RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000165970

Ensembl transcript IDs: ENST00000298923.11, ENST00000525748.6, ENST00000528440.1

Found 428 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGATCCTCCTCTGCAGGGTAAAACGTGTGGTCAGGGGACCAACCTaGCCAGAAACAGTCACCATGGGCACAGGCAAACAGCGCTTCAGG +
Preference number: 1 (lower is better)
Translates to: LILLCRVKRVVRGPT*PETVTMGTGKQRFR
Trigger: CCTGAAGCGCTGTTTGCCTGTGCCCATGGTGACTGTTTCTGGTCAGGTTGGTCCCCTGACCACACGTTTTACCCTGCAGAGGAGGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CCA 90 bp CACACCACTGGACTAGCACTGAGTGCCCAGTTCCAAATCCTTCACTaGCAGTTTGAGTCCCAAGGAAGAGGTTCCCAAGGGGTCGATCAT +
Preference number: 1 (lower is better)
Translates to: HTTGLALSAQFQILH*QFESQGRGSQGVDH
Trigger: ATGATCGACCCCTTGGGAACCTCTTCCTTGGGACTCAAACTGCCAGTGAAGGATTTGGAACTGGGCACTCAGTGCTAGTCCAGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CCA 90 bp TGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTaGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: WLLSLYQVSAGEAHF*YHCATSAAVIGGFS
Trigger: TGAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR TCA 90 bp TGGACTAGCACTGAGTGCCCAGTTCCAAATCCTTCACTGGCAGTTTaGGTCCCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGT +
Preference number: 1 (lower is better)
Translates to: WTSTECPVPNPSLAV*VPRKRFPRGRSCSC
Trigger: ACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGGGACTCAAACTGCCAGTGAAGGATTTGGAACTGGGCACTCAGTGCTAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR GCA 90 bp AAATGCTCCTCTGTTGGCCTTGGCCTTTTGGTCCTGCAAAACACCTaGCACACAGCACGTCCTCTCTTGAATCATCTGCCTCAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: KCSSVGLGLLVLQNT*HTARPLLNHLPQRS
Trigger: GCTTCTTTGAGGCAGATGATTCAAGAGAGGACGTGCTGTGTGGCAGGTGTTTTGCAGGACCAAAAGGCCAAGGCCAACAGAGGAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CCA 90 bp CCTAAGTTATTCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTaGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGT +
Preference number: 1 (lower is better)
Translates to: PKLFLLAPLTLPGIS*RGSFLVPLCDVCCS
Trigger: ACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGAATAACTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR GCA 90 bp ACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGTACCATTGTaGGACGTCTGCTGCAGTAATTGGGGGCTTCTCATCAATATGGCT +
Preference number: 1 (lower is better)
Translates to: TLPGISWRGSFLVPL*DVCCSNWGLLINMA
Trigger: AGCCATATTGATGAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CCA 90 bp GGAAAGATAGGAAGCTTCACTTTCACAAATCCTAGGGCCACTTTGTaGGGAAATGAGTATCAAGGCAGAATCACCCACACCTTTGCTCCC +
Preference number: 1 (lower is better)
Translates to: GKIGSFTFTNPRATL*GNEYQGRITHTFAP
Trigger: GGGAGCAAAGGTGTGGGTGATTCTGCCTTGATACTCATTTCCCCACAAAGTGGCCCTAGGATTTGTGAAAGTGAAGCTTCCTATCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR TCA 90 bp TCTGAAAACACTTTCTCTTTGGCTGCAGGCTGCTCAGAGGTGACCTaGGCAAAGACCACATTTCAAAACTACTTGGCCTTTCTGGGCAAT +
Preference number: 1 (lower is better)
Translates to: SENTFSLAAGCSEVT*AKTTFQNYLAFLGN
Trigger: ATTGCCCAGAAAGGCCAAGTAGTTTTGAAATGTGGTCTTTGCTCAGGTCACCTCTGAGCAGCCTGCAGCCAAAGAGAAAGTGTTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR GCA 90 bp AAAGTTTGGTTTTATCTTTGCATTCTGGCGTATTCCAAGGGTTGTTaGAGGAGCCCCAGGGTAGTACAGACACAAAGGAGGCAAACAGGT +
Preference number: 1 (lower is better)
Translates to: KVWFYLCILAYSKGC*RSPRVVQTQRRQTG
Trigger: ACCTGTTTGCCTCCTTTGTGTCTGTACTACCCTGGGGCTCCTGCAACAACCCTTGGAATACGCCAGAATGCAAAGATAAAACCAAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR GCA 90 bp ATCAGCTGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTaGAGTAATTGGGGGCTTCTCATCAATATGGCTTTCTTAGAGAAA +
Preference number: 1 (lower is better)
Translates to: ISWRGSFLVPLCDVC*SNWGLLINMAFLEK
Trigger: TTTCTCTAAGAAAGCCATATTGATGAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR GCA 90 bp GAGCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATaGATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAG +
Preference number: 1 (lower is better)
Translates to: EHTNFSLSINLPGAR*IFITNIIGIQMTEQ
Trigger: CTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CCA 90 bp AGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTaGGGGCTTCTCATCAATATGGCTTTCTTAGAGAAATCTGTGTTC +
Preference number: 1 (lower is better)
Translates to: RGSFLVPLCDVCCSN*GLLINMAFLEKSVF
Trigger: GAACACAGATTTCTCTAAGAAAGCCATATTGATGAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR TCA 90 bp TATCATGTAGAAATGAGCATGGAGCTCTACTATGAACGTACAAAATaGGGCACAACTTATATGATGGCTTCTTGGGCAGAGGTGGAGGAA +
Preference number: 1 (lower is better)
Translates to: YHVEMSMELYYERTK*GTTYMMASWAEVEE
Trigger: TTCCTCCACCTCTGCCCAAGAAGCCATCATATAAGTTGTGCCTCATTTTGTACGTTCATAGTAGAGCTCCATGCTCATTTCTACATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR GCA 90 bp TTGAATCATCTGCCTCAAAGAAGCATGTCCCAACTCAAATCCAGGTaGAACAACAGTAGTATGATCTTGCCATCTCATCTTACATTGAGC +
Preference number: 1 (lower is better)
Translates to: LNHLPQRSMSQLKSR*NNSSMILPSHLTLS
Trigger: GCTCAATGTAAGATGAGATGGCAAGATCATACTACTGTTGTTGCACCTGGATTTGAGTTGGGACATGCTTCTTTGAGGCAGATGATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR TCA 90 bp AAACTGACAGTTCAATCAAAGTCACAATGTGTAGACTGTAGCATCTaGGTTAGTGGTAACTGGAGATTGCTGATCCAAACGAAGGAAACA +
Preference number: 1 (lower is better)
Translates to: KLTVQSKSQCVDCSI*VSGNWRLLIQTKET
Trigger: TGTTTCCTTCGTTTGGATCAGCAATCTCCAGTTACCACTAACTCAGATGCTACAGTCTACACATTGTGACTTTGATTGAACTGTCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR TCA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTTGTAAGAAGAGAGAGTaGTCAGGCCTCCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGCKKRE*SGLPMQ
Trigger: CTGCATGGGGAGGCCTGATCACTCTCTCTTCTTACA...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATACACTGTTGGTGCAGGTaGCAATTAGAGTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIHCWCR*QLECPC
Trigger: ACAGGGACACTCTAATTGTCACCTGCACCAACAGTG...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATAGCATCAGGAAAAAGATaGTGGCCCAGAACGGAGAGA +
Preference number: 2 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIASGKR*WPRTER
Trigger: TCTCTCCGTTCTGGGCCATCATCTTTTTCCTGATGC...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTCTTGGGAAACTCGTCTaGGATGGAGGTCACTATGGT +
Preference number: 2 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGLGKLV*DGGHYG
Trigger: ACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAG...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR GCA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATATATTCCAAGGGTTGTTaGAGGAGCCCCAGGGTAGTA +
Preference number: 2 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIYSKGC*RSPRVV
Trigger: TACTACCCTGGGGCTCCTGCAACAACCCTTGGAATA...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp TCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTGGCAAACATAGTGTCAAGTCCCTGGCTGGCAAACTaGCCCAGCGACACCTCCAAG +
Preference number: 2 (lower is better)
Translates to: SSEMEVTMVSMVANIVSSPWLAN*PSDTSK
Trigger: CTTGGAGGTGTCGCTGGGCCAGTTTGCCAGCCAGGG...ACTTGACACTATGTTTGCCACCATCGAGACCATAGTGACCTCCATCTCAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CAA 90 bp CTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTaGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: LAPLTLPGISWRGSF*VPLCDVCCSNWGLL
Trigger: GAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR GCA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTACACTGGCTTGTGTGTaGGTAGGTACTTGGGAAACT +
Preference number: 2 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGTLACV*VGTWET
Trigger: AGTTTCCCAAGTACCTACGCACACACAAGCCAGTGT...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGACACTGGTCCCTGGCTaGCAAACTGGCCCAGCGACA +
Preference number: 2 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLTLVPG*QTGPAT
Trigger: TGTCGCTGGGCCAGTTTGCCAGCCAGGGACCAGTGT...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGACAGACACTGGTCCCTaGCTGGCAAACTGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLTDTGP*LANWPS
Trigger: GCTGGGCCAGTTTGCCAGCCAGGGACCAGTGTCTGT...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CAA 90 bp ATGCAGCAGCCCAGAGTAAACACTGGCTTGTGTGTGCGTAGGTACTaGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTG +
Preference number: 2 (lower is better)
Translates to: MQQPRVNTGLCVRRY*GNSSEMEVTMVSMV
Trigger: CACCATCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACACACAAGCCAGTGTTTACTCTGGGCTGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGACACCGTGGCATCCGTaGGTTTCTCCCACTTGGGTG +
Preference number: 2 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLTPWHP*VSPTWV
Trigger: CACCCAAGTGGGAGAAACTCACGGATGCCACGGTGT...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATACCACATTCTCAATGTTaGCTTTGCGTTCATTGGCCA +
Preference number: 2 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIPHSQC*LCVHWP
Trigger: TGGCCAATGAACGCAAAGTCAACATTGAGAATGTGG...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR GCA 90 bp GTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGACGGGTAAACCACAAATaGAATGCCTGGCCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: VCVGTWETRLRWRSLWSRRVNHK*NAWPLV
Trigger: GACCAAGGGCCAGGCATTGCATTTGTGGTTTACCCG...TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR GCA 90 bp TCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTGGCAAACATAGTGTCAAGTCGAAGCCGGCAAAGATaGTTGTGGCACTGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: SSEMEVTMVSMVANIVSSRSRQR*LWHCWC
Trigger: GCACCAACAGTGCCACAAGCATCTTTGCCGGCTTCG...ACTTGACACTATGTTTGCCACCATCGAGACCATAGTGACCTCCATCTCAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGCTTCCACACAGACACTaGTCCCTGGCTGGCAAACTG +
Preference number: 2 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLLPHRH*SLAGKL
Trigger: CAGTTTGCCAGCCAGGGACCAGTGTCTGTGTGGAAG...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CAA 90 bp CCCATGATGAAGAAACAAATGCAGCAGCCCAGAGTAAACACTGGCTaGTGTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTC +
Preference number: 2 (lower is better)
Translates to: PMMKKQMQQPRVNTG*CVRRYLGNSSEMEV
Trigger: GACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACACACAAGCCAGTGTTTACTCTGGGCTGCTGCATTTGTTTCTTCATCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGGTACACCACTTTTCCTaGAGTCTTGATTCCTTTAGC +
Preference number: 2 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVEVHHFS*SLDSFS
Trigger: GCTAAAGGAATCAAGACTTCAGGAAAAGTGGTGTAC...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGGTCAGGGGACCAACCTaGCCAGAAACAGTCACCATG +
Preference number: 2 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQVRGPT*PETVTM
Trigger: CATGGTGACTGTTTCTGGTCAGGTTGGTCCCCTGAC...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR TCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCTTCATGGCAGACAGGTaGGGCCACAGCTCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: TKAIISRNWVGVQHQTATFMADR*GHSSAS
Trigger: GGAAGCTGAGCTGTGGCCTCACCTGTCTGCCATGAA...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR GCA 90 bp TCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTGGCAAACATAGTGTCAAGTGCCTGGCCCTTGGTCTaGCACATTCTCAATGTTGAC +
Preference number: 2 (lower is better)
Translates to: SSEMEVTMVSMVANIVSSAWPLV*HILNVD
Trigger: GTCAACATTGAGAATGTGGCAGACCAAGGGCCAGGC...ACTTGACACTATGTTTGCCACCATCGAGACCATAGTGACCTCCATCTCAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR GCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAATTGTGCGACGTCTGCTaGAGTAATTGGGGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: SYCASLWEEDNDLQPREQLCDVC*SNWGLL
Trigger: GAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAA...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR GCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAACCATTGTGCGACGTCTaGTGCAGTAATTGGGGGCTT +
Preference number: 2 (lower is better)
Translates to: SYCASLWEEDNDLQPREQPLCDV*CSNWGL
Trigger: AAGCCCCCAATTACTGCAGCAGACGTCGCACAATGG...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 90 bp CTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGTACCATaGTGCGACGTCTGCTGCAGTAATTGGGGGCTTCTCATCAATATG +
Preference number: 2 (lower is better)
Translates to: LTLPGISWRGSFLVP*CDVCCSNWGLLINM
Trigger: CATATTGATGAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR GCA 90 bp TCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTGGCAAACATAGTGTCAAGTAAACCACAAATGCAATaGCTGGCCCTTGGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SSEMEVTMVSMVANIVSSKPQMQ*LALGLP
Trigger: TGGCAGACCAAGGGCCAGGCATTGCATTTGTGGTTT...ACTTGACACTATGTTTGCCACCATCGAGACCATAGTGACCTCCATCTCAGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATAAATGTCTTATTGGCCTaGCTGGTGAAATTAACCATT +
Preference number: 2 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSINVLLA*LVKLTI
Trigger: AATGGTTAATTTCACCAGCCAGGCCAATAAGACATT...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAAGAGAGAGAGGCAGCCTaGTTAAGGCTTCCGGGTAAA +
Preference number: 2 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKEREAA*LRLPGK
Trigger: TTTACCCGGAAGCCTTAACCAGGCTGCCTCTCTCTC...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAAAACAGGATCAAGTCTaGACCATCCCACACCACTGG +
Preference number: 2 (lower is better)
Translates to: SYCASLWEEDNDLQPREQKQDQV*TIPHHW
Trigger: CCAGTGGTGTGGGATGGTCCAGACTTGATCCTGTTT...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR TCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAAATGATGCATACACAATaGCCCAAGCCAGGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKMMHTQ*PKPGRG
Trigger: GCCTCTTCCTGGCTTGGGTCATTGTGTATGCATCAT...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGAGATGGAGGTCACTATaGTCTCGATGGTGGCAAACA +
Preference number: 2 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLRWRSL*SRWWQT
Trigger: TGTTTGCCACCATCGAGACCATAGTGACCTCCATCT...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGTATCACAAACATAATTaGGATCCAGATGACGGAACA +
Preference number: 2 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVEYHKHN*DPDDGT
Trigger: TGTTCCGTCATCTGGATCCCAATTATGTTTGTGATA...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGAGCTATAGTCTTAATTaGCTCACTCGCTACTTACCT +
Preference number: 2 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWSYSLN*LTRYLP
Trigger: AGGTAAGTAGCGAGTGAGCCAATTAAGACTATAGCT...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 90 bp CTGGGAAAGATAGGAAGCTTCACTTTCACAAATCCTAGGGCCACTTaGTGGGGAAATGAGTATCAAGGCAGAATCACCCACACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: LGKIGSFTFTNPRAT*WGNEYQGRITHTFA
Trigger: AGCAAAGGTGTGGGTGATTCTGCCTTGATACTCATTTCCCCACAAAGTGGCCCTAGGATTTGTGAAAGTGAAGCTTCCTATCTTTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR GCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGTATGTAGCTCTTTACTaGAGCATGCGACACTATGCC +
Preference number: 2 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQYVALY*SMRHYA
Trigger: GGCATAGTGTCGCATGCTGCAGTAAAGAGCTACATA...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR GCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAACTCACAAGTGGAAAATaGTCCACCATTCTACACAGT +
Preference number: 2 (lower is better)
Translates to: SYCASLWEEDNDLQPREQLTSGK*STILHS
Trigger: ACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAG...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCATGGGAGGAGAGCTATaGAAAACATTAGGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: TKAIISRNWVGVQHQTATMGGEL*KTLGGG
Trigger: GCCTCCTCCTAATGTTTTCCATAGCTCTCCTCCCAT...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAATCAGACTGCAACCATTaGCTCAATCAGAGTTTTAGC +
Preference number: 2 (lower is better)
Translates to: SYCASLWEEDNDLQPREQSDCNH*LNQSFS
Trigger: GCTAAAACTCTGATTGAGCCAATGGTTGCAGTCTGA...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 90 bp TCCAGGTGCAACAACAGTAGTATGATCTTGCCATCTCATCTTACATaGAGCAACAGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGAC +
Preference number: 2 (lower is better)
Translates to: SRCNNSSMILPSHLT*SNSYCASLWEEDND
Trigger: GTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACTGTTGCTCAATGTAAGATGAGATGGCAAGATCATACTACTGTTGTTGCACCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR TCA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACAACGGGAACGTGGCCGTaGAGTACACCACTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETTGTWP*STPLFL
Trigger: CAGGAAAAGTGGTGTACTTCACGGCCACGTTCCCGT...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAACATTGAGGTCATCATaGTTTTGCATTGACCACAGA +
Preference number: 2 (lower is better)
Translates to: SYCASLWEEDNDLQPREQTLRSS*FCIDHR
Trigger: TCTGTGGTCAATGCAAAATCATGATGACCTCAATGT...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR GCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTCTTTACTGCAGCATaGGACACTATGCCTACTTTT +
Preference number: 2 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQLFTAA*DTMPTF
Trigger: AAAAGTAGGCATAGTGTCGCATGCTGCAGTAAAGAG...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCAGAAACAGTCACCATaGGCACAGGCAAACAGCGCT +
Preference number: 2 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFQKQSP*AQANSA
Trigger: AGCGCTGTTTGCCTGTGCCCATGGTGACTGTTTCTG...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAATCCCCAGTGGTGACTaGAAATATAAACTTAACCAC +
Preference number: 2 (lower is better)
Translates to: SYCASLWEEDNDLQPREQIPSGD*KYKLNH
Trigger: GTGGTTAAGTTTATATTTCCAGTCACCACTGGGGAT...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR TCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATTCAGCACAAAGTACTTaGAGTACTCTTCACTTCCAC +
Preference number: 2 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYSAQST*STLHFH
Trigger: GTGGAAGTGAAGAGTACTTCAAGTACTTTGTGCTGA...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACAGAGCTAGTGGCCACCTaGTCTCGCCAGGATATTCAA +
Preference number: 2 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETELVAT*SRQDIQ
Trigger: TTGAATATCCTGGCGAGATCAGGTGGCCACTAGCTC...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCCAGTGGTGTCCAAATTaGATGGTCTTGTCTTACATC +
Preference number: 2 (lower is better)
Translates to: TKAIISRNWVGVQHQTATQWCPN*MVLSYI
Trigger: GATGTAAGACAAGACCATTCAATTTGGACACCACTG...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACACTTGTAGAGCTGGGATaGCCTTCCACACAGACACTG +
Preference number: 2 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETLVELG*PSTQTL
Trigger: CAGTGTCTGTGTGGAAGGCCATCCCAGCTCTACAAG...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AGATGCATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAGGCGAGCGATTCCTTTAGCCAATaGTGCATACACAATGACCCA +
Preference number: 2 (lower is better)
Translates to: RCIFITNIIGIQMTEQASDSFSQ*CIHNDP
Trigger: TGGGTCATTGTGTATGCATCATTGGCTAAAGGAATC...GCTCGCCTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGCATGGAGCTCTACTATaGACGTACAAAATGAGGCAC +
Preference number: 2 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKHGALL*TYKMRH
Trigger: GTGCCTCATTTTGTACGTTCATAGTAGAGCTCCATG...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCAAAGAGCCATAGGTCATaGGCTCCCACTGGTAAAAGC +
Preference number: 2 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPKSHRS*APTGKS
Trigger: GCTTTTACCAGTGGGAGCCCATGACCTATGGCTCTT...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR GCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATGTTTGGTTTTATCTTTaGATTCTGGCGTATTCCAAG +
Preference number: 2 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYVWFYL*ILAYSK
Trigger: CTTGGAATACGCCAGAATGCAAAGATAAAACCAAAC...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR GCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGACAAGATCACCACATTaGTCAGTTCTGTTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKTRSPH*SVLFKS
Trigger: GGACTTGAACAGAACTGAGCAATGTGGTGATCTTGT...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACAGAAACTCGTCTGAGATaGAGGTCACTATGGTCTCGA +
Preference number: 2 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETETRLR*RSLWSR
Trigger: TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTC...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCAACTCTTCACTTCCACTaGCAAATGTCTTATTGGCCT +
Preference number: 2 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPTLHFH*QMSYWP
Trigger: AGGCCAATAAGACATTTGTCAGTGGAAGTGAAGAGT...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR TCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAATGGATACCTCTCTATTaGCAAAACCACGCATACCTA +
Preference number: 2 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKWIPLY*QNHAYL
Trigger: TAGGTATGCGTGGTTTTGTCAATAGAGAGGTATCCA...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR TCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTGAGGGAAGAAAACTaGCAGTTCAATCAAAGTCAC +
Preference number: 2 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHLREEN*QFNQSH
Trigger: GTGACTTTGATTGAACTGTCAGTTTTCTTCCCTCAA...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAAATAATTAGCAGAAATTaGGTTGGCGTCCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKIISRN*VGVQHQ
Trigger: CTGATGCTGGACGCCAACCCAATTTCTGCTAATTAT...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR TCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCAAGAAAGTCGAGTTCTTaGTCTGTATTTTGGGATGGT +
Preference number: 2 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPRKSSS*SVFWDG
Trigger: ACCATCCCAAAATACAGATCAAGAACTCGACTTTCT...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR GCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTACAGCATGCGACACTATaGCTACTTTTCTACATAATC +
Preference number: 2 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLQHATL*LLFYII
Trigger: GATTATGTAGAAAAGTAGGCATAGTGTCGCATGCTG...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCAACCCTGAGTGATCATTaGAAAACCCATGATGAAGAA +
Preference number: 2 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPTLSDH*KTHDEE
Trigger: TTCTTCATCATGGGTTTTCCAATGATCACTCAGGGT...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATGGTGTCCAAATTGAATaGTCTTGTCTTACATCCAAA +
Preference number: 2 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHGVQIE*SCLTSK
Trigger: TTTGGATGTAAGACAAGACCATTCAATTTGGACACC...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCAATCTGTATTTTGGGATaGTCACTGATAACACAGGAA +
Preference number: 2 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPICILG*SLITQE
Trigger: TTCCTGTGTTATCAGTGACCATCCCAAAATACAGAT...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CCA 72 bp TCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATaGCCTTCCACACAGACACTGGTCCCTGGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: SASRCHSLVELG*PSTQTLVPGWQ
Trigger: TTGCCAGCCAGGGACCAGTGTCTGTGTGGAAGGCCATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTAGCCGGCAAAGATGCTaGTGGCACTGTTGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGSRQRC*WHCWCR
Trigger: CCTGCACCAACAGTGCCACAAGCATCTTTGCCGGCT...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR TCA 72 bp CTCTGCAGGGTAAAACGTGTGGTCAGGGGACCAACCTaGCCAGAAACAGTCACCATGGGCACAGGCAAACAG +
Preference number: 3 (lower is better)
Translates to: LCRVKRVVRGPT*PETVTMGTGKQ
Trigger: CTGTTTGCCTGTGCCCATGGTGACTGTTTCTGGTCAGGTTGGTCCCCTGACCACACGTTTTACCCTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CCA 72 bp GGACTAGCACTGAGTGCCCAGTTCCAAATCCTTCACTaGCAGTTTGAGTCCCAAGGAAGAGGTTCCCAAGGG +
Preference number: 3 (lower is better)
Translates to: GLALSAQFQILH*QFESQGRGSQG
Trigger: CCCTTGGGAACCTCTTCCTTGGGACTCAAACTGCCAGTGAAGGATTTGGAACTGGGCACTCAGTGCTAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTTTGACTTTGCGTTCATaGGCCATGAAGCCGATAACG +
Preference number: 3 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGLTLRS*AMKPIT
Trigger: CGTTATCGGCTTCATGGCCAATGAACGCAAAGTCAA...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATAGCCACATTCTCAATGTaGACTTTGCGTTCATTGGCC +
Preference number: 3 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIATFSM*TLRSLA
Trigger: GGCCAATGAACGCAAAGTCAACATTGAGAATGTGGC...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR TCA 72 bp ACTGAGTGCCCAGTTCCAAATCCTTCACTGGCAGTTTaGGTCCCAAGGAAGAGGTTCCCAAGGGGTCGATCA +
Preference number: 3 (lower is better)
Translates to: TECPVPNPSLAV*VPRKRFPRGRS
Trigger: TGATCGACCCCTTGGGAACCTCTTCCTTGGGACTCAAACTGCCAGTGAAGGATTTGGAACTGGGCACTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CCA 72 bp TTCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTaGAGAGGCTCATTTTTGGTACCATTGTGCGACGTC +
Preference number: 3 (lower is better)
Translates to: FLLAPLTLPGIS*RGSFLVPLCDV
Trigger: GACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp TCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTGGCAAACATAGTGTCAAGTGTATTCCAAGGGTTGTaGCAGGAGCCCCAGGGTAGT +
Preference number: 3 (lower is better)
Translates to: SSEMEVTMVSMVANIVSSVFQGL*QEPQGS
Trigger: ACTACCCTGGGGCTCCTGCAACAACCCTTGGAATAC...ACTTGACACTATGTTTGCCACCATCGAGACCATAGTGACCTCCATCTCAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATGGCGTATTCCAAGGGTaGTTGCAGGAGCCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYGVFQG*LQEPQG
Trigger: ACCCTGGGGCTCCTGCAACAACCCTTGGAATACGCC...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR TCA 72 bp AGCCGGCAAAGATGCTTGTGGCACTGTTGGTGCAGGTaGCAATTAGAGTGTCCCTGTAGCAGTTGTTGTGGA +
Preference number: 3 (lower is better)
Translates to: SRQRCLWHCWCR*QLECPCSSCCG
Trigger: TCCACAACAACTGCTACAGGGACACTCTAATTGTCACCTGCACCAACAGTGCCACAAGCATCTTTGCCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGTTATATGATGGCTTCTaGGGCAGAGGTGGAGGAAAT +
Preference number: 3 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWLYDGF*GRGGGN
Trigger: ATTTCCTCCACCTCTGCCCAAGAAGCCATCATATAA...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CCA 72 bp TCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTaGTACCATTGTGCGACGTCTGCTGCAGTAATTGGG +
Preference number: 3 (lower is better)
Translates to: SLYQVSAGEAHF*YHCATSAAVIG
Trigger: CCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR GCA 72 bp TTTTATCTTTGCATTCTGGCGTATTCCAAGGGTTGTTaGAGGAGCCCCAGGGTAGTACAGACACAAAGGAGG +
Preference number: 3 (lower is better)
Translates to: FYLCILAYSKGC*RSPRVVQTQRR
Trigger: CCTCCTTTGTGTCTGTACTACCCTGGGGCTCCTGCAACAACCCTTGGAATACGCCAGAATGCAAAGATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CCA 72 bp GGAAGCTTCACTTTCACAAATCCTAGGGCCACTTTGTaGGGAAATGAGTATCAAGGCAGAATCACCCACACC +
Preference number: 3 (lower is better)
Translates to: GSFTFTNPRATL*GNEYQGRITHT
Trigger: GGTGTGGGTGATTCTGCCTTGATACTCATTTCCCCACAAAGTGGCCCTAGGATTTGTGAAAGTGAAGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGACTTTTCCTGAAGTCTaGATTCCTTTAGCCAATGAT +
Preference number: 3 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVETFPEV*IPLAND
Trigger: ATCATTGGCTAAAGGAATCAAGACTTCAGGAAAAGT...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAAGTGAGTTTCTCCCACTaGGGTGTGATGAAGTACCAG +
Preference number: 3 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKVSFSH*GVMKYQ
Trigger: CTGGTACTTCATCACACCCAAGTGGGAGAAACTCAC...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp TTCCACACCGTGGCATCCGTGAGTTTCTCCCACTTGGGTGTGATGAAGTACCAGAGTTTGGTTTTATCTTaGCATTCTGGCGTATTCCAA +
Preference number: 3 (lower is better)
Translates to: FHTVASVSFSHLGVMKYQSLVLS*HSGVFQ
Trigger: TTGGAATACGCCAGAATGCAAAGATAAAACCAAACT...CTGGTACTTCATCACACCCAAGTGGGAGAAACTCACGGATGCCACGGTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAAATGCTTGTGGCACTGTaGGTGCAGGTGACAATTAGA +
Preference number: 3 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKMLVAL*VQVTIR
Trigger: TCTAATTGTCACCTGCACCAACAGTGCCACAAGCAT...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCTGGAGAGGCTCATTTTaGGTACCATTGTGCGACGTC +
Preference number: 3 (lower is better)
Translates to: TKAIISRNWVGVQHQTATWRGSF*VPLCDV
Trigger: GACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR TCA 72 bp ACTGTAGCATCTGAGTTAGTGGTAACTGGAGATTGCTaGTCCAAACGAAGGAAACAGATCCCCAGTGGTGAC +
Preference number: 3 (lower is better)
Translates to: TVASELVVTGDC*SKRRKQIPSGD
Trigger: GTCACCACTGGGGATCTGTTTCCTTCGTTTGGATCAGCAATCTCCAGTTACCACTAACTCAGATGCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR GCA 72 bp AGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTaGAGTAATTGGGGGCTTCTCATCAATATGGCTTTC +
Preference number: 3 (lower is better)
Translates to: RGSFLVPLCDVC*SNWGLLINMAF
Trigger: GAAAGCCATATTGATGAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp AGATGCATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAGGCGAGCAGAGTAAACACTGGCTaGTGTGTGCGTAGGTACTTG +
Preference number: 3 (lower is better)
Translates to: RCIFITNIIGIQMTEQASRVNTG*CVRRYL
Trigger: CAAGTACCTACGCACACACAAGCCAGTGTTTACTCT...GCTCGCCTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAAACTGGAAGTTCATATaGATGTTGGCAAATGGCGAT +
Preference number: 3 (lower is better)
Translates to: SYCASLWEEDNDLQPREQNWKFI*MLANGD
Trigger: ATCGCCATTTGCCAACATCAATATGAACTTCCAGTT...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR TCA 72 bp AAAGAAAATCTTACTTTTAGGCATGGGAAACCATGCTaGGAGCAAAGGTGGACAGGAAGCACTGAGAGACAC +
Preference number: 3 (lower is better)
Translates to: KENLTFRHGKPC*EQRWTGSTERH
Trigger: GTGTCTCTCAGTGCTTCCTGTCCACCTTTGCTCTCAGCATGGTTTCCCATGCCTAAAAGTAAGATTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR GCA 72 bp CTGCCTCAAAGAAGCATGTCCCAACTCAAATCCAGGTaGAACAACAGTAGTATGATCTTGCCATCTCATCTT +
Preference number: 3 (lower is better)
Translates to: LPQRSMSQLKSR*NNSSMILPSHL
Trigger: AAGATGAGATGGCAAGATCATACTACTGTTGTTGCACCTGGATTTGAGTTGGGACATGCTTCTTTGAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCCACAGGATCGTGACATaGAACCATGGTGCTAAATAT +
Preference number: 3 (lower is better)
Translates to: TKAIISRNWVGVQHQTATHRIVT*NHGAKY
Trigger: ATATTTAGCACCATGGTTCAATGTCACGATCCTGTG...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAATGTTGTTGGGTTTCATaGCTGTTAAACAGGATGAAA +
Preference number: 3 (lower is better)
Translates to: SYCASLWEEDNDLQPREQCCWVS*LLNRMK
Trigger: TTTCATCCTGTTTAACAGCAATGAAACCCAACAACA...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAAAGTTCATATTGATGTaGGCAAATGGCGATGATACT +
Preference number: 3 (lower is better)
Translates to: SYCASLWEEDNDLQPREQKFILM*ANGDDT
Trigger: AGTATCATCGCCATTTGCCAACATCAATATGAACTT...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CCA 72 bp TTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTaGGGGCTTCTCATCAATATGGCTTTCTTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: FLVPLCDVCCSN*GLLINMAFLEK
Trigger: TTTCTCTAAGAAAGCCATATTGATGAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATTTCAGCACAAAGTACTaGAAGTACTCTTCACTTCCA +
Preference number: 3 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYFSTKY*KYSSLP
Trigger: TGGAAGTGAAGAGTACTTCAAGTACTTTGTGCTGAA...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACATGTGTGCGTAGGTACTaGGGAAACTCGTCTGAGATG +
Preference number: 3 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETCVRRY*GNSSEM
Trigger: CATCTCAGACGAGTTTCCCAAGTACCTACGCACACA...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CCA 72 bp CTTCTTTTAATCACAAAAGCAATAATTAGCAGAAATTaGGTTGGCGTCCAGCATCAGACTGCAACCATTGGC +
Preference number: 3 (lower is better)
Translates to: LLLITKAIISRN*VGVQHQTATIG
Trigger: GCCAATGGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGTGATTAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATAGTGGTAACTGGAGATaGCTGATCCAAACGAAGGAA +
Preference number: 3 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHSGNWR*LIQTKE
Trigger: TTCCTTCGTTTGGATCAGCAATCTCCAGTTACCACT...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR-3UTR CAA 90 bp AGATGCATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAGGCGAGCATCTTCACAGAATCTTaGCAAGCCATACACATAAGA +
Preference number: 3 (lower is better)
Translates to: RCIFITNIIGIQMTEQASIFTES*QAIHIR
Trigger: TCTTATGTGTATGGCTTGCAAAGATTCTGTGAAGAT...GCTCGCCTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATAACAAGATCACCACATaGCTCAGTTCTGTTCAAGTC +
Preference number: 3 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHNKITT*LSSVQV
Trigger: GACTTGAACAGAACTGAGCAATGTGGTGATCTTGTT...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR GCA 72 bp AACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATaGATTTTTATCACAAACATAATTGGGATCCAGATG +
Preference number: 3 (lower is better)
Translates to: NFSLSINLPGAR*IFITNIIGIQM
Trigger: CATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR-3UTR CAA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACACTGACAAATGTCTTATaGGCCTGGCTGGTGAAATTA +
Preference number: 3 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETLTNVL*AWLVKL
Trigger: TAATTTCACCAGCCAGGCCAATAAGACATTTGTCAG...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CCA 72 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATaGTCTTGTCTTACATCCAAAACATTTTCTGACCAC +
Preference number: 3 (lower is better)
Translates to: YKLNHLSGVQIE*SCLTSKTFSDH
Trigger: GTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR TCA 72 bp AACACATTGCAAATTTCAAAGACATTGAGGTCATCATaGTTTTGCATTGACCACAGACCTCATGCAATACAT +
Preference number: 3 (lower is better)
Translates to: NTLQISKTLRSS*FCIDHRPHAIH
Trigger: ATGTATTGCATGAGGTCTGTGGTCAATGCAAAATCATGATGACCTCAATGTCTTTGAAATTTGCAATGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CCA 72 bp ATGCAGAAAGTCGAGTTCTTGATCTGTATTTTGGGATaGTCACTGATAACACAGGAATCTAATAAAAGTTTG +
Preference number: 3 (lower is better)
Translates to: MQKVEFLICILG*SLITQESNKSL
Trigger: CAAACTTTTATTAGATTCCTGTGTTATCAGTGACCATCCCAAAATACAGATCAAGAACTCGACTTTCTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CCA 72 bp TTGGCTAAATGTAGTCTTAAAAGCTATAGTCTTAATTaGCTCACTCGCTACTTACCTAAGCTGTATTTATCA +
Preference number: 3 (lower is better)
Translates to: LAKCSLKSYSLN*LTRYLPKLYLS
Trigger: TGATAAATACAGCTTAGGTAAGTAGCGAGTGAGCCAATTAAGACTATAGCTTTTAAGACTACATTTAGCCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATAGCCGCGGGAAGCTCCTaGTCCGGGCTCGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIAAGSS*SGLVLG
Trigger: TCCCAGGACGAGCCCGGAGCAGGAGCTTCCCGCGGC...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATACCGGGAGCACGGACGTaGTTCCATCCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIPGART*FHPWPA
Trigger: TGCTGGCCACGGATGGAATCACGTCCGTGCTCCCGG...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATACGCTCCCCGCGGTGTTaGGCTAAGAATGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIRSPRC*AKNGPQ
Trigger: CTGGGGCCCATTCTTAGCTCAACACCGCGGGGAGCG...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGCGGTGGAAGCGGACCTaGGCACACGTGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMRWKRT*AHVAAA
Trigger: CGCCGCCGCCACGTGTGCCCAGGTCCGCTTCCACCG...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTCGCGCGTCCGCTGACTaGAAAGTTTGGGCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGRASAD*KVWAPV
Trigger: CACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCG...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGGCCGCGGGAAGCTCCTaGTCCGGGCTCGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGAAGSS*SGLVLG
Trigger: TCCCAGGACGAGCCCGGAGCAGGAGCTTCCCGCGGC...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGGCTCCGGGCTCGTCCTaGGAGCGCATGGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGAPGSS*ERMGHP
Trigger: CGGATGGCCCATGCGCTCCCAGGACGAGCCCGGAGC...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp GTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGAGAGGCCTGCGCGCCTTaGGCCTCTCTCAAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VCVGTWETRLRWRSLWSREACAP*ASLKSR
Trigger: GCGGGACTTGAGAGAGGCGCAAGGCGCGCAGGCCTC...TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGAAGTTTGGGCGCCGGTaGAAGCGGACCTGGGCACAC +
Preference number: 4 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVEKFGRR*KRTWAH
Trigger: GTGTGCCCAGGTCCGCTTCCACCGGCGCCCAAACTT...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGGCAAGACCCCACTCCTaGCCGCTCAGCCTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMARPHS*PLSLAG
Trigger: GCCTGCGAGGCTGAGCGGCCAGGAGTGGGGTCTTGC...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTAGCACCACGGTGCTCTaGCTCATGTTCACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGSTTVL*LMFTQP
Trigger: GGGCTGGGTGAACATGAGCCAGAGCACCGTGGTGCT...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGCCCTGGCTGGCAAACTaGCCCAGCGACACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVEPWLAN*PSDTSK
Trigger: CTTGGAGGTGTCGCTGGGCCAGTTTGCCAGCCAGGG...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp GTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGAGCGCCCGCGGGCTACTaGGTTTGCAAGACCCCACTC +
Preference number: 4 (lower is better)
Translates to: VCVGTWETRLRWRSLWSRAPAGY*VCKTPL
Trigger: GAGTGGGGTCTTGCAAACTCAGTAGCCCGCGGGCGC...TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGTACAGTGCAGCGCGTTaGCGGGCCCGGAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLYSAAR*RARSSR
Trigger: CCGGGAGCTCCGGGCCCGGCAACGCGCTGCACTGTA...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAATACAGTGCAGCGCGTTaGCGGGCCCGGAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQYSAAR*RARSSR
Trigger: CCGGGAGCTCCGGGCCCGGCAACGCGCTGCACTGTA...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGCGTCCTGGGAGCGCATaGGCCATCCGGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLRPGSA*AIRVAL
Trigger: CAGGGCCACCCGGATGGCCCATGCGCTCCCAGGACG...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGAAGTTTGGGCGCCGGTaGAAGCGGACCTGGGCACAC +
Preference number: 4 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWKFGRR*KRTWAH
Trigger: GTGTGCCCAGGTCCGCTTCCACCGGCGCCCAAACTT...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGCCTGGGTGGCAACGGTaGCCACGCTGCCCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLPGWQR*PRCPGA
Trigger: TGCTCCCGGGCAGCGTGGCCACCGTTGCCACCCAGG...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAACCTGGGTGGCAACGGTaGCCACGCTGCCCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQPGWQR*PRCPGA
Trigger: TGCTCCCGGGCAGCGTGGCCACCGTTGCCACCCAGG...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGACACTGGTCCCTGGCTaGCAAACTGGCCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVETLVPG*QTGPAT
Trigger: TGTCGCTGGGCCAGTTTGCCAGCCAGGGACCAGTGT...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TTCCACACCGTGGCATCCGTGAGTTTCTCCCACTTGGGTGTGATGAAGTACCAGGCCCCAGTCCGGCTGTaGCGAGCACACCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: FHTVASVSFSHLGVMKYQAPVRL*RAHQLQ
Trigger: CTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGC...CTGGTACTTCATCACACCCAAGTGGGAGAAACTCACGGATGCCACGGTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp TTCCACACCGTGGCATCCGTGAGTTTCTCCCACTTGGGTGTGATGAAGTACCAGAAAGGGATCTTACAGTaGAGCGCGTTGCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FHTVASVSFSHLGVMKYQKGILQ*SALPGP
Trigger: CGGGCCCGGCAACGCGCTGCACTGTAAGATCCCTTT...CTGGTACTTCATCACACCCAAGTGGGAGAAACTCACGGATGCCACGGTGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGATTGCCCAGCCCCACTaGGTACCCCACCATGGACAG +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMIAQPH*VPHHGQ
Trigger: CTGTCCATGGTGGGGTACGCAGTGGGGCTGGGCAAT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGGGCTCGCGCGTCCGCTaGCTGGAAAGTTTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQGSRVR*LESLGA
Trigger: GGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCC...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGAGCTAGTGGCCACCTaGTCTCGCCAGGATATTCAA +
Preference number: 4 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGELVAT*SRQDIQ
Trigger: TTGAATATCCTGGCGAGATCAGGTGGCCACTAGCTC...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGTTCATGGCAGACAGGTaGGGCCACAGCTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWFMADR*GHSSAS
Trigger: GGAAGCTGAGCTGTGGCCTCACCTGTCTGCCATGAA...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATCAAGTCCCGCAGAGCTaGAGAGGCCGCCTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYQVPQS*RGRLRP
Trigger: CGGGCGCAGGCGGCCTCTGCAGCTCTGCGGGACTTG...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGGCTCCAGGGTGCCCTTaGCCACACTCACGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGAPGCP*PHSRSH
Trigger: ATGCGAACGTGAGTGTGGGCAAGGGCACCCTGGAGC...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCCGTCCTGGGAGCGCATaGGCCATCCGGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TKAIISRNWVGVQHQTATRPGSA*AIRVAL
Trigger: CAGGGCCACCCGGATGGCCCATGCGCTCCCAGGACG...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp GTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGAGATGAGGAAAGCACCTaGGTGGCAACGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: VCVGTWETRLRWRSLWSRDEEST*VATVAT
Trigger: CGTGGCCACCGTTGCCACCCAGGTGCTTTCCTCATC...TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATGGCTCGCGCGTCCGCTaGCTGGAAAGTTTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYGSRVR*LESLGA
Trigger: GGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCC...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGCTTCCACACAGACACTaGTCCCTGGCTGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMLPHRH*SLAGKL
Trigger: CAGTTTGCCAGCCAGGGACCAGTGTCTGTGTGGAAG...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGCACTGTTGGTGCAGGTaGCAATTAGAGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVEHCWCR*QLECPC
Trigger: ACAGGGACACTCTAATTGTCACCTGCACCAACAGTG...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGCTTGGGAAACTCGTCTaGGATGGAGGTCACTATGGT +
Preference number: 4 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVELGKLV*DGGHYG
Trigger: ACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAG...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGCATGGGAAACCATGCTaGGAGCAAAGGTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWHGKPC*EQRWTG
Trigger: TCCTGTCCACCTTTGCTCTCAGCATGGTTTCCCATG...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGCAAGTCCCGCAGAGCTaGAGAGGCCGCCTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKQVPQS*RGRLRP
Trigger: CGGGCGCAGGCGGCCTCTGCAGCTCTGCGGGACTTG...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAATGTTCCGCTCCAGGGTaGCCTTGCCCACACTCACGT +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQCSAPG*PCPHSR
Trigger: ACGTGAGTGTGGGCAAGGGCACCCTGGAGCGGAACA...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCCGGTGGAAGCGGACCTaGGCACACGTGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSRWKRT*AHVAAA
Trigger: CGCCGCCGCCACGTGTGCCCAGGTCCGCTTCCACCG...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTGGCAAACATAGTGTCAAGTGCTGACTGGAAAGTTTaGGCGCCGGTGGAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: SSEMEVTMVSMVANIVSSADWKV*APVEAD
Trigger: GTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGC...ACTTGACACTATGTTTGCCACCATCGAGACCATAGTGACCTCCATCTCAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGCTTCCACACAGACACTaGTCCCTGGCTGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMLPHRH*SLAGKL
Trigger: CAGTTTGCCAGCCAGGGACCAGTGTCTGTGTGGAAG...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGGAGAGAGAGGCAGCCTaGTTAAGGCTTCCGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMEREAA*LRLPGK
Trigger: TTTACCCGGAAGCCTTAACCAGGCTGCCTCTCTCTC...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp GTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGAACCATCCCACACCACTaGACTAGCACTGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VCVGTWETRLRWRSLWSRTIPHH*TSTECP
Trigger: TGGGCACTCAGTGCTAGTCCAGTGGTGTGGGATGGT...TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGACCATCCCACACCACTaGACTAGCACTGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGTIPHH*TSTECP
Trigger: TGGGCACTCAGTGCTAGTCCAGTGGTGTGGGATGGT...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGGAGCTAGTGGCCACCTaGTCTCGCCAGGATATTCAA +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGELVAT*SRQDIQ
Trigger: TTGAATATCCTGGCGAGATCAGGTGGCCACTAGCTC...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp GTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGACCTTCACTGGCAGTTTaGGTCCCAAGGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VCVGTWETRLRWRSLWSRPSLAV*VPRKRF
Trigger: GAACCTCTTCCTTGGGACTCAAACTGCCAGTGAAGG...TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGAGACTCAAGCAAGTTTaGGCTTTGGGAGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMRLKQV*ALGDKG
Trigger: CCCCTTGTCTCCCAAAGCTCAAACTTGCTTGAGTCT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACAGGAGGGGGCGAGGCCTaGGCGCCTTGCGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETGGGEA*APCASL
Trigger: GAGAGAGGCGCAAGGCGCGCAGGCCTCGCCCCCTCC...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAAGGAGGGGGCGAGGCCTaGGCGCCTTGCGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKGGGEA*APCASL
Trigger: GAGAGAGGCGCAAGGCGCGCAGGCCTCGCCCCCTCC...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGAAAGGGATCTTACAGTaGAGCGCGTTGCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQKGILQ*SALPGP
Trigger: CGGGCCCGGCAACGCGCTGCACTGTAAGATCCCTTT...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAAGCTCCAGGGTGCCCTTaGCCACACTCACGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKAPGCP*PHSRSH
Trigger: ATGCGAACGTGAGTGTGGGCAAGGGCACCCTGGAGC...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAATGTTCCGCTCCAGGGTaGCCTTGCCCACACTCACGT +
Preference number: 4 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKCSAPG*PCPHSR
Trigger: ACGTGAGTGTGGGCAAGGGCACCCTGGAGCGGAACA...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGTATTCCAAGGGTTGTTaGAGGAGCCCCAGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWYSKGC*RSPRVV
Trigger: TACTACCCTGGGGCTCCTGCAACAACCCTTGGAATA...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGAAACCACAAATGCAATaGCTGGCCCTTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMKPQMQ*LALGLP
Trigger: TGGCAGACCAAGGGCCAGGCATTGCATTTGTGGTTT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGACACTGGTCCCTGGCTaGCAAACTGGCCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQTLVPG*QTGPAT
Trigger: TGTCGCTGGGCCAGTTTGCCAGCCAGGGACCAGTGT...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGAAGAGCCATAGGTCATaGGCTCCCACTGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMKSHRS*APTGKS
Trigger: GCTTTTACCAGTGGGAGCCCATGACCTATGGCTCTT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAAACACCGTGGCATCCGTaGGTTTCTCCCACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKTPWHP*VSPTWV
Trigger: CACCCAAGTGGGAGAAACTCACGGATGCCACGGTGT...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGCGAAGCCGGCAAAGATaGTTGTGGCACTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLRSRQR*LWHCWC
Trigger: GCACCAACAGTGCCACAAGCATCTTTGCCGGCTTCG...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGGGTTGGGGTTACAAATaGCCAGCAGACTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWGWGYK*PADFPE
Trigger: TTCTGGAAAGTCTGCTGGGCATTTGTAACCCCAACC...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCAGCTCCGGGCTCGTCCTaGGAGCGCATGGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPAPGSS*ERMGHP
Trigger: CGGATGGCCCATGCGCTCCCAGGACGAGCCCGGAGC...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCGCAAGACCCCACTCCTaGCCGCTCAGCCTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSARPHS*PLSLAG
Trigger: GCCTGCGAGGCTGAGCGGCCAGGAGTGGGGTCTTGC...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATACAGACACTGGTCCCTaGCTGGCAAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYTDTGP*LANWPS
Trigger: GCTGGGCCAGTTTGCCAGCCAGGGACCAGTGTCTGT...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGCACAAATGCAATGCCTaGCCCTTGGTCTGCCACATT +
Preference number: 4 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMHKCNA*PLVCHI
Trigger: AATGTGGCAGACCAAGGGCCAGGCATTGCATTTGTG...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp GTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGAGTGTGCGTAGGTACTTaGGAAACTCGTCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: VCVGTWETRLRWRSLWSRVCVGT*ETRLRW
Trigger: CCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC...TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGTTCCAAATCCTTCACTaGCAGTTTGAGTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVEFQILH*QFESQG
Trigger: TCCTTGGGACTCAAACTGCCAGTGAAGGATTTGGAA...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATGCTCGTCCTCCTGGGTaGCAACGGTGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHARPPG*QRWPRC
Trigger: GCAGCGTGGCCACCGTTGCCACCCAGGAGGACGAGC...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGCCTAGGGCCACTTTGTaGGGAAATGAGTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGPRATL*GNEYQG
Trigger: GCCTTGATACTCATTTCCCCACAAAGTGGCCCTAGG...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp GCAATGCCTGGCCCTTGGTCTGCCACATTCTCAATGTaGACTTTGCGTTCATTGGCCATGAAGCCGATAACG +
Preference number: 4 (lower is better)
Translates to: AMPGPWSATFSM*TLRSLAMKPIT
Trigger: CGTTATCGGCTTCATGGCCAATGAACGCAAAGTCAACATTGAGAATGTGGCAGACCAAGGGCCAGGCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
3UTR CAA 72 bp CCCAGAGTAAACACTGGCTTGTGTGTGCGTAGGTACTaGGGAAACTCGTCTGAGATGGAGGTCACTATGGTC +
Preference number: 4 (lower is better)
Translates to: PRVNTGLCVRRY*GNSSEMEVTMV
Trigger: GACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACACACAAGCCAGTGTTTACTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTGCGCCCGCGGGCTACTaGGTTTGCAAGACCCCACTC +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFAPAGY*VCKTPL
Trigger: GAGTGGGGTCTTGCAAACTCAGTAGCCCGCGGGCGC...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAATGTAAGAAGAGAGAGTaGTCAGGCCTCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQCKKRE*SGLPMQ
Trigger: CTGCATGGGGAGGCCTGATCACTCTCTCTTCTTACA...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCCGCTCCCCGCGGTGTTaGGCTAAGAATGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSRSPRC*AKNGPQ
Trigger: CTGGGGCCCATTCTTAGCTCAACACCGCGGGGAGCG...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AGATGCATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAGGCGAGCTGGCCAGCACCACGGTaGTCTGGCTCATGTTCACCC +
Preference number: 4 (lower is better)
Translates to: RCIFITNIIGIQMTEQASWPAPR*SGSCSP
Trigger: GGGTGAACATGAGCCAGAGCACCGTGGTGCTGGCCA...GCTCGCCTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAGCCTGGCCCTTGGTCTaGCACATTCTCAATGTTGAC +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQAWPLV*HILNVD
Trigger: GTCAACATTGAGAATGTGGCAGACCAAGGGCCAGGC...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGCGGGTAAACCACAAATaGAATGCCTGGCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLRVNHK*NAWPLV
Trigger: GACCAAGGGCCAGGCATTGCATTTGTGGTTTACCCG...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAACCGCCTCCGGGCTGTTaGCTGGCAGTTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQPPPGC*LAVYSF
Trigger: AAATGAATAAACTGCCAGCCAACAGCCCGGAGGCGG...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGGAGAGAGAGGCAGCCTaGTTAAGGCTTCCGGGTAAA +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLEREAA*LRLPGK
Trigger: TTTACCCGGAAGCCTTAACCAGGCTGCCTCTCTCTC...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGTTCCAAATCCTTCACTaGCAGTTTGAGTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMFQILH*QFESQG
Trigger: TCCTTGGGACTCAAACTGCCAGTGAAGGATTTGGAA...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCCCTTGCTCGTCCTCCTaGGTGGCAACGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSPCSSS*VATVAT
Trigger: CGTGGCCACCGTTGCCACCCAGGAGGACGAGCAAGG...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGGTCTGCTGCAGTAATTaGGGGCTTCTCATCAATATG +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMVCCSN*GLLINM
Trigger: CATATTGATGAGAAGCCCCCAATTACTGCAGCAGAC...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGCTAAGTTATTCCTCCTaGCTCCTCTCACTCTACCAG +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGLSYSS*LLSLYQ
Trigger: CTGGTAGAGTGAGAGGAGCCAGGAGGAATAACTTAG...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp CTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTaGGTACCATTGTGCGACGTCTGCTGCAGTAATTGG +
Preference number: 4 (lower is better)
Translates to: LTLPGISWRGSF*VPLCDVCCSNW
Trigger: CCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp ACCCACACCTTTGCTCCCAGCCTGGAAGTTTTCTGCTaGATACCCAGTGTGAAAGAGAAGGAAATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: THTFAPSLEVFC*IPSVKEKEMLL
Trigger: GAGGAGCATTTCCTTCTCTTTCACACTGGGTATCAAGCAGAAAACTTCCAGGCTGGGAGCAAAGGTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGACTCTTCACTTCCACTaGCAAATGTCTTATTGGCCT +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMTLHFH*QMSYWP
Trigger: AGGCCAATAAGACATTTGTCAGTGGAAGTGAAGAGT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATACGGGAACGTGGCCGTaGAGTACACCACTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYTGTWP*STPLFL
Trigger: CAGGAAAAGTGGTGTACTTCACGGCCACGTTCCCGT...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCGTCAGGGGACCAACCTaGCCAGAAACAGTCACCATG +
Preference number: 4 (lower is better)
Translates to: TKAIISRNWVGVQHQTATVRGPT*PETVTM
Trigger: CATGGTGACTGTTTCTGGTCAGGTTGGTCCCCTGAC...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGTATTCCAAGGGTTGTTaGAGGAGCCCCAGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLYSKGC*RSPRVV
Trigger: TACTACCCTGGGGCTCCTGCAACAACCCTTGGAATA...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCCATTGTGCGACGTCTaGTGCAGTAATTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQPLCDV*CSNWGL
Trigger: AAGCCCCCAATTACTGCAGCAGACGTCGCACAATGG...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGAGCCTGGAAGTTTTCTaGTTGATACCCAGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMSLEVF*LIPSVK
Trigger: TTTCACACTGGGTATCAAGCAGAAAACTTCCAGGCT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGGGCAAGTCAAACCACTaGTTGCTTTTCAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGGKSNH*LLFRGD
Trigger: ATCACCTCTGAAAAGCAAGCAGTGGTTTGACTTGCC...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCGGCAACAGACTGAACTaGTGGAGGGTGAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: TKAIISRNWVGVQHQTATGNRLN*WRVKPA
Trigger: AGCGGGTTTCACCCTCCACCAGTTCAGTCTGTTGCC...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAACCGCCTCCGGGCTGTTaGCTGGCAGTTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKPPPGC*LAVYSF
Trigger: AAATGAATAAACTGCCAGCCAACAGCCCGGAGGCGG...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGGCTGACTGGAAAGTTTaGGCGCCGGTGGAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKADWKV*APVEAD
Trigger: GTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGC...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAACGCGCGTCCGCTGACTaGAAAGTTTGGGCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKRASAD*KVWAPV
Trigger: CACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCG...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCCCTGGCTGGCAAACTaGCCCAGCGACACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFPWLAN*PSDTSK
Trigger: CTTGGAGGTGTCGCTGGGCCAGTTTGCCAGCCAGGG...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGACAGACACTGGTCCCTaGCTGGCAAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKTDTGP*LANWPS
Trigger: GCTGGGCCAGTTTGCCAGCCAGGGACCAGTGTCTGT...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAACTTGTAGAGCTGGGATaGCCTTCCACACAGACACTG +
Preference number: 4 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKLVELG*PSTQTL
Trigger: CAGTGTCTGTGTGGAAGGCCATCCCAGCTCTACAAG...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATGCCCCAGTCCGGCTGTaGCGAGCACACCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHAPVRL*RAHQLQ
Trigger: CTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGC...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGTCAGACTGCAACCATTaGCTCAATCAGAGTTTTAGC +
Preference number: 4 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWSDCNH*LNQSFS
Trigger: GCTAAAACTCTGATTGAGCCAATGGTTGCAGTCTGA...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGTTGGCCTTGGCCTTTTaGTCCTGCAAAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQLALAF*SCKTPA
Trigger: GGCAGGTGTTTTGCAGGACCAAAAGGCCAAGGCCAA...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGGATGTATTTAATCCGTaGCAGGCAAGTCAAACCACT +
Preference number: 4 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWDVFNP*QASQTT
Trigger: AGTGGTTTGACTTGCCTGCCACGGATTAAATACATC...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp AAGAAACAAATGCAGCAGCCCAGAGTAAACACTGGCTaGTGTGTGCGTAGGTACTTGGGAAACTCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: KKQMQQPRVNTG*CVRRYLGNSSE
Trigger: CTCAGACGAGTTTCCCAAGTACCTACGCACACACAAGCCAGTGTTTACTCTGGGCTGCTGCATTTGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGGTACACCACTTTTCCTaGAGTCTTGATTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMVHHFS*SLDSFS
Trigger: GCTAAAGGAATCAAGACTTCAGGAAAAGTGGTGTAC...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGAACAGACTGAACTGGTaGAGGGTGAAACCCGCTATT +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLNRLNW*RVKPAI
Trigger: AATAGCGGGTTTCACCCTCCACCAGTTCAGTCTGTT...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AGATGCATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAGGCGAGCGGCAACAGACTGAACTaGTGGAGGGTGAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: RCIFITNIIGIQMTEQASGNRLN*WRVKPA
Trigger: AGCGGGTTTCACCCTCCACCAGTTCAGTCTGTTGCC...GCTCGCCTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCAAGGAAAGCACCTGGGTaGCAACGGTGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPRKAPG*QRWPRC
Trigger: GCAGCGTGGCCACCGTTGCCACCCAGGTGCTTTCCT...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCCAGAAACAGTCACCATaGGCACAGGCAAACAGCGCT +
Preference number: 4 (lower is better)
Translates to: TKAIISRNWVGVQHQTATQKQSP*AQANSA
Trigger: AGCGCTGTTTGCCTGTGCCCATGGTGACTGTTTCTG...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGTGTACAAAACAAACCTaGCAGCATCTGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQCTKQT*QHLWEP
Trigger: GGGCTCCCACAGATGCTGCCAGGTTTGTTTTGTACA...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAACCACATTCTCAATGTTaGCTTTGCGTTCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQPHSQC*LCVHWP
Trigger: TGGCCAATGAACGCAAAGTCAACATTGAGAATGTGG...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAACATGGAGCTCTACTATaGACGTACAAAATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQHGALL*TYKMRH
Trigger: GTGCCTCATTTTGTACGTTCATAGTAGAGCTCCATG...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGATCATGATTTTGCATTaGCCACAGACCTCATGCAAT +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGIMILH*PQTSCN
Trigger: ATTGCATGAGGTCTGTGGTCAATGCAAAATCATGAT...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCAGCACGTCCTCTCTTaGATCATCTGCCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQQHVLS*IICLKE
Trigger: TTCTTTGAGGCAGATGATTCAAGAGAGGACGTGCTG...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTATGGCCAGCACCACGGTaGTCTGGCTCATGTTCACCC +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLWPAPR*SGSCSP
Trigger: GGGTGAACATGAGCCAGAGCACCGTGGTGCTGGCCA...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TTCCACACCGTGGCATCCGTGAGTTTCTCCCACTTGGGTGTGATGAAGTACCAGGTTTGGTTTTATCTTTaGATTCTGGCGTATTCCAAG +
Preference number: 4 (lower is better)
Translates to: FHTVASVSFSHLGVMKYQVWFYL*ILAYSK
Trigger: CTTGGAATACGCCAGAATGCAAAGATAAAACCAAAC...CTGGTACTTCATCACACCCAAGTGGGAGAAACTCACGGATGCCACGGTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATAAACCACAAATGCAATaGCTGGCCCTTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYKPQMQ*LALGLP
Trigger: TGGCAGACCAAGGGCCAGGCATTGCATTTGTGGTTT...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATGAAACCTCCAGACATTaGCCAGCCCCACTGCGTACC +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHETSRH*PAPLRT
Trigger: GGTACGCAGTGGGGCTGGGCAATGTCTGGAGGTTTC...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAAGCACCACGGTGCTCTaGCTCATGTTCACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLSTTVL*LMFTQP
Trigger: GGGCTGGGTGAACATGAGCCAGAGCACCGTGGTGCT...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGATCTGTATTTTGGGATaGTCACTGATAACACAGGAA +
Preference number: 4 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWICILG*SLITQE
Trigger: TTCCTGTGTTATCAGTGACCATCCCAAAATACAGAT...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGACCCTGAGTGATCATTaGAAAACCCATGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMTLSDH*KTHDEE
Trigger: TTCTTCATCATGGGTTTTCCAATGATCACTCAGGGT...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGACCCTGAGTGATCATTaGAAAACCCATGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGTLSDH*KTHDEE
Trigger: TTCTTCATCATGGGTTTTCCAATGATCACTCAGGGT...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGTATCACAAACATAATTaGGATCCAGATGACGGAACA +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMYHKHN*DPDDGT
Trigger: TGTTCCGTCATCTGGATCCCAATTATGTTTGTGATA...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGATCCCCAGTGGTGACTaGAAATATAAACTTAACCAC +
Preference number: 4 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGIPSGD*KYKLNH
Trigger: GTGGTTAAGTTTATATTTCCAGTCACCACTGGGGAT...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCGAAATGCTCCTCTGTTaGCCTTGGCCTTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: TKAIISRNWVGVQHQTATEMLLC*PWPFGP
Trigger: AGGACCAAAAGGCCAAGGCCAACAGAGGAGCATTTC...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp TTGGTTTTATCTTTGCATTCTGGCGTATTCCAAGGGTaGTTGCAGGAGCCCCAGGGTAGTACAGACACAAAG +
Preference number: 4 (lower is better)
Translates to: LVLSLHSGVFQG*LQEPQGSTDTK
Trigger: CTTTGTGTCTGTACTACCCTGGGGCTCCTGCAACAACCCTTGGAATACGCCAGAATGCAAAGATAAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGTCAGCACAAAGTACTTaGAGTACTCTTCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLSAQST*STLHFH
Trigger: GTGGAAGTGAAGAGTACTTCAAGTACTTTGTGCTGA...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp AGATGCATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAGGCGAGCATGATGCATACACAATaGCCCAAGCCAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RCIFITNIIGIQMTEQASMMHTQ*PKPGRG
Trigger: GCCTCTTCCTGGCTTGGGTCATTGTGTATGCATCAT...GCTCGCCTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAACACCGTGGCATCCGTaGGTTTCTCCCACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLTPWHP*VSPTWV
Trigger: CACCCAAGTGGGAGAAACTCACGGATGCCACGGTGT...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAACCACATTCTCAATGTTaGCTTTGCGTTCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKPHSQC*LCVHWP
Trigger: TGGCCAATGAACGCAAAGTCAACATTGAGAATGTGG...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCTCATCAGGTAAGGGATaGGGAAAGCACCTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSSSGKG*GKHLPR
Trigger: ACGGGGGAGGTGCTTTCCTCATCCCTTACCTGATGA...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATACACTGGCTTGTGTGTaGGTAGGTACTTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYTLACV*VGTWET
Trigger: AGTTTCCCAAGTACCTACGCACACACAAGCCAGTGT...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGTTGTGCGACGTCTGCTaGAGTAATTGGGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKLCDVC*SNWGLL
Trigger: GAGAAGCCCCCAATTACTGCAGCAGACGTCGCACAA...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCAACAGACTGAACTGGTaGAGGGTGAAACCCGCTATT +
Preference number: 4 (lower is better)
Translates to: TKAIISRNWVGVQHQTATNRLNW*RVKPAI
Trigger: AATAGCGGGTTTCACCCTCCACCAGTTCAGTCTGTT...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGATCTGTATTTTGGGATaGTCACTGATAACACAGGAA +
Preference number: 4 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMICILG*SLITQE
Trigger: TTCCTGTGTTATCAGTGACCATCCCAAAATACAGAT...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATGAAACTCGTCTGAGATaGAGGTCACTATGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYETRLR*RSLWSR
Trigger: TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTC...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGACATATGTTTATTCATaGGCAACAGTACCCACAAAA +
Preference number: 4 (lower is better)
Translates to: GHRQTALQVVYVALYCSMTYVYS*ATVPTK
Trigger: TTTTGTGGGTACTGTTGCCCATGAATAAACATATGT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp ATAGGAAGCTTCACTTTCACAAATCCTAGGGCCACTTaGTGGGGAAATGAGTATCAAGGCAGAATCACCCAC +
Preference number: 4 (lower is better)
Translates to: IGSFTFTNPRAT*WGNEYQGRITH
Trigger: GTGGGTGATTCTGCCTTGATACTCATTTCCCCACAAAGTGGCCCTAGGATTTGTGAAAGTGAAGCTTCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCATCATCAGGTAAGGGATaGGGAAAGCACCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPSSGKG*GKHLGG
Trigger: GCCACCCAGGTGCTTTCCTCATCCCTTACCTGATGA...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGGTACACCACTTTTCCTaGAGTCTTGATTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQVHHFS*SLDSFS
Trigger: GCTAAAGGAATCAAGACTTCAGGAAAAGTGGTGTAC...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAACGGGAACGTGGCCGTaGAGTACACCACTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLTGTWP*STPLFL
Trigger: CAGGAAAAGTGGTGTACTTCACGGCCACGTTCCCGT...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGCACTGTTGGTGCAGGTaGCAATTAGAGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKHCWCR*QLECPC
Trigger: ACAGGGACACTCTAATTGTCACCTGCACCAACAGTG...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGGCATCAGGAAAAAGATaGTGGCCCAGAACGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKASGKR*WPRTER
Trigger: TCTCTCCGTTCTGGGCCATCATCTTTTTCCTGATGC...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAATTGAGGGAAGAAAACTaGCAGTTCAATCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQLREEN*QFNQSH
Trigger: GTGACTTTGATTGAACTGTCAGTTTTCTTCCCTCAA...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCCGGGTAAACCACAAATaGAATGCCTGGCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSRVNHK*NAWPLV
Trigger: GACCAAGGGCCAGGCATTGCATTTGTGGTTTACCCG...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCTTATTCTCATCCCCTTaGTCGTCCTCCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSLFSSP*SSSWVA
Trigger: TGCCACCCAGGAGGACGAGCAAGGGGATGAGAATAA...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AGATGCATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAGGCGAGCCTCCGGGCTGTTGGCTaGCAGTTTATTCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: RCIFITNIIGIQMTEQASLRAVG*QFIHFL
Trigger: AAGGAAATGAATAAACTGCCAGCCAACAGCCCGGAG...GCTCGCCTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp CTCGATGGTGGCAAACATAGTGTCAAGTCCAAGAGTGAGGAGCATCAGGAAAAAAGAAAGTCGAGTTCTTaGTCTGTATTTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: LDGGKHSVKSKSEEHQEKRKSSS*SVFWDG
Trigger: ACCATCCCAAAATACAGATCAAGAACTCGACTTTCT...TTTTTCCTGATGCTCCTCACTCTTGGACTTGACACTATGTTTGCCACCATCGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATGATTCCTTTAGCCAATaGTGCATACACAATGACCCA +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYDSFSQ*CIHNDP
Trigger: TGGGTCATTGTGTATGCATCATTGGCTAAAGGAATC...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTTGGGAAACTCGTCTaGGATGGAGGTCACTATGGT +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFLGKLV*DGGHYG
Trigger: ACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAG...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTACCTTCACTGGCAGTTTaGGTCCCAAGGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLPSLAV*VPRKRF
Trigger: GAACCTCTTCCTTGGGACTCAAACTGCCAGTGAAGG...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCGAGGCACAACTTATATaGTGGCTTCTTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSEAQLI*WLLGQR
Trigger: CCTCTGCCCAAGAAGCCATCATATAAGTTGTGCCTC...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAATCTCCTCTAAGGATATaGCAGGATTACTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SYCASLWEEDNDLQPREQSPLRI*QDYCFS
Trigger: TGAAAAACAGTAATCCTGTCATATCCTTAGAGGAGA...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTCGAAGCCGGCAAAGATaGTTGTGGCACTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSRSRQR*LWHCWC
Trigger: GCACCAACAGTGCCACAAGCATCTTTGCCGGCTTCG...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACAGCCTGGCCCTTGGTCTaGCACATTCTCAATGTTGAC +
Preference number: 4 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETAWPLV*HILNVD
Trigger: GTCAACATTGAGAATGTGGCAGACCAAGGGCCAGGC...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTTTGGCCTTTTGGTCCTaGAAAACACCTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFLAFWS*KTPATQ
Trigger: CTGTGTGGCAGGTGTTTTGCAGGACCAAAAGGCCAA...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGAATCACCCACACCTTTaGTCCCAGCCTGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKNHPHL*SQPGSF
Trigger: AAAACTTCCAGGCTGGGAGCAAAGGTGTGGGTGATT...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCACAAATGCAATGCCTaGCCCTTGGTCTGCCACATT +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFHKCNA*PLVCHI
Trigger: AATGTGGCAGACCAAGGGCCAGGCATTGCATTTGTG...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATGTGTGCGTAGGTACTTaGGAAACTCGTCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHVCVGT*ETRLRW
Trigger: CCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAACAGGATCAAGTCTaGACCATCCCACACCACTGG +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSKQDQV*TIPHHW
Trigger: CCAGTGGTGTGGGATGGTCCAGACTTGATCCTGTTT...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTCCTCTGTTGGCCTTaGCCTTTTGGTCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFLLCWP*PFGPAK
Trigger: TTTTGCAGGACCAAAAGGCCAAGGCCAACAGAGGAG...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AGATGCATTTTTATCACAAACATAATTGGGATCCAGATGACGGAACAGGCGAGCACTCTTCACTTCCACTaGCAAATGTCTTATTGGCCT +
Preference number: 4 (lower is better)
Translates to: RCIFITNIIGIQMTEQASTLHFH*QMSYWP
Trigger: AGGCCAATAAGACATTTGTCAGTGGAAGTGAAGAGT...GCTCGCCTGTTCCGTCATCTGGATCCCAATTATGTTTGTGATAAAAATGCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAAATGATGCATACACAATaGCCCAAGCCAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKMMHTQ*PKPGRG
Trigger: GCCTCTTCCTGGCTTGGGTCATTGTGTATGCATCAT...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTGCTCAGAGGTGACCTaGGCAAAGACCACATTTCAA +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHCSEVT*AKTTFQ
Trigger: TTGAAATGTGGTCTTTGCTCAGGTCACCTCTGAGCA...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTACACTGGCTTGTGTGTaGGTAGGTACTTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFTLACV*VGTWET
Trigger: AGTTTCCCAAGTACCTACGCACACACAAGCCAGTGT...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATCTTCCAGGGGCCAGATaGATTTTTATCACAAACATA +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYLPGAR*IFITNI
Trigger: TATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAG...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR GCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAACGTCCAGCATCAGACTaGAACCATTGGCTCAATCAG +
Preference number: 4 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKRPASD*NHWLNQ
Trigger: CTGATTGAGCCAATGGTTGCAGTCTGATGCTGGACG...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCCAACTCAAATCCAGGTaGAACAACAGTAGTATGATC +
Preference number: 4 (lower is better)
Translates to: TKAIISRNWVGVQHQTATQLKSR*NNSSMI
Trigger: GATCATACTACTGTTGTTGCACCTGGATTTGAGTTG...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCAGTCAAACCACTGCTTaGTTTTCAGAGGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: TKAIISRNWVGVQHQTATSQTTA*FSEVMN
Trigger: ATTCATCACCTCTGAAAAGCAAGCAGTGGTTTGACT...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATGTTTATTCATTTCCTTaGGAGCACTGCAATCCATGT +
Preference number: 4 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYVYSFP*EHCNPC
Trigger: ACATGGATTGCAGTGCTCCCAAGGAAATGAATAAAC...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATCTCCGGGCTGTTGGCTaGCAGTTTATTCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHLRAVG*QFIHFL
Trigger: AAGGAAATGAATAAACTGCCAGCCAACAGCCCGGAG...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTCTTGTAGAGCTGGGATaGCCTTCCACACAGACACTG +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSLVELG*PSTQTL
Trigger: CAGTGTCTGTGTGGAAGGCCATCCCAGCTCTACAAG...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCGAAACTCGTCTGAGATaGAGGTCACTATGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSETRLR*RSLWSR
Trigger: TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTC...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACAAAGAGCCATAGGTCATaGGCTCCCACTGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETKSHRS*APTGKS
Trigger: GCTTTTACCAGTGGGAGCCCATGACCTATGGCTCTT...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGCTACCAGGTATCAGCTaGAGAGGCTCATTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKLPGIS*RGSFLV
Trigger: TACCAAAAATGAGCCTCTCCAGCTGATACCTGGTAG...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp TTGAAGTACTCTTCACTTCCACTGACAAATGTCTTATaGGCCTGGCTGGTGAAATTAACCATTGTCACGTTG +
Preference number: 4 (lower is better)
Translates to: LKYSSLPLTNVL*AWLVKLTIVTL
Trigger: CAACGTGACAATGGTTAATTTCACCAGCCAGGCCAATAAGACATTTGTCAGTGGAAGTGAAGAGTACTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTGTAACTGGAGATTGCTaGTCCAAACGAAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFVTGDC*SKRRKQ
Trigger: CTGTTTCCTTCGTTTGGATCAGCAATCTCCAGTTAC...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGCACCATTCTACACAGTaGACCAATGAAAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKHHSTQ*TNESLS
Trigger: GGAAAGACTTTCATTGGTTCACTGTGTAGAATGGTG...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACAGGTTGGGGTTACAAATaGCCAGCAGACTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETGWGYK*PADFPE
Trigger: TTCTGGAAAGTCTGCTGGGCATTTGTAACCCCAACC...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAAGATGGAGGTCACTATaGTCTCGATGGTGGCAAACA +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLRWRSL*SRWWQT
Trigger: TGTTTGCCACCATCGAGACCATAGTGACCTCCATCT...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAATGGGAGGAGAGCTATaGAAAACATTAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLMGGEL*KTLGGG
Trigger: GCCTCCTCCTAATGTTTTCCATAGCTCTCCTCCCAT...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTCAGCACAAAGTACTTaGAGTACTCTTCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHSAQST*STLHFH
Trigger: GTGGAAGTGAAGAGTACTTCAAGTACTTTGTGCTGA...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGATTTCTGCAGACATATaGTCAGCTCTCATTAGAGTG +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKISADI*SALIRV
Trigger: CACTCTAATGAGAGCTGATCATATGTCTGCAGAAAT...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCACTGGAAGTTCATATTaGTGTTGGCAAATGGCGATG +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSTGSSY*CWQMAM
Trigger: CATCGCCATTTGCCAACATCAATATGAACTTCCAGT...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGGCAACAACAGTAGTATaGTCTTGCCATCTCATCTTA +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKATTVV*SCHLIL
Trigger: TAAGATGAGATGGCAAGATCATACTACTGTTGTTGC...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTATATGTAGCTCTTTACTaGAGCATGCGACACTATGCC +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLYVALY*SMRHYA
Trigger: GGCATAGTGTCGCATGCTGCAGTAAAGAGCTACATA...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCTTTTTGGTACCATTGTaGGACGTCTGCTGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSFLVPL*DVCCSN
Trigger: ATTACTGCAGCAGACGTCGCACAATGGTACCAAAAA...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGAGCTATAGTCTTAATTaGCTCACTCGCTACTTACCT +
Preference number: 4 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKSYSLN*LTRYLP
Trigger: AGGTAAGTAGCGAGTGAGCCAATTAAGACTATAGCT...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTAGAAATCTGTGTTCATaGCAGACAGGTGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSRNLCS*QTGEAT
Trigger: TGTGGCCTCACCTGTCTGCCATGAACACAGATTTCT...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTGGAGAGGCTCATTTTTaGTACCATTGTGCGACGTCT +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSGEAHF*YHCATS
Trigger: AGACGTCGCACAATGGTACCAAAAATGAGCCTCTCC...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATATAATTAGCAGAAATTaGGTTGGCGTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHIISRN*VGVQHQ
Trigger: CTGATGCTGGACGCCAACCCAATTTCTGCTAATTAT...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp GCGGTCATGCAGAAAGTCGAGTTCTTGATCTGTATTTaGGGATGGTCACTGATAACACAGGAATCTAATAAA +
Preference number: 4 (lower is better)
Translates to: AVMQKVEFLICI*GWSLITQESNK
Trigger: TTTATTAGATTCCTGTGTTATCAGTGACCATCCCAAAATACAGATCAAGAACTCGACTTTCTGCATGACCGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR TCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTAGAAAGTCGAGTTCTTaGTCTGTATTTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFRKSSS*SVFWDG
Trigger: ACCATCCCAAAATACAGATCAAGAACTCGACTTTCT...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTATGGATACCTCTCTATTaGCAAAACCACGCATACCTA +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLWIPLY*QNHAYL
Trigger: TAGGTATGCGTGGTTTTGTCAATAGAGAGGTATCCA...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTATACACAGTGAACCAATaGAAGTCTTTCCTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLYTVNQ*KSFLSY
Trigger: GTAGCTGAGGAAAGACTTTCATTGGTTCACTGTGTA...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTCACTTTGTGGGGAAATaGGTATCAAGGCAGAATCAC +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSHFVGK*VSRQNH
Trigger: GTGATTCTGCCTTGATACTCATTTCCCCACAAAGTG...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAAACAAGATCACCACATTaGTCAGTTCTGTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKTRSPH*SVLFKS
Trigger: GGACTTGAACAGAACTGAGCAATGTGGTGATCTTGT...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCCACTTTGCCAATTTCTaGAGACATATGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSHFANF*RHMISS
Trigger: AGAGCTGATCATATGTCTGCAGAAATTGGCAAAGTG...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTACTCACAAGTGGAAAATaGTCCACCATTCTACACAGT +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLLTSGK*STILHS
Trigger: ACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAG...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
3UTR CAA 72 bp GTCTTGAACTTTGTGTGTCTGAACAAGATCACCACATaGCTCAGTTCTGTTCAAGTCCAAATAAAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VLNFVCLNKITT*LSSVQVQIKSC
Trigger: ACAAGACTTTATTTGGACTTGAACAGAACTGAGCAATGTGGTGATCTTGTTCAGACACACAAAGTTCAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTGATTCCTTTAGCCAATaGTGCATACACAATGACCCA +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSDSFSQ*CIHNDP
Trigger: TGGGTCATTGTGTATGCATCATTGGCTAAAGGAATC...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTCAGTGGTGTCCAAATTaGATGGTCTTGTCTTACATC +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSQWCPN*MVLSYI
Trigger: GATGTAAGACAAGACCATTCAATTTGGACACCACTG...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTGTACTACCAGTGCAGTaGATATTGTGGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSVLPVQ*ILWLLS
Trigger: AGAAAGCAACCACAATATTCACTGCACTGGTAGTAC...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATATACAAGATTTGAACTaGAAAACTTTGCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHIQDLN*KTLPET
Trigger: GGTCTCAGGCAAAGTTTTTCAGTTCAAATCTTGTAT...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp TATAAACTTAACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCGTTTGGTTTTATCTTTaGATTCTGGCGTATTCCAAG +
Preference number: 4 (lower is better)
Translates to: YKLNHLSGVQIEWSCLTSVWFYL*ILAYSK
Trigger: CTTGGAATACGCCAGAATGCAAAGATAAAACCAAAC...GGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGTTAAGTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAACAGCATGCGACACTATaGCTACTTTTCTACATAATC +
Preference number: 4 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKQHATL*LLFYII
Trigger: GATTATGTAGAAAAGTAGGCATAGTGTCGCATGCTG...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTAATGTCTTATTGGCCTaGCTGGTGAAATTAACCATT +
Preference number: 4 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFNVLLA*LVKLTI
Trigger: AATGGTTAATTTCACCAGCCAGGCCAATAAGACATT...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCACAGAAGATGTTAGGCTaGAATCCAATCATCATCTCT +
Preference number: 4 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPQKMLG*NPIIIS
Trigger: AGAGATGATGATTGGATTCCAGCCTAACATCTTCTG...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CCA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAACAGAAGATGTTAGGCTaGAATCCAATCATCATCTCT +
Preference number: 4 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKQKMLG*NPIIIS
Trigger: AGAGATGATGATTGGATTCCAGCCTAACATCTTCTG...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR TCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTACATTGAGGTCATCATaGTTTTGCATTGACCACAGA +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSTLRSS*FCIDHR
Trigger: TCTGTGGTCAATGCAAAATCATGATGACCTCAATGT...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTCTTCCAGGGGCCAGATaGATTTTTATCACAAACATA +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSLPGAR*IFITNI
Trigger: TATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAG...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CCA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAGGTGTCCAAATTGAATaGTCTTGTCTTACATCCAAA +
Preference number: 4 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLGVQIE*SCLTSK
Trigger: TTTGGATGTAAGACAAGACCATTCAATTTGGACACC...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR GCA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTAAAATGTACTACCAGTaGAGTGAATATTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSKMYYQ*SEYCGC
Trigger: GCAACCACAATATTCACTGCACTGGTAGTACATTTT...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS CCA 90 bp CCTCGCAGGCTCGCGCGTCCGCTGACTGGAAAGTTTGGGCGCCGGTaGAAGCGGACCTGGGCACACGTGGCGGCGGCGGGGCGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PRRLARPLTGKFGRR*KRTWAHVAAAGRQP
Trigger: CGGCTGCCGCCCCGCCGCCGCCACGTGTGCCCAGGTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCCTGCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 90 bp GGCCGCTCAGCCTCGCAGGCTCGCGCGTCCGCTGACTGGAAAGTTTaGGCGCCGGTGGAAGCGGACCTGGGCACACGTGGCGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: GRSASQARASADWKV*APVEADLGTRGGGG
Trigger: CCCGCCGCCGCCACGTGTGCCCAGGTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCCTGCGAGGCTGAGCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS GCA 90 bp GGGCGAGGCCTGCGCGCCTTGCGCCTCTCTCAAGTCCCGCAGAGCTaGAGAGGCCGCCTGCGCCCGCGGGCTACTGAGTTTGCAAGACCC +
Preference number: 5 (lower is better)
Translates to: GRGLRALRLSQVPQS*RGRLRPRATEFARP
Trigger: GGGTCTTGCAAACTCAGTAGCCCGCGGGCGCAGGCGGCCTCTGCAGCTCTGCGGGACTTGAGAGAGGCGCAAGGCGCGCAGGCCTCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 90 bp CCCACTCCTGGCCGCTCAGCCTCGCAGGCTCGCGCGTCCGCTGACTaGAAAGTTTGGGCGCCGGTGGAAGCGGACCTGGGCACACGTGGC +
Preference number: 5 (lower is better)
Translates to: PTPGRSASQARASAD*KVWAPVEADLGTRG
Trigger: GCCACGTGTGCCCAGGTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCCTGCGAGGCTGAGCGGCCAGGAGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS TCA 90 bp AGACCCCACTCCTGGCCGCTCAGCCTCGCAGGCTCGCGCGTCCGCTaGCTGGAAAGTTTGGGCGCCGGTGGAAGCGGACCTGGGCACACG +
Preference number: 5 (lower is better)
Translates to: RPHSWPLSLAGSRVR*LESLGAGGSGPGHT
Trigger: CGTGTGCCCAGGTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCCTGCGAGGCTGAGCGGCCAGGAGTGGGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS GCA 90 bp GCGCCTTGCGCCTCTCTCAAGTCCCGCAGAGCTGCAGAGGCCGCCTaGGCCCGCGGGCTACTGAGTTTGCAAGACCCCACTCCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: APCASLKSRRAAEAA*ARGLLSLQDPTPGR
Trigger: GCGGCCAGGAGTGGGGTCTTGCAAACTCAGTAGCCCGCGGGCGCAGGCGGCCTCTGCAGCTCTGCGGGACTTGAGAGAGGCGCAAGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS GCA 90 bp TCATGTTCACCCAGCCCACAACAGGGGTATTGTTCCGCTCCAGGGTaGCCTTGCCCACACTCACGTTCGCATCCCCCTCCGGGCCTCGCA +
Preference number: 5 (lower is better)
Translates to: SCSPSPQQGYCSAPG*PCPHSRSHPPPGLA
Trigger: TGCGAGGCCCGGAGGGGGATGCGAACGTGAGTGTGGGCAAGGGCACCCTGGAGCGGAACAATACCCCTGTTGTGGGCTGGGTGAACATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 90 bp GGGAGCACGGACGTGATTCCATCCGTGGCCAGCACCACGGTGCTCTaGCTCATGTTCACCCAGCCCACAACAGGGGTATTGTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GSTDVIPSVASTTVL*LMFTQPTTGVLFRS
Trigger: GGAGCGGAACAATACCCCTGTTGTGGGCTGGGTGAACATGAGCCAGAGCACCGTGGTGCTGGCCACGGATGGAATCACGTCCGTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS-3UTR CAA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGCGAGGCCTGCGCGCCTaGCGCCTCTCTCAAGTCCCG +
Preference number: 5 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVERGLRA*RLSQVP
Trigger: CGGGACTTGAGAGAGGCGCAAGGCGCGCAGGCCTCG...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGTTACAGTGCAGCGCGTaGCCGGGCCCGGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVELQCSA*PGPELP
Trigger: CGGGAGCTCCGGGCCCGGCAACGCGCTGCACTGTAA...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp AAGAATGGGCCCCAGTCCGGCTGTGGCGAGCACACCAACTTCAGCCTCTCAATAGGCGTATTCCAAGGGTaGTTGCAGGAGCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: KNGPQSGCGEHTNFSLSIGVFQG*LQEPQG
Trigger: ACCCTGGGGCTCCTGCAACAACCCTTGGAATACGCC...TATTGAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGGGGCCCATTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGCCGCCTCCGGGCTGTaGGCTGGCAGTTTATTCATT +
Preference number: 5 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGAASGL*AGSLFI
Trigger: AATGAATAAACTGCCAGCCAACAGCCCGGAGGCGGC...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp TTCCACACCGTGGCATCCGTGAGTTTCTCCCACTTGGGTGTGATGAAGTACCAGCGCGGGCTACTGAGTTaGCAAGACCCCACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: FHTVASVSFSHLGVMKYQRGLLS*QDPTPG
Trigger: GCCAGGAGTGGGGTCTTGCAAACTCAGTAGCCCGCG...CTGGTACTTCATCACACCCAAGTGGGAGAAACTCACGGATGCCACGGTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGCGCGGGCTACTGAGTTaGCAAGACCCCACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWRGLLS*QDPTPG
Trigger: GCCAGGAGTGGGGTCTTGCAAACTCAGTAGCCCGCG...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGCCCACAACAGGGGTATaGTTCCGCTCCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GHRQTALQVVYVALYCSMPTTGV*FRSRVP
Trigger: GGGCACCCTGGAGCGGAACAATACCCCTGTTGTGGG...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGCTTATTCTCATCCCCTaGCTCGTCCTCCTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWLILIP*LVLLGG
Trigger: GCCACCCAGGAGGACGAGCAAGGGGATGAGAATAAG...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS CCA 90 bp GGAGCACTGCAATCCATGTCTGACACAGGCAACAGACTGAACTGGTaGAGGGTGAAACCCGCTATTGACAAGACTGGGTTTGGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GALQSMSDTGNRLNW*RVKPAIDKTGFGSG
Trigger: GCCTGAGCCAAACCCAGTCTTGTCAATAGCGGGTTTCACCCTCCACCAGTTCAGTCTGTTGCCTGTGTCAGACATGGATTGCAGTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp TCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTGGCAAACATAGTGTCAAGTCCCACAACAGGGGTATaGTTCCGCTCCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SSEMEVTMVSMVANIVSSPTTGV*FRSRVP
Trigger: GGGCACCCTGGAGCGGAACAATACCCCTGTTGTGGG...ACTTGACACTATGTTTGCCACCATCGAGACCATAGTGACCTCCATCTCAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTTGTGTGCGTAGGTACTaGGGAAACTCGTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGCVRRY*GNSSEM
Trigger: CATCTCAGACGAGTTTCCCAAGTACCTACGCACACA...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGGTATTCCAAGGGTTGTaGCAGGAGCCCCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMVFQGL*QEPQGS
Trigger: ACTACCCTGGGGCTCCTGCAACAACCCTTGGAATAC...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS CCA 90 bp TTGGGAGCACTGCAATCCATGTCTGACACAGGCAACAGACTGAACTaGTGGAGGGTGAAACCCGCTATTGACAAGACTGGGTTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LGALQSMSDTGNRLN*WRVKPAIDKTGFGS
Trigger: TGAGCCAAACCCAGTCTTGTCAATAGCGGGTTTCACCCTCCACCAGTTCAGTCTGTTGCCTGTGTCAGACATGGATTGCAGTGCTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS CCA 90 bp GGCAGAGAGGAAAAACAGGATCAAGTCTGGACCATCCCACACCACTaGACTAGCACTGAGTGCCCAGTTCCAAATCCTTCACTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: GREEKQDQVWTIPHH*TSTECPVPNPSLAV
Trigger: AACTGCCAGTGAAGGATTTGGAACTGGGCACTCAGTGCTAGTCCAGTGGTGTGGGATGGTCCAGACTTGATCCTGTTTTTCCTCTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525748.6
ENST00000528440.1
CDS-3UTR CAA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTATTACAGTGCAGCGCGTaGCCGGGCCCGGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLLQCSA*PGPELP
Trigger: CGGGAGCTCCGGGCCCGGCAACGCGCTGCACTGTAA...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGAGCCGGCAAAGATGCTaGTGGCACTGTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQSRQRC*WHCWCR
Trigger: CCTGCACCAACAGTGCCACAAGCATCTTTGCCGGCT...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGGCCACATTCTCAATGTaGACTTTGCGTTCATTGGCC +
Preference number: 5 (lower is better)
Translates to: GHRQTALQVVYVALYCSMATFSM*TLRSLA
Trigger: GGCCAATGAACGCAAAGTCAACATTGAGAATGTGGC...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAAGGATGAAGTCCAGTTaGCTGGACCAGTTCCCTCGG +
Preference number: 5 (lower is better)
Translates to: SYCASLWEEDNDLQPREQRMKSS*LDQFPR
Trigger: CCGAGGGAACTGGTCCAGCAAACTGGACTTCATCCT...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp ATTAGGACAGAGATGATCAGCATCGCGATGCCACAGCCTTGTAGAGCTGGGATGATGCTTGTGGCACTGTaGGTGCAGGTGACAATTAGA +
Preference number: 5 (lower is better)
Translates to: IRTEMISIAMPQPCRAGMMLVAL*VQVTIR
Trigger: TCTAATTGTCACCTGCACCAACAGTGCCACAAGCAT...CATCCCAGCTCTACAAGGCTGTGGCATCGCGATGCTGATCATCTCTGTCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGGTGGATACCTCTCTATaGACAAAACCACGCATACCT +
Preference number: 5 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWVDTSL*TKPRIP
Trigger: AGGTATGCGTGGTTTTGTCAATAGAGAGGTATCCAC...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGTTATATGATGGCTTCTaGGGCAGAGGTGGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: GHRQTALQVVYVALYCSMLYDGF*GRGGGN
Trigger: ATTTCCTCCACCTCTGCCCAAGAAGCCATCATATAA...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGTCATTTTTGGTACCATaGTGCGACGTCTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGSFLVP*CDVCCS
Trigger: ACTGCAGCAGACGTCGCACAATGGTACCAAAAATGA...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAGAATCACCCACACCTTaGCTCCCAGCCTGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: SYCASLWEEDNDLQPREQESPTP*LPAWKF
Trigger: AAACTTCCAGGCTGGGAGCAAAGGTGTGGGTGATTC...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp CCAAGGAAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTACTTTTCCTGAAGTCTaGATTCCTTTAGCCAATGAT +
Preference number: 5 (lower is better)
Translates to: PRKRFPRGRSCSCNAPRGTFPEV*IPLAND
Trigger: ATCATTGGCTAAAGGAATCAAGACTTCAGGAAAAGT...ACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp TCGTCTGAGATGGAGGTCACTATGGTCTCGATGGTGGCAAACATAGTGTCAAGTGTGAGTTTCTCCCACTaGGGTGTGATGAAGTACCAG +
Preference number: 5 (lower is better)
Translates to: SSEMEVTMVSMVANIVSSVSFSH*GVMKYQ
Trigger: CTGGTACTTCATCACACCCAAGTGGGAGAAACTCAC...ACTTGACACTATGTTTGCCACCATCGAGACCATAGTGACCTCCATCTCAGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAGTGAGTTTCTCCCACTaGGGTGTGATGAAGTACCAG +
Preference number: 5 (lower is better)
Translates to: SYCASLWEEDNDLQPREQVSFSH*GVMKYQ
Trigger: CTGGTACTTCATCACACCCAAGTGGGAGAAACTCAC...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp TCCTCCTGGCTCCTCTCACTCTACCAGGTATCAGCTGGAGAGGCTCATTTTTGGCACAGGATCGTGACATaGAACCATGGTGCTAAATAT +
Preference number: 5 (lower is better)
Translates to: SSWLLSLYQVSAGEAHFWHRIVT*NHGAKY
Trigger: ATATTTAGCACCATGGTTCAATGTCACGATCCTGTG...CCAAAAATGAGCCTCTCCAGCTGATACCTGGTAGAGTGAGAGGAGCCAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCGCTCCTCTGTTGGCCTaGGCCTTTTGGTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: TKAIISRNWVGVQHQTATAPLLA*AFWSCK
Trigger: TTTGCAGGACCAAAAGGCCAAGGCCAACAGAGGAGC...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp ACAAAAGCAATAATTAGCAGAAATTGGGTTGGCGTCCAGCATCAGACTGCAACCGGAAATGCTCCTCTGTaGGCCTTGGCCTTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: TKAIISRNWVGVQHQTATGNAPL*ALAFWS
Trigger: GGACCAAAAGGCCAAGGCCAACAGAGGAGCATTTCC...GGTTGCAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAATTATTGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAGAAAACACTTTCTCTTaGGCTGCAGGCTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SYCASLWEEDNDLQPREQENTFS*AAGCSE
Trigger: CTCTGAGCAGCCTGCAGCCAAAGAGAAAGTGTTTTC...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGAGTTTGGTTTTATCTTaGCATTCTGGCGTATTCCAA +
Preference number: 5 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVESLVLS*HSGVFQ
Trigger: TTGGAATACGCCAGAATGCAAAGATAAAACCAAACT...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGGCCACATTCTCAATGTaGACTTTGCGTTCATTGGCC +
Preference number: 5 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLATFSM*TLRSLA
Trigger: GGCCAATGAACGCAAAGTCAACATTGAGAATGTGGC...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGTGTGTGCGTAGGTACTaGGGAAACTCGTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQCVRRY*GNSSEM
Trigger: CATCTCAGACGAGTTTCCCAAGTACCTACGCACACA...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGAGAGTAAACACTGGCTaGTGTGTGCGTAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLRVNTG*CVRRYL
Trigger: CAAGTACCTACGCACACACAAGCCAGTGTTTACTCT...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp AGTTATTGTGCTAGCCTCTGGGAAGAGGACAATGACCTACAGCCAAGGGAACAAAGAGTAAACACTGGCTaGTGTGTGCGTAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: SYCASLWEEDNDLQPREQRVNTG*CVRRYL
Trigger: CAAGTACCTACGCACACACAAGCCAGTGTTTACTCT...TTGTTCCCTTGGCTGTAGGTCATTGTCCTCTTCCCAGAGGCTAGCACAATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAGAGGTTCCCAAGGGGTCGATCATGTTCTTGTAACGCTCCCCGCGGTGTTGAGATCTTCACAGAATCTTaGCAAGCCATACACATAAGA +
Preference number: 5 (lower is better)
Translates to: KRFPRGRSCSCNAPRGVEIFTES*QAIHIR
Trigger: TCTTATGTGTATGGCTTGCAAAGATTCTGTGAAGAT...CTCAACACCGCGGGGAGCGTTACAAGAACATGATCGACCCCTTGGGAACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp TGGAGAGGCTCATTTTTGGTACCATTGTGCGACGTCTGCTGCAGTAATTGGGGGAAGTCAAACCACTGCTaGCTTTTCAGAGGTGATGAA +
Preference number: 5 (lower is better)
Translates to: WRGSFLVPLCDVCCSNWGKSNHC*LFRGDE
Trigger: TTCATCACCTCTGAAAAGCAAGCAGTGGTTTGACTT...CCCCCAATTACTGCAGCAGACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAGGCGTATTCCAAGGGTaGTTGCAGGAGCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLGVFQG*LQEPQG
Trigger: ACCCTGGGGCTCCTGCAACAACCCTTGGAATACGCC...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGAGTTTGGTTTTATCTTaGCATTCTGGCGTATTCCAA +
Preference number: 5 (lower is better)
Translates to: GHRQTALQVVYVALYCSMSLVLS*HSGVFQ
Trigger: TTGGAATACGCCAGAATGCAAAGATAAAACCAAACT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGATGCTTGTGGCACTGTaGGTGCAGGTGACAATTAGA +
Preference number: 5 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQMLVAL*VQVTIR
Trigger: TCTAATTGTCACCTGCACCAACAGTGCCACAAGCAT...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp GGGCACAGGCAAACAGCGCTTCAGGTGGTCTATGTAGCTCTTTACTGCAGCATGATCTTCACAGAATCTTaGCAAGCCATACACATAAGA +
Preference number: 5 (lower is better)
Translates to: GHRQTALQVVYVALYCSMIFTES*QAIHIR
Trigger: TCTTATGTGTATGGCTTGCAAAGATTCTGTGAAGAT...CATGCTGCAGTAAAGAGCTACATAGACCACCTGAAGCGCTGTTTGCCTGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGGTTGGCCTTGGCCTTTaGGTCCTGCAAAACACCTGC +
Preference number: 5 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKVGLGL*VLQNTC
Trigger: GCAGGTGTTTTGCAGGACCAAAAGGCCAAGGCCAAC...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATGTATTCCAAGGGTTGTaGCAGGAGCCCCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHVFQGL*QEPQGS
Trigger: ACTACCCTGGGGCTCCTGCAACAACCCTTGGAATAC...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp GTGTGCGTAGGTACTTGGGAAACTCGTCTGAGATGGAGGTCACTATGGTCTCGATTCTTGATCTGTATTTaGGGATGGTCACTGATAACA +
Preference number: 5 (lower is better)
Translates to: VCVGTWETRLRWRSLWSRFLICI*GWSLIT
Trigger: TGTTATCAGTGACCATCCCAAAATACAGATCAAGAA...TCGAGACCATAGTGACCTCCATCTCAGACGAGTTTCCCAAGTACCTACGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCAAGCCGGCAAAGATGCTaGTGGCACTGTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPSRQRC*WHCWCR
Trigger: CCTGCACCAACAGTGCCACAAGCATCTTTGCCGGCT...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp CAGAACCAGGGTAAGTCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTGGAAGTTTTCTGCTaGATACCCAGTGTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: QNQGKSCFPRGQKTRCLQLEVFC*IPSVKE
Trigger: CTCTTTCACACTGGGTATCAAGCAGAAAACTTCCAG...CTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGACTTACCCTGGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTGCCGCCTCCGGGCTGTaGGCTGGCAGTTTATTCATT +
Preference number: 5 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSAASGL*AGSLFI
Trigger: AATGAATAAACTGCCAGCCAACAGCCCGGAGGCGGC...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAAAATGGCAATGATGACAAGGGCATAGGAGGCAGCATAGGTGTCCACAAGCTGTTCAGCACAAAGTACTaGAAGTACTCTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: KNGNDDKGIGGSIGVHKLFSTKY*KYSSLP
Trigger: TGGAAGTGAAGAGTACTTCAAGTACTTTGTGCTGAA...CAGCTTGTGGACACCTATGCTGCCTCCTATGCCCTTGTCATCATTGCCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp GCACACCAACTTCAGCCTCTCAATAAATCTTCCAGGGGCCAGATGCATTTTTATCTGACAAATGTCTTATaGGCCTGGCTGGTGAAATTA +
Preference number: 5 (lower is better)
Translates to: AHQLQPLNKSSRGQMHFYLTNVL*AWLVKL
Trigger: TAATTTCACCAGCCAGGCCAATAAGACATTTGTCAG...ATAAAAATGCATCTGGCCCCTGGAAGATTTATTGAGAGGCTGAAGTTGGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp TCTTGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAGCAGAAATTGGGTaGGCGTCCAGCATCAGACTG +
Preference number: 5 (lower is better)
Translates to: SCFPRGQKTRCLQLIERHLAEIG*ASSIRL
Trigger: CAGTCTGