGWFIP*ASLFFTKPSLM
Trigger: CATTAAACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATAAAGGAGACTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAATCATGGTCTCCACAATaGTGTGGGTCGGTTTCACGA +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQSWSPQ*CGSVSR
Trigger: TCGTGAAACCGACCCACATCATTGTGGAGACCATGA...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTACATCTAATTCAGTATaGAAGCTCTGCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVTSNSV*KLCLST
Trigger: CGTGGAGAGGCAGAGCTTTCATACTGAATTAGATGT...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTGCTATTTCTTCCATCTaGACCAGGATTTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSAISSI*TRIWKV
Trigger: TACCTTCCAAATCCTGGTTCAGATGGAAGAAATAGC...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATACTATTGCAGGGGTTTTaGAGTGAAGAGCTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GDLVCLCLWSRIWSENLILLQGF*SEELCY
Trigger: ATAACAAAGCTCTTCACTTCAAAACCCCTGCAATAG...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp CAGGTGGTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCGTTTATACGGAGACATaGAGGTTGAGCATTATTACA +
Preference number: 4 (lower is better)
Translates to: QVVNVCKPSYCRGFEVKSVYTET*RLSIIT
Trigger: TGTAATAATGCTCAACCTTCATGTCTCCGTATAAAC...GCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTACCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTACAGTGAAATATGTATaGCTGCCAAAGATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFTVKYV*LPKMGF
Trigger: GAACCCCATCTTTGGCAGGCATACATATTTCACTGT...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTACAGTGAAATATGTATaGCTGCCAAAGATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSTVKYV*LPKMGF
Trigger: GAACCCCATCTTTGGCAGGCATACATATTTCACTGT...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGCAAAAGCTTGTATACTaGAAGACTGAACTACACACC +
Preference number: 4 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQQKLVY*KTELHT
Trigger: GGTGTGTAGTTCAGTCTTGCAGTATACAAGCTTTTG...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAAATGAGATCTATTGCTaGCAAGAAGATCAATTCAAG +
Preference number: 4 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQNEIYC*QEDQFK
Trigger: CTTGAATTGATCTTCTTGCCAGCAATAGATCTCATT...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGAATGAGATCTATTGCTaGCAAGAAGATCAATTCAAG +
Preference number: 4 (lower is better)
Translates to: KIPSCVYWTELSASYTAPNEIYC*QEDQFK
Trigger: CTTGAATTGATCTTCTTGCCAGCAATAGATCTCATT...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
3UTR CAA 72 bp TGCCCACCTCTACAAGTTTGGCTCTCTGGGTTTGTTTaGTTTAGTCTTGTGGTTTTGTACTTCGATTTTTGC +
Preference number: 4 (lower is better)
Translates to: CPPLQVWLSGFV*FSLVVLYFDFC
Trigger: GCAAAAATCGAAGTACAAAACCACAAGACTAAACAAAACAAACCCAGAGAGCCAAACTTGTAGAGGTGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS-3UTR TCA 90 bp GTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCTTTGTTGCAGGGGTTTTGAAGTaGAGAGCTTTGTTATATCCT +
Preference number: 4 (lower is better)
Translates to: VNVCKPSYCRGFEVKSFVAGVLK*RALLYP
Trigger: AGGATATAACAAAGCTCTTCACTTCAAAACCCCTGC...AACAAAGCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCTCAACAGGTATGTCATaGTTCATTCCTGCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVSTGMS*FIPAGN
Trigger: GTTGCCTGCAGGAATGAAGCATGACATACCTGTTGA...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTACAGTTGCTAGGGATTaGGAGATTAATTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCTVARD*EINWVK
Trigger: TTTTACCCAATTAATCTCCCAATCCCTAGCAACTGT...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR GCA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATCAAAAGCTTGTATACTaGAAGACTGAACTACACACC +
Preference number: 4 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNQKLVY*KTELHT
Trigger: GGTGTGTAGTTCAGTCTTGCAGTATACAAGCTTTTG...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CCA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCTCAACTTCAACAAACTaGCTATCCAGTCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVSTSTN*LSSPSK
Trigger: CTTGCTTGGACTGGATAGCCAGTTTGTTGAAGTTGA...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR TCA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAAACTTTAAGAGATGCTaGGATGTTGCTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQNFKRC*DVAWGM
Trigger: CATTCCCCAAGCAACATCTCAGCATCTCTTAAAGTT...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
3UTR CAA 72 bp TTGTATACTGCAAGACTGAACTACACACCAAGGATCTaGTTCAAATACAAATGTTCCTCCTCAGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LYTARLNYTPRI*FKYKCSSSEKS
Trigger: AGACTTTTCTGAGGAGGAACATTTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000622186.4
ENST00000649500.1
CDS GCA 90 bp GTCCACCTGGGGTGGCTGCGGCGCCGCCCGCGCTCTGCTCGGCTGTaGCGGGTTCCGCCGGCCGGGGGCTGCCTGCCCGCTCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: VHLGWLRRRPRSARL*RVPPAGGCLPARSL
Trigger: CAGAGAGCGAGCGGGCAGGCAGCCCCCGGCCGGCGGAACCCGGCACAGCCGAGCAGAGCGCGGGCGGCGCCGCAGCCACCCCAGGTGGAC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622810.4
CDS GCA 90 bp CTGGATCTGGGGTGGCTGCGGCGCCGCCCGCGCTCTGCTCGGCTGTaGCGGGTTCCGCCGGCCGGGGGCTGCCTGCCCGCTCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LDLGWLRRRPRSARL*RVPPAGGCLPARSL
Trigger: CAGAGAGCGAGCGGGCAGGCAGCCCCCGGCCGGCGGAACCCGGCACAGCCGAGCAGAGCGCGGGCGGCGCCGCAGCCACCCCAGATCCAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000649500.1
CDS GCA 90 bp CGCCCGCGCTCTGCTCGGCTGTGCCGGGTTCCGCCGGCCGGGGGCTaGCTGCCCGCTCGCTCTCTGACCCGCTGGGTGAACGCTCCGCAC +
Preference number: 5 (lower is better)
Translates to: RPRSARLCRVPPAGG*LPARSLTRWVNAPH
Trigger: GTGCGGAGCGTTCACCCAGCGGGTCAGAGAGCGAGCGGGCAGGCAGCCCCCGGCCGGCGGAACCCGGCACAGCCGAGCAGAGCGCGGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000622810.4
ENST00000649500.1
CDS CCA 90 bp CGCTGGGTGAACGCTCCGCACTCCCTCTTGGCGCAGCTTGTCCTCTaGGCTTGCGGTCCTCGGGGCTCGGCGTTGGCGGCGGCGCGAAGG +
Preference number: 5 (lower is better)
Translates to: RWVNAPHSLLAQLVL*ACGPRGSALAAARR
Trigger: CCTTCGCGCCGCCGCCAACGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGCGTTCACCCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000622810.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCCCTCGGGGCTCGGCGTaGGCGGCGGCGCGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: VSLTPASLLGSLAAPSLAPRGSA*AAARRK
Trigger: CTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAGG...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGCCTCGGGGCTCGGCGTaGGCGGCGGCGCGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SSHSPEDSGSCIPGEEIRPRGSA*AAARRK
Trigger: CTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAGG...CCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCGCTTGTCCTCTGGGCTaGCGGTCCTCGGGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: TNAQVATACQVPSSPRATACPLG*RSSGLG
Trigger: GCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGC...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GCACCCTCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGGCTCCGCACTCCCTCTaGGCGCAGCTTGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: APSSHSPEDSGSCIPGEEAPHSL*AQLVLW
Trigger: CCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGC...CTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGAGGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCCTCGGGGCTCGGCGTaGGCGGCGGCGCGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIPRGSA*AAARRK
Trigger: CTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAGG...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTGTGGCTGCTGCTGCTCCCCTCATCCCTGAACATGGAGGGGAGCGCATTTCCTGCTTGTCCTCTGGGCTaGCGGTCCTCGGGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: VWLLLLPSSLNMEGSAFPACPLG*RSSGLG
Trigger: GCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGC...AGGAAATGCGCTCCCCTCCATGTTCAGGGATGAGGGGAGCAGCAGCAGCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCTCCACAGCCCAGCGGTaGGGTTCCCTTGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLSTAQR*GSLGVS
Trigger: GCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGGA...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS CCA 90 bp ACGCTCTGGTCCCAGCCTCCAGCTCTAAGGCGGCTTTGTACTGGATaGGCTCCCCTGTGGCCCGGCCCAAGCTCACCTCCACCATTCTTG +
Preference number: 5 (lower is better)
Translates to: TLWSQPPALRRLCTG*APLWPGPSSPPPFL
Trigger: CAAGAATGGTGGAGGTGAGCTTGGGCCGGGCCACAGGGGAGCCCATCCAGTACAAAGCCGCCTTAGAGCTGGAGGCTGGGACCAGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS-3UTR CAA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGGACCTCGCGTGTCTGTaGTCTGAGCAGGCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: GDEERKHPSPTPGPSACLDLACL*SEQAAL
Trigger: GAGAGCTGCCTGCTCAGACAACAGACACGCGAGGTC...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS CCA 90 bp TGTCTGGGGCTTGGGAGACACAAGCCTGGCCTTGTCCTGCCTCTTTaGAGGTGGCAAACTGGAGGACCAGAGAGGCTGAGGGACCTGCTC +
Preference number: 5 (lower is better)
Translates to: CLGLGRHKPGLVLPL*RWQTGGPERLRDLL
Trigger: GAGCAGGTCCCTCAGCCTCTCTGGTCCTCCAGTTTGCCACCTCCAAAGAGGCAGGACAAGGCCAGGCTTGTGTCTCCCAAGCCCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS-3UTR CAA 90 bp AGGGGGAGGGCTGCCCCCTGCTTTCTGGACTGCCCACCTCTACAAGTTTGGCTCGGGGTCAGCAGGTACTaGACTCTCACAAGGAACGGC +
Preference number: 5 (lower is better)
Translates to: RGRAAPCFLDCPPLQVWLGVSRY*TLTRNG
Trigger: GCCGTTCCTTGTGAGAGTCAAGTACCTGCTGACCCC...GAGCCAAACTTGTAGAGGTGGGCAGTCCAGAAAGCAGGGGGCAGCCCTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GCACCCTCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGGGCCATCTCCTTGCTTaGTTTGGGAGCTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: APSSHSPEDSGSCIPGEEGHLLA*FGSSSE
Trigger: TTCTGAGGAGCTCCCAAACAAAGCAAGGAGATGGCC...CTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGAGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGTGGGGCCTATATCCTTaGGTCCACTCACCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: GDEERKHPSPTPGPSACLWGLYP*VHSPPH
Trigger: GTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCCA...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCGTTCAGAATTGCCCCTaGGGAGGGGGACACCAAAGG +
Preference number: 5 (lower is better)
Translates to: TNAQVATACQVPSSPRATVQNCP*GGGHQR
Trigger: CCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAAC...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS CCA 90 bp GGGCTTGGGAGACACAAGCCTGGCCTTGTCCTGCCTCTTTGGAGGTaGCAAACTGGAGGACCAGAGAGGCTGAGGGACCTGCTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: GLGRHKPGLVLPLWR*QTGGPERLRDLLKV
Trigger: TACCTTGAGCAGGTCCCTCAGCCTCTCTGGTCCTCCAGTTTGCCACCTCCAAAGAGGCAGGACAAGGCCAGGCTTGTGTCTCCCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGCCTCGGGGCTCGGCGTaGGCGGCGGCGCGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQPRGSA*AAARRK
Trigger: CTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAGG...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGCTTGTCCTCTGGGCTaGCGGTCCTCGGGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTACPLG*RSSGLG
Trigger: GCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGC...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CTCCCCACCACTCCCCTAGTCCCTCAACAGGTATGTCATGCTTCATTCCTGCAGCCCTCTTGGCGCAGCTaGTCCTCTGGGCTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: LPTTPLVPQQVCHASFLQPSWRS*SSGLAV
Trigger: GACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGG...CTGCAGGAATGAAGCATGACATACCTGTTGAGGGACTAGGGGAGTGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGTCCACAGCCCAGCGGTaGGGTTCCCTTGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VRHSPFPAPTSENLQLELSTAQR*GSLGVS
Trigger: GCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGGA...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCGTGCCTTGGGGAGAGTaGAGGAACGACTTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: TNAQVATACQVPSSPRATVPWGE*RNDFLP
Trigger: TGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCAC...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGAGCACAAAGTCGATCTaGCTAGACCACTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWSTKSI*LDHFSL
Trigger: GAGGGAGAAGTGGTCTAGCAAGATCGACTTTGTGCT...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGGGACCAGTGTGGCGGTACCCGGGTGATACAAGAGTGCCCTGAAGTGGGCTGGATGCTGAGATGTTGCTaGGGGAATGACCAGAACCTG +
Preference number: 5 (lower is better)
Translates to: GDQCGGTRVIQECPEVGWMLRCC*GNDQNL
Trigger: CAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCAT...CCAGCCCACTTCAGGGCACTCTTGTATCACCCGGGTACCGCCACACTGGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACATGGGGCCTATATCCTTaGGTCCACTCACCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTWGLYP*VHSPPH
Trigger: GTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCCA...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCGTGCCTTGGGGAGAGTaGAGGAACGACTTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGVPWGE*RNDFLP
Trigger: TGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCAC...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS GCA 90 bp CTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCCATCCTCTCTaGCCCACCCATGTCCTCCTCCTTGCTTCAATGAGGTGGCCTTAC +
Preference number: 5 (lower is better)
Translates to: LLYPRGGDKEVGHPL*PTHVLLLASMRWPY
Trigger: GTAAGGCCACCTCATTGAAGCAAGGAGGAGGACATGGGTGGGGCAGAGAGGATGGCCCACTTCCTTATCTCCTCCCCTGGGATACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp AGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGAGGATAGCCCAATGGCCCAGTaGGGGTACACGTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: STTGCPCSELGALPPVEDSPMAQ*GYTYVL
Trigger: CAAAACATACGTGTACCCCAACTGGGCCATTGGGCT...ATCCTCCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGGGGTCAGCAGGTACTaGACTCTCACAAGGAACGGC +
Preference number: 5 (lower is better)
Translates to: IWLAGLCAGISISDPSQAGVSRY*TLTRNG
Trigger: GCCGTTCCTTGTGAGAGTCAAGTACCTGCTGACCCC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGGACCTCGCGTGTCTGTaGTCTGAGCAGGCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: VRHSPFPAPTSENLQLELDLACL*SEQAAL
Trigger: GAGAGCTGCCTGCTCAGACAACAGACACGCGAGGTC...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATACCTCGGGGCTCGGCGTaGGCGGCGGCGCGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: GDLVCLCLWSRIWSENLIPRGSA*AAARRK
Trigger: CTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAGG...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGCCTCGGGGCTCGGCGTaGGCGGCGGCGCGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ENKIRYEKRTWCPLMASAPRGSA*AAARRK
Trigger: CTTCCTTCGCGCCGCCGCCAACGCCGAGCCCCGAGG...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGGCTTGTCCTCTGGGCTaGCGGTCCTCGGGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQACPLG*RSSGLG
Trigger: GCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGC...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGCTCCGCACTCCCTCTaGGCGCAGCTTGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTAPHSL*AQLVLW
Trigger: CCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGC...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TCCTCCCACTCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGATCTCCTTGCTTTGTTaGGGAGCTCCTCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SSHSPEDSGSCIPGEEIRISLLC*GAPQKG
Trigger: GCCCTTCTGAGGAGCTCCCAAACAAAGCAAGGAGAT...CCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGAGTGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp TCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCCTTGGTGGCCATCTCCTaGCTTTGTTTGGGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SPEDSGSCIPGEEIRKWALVAIS*LCLGAP
Trigger: AGGAGCTCCCAAACAAAGCAAGGAGATGGCCACCAA...GGCCCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp GTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTAGAGCTGTGTTCTTGGTGTGCCTaGCTAGGTGCCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: VRHSPFPAPTSENLQLELCSWCA*LGARAA
Trigger: GGCTGCCCTGGCACCTAGCAAGGCACACCAAGAACA...CAGCTCTAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGACTCAAAAGCTGTTCTaGGTGTGCCTTGCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWTQKLF*VCLARC
Trigger: GCACCTAGCAAGGCACACCAAGAACAGCTTTTGAGT...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCAGCGGGGCCTGGGGACTaGGTCTGCCTGTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPAGPGD*VCLCLW
Trigger: CCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCGC...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACATTGGAGACAGGTGCCTaGGGGAGAGTTGAGGAACGA +
Preference number: 5 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTLETGA*GRVEER
Trigger: TCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCAA...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TCCCCCGAAGACAGTGGCTCCTGTATCCCAGGGGAGGAGATAAGGAAGTGGGCCAGCACAAAGTCGATCTaGCTAGACCACTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SPEDSGSCIPGEEIRKWASTKSI*LDHFSL
Trigger: GAGGGAGAAGTGGTCTAGCAAGATCGACTTTGTGCT...GGCCCACTTCCTTATCTCCTCCCCTGGGATACAGGAGCCACTGTCTTCGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp GGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAGCTCCGCACTCCCTCTaGGCGCAGCTTGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GLCPFSIDRWTRVMSSHGAPHSL*AQLVLW
Trigger: CCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGC...TCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACATTGGTGGCCATCTCCTaGCTTTGTTTGGGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTLVAIS*LCLGAP
Trigger: AGGAGCTCCCAAACAAAGCAAGGAGATGGCCACCAA...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR CAA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGATGTTCTTGGTGTGCCTaGCTAGGTGCCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRCSWCA*LGARAA
Trigger: GGCTGCCCTGGCACCTAGCAAGGCACACCAAGAACA...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGACCACACCTAGGCCTTCTCTTTaGGGTCCGCAGGTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: WPFTQGAPAGEMETEMTTPRPSL*GPQVVN
Trigger: ATTTACCACCTGCGGACCCAAAAGAGAAGGCCTAGG...TGTGGTCATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGTGCCTTGGGGAGAGTaGAGGAACGACTTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: IWLAGLCAGISISDPSQAVPWGE*RNDFLP
Trigger: TGGAAGGAAGTCGTTCCTCAACTCTCCCCAAGGCAC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCGTTGTCAGGAAGACCTaGAGGATGTTGCTGGATGTA +
Preference number: 5 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCVVRKT*RMLLDV
Trigger: TACATCCAGCAACATCCTCAAGGTCTTCCTGACAAC...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ATACTGTGGCCTTTCACCCAGGGAGCCCCCGCTGGGGAGATGGAAACTGAAATGGGGTCCTTTCCTGGCTaGTGTCTGAATCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ILWPFTQGAPAGEMETEMGSFPG*CLNLGW
Trigger: CCACCCAAGATTCAGACACAAGCCAGGAAAGGACCC...CATTTCAGTTTCCATCTCCCCAGCGGGGGCTCCCTGGGTGAAAGGCCACAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ACAAATGCCCAGGTAGCCACTGCGTGCCAAGTCCCCTCTTCCCCACGTGCCACCCCCACCTCTACAAGTTaGGCTCTCTGGGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: TNAQVATACQVPSSPRATPTSTS*ALWVCF
Trigger: AAAACAAACCCAGAGAGCCAAACTTGTAGAGGTGGG...GGTGGCACGTGGGGAAGAGGGGACTTGGCACGCAGTGGCTACCTGGGCATTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AGTAAGTGGCAGAACTGGGATTCCAGTCCTGTCTATGGCCAAAGGCATAAATTTGCTTGTCCTCTGGGCTaGCGGTCCTCGGGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: SKWQNWDSSPVYGQRHKFACPLG*RSSGLG
Trigger: GCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGC...AAATTTATGCCTTTGGCCATAGACAGGACTGGAATCCCAGTTCTGCCACTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGCCCTCTTGGCGCAGCTaGTCCTCTGGGCTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQPSWRS*SSGLAV
Trigger: GACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGG...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTCCCTCTTGGCGCAGCTaGTCCTCTGGGCTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: LESDFCYRASSFSFSQSPPSWRS*SSGLAV
Trigger: GACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGG...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGGCTCCGCACTCCCTCTaGGCGCAGCTTGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQAPHSL*AQLVLW
Trigger: CCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGC...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTGCTCCGCACTCCCTCTaGGCGCAGCTTGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTAPHSL*AQLVLW
Trigger: CCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGC...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGGAGTTCAGAATTGCCCCTaGGGAGGGGGACACCAAAGG +
Preference number: 5 (lower is better)
Translates to: SGTPLASLHLSSLFHKQGVQNCP*GGGHQR
Trigger: CCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAAC...TCCCTGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGGCGGGGCCTGGGGACTaGGTCTGCCTGTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: KIPSCVYWTELSASYTAPAGPGD*VCLCLW
Trigger: CCAAAGACACAGGCAGACCAAGTCCCCAGGCCCCGC...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCGGGTCCTTTCCTGGCTaGTGTCTGAATCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFGSFPG*CLNLGW
Trigger: CCACCCAAGATTCAGACACAAGCCAGGAAAGGACCC...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGTCAGGGGTACGTACTaGACGAGCGAGAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: IWLAGLCAGISISDPSQAVRGTY*TSEKMK
Trigger: TTTCATCTTCTCGCTCGTCAAGTACGTACCCCTGAC...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCATGGGGCCTATATCCTTaGGTCCACTCACCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAWGLYP*VHSPPH
Trigger: GTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCCA...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAACTCAAAAGCTGTTCTaGGTGTGCCTTGCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: IWLAGLCAGISISDPSQATQKLF*VCLARC
Trigger: GCACCTAGCAAGGCACACCAAGAACAGCTTTTGAGT...TGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCCTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFLHIRP*IKPVLR
Trigger: CCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAG...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CCTCCTGTGCCTCTGCCACCTCTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCCAGAATGTTGCAATTaGCCTACCAACCCAAAATAC +
Preference number: 5 (lower is better)
Translates to: PPVPLPPLARLSCEPHSCPECCN*PTNPKY
Trigger: GTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGG...GCAGGAGTGAGGCTCACAACTCAGCCTCGCAAGAGGTGGCAGAGGCACAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGAGATGAGGAAAGAAAGCACCCCTCCCCGACACCGGGCCCATCTGCATGCCTGAATACAGAGTCACAGTaGCTAGGGATTGGGAGATTA +
Preference number: 5 (lower is better)
Translates to: GDEERKHPSPTPGPSACLNTESQ*LGIGRL
Trigger: TAATCTCCCAATCCCTAGCAACTGTGACTCTGTATT...CAGGCATGCAGATGGGCCCGGTGTCGGGGAGGGGTGCTTTCTTTCCTCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GATTTAAACAACCCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCAGCCCAATGGCCCAGTaGGGGTACACGTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: DLNNPLASFPDLAGWAMCSPMAQ*GYTYVL
Trigger: CAAAACATACGTGTACCCCAACTGGGCCATTGGGCT...GCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGGGTTGTTTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGACCTCGCGTGTCTGTaGTCTGAGCAGGCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHDLACL*SEQAAL
Trigger: GAGAGCTGCCTGCTCAGACAACAGACACGCGAGGTC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CAA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTCCCTCTTGGCGCAGCTaGTCCTCTGGGCTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCPSWRS*SSGLAV
Trigger: GACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGG...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CAGAACTGGGATTCCAGTCCTGTCTATGGCCAAAGGCATAAATTTATCTCCAGACCCTCTTGGCGCAGCTaGTCCTCTGGGCTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: QNWDSSPVYGQRHKFISRPSWRS*SSGLAV
Trigger: GACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGG...TCTGGAGATAAATTTATGCCTTTGGCCATAGACAGGACTGGAATCCCAGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS-3UTR CAA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGCCCTCTTGGCGCAGCTaGTCCTCTGGGCTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: ENKIRYEKRTWCPLMASAPSWRS*SSGLAV
Trigger: GACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGG...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CAA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGGCTCCGCACTCCCTCTaGGCGCAGCTTGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ENKIRYEKRTWCPLMASAAPHSL*AQLVLW
Trigger: CCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGC...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CAA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCATGCTGAGATGTTGCTaGGGGAATGACCAGAACCTG +
Preference number: 5 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFMLRCC*GNDQNL
Trigger: CAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCAT...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AACAGGATGCTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCATCTTTAATGAGGGCTaGGCAGGAGTCTCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: NRMLHPSENTPEHVCSDTIFNEG*AGVSQA
Trigger: AGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGAT...GGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAGCATCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGAGGCCCTACTCAAAAGCTGTTCTaGGTGTGCCTTGCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: LSYLIYNKGVGLGDPGGPTQKLF*VCLARC
Trigger: GCACCTAGCAAGGCACACCAAGAACAGCTTTTGAGT...AGGGCCTCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CTCCATCCCTCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGACCTAGGCCTTCTCTTTaGGGTCCGCAGGTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LHPSENTPEHVCSDTHKRPRPSL*GPQVVN
Trigger: ATTTACCACCTGCGGACCCAAAAGAGAAGGCCTAGG...TCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGAGGGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AGGTCAGCACCACGGGCTGCCCTTGTTCTGAACTGGGAGCACTTCCCCCAGTGGTCATTTAGACTGAGCTaGGAAGTGACTGTTCAAATG +
Preference number: 5 (lower is better)
Translates to: RSAPRAALVLNWEHFPQWSFRLS*EVTVQM
Trigger: CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGA...CCACTGGGGGAAGTGCTCCCAGTTCAGAACAAGGGCAGCCCGTGGTGCTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACATTGGAGACAGGTGCCTaGGGGAGAGTTGAGGAACGA +
Preference number: 5 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTLETGA*GRVEER
Trigger: TCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCAA...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GCCCTGGTTAGACACTCACCATTCCCTGCACCTACCTCGGAGAACCTGCAGCTACCCACCTCTACAAGTTaGGCTCTCTGGGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: ALVRHSPFPAPTSENLQLPTSTS*ALWVCF
Trigger: AAAACAAACCCAGAGAGCCAAACTTGTAGAGGTGGG...TAGCTGCAGGTTCTCCGAGGTAGGTGCAGGGAATGGTGAGTGTCTAACCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCAGCTCCCTCTCTGGCCAATACAGAGTCACAGTaGCTAGGGATTGGGAGATTA +
Preference number: 5 (lower is better)
Translates to: VSLTPASLLGSLAAPSLANTESQ*LGIGRL
Trigger: TAATCTCCCAATCCCTAGCAACTGTGACTCTGTATT...GGCCAGAGAGGGAGCTGCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCACAAACAGGCCATCTCCTTGCTTaGTTTGGGAGCTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: RIWHTSGFSAPQFPLSQTGHLLA*FGSSSE
Trigger: TTCTGAGGAGCTCCCAAACAAAGCAAGGAGATGGCC...TGTTTGTGAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGGACAAGCTCAGCACGTaGCGCTCCCAGAACTCGATG +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQDKLST*RSQNSM
Trigger: CATCGAGTTCTGGGAGCGCAACGTGCTGAGCTTGTC...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAAGTTCAGAATTGCCCCTaGGGAGGGGGACACCAAAGG +
Preference number: 5 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQVQNCP*GGGHQR
Trigger: CCTTTGGTGTCCCCCTCCCAAGGGGCAATTCTGAAC...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATTGGAGACAGGTGCCTaGGGGAGAGTTGAGGAACGA +
Preference number: 5 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKLETGA*GRVEER
Trigger: TCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCAA...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AAATGGCACAGTTTAGGTCCAAATAGGGGCTGGGTGGGGGTGTGTCTGCCCTGGCATAAAGGCTTGTCTTaGGTTGTCAGGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: KWHSLGPNRGWVGVCLPWHKGLS*VVRKTL
Trigger: CAAGGTCTTCCTGACAACCAAAGACAAGCCTTTATG...CCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGACCTAAACTGTGCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CAGGTGGTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCGGGGTCAGCAGGTACTaGACTCTCACAAGGAACGGC +
Preference number: 5 (lower is better)
Translates to: QVVNVCKPSYCRGFEVKSGVSRY*TLTRNG
Trigger: GCCGTTCCTTGTGAGAGTCAAGTACCTGCTGACCCC...GCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTACCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTCCACAGCCCAGCGGTaGGGTTCCCTTGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNSTAQR*GSLGVS
Trigger: GCTGACCCCAAGGGAACCCAACCGCTGGGCTGTGGA...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCTTTCCCTTTATGTGAAGGGTaGGTTCATTCCTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: LPKDLAHLWLLCTSVPSFPLCEG*VHSFGI
Trigger: GATGCCAAAGGAATGAACCAACCCTTCACATAAAGG...GAAAGAGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GCGACTTCATCTAAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCAATGCTGAGATGTTGCTaGGGGAATGACCAGAACCTG +
Preference number: 5 (lower is better)
Translates to: ATSSKSCLRIWHTSGFSAMLRCC*GNDQNL
Trigger: CAGGTTCTGGTCATTCCCCAAGCAACATCTCAGCAT...TGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTTAGATGAAGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGGGACTTGGTCTGCCTGTGTCTTTGGTCTAGAATTTGGTCTGAGAATCTTATATGTTCTTGGTGTGCCTaGCTAGGTGCCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GDLVCLCLWSRIWSENLICSWCA*LGARAA
Trigger: GGCTGCCCTGGCACCTAGCAAGGCACACCAAGAACA...TATAAGATTCTCAGACCAAATTCTAGACCAAAGACACAGGCAGACCAAGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CTTGCGAGGCTGAGTTGTGAGCCTCACTCCTGCCAGCCTTCTTGGATCTCTAGCACCTGCCCTCAATCATaGACAGTGGTTAGTTTACTA +
Preference number: 5 (lower is better)
Translates to: LARLSCEPHSCQPSWISSTCPQS*TVVSLL
Trigger: TAGTAAACTAACCACTGTCAATGATTGAGGGCAGGT...GCTAGAGATCCAAGAAGGCTGGCAGGAGTGAGGCTCACAACTCAGCCTCGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTGTTGTCAGGAAGACCTaGAGGATGTTGCTGGATGTA +
Preference number: 5 (lower is better)
Translates to: VRASAFLTHPKQKAGEGLVVRKT*RMLLDV
Trigger: TACATCCAGCAACATCCTCAAGGTCTTCCTGACAAC...AAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAGGCCTTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATGCTGTGCTCTCCCCTaGTGTTTCCCCACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: EAFLRPCPECCNLPTNPKCCALP*CFPTVF
Trigger: AAAGACAGTGGGGAAACACAAGGGGAGAGCACAGCA...TTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCAAGGCTACACACCAAGGATCTaGTTCAAATACAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: GAAHGPGVMLSWKESIQGYTPRI*FKYKCS
Trigger: GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTA...GCCTTGGATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGATCTCCTTGCTTTGTTaGGGAGCTCCTCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQISLLC*GAPQKG
Trigger: GCCCTTCTGAGGAGCTCCCAAACAAAGCAAGGAGAT...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACGGCCATCTCCTTGCTTaGTTTGGGAGCTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHGHLLA*FGSSSE
Trigger: TTCTGAGGAGCTCCCAAACAAAGCAAGGAGATGGCC...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGGGCCATCTCCTTGCTTaGTTTGGGAGCTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQGHLLA*FGSSSE
Trigger: TTCTGAGGAGCTCCCAAACAAAGCAAGGAGATGGCC...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGTTGGTGGCCATCTCCTaGCTTTGTTTGGGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQLVAIS*LCLGAP
Trigger: AGGAGCTCCCAAACAAAGCAAGGAGATGGCCACCAA...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610642.4
ENST00000622176.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGGACAAGCTCAGCACGTaGCGCTCCCAGAACTCGATG +
Preference number: 5 (lower is better)
Translates to: ENKIRYEKRTWCPLMASADKLST*RSQNSM
Trigger: CATCGAGTTCTGGGAGCGCAACGTGCTGAGCTTGTC...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CAA 90 bp CACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGGCACAGGACAAGCTCAGCACGTaGCGCTCCCAGAACTCGATG +
Preference number: 5 (lower is better)
Translates to: HVSVSFRLSLEVTVQMAQDKLST*RSQNSM
Trigger: CATCGAGTTCTGGGAGCGCAACGTGCTGAGCTTGTC...CTGTGCCATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAGGCCATCTCCTTGGTTaGGGAGCTCCTCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLGHLLG*GAPQKG
Trigger: GCCCTTCTGAGGAGCTCCCAAACCAAGGAGATGGCC...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CAA 90 bp AGTGAAGGAGCTGCACATGGCCCAGGGGTTATGCTGTCCTGGAAGGAGAGCATCCACAGCACCGAAGAATaGCTTTTGAAAATGAGATCT +
Preference number: 5 (lower is better)
Translates to: SEGAAHGPGVMLSWKESIHSTEE*LLKMRS
Trigger: AGATCTCATTTTCAAAAGCAATTCTTCGGTGCTGTG...GATGCTCTCCTTCCAGGACAGCATAACCCCTGGGCCATGTGCAGCTCCTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AAATCCTGCCTAAGGATCTGGCACACCTCTGGCTTCTCTGCACCTCAGTTCCCTCCTTTATGTGAAGGGTaGGTTCATTCCTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: KSCLRIWHTSGFSAPQFPPLCEG*VHSFGI
Trigger: GATGCCAAAGGAATGAACCAACCCTTCACATAAAGG...AGGGAACTGAGGTGCAGAGAAGCCAGAGGTGTGCCAGATCCTTAGGCAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTATCTTTAATGAGGGCTaGGCAGGAGTCTCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LESDFCYRASSFSFSQSPIFNEG*AGVSQA
Trigger: AGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGAT...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CTGAGCCTCAGTTACCTCATTTACAACAAGGGCGTTGGGTTAGGGGACCCTGGACATAAAGGCTTGTCTTaGGTTGTCAGGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: LSLSYLIYNKGVGLGDPGHKGLS*VVRKTL
Trigger: CAAGGTCTTCCTGACAACCAAAGACAAGCCTTTATG...TCCAGGGTCCCCTAACCCAACGCCCTTGTTGTAAATGAGGTAACTGAGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TCGGAGAACACGCCAGAACATGTCTGTAGTGACACCCACAAGAGAACAATGCAATGCTGTGCTCTCCCCTaGTGTTTCCCCACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SENTPEHVCSDTHKRTMQCCALP*CFPTVF
Trigger: AAAGACAGTGGGGAAACACAAGGGGAGAGCACAGCA...TTGCATTGTTCTCTTGTGGGTGTCACTACAGACATGTTCTGGCGTGTTCTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTGTCAGGGGTACGTACTaGACGAGCGAGAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: LESDFCYRASSFSFSQSPVRGTY*TSEKMK
Trigger: TTTCATCTTCTCGCTCGTCAAGTACGTACCCCTGAC...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GGTCCTGCACAACCAAGTTCTGAAACTGTGAAAACATCCAGTCACACCTCACACAGCACAAAGTCGATCTaGCTAGACCACTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GPAQPSSETVKTSSHTSHSTKSI*LDHFSL
Trigger: GAGGGAGAAGTGGTCTAGCAAGATCGACTTTGTGCT...GTGTGAGGTGTGACTGGATGTTTTCACAGTTTCAGAACTTGGTTGTGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610642.4
CDS-3UTR CAA 90 bp AAAATTCCATCCTGCGTTTACTGGACAGAACTTTCTGCCAGCTACACAGCACCGAGCACAAAGTCGATCTaGCTAGACCACTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: KIPSCVYWTELSASYTAPSTKSI*LDHFSL
Trigger: GAGGGAGAAGTGGTCTAGCAAGATCGACTTTGTGCT...CGGTGCTGTGTAGCTGGCAGAAAGTTCTGTCCAGTAAACGCAGGATGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTGCCCCTTGGATCTCCTTGCTTTGTTaGGGAGCTCCTCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: ETVKYVCLPKMGFRIAPWISLLC*GAPQKG
Trigger: GCCCTTCTGAGGAGCTCCCAAACAAAGCAAGGAGAT...CCAAGGGGCAATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR CAA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCAGACAAGCTCAGCACGTaGCGCTCCCAGAACTCGATG +
Preference number: 5 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPDKLST*RSQNSM
Trigger: CATCGAGTTCTGGGAGCGCAACGTGCTGAGCTTGTC...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCACCTTTATGTGAAGGGTaGGTTCATTCCTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPPLCEG*VHSFGI
Trigger: GATGCCAAAGGAATGAACCAACCCTTCACATAAAGG...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAAATCTTTAATGAGGGCTaGGCAGGAGTCTCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKIFNEG*AGVSQA
Trigger: AGCCTGGGAGACTCCTGCCAAGCCCTCATTAAAGAT...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAACTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKLHIRP*IKPVLR
Trigger: CCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAG...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GCCCAGCCCAATGGCCCAGTTGGGGTACACGTATGTTTTGTTGTAGGTCAGGGGTTTGTACTTCGATTTTaGCACACAGTGGTATTTACC +
Preference number: 5 (lower is better)
Translates to: AQPNGPVGVHVCFVVGQGFVLRF*HTVVFT
Trigger: GGTAAATACCACTGTGTGCAAAAATCGAAGTACAAA...CCCCTGACCTACAACAAAACATACGTGTACCCCAACTGGGCCATTGGGCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTGTCAGGGGTACGTACTaGACGAGCGAGAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: LPILYRQVDQSHELSWKVVRGTY*TSEKMK
Trigger: TTTCATCTTCTCGCTCGTCAAGTACGTACCCCTGAC...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTAGCACAAAGTCGATCTaGCTAGACCACTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LPILYRQVDQSHELSWKVSTKSI*LDHFSL
Trigger: GAGGGAGAAGTGGTCTAGCAAGATCGACTTTGTGCT...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGTTGGTGGCCATCTCCTaGCTTTGTTTGGGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: ENKIRYEKRTWCPLMASALVAIS*LCLGAP
Trigger: AGGAGCTCCCAAACAAAGCAAGGAGATGGCCACCAA...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CAA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAGACCTCGCGTGTCTGTaGTCTGAGCAGGCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQDLACL*SEQAAL
Trigger: GAGAGCTGCCTGCTCAGACAACAGACACGCGAGGTC...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAAGGCCATCTCCTTGGTTaGGGAGCTCCTCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQGHLLG*GAPQKG
Trigger: GCCCTTCTGAGGAGCTCCCAAACCAAGGAGATGGCC...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS-3UTR CAA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCACACAGCACCGAAGAATaGCTTTTGAAAATGAGATCT +
Preference number: 5 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPHSTEE*LLKMRS
Trigger: AGATCTCATTTTCAAAAGCAATTCTTCGGTGCTGTG...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAAAGCTCTGCCTCTCCACGGACATCTTCCCGTGGGTTTTCTTTTTGTACAAAAGTTGTCAGGAAGACCTaGAGGATGTTGCTGGATGTA +
Preference number: 5 (lower is better)
Translates to: ESSASPRTSSRGFSFCTKVVRKT*RMLLDV
Trigger: TACATCCAGCAACATCCTCAAGGTCTTCCTGACAAC...TTTTGTACAAAAAGAAAACCCACGGGAAGATGTCCGTGGAGAGGCAGAGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTTGCTGTGCTCTCCCCTaGTGTTTCCCCACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSCCALP*CFPTVF
Trigger: AAAGACAGTGGGGAAACACAAGGGGAGAGCACAGCA...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GAAAATAAAATACGGTATGAGAAACGCACCTGGTGTCCACTAATGGCTTCAGCGTCTAGTGTATGTGCTTaGTTCTGGGGAGCGTCTAGG +
Preference number: 5 (lower is better)
Translates to: ENKIRYEKRTWCPLMASASSVCA*FWGASR
Trigger: CCTAGACGCTCCCCAGAACAAAGCACATACACTAGA...CGCTGAAGCCATTAGTGGACACCAGGTGCGTTTCTCATACCGTATTTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622176.4
CDS-3UTR CAA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTACCTGCCCTCAATCATaGACAGTGGTTAGTTTACTA +
Preference number: 5 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTTCPQS*TVVSLL
Trigger: TAGTAAACTAACCACTGTCAATGATTGAGGGCAGGT...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CAGGTGGTAAATGTCTGTAAACCCAGCTATTGCAGGGGTTTTGAAGTGAAGAGCCATAAAGGCTTGTCTTaGGTTGTCAGGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: QVVNVCKPSYCRGFEVKSHKGLS*VVRKTL
Trigger: CAAGGTCTTCCTGACAACCAAAGACAAGCCTTTATG...GCTCTTCACTTCAAAACCCCTGCAATAGCTGGGTTTACAGACATTTACCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TGTAGTAGACATTCAGGAGGGACACAATTACAACGGAGGCATAGCCGATACCAGCTTTTCCATAAAGGCTaGTCTTTGGTTGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CSRHSGGTQLQRRHSRYQLFHKG*SLVVRK
Trigger: CTTCCTGACAACCAAAGACAAGCCTTTATGGAAAAG...CTGGTATCGGCTATGCCTCCGTTGTAATTGTGTCCCTCCTGAATGTCTACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649500.1
CDS-3UTR CAA 90 bp TCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCATTTGTACTTCGATTTTaGCACACAGTGGTATTTACC +
Preference number: 5 (lower is better)
Translates to: SLLVQRQPLLHIRPLIKPFVLRF*HTVVFT
Trigger: GGTAAATACCACTGTGTGCAAAAATCGAAGTACAAA...TGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTAGAATCAGACTTCTGCTATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTAATACAGAGTCACAGTaGCTAGGGATTGGGAGATTA +
Preference number: 5 (lower is better)
Translates to: LESDFCYRASSFSFSQSPNTESQ*LGIGRL
Trigger: TAATCTCCCAATCCCTAGCAACTGTGACTCTGTATT...AGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATAGCAGAAGTCTGATTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TATAGGGCCTCCTCATTCAGCTTCAGCCAGTCTCCTTTATGTGAAGGGTTGGTTCACAGCACCGAAGAATaGCTTTTGAAAATGAGATCT +
Preference number: 5 (lower is better)
Translates to: YRASSFSFSQSPLCEGLVHSTEE*LLKMRS
Trigger: AGATCTCATTTTCAAAAGCAATTCTTCGGTGCTGTG...AACCAACCCTTCACATAAAGGAGACTGGCTGAAGCTGAATGAGGAGGCCCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTAGTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCTAGGCCTTCTCTTTaGGGTCCGCAGGTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LVLWFCTSIFAHSGIYRVPRPSL*GPQVVN
Trigger: ATTTACCACCTGCGGACCCAAAAGAGAAGGCCTAGG...GACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTTGCTTGGGGAATGACCAGAACCTGCTATGACCCCATTCAAATGCAACAGACTTCATTTAGACTGAGCTaGGAAGTGACTGTTCAAATG +
Preference number: 5 (lower is better)
Translates to: VAWGMTRTCYDPIQMQQTSFRLS*EVTVQM
Trigger: CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGA...AGTCTGTTGCATTTGAATGGGGTCATAGCAGGTTCTGGTCATTCCCCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTACCTGCCCTCAATCATaGACAGTGGTTAGTTTACTA +
Preference number: 5 (lower is better)
Translates to: LPILYRQVDQSHELSWKVTCPQS*TVVSLL
Trigger: TAGTAAACTAACCACTGTCAATGATTGAGGGCAGGT...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTCTTTTCCATAAAGGCTaGTCTTTGGTTGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LPILYRQVDQSHELSWKVLFHKG*SLVVRK
Trigger: CTTCCTGACAACCAAAGACAAGCCTTTATGGAAAAG...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GTCTTGTGGTTTTGTACTTCGATTTTTGCACACAGTGGTATTTACCGTGTCCCACCCACCTCTACAAGTTaGGCTCTCTGGGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: VLWFCTSIFAHSGIYRVPPTSTS*ALWVCF
Trigger: AAAACAAACCCAGAGAGCCAAACTTGTAGAGGTGGG...TGGGACACGGTAAATACCACTGTGTGCAAAAATCGAAGTACAAAACCACAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp AAGCTTGTATACTGCAAGACTGAACTACACACCAAGGATCTTGTTCAAATACAACTCCACATAAGGCCCTaGATCAAGCCAGTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: KLVYCKTELHTKDLVQIQLHIRP*IKPVLR
Trigger: CCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAG...TTGTATTTGAACAAGATCCTTGGTGTGTAGTTCAGTCTTGCAGTATACAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTCCTCAGGCCATGTCCAGAATGTTGCAATTTGCCTACCAACCCAAAATACTGTCCAGAATGTTGCAATTaGCCTACCAACCCAAAATAC +
Preference number: 5 (lower is better)
Translates to: FLRPCPECCNLPTNPKYCPECCN*PTNPKY
Trigger: GTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGG...ACAGTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGGACATGGCCTGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTAACAAGATAGAATCGTaGAGAGTTTGGAATAGGACT +
Preference number: 5 (lower is better)
Translates to: LPILYRQVDQSHELSWKVNKIES*RVWNRT
Trigger: AGTCCTATTCCAAACTCTCAACGATTCTATCTTGTT...AACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTCTTTTCCATAAAGGCTaGTCTTTGGTTGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSLFHKG*SLVVRK
Trigger: CTTCCTGACAACCAAAGACAAGCCTTTATGGAAAAG...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATCCAGAATGTTGCAATTaGCCTACCAACCCAAAATAC +
Preference number: 5 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNPECCN*PTNPKY
Trigger: GTATTTTGGGTTGGTAGGCAAATTGCAACATTCTGG...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp CGTGGTCACGTTTCGGTTTCATTTAGACTGAGCTTGGAAGTGACTGTTCAAATGTTTGTACTTCGATTTTaGCACACAGTGGTATTTACC +
Preference number: 5 (lower is better)
Translates to: RGHVSVSFRLSLEVTVQMFVLRF*HTVVFT
Trigger: GGTAAATACCACTGTGTGCAAAAATCGAAGTACAAA...CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGAAACCGAAACGTGACCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp GATAGCTTTGGAAACAGTGAAATATGTATGCCTGCCAAAGATGGGGTTCAGAATTCATTTAGACTGAGCTaGGAAGTGACTGTTCAAATG +
Preference number: 5 (lower is better)
Translates to: DSFGNSEICMPAKDGVQNSFRLS*EVTVQM
Trigger: CATTTGAACAGTCACTTCCAAGCTCAGTCTAAATGA...ATTCTGAACCCCATCTTTGGCAGGCATACATATTTCACTGTTTCCAAAGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TATGTGAAGGGTTGGTTCATTCCTTTGGCATCTCTCTTCTTCACTAAGCCAAGTAACAAGATAGAATCGTaGAGAGTTTGGAATAGGACT +
Preference number: 5 (lower is better)
Translates to: YVKGWFIPLASLFFTKPSNKIES*RVWNRT
Trigger: AGTCCTATTCCAAACTCTCAACGATTCTATCTTGTT...ACTTGGCTTAGTGAAGAAGAGAGATGCCAAAGGAATGAACCAACCCTTCACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTAACAAGATAGAATCGTaGAGAGTTTGGAATAGGACT +
Preference number: 5 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFNKIES*RVWNRT
Trigger: AGTCCTATTCCAAACTCTCAACGATTCTATCTTGTT...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp ATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTTACACACCAAGGATCTaGTTCAAATACAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: ILYRQVDQSHELSWKVSFYTPRI*FKYKCS
Trigger: GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTA...AAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS-3UTR CAA 90 bp TTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTATACACACCAAGGATCTaGTTCAAATACAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: FSIDRWTRVMSSHGKFRLYTPRI*FKYKCS
Trigger: GGAACATTTGTATTTGAACAAGATCCTTGGTGTGTA...TAAACGAAACTTTCCATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613060.4
ENST00000618278.4
ENST00000649500.1
CDS GCA 72 bp TCTGCTCGGCTGTGCCGGGTTCCGCCGGCCGGGGGCTaGCTGCCCGCTCGCTCTCTGACCCGCTGGGTGAAC +
Preference number: 6 (lower is better)
Translates to: SARLCRVPPAGG*LPARSLTRWVN
Trigger: GTTCACCCAGCGGGTCAGAGAGCGAGCGGGCAGGCAGCCCCCGGCCGGCGGAACCCGGCACAGCCGAGCAGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000622810.4
ENST00000649500.1
CDS GCA 72 bp CCGCACTCCCTCTTGGCGCAGCTTGTCCTCTGGGCTTaGGGTCCTCGGGGCTCGGCGTTGGCGGCGGCGCGA +
Preference number: 6 (lower is better)
Translates to: PHSLLAQLVLWA*GPRGSALAAAR
Trigger: TCGCGCCGCCGCCAACGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000622810.4
ENST00000649500.1
CDS CAA 72 bp TCCGCACTCCCTCTTGGCGCAGCTTGTCCTCTGGGCTaGCGGTCCTCGGGGCTCGGCGTTGGCGGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: SALPLGAACPLG*RSSGLGVGGGA
Trigger: CGCGCCGCCGCCAACGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000622810.4
ENST00000649500.1
CDS CAA 90 bp CCCGCTCGCTCTCTGACCCGCTGGGTGAACGCTCCGCACTCCCTCTaGGCGCAGCTTGTCCTCTGGGCTTGCGGTCCTCGGGGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: PARSLTRWVNAPHSL*AQLVLWACGPRGSA
Trigger: CGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGCGTTCACCCAGCGGGTCAGAGAGCGAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000622810.4
ENST00000649500.1
CDS CCA 72 bp AACGCTCCGCACTCCCTCTTGGCGCAGCTTGTCCTCTaGGCTTGCGGTCCTCGGGGCTCGGCGTTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: NAPHSLLAQLVL*ACGPRGSALAA
Trigger: CGCCGCCAACGCCGAGCCCCGAGGACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGCGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000622810.4
ENST00000649500.1
CDS CCA 72 bp CTGGTCCCAGCCTCCAGCTCTAAGGCGGCTTTGTACTaGATGGGCTCCCCTGTGGCCCGGCCCAAGCTCACC +
Preference number: 6 (lower is better)
Translates to: LVPASSSKAALY*MGSPVARPKLT
Trigger: GGTGAGCTTGGGCCGGGCCACAGGGGAGCCCATCCAGTACAAAGCCGCCTTAGAGCTGGAGGCTGGGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CAA 72 bp TCTCTGACCCGCTGGGTGAACGCTCCGCACTCCCTCTaGGCGCAGCTTGTCCTCTGGGCTTGCGGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: SLTRWVNAPHSL*AQLVLWACGPR
Trigger: CCGAGGACCGCAAGCCCAGAGGACAAGCTGCGCCAAGAGGGAGTGCGGAGCGTTCACCCAGCGGGTCAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000613930.4
ENST00000615188.1
ENST00000618278.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000622810.4
ENST00000649500.1
CDS CAA 72 bp CACGCTCTGGTCCCAGCCTCCAGCTCTAAGGCGGCTTaGTACTGGATGGGCTCCCCTGTGGCCCGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: HALVPASSSKAA*YWMGSPVARPK
Trigger: CTTGGGCCGGGCCACAGGGGAGCCCATCCAGTACAAAGCCGCCTTAGAGCTGGAGGCTGGGACCAGAGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CCA 72 bp CCATCTCCTTGGTTTGGGAGCTCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGGGGTGGCTGCGGCGCC +
Preference number: 6 (lower is better)
Translates to: PSPWFGSSSEGL*FWFWIWGGCGA
Trigger: GGCGCCGCAGCCACCCCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGAGCTCCCAAACCAAGGAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613060.4
ENST00000618278.4
CDS CCA 72 bp GAGAAACGCACGTTTGGGAGCTCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGGGGTGGCTGCGGCGCC +
Preference number: 6 (lower is better)
Translates to: EKRTFGSSSEGL*FWFWIWGGCGA
Trigger: GGCGCCGCAGCCACCCCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGAGCTCCCAAACGTGCGTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615188.1
CDS CCA 72 bp CTCCTTGCTTTGTTTGGGAGCTCCTCAGAAGGGCTGTaGTTCTGGTTCTGGATCTGGGGTGGCTGCGGCGCC +
Preference number: 6 (lower is better)
Translates to: LLALFGSSSEGL*FWFWIWGGCGA
Trigger: GGCGCCGCAGCCACCCCAGATCCAGAACCAGAACCACAGCCCTTCTGAGGAGCTCCCAAACAAAGCAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610642.4
ENST00000613930.4
ENST00000621751.4
ENST00000622176.4
ENST00000622186.5
ENST00000649500.1
CDS CCA 72 bp GCCTGGCCTTGTCCTGCCTCTTTGGAGGTGGCAAACTaGAGGACCAGAGAGGCTGAGGGACCTGCTCAAGGT +
Preference number: 6 (lower is better)
Translates to: AWPCPASLEVAN*RTREAEGPAQG
Trigger: ACCTTGAGCAGGTCCCTCAGCCTCTCTGGTCCTCCAGTTTGCCACCTCCAAAGAGGCAGGACAAGGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CAA 72 bp CTCAGTCGGGCTTATCCCCTGTCTCTAAGGGTGGGGTaGGCAGGAGCATGGCAGGCTGACCTCATGGAGGTC +
Preference number: 6 (lower is better)
Translates to: LSRAYPLSLRVG*AGAWQADLMEV
Trigger: GACCTCCATGAGGTCAGCCTGCCATGCTCCTGCCAACCCCACCCTTAGAGACAGGGGATAAGCCCGACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CCA 72 bp AGACACAAGCCTGGCCTTGTCCTGCCTCTTTGGAGGTaGCAAACTGGAGGACCAGAGAGGCTGAGGGACCTG +
Preference number: 6 (lower is better)
Translates to: RHKPGLVLPLWR*QTGGPERLRDL
Trigger: CAGGTCCCTCAGCCTCTCTGGTCCTCCAGTTTGCCACCTCCAAAGAGGCAGGACAAGGCCAGGCTTGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CCA 72 bp CTTGGGAGACACAAGCCTGGCCTTGTCCTGCCTCTTTaGAGGTGGCAAACTGGAGGACCAGAGAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LGRHKPGLVLPL*RWQTGGPERLR
Trigger: CCTCAGCCTCTCTGGTCCTCCAGTTTGCCACCTCCAAAGAGGCAGGACAAGGCCAGGCTTGTGTCTCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CAA 72 bp GCTTGGGAGACACAAGCCTGGCCTTGTCCTGCCTCTTaGGAGGTGGCAAACTGGAGGACCAGAGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: AWETQAWPCPAS*EVANWRTREAE
Trigger: CTCAGCCTCTCTGGTCCTCCAGTTTGCCACCTCCAAAGAGGCAGGACAAGGCCAGGCTTGTGTCTCCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS GCA 72 bp GGGCCATCCTCTCTGCCCCACCCATGTCCTCCTCCTTaGTTCAATGAGGTGGCCTTACTCCCAGAACTCGAT +
Preference number: 6 (lower is better)
Translates to: GPSSLPHPCPPP*FNEVALLPELD
Trigger: ATCGAGTTCTGGGAGTAAGGCCACCTCATTGAAGCAAGGAGGAGGACATGGGTGGGGCAGAGAGGATGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621751.4
CDS CAA 72 bp GGCGGACAGATAAGGAGGTGTGTGAATGTCTGGGGCTaGGGAGACACAAGCCTGGCCTTGTCCTGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: GGQIRRCVNVWG*GDTSLALSCLF
Trigger: AAAGAGGCAGGACAAGGCCAGGCTTGTGTCTCCCAAGCCCCAGACATTCACACACCTCCTTATCTGTCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CAA 90 bp GAAGCGGTAATTTATAAGCGGCTTCTTCCTGACCTCGCGTGTCTGTaGTCTGAGCAGGCAGCTCTCAGCATCACCCATCCTGCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: EAVIYKRLLPDLACL*SEQAALSITHPAGW
Trigger: CCACCCAGCAGGATGGGTGATGCTGAGAGCTGCCTGCTCAGACAACAGACACGCGAGGTCAGGAAGAAGCCGCTTATAAATTACCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000618278.4
ENST00000622810.4
CDS CAA 90 bp AGTAGATATGGCGGACAGATAAGGAGGTGTGTGAATGTCTGGGGCTaGGGAGACACAAGCCTGGCCTTGTCCTGCCTCTTTGGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: SRYGGQIRRCVNVWG*GDTSLALSCLFGGG
Trigger: GCCACCTCCAAAGAGGCAGGACAAGGCCAGGCTTGTGTCTCCCAAGCCCCAGACATTCACACACCTCCTTATCTGTCCGCCATATCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CCA 72 bp AGATATGGCGGACAGATAAGGAGGTGTGTGAATGTCTaGGGCTTGGGAGACACAAGCCTGGCCTTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: RYGGQIRRCVNV*GLGDTSLALSC
Trigger: GCAGGACAAGGCCAGGCTTGTGTCTCCCAAGCCCCAGACATTCACACACCTCCTTATCTGTCCGCCATATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613930.4
CDS CAA 72 bp ATTTATAAGCGGCTTCTTCCTGACCTCGCGTGTCTGTaGTCTGAGCAGGCAGCTCTCAGCATCACCCATCCT +
Preference number: 6 (lower is better)
Translates to: IYKRLLPDLACL*SEQAALSITHP
Trigger: AGGATGGGTGATGCTGAGAGCTGCCTGCTCAGACAACAGACACGCGAGGTCAGGAAGAAGCCGCTTATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000610642.4
ENST00000613060.4
ENST00000618278.4
ENST00000622810.4
ENST00000649500.1
CDS CCA 72 bp GTTTTCCATCTACAGCGGGTAACAGAATTTGCTTTCTaGAGTACATTTGGTAAAGTTAGAAAAGCAAACATG +
Preference number: 6 (lower is better)
Translates to: VFHLQRVTEFAF*STFGKVRKANM
Trigger: CATGTTTGCTTTTCTAACTTTACCAAATGTACTCCAGAAAGCAAATTCTGTTACCCGCTGTAGATGGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613930.4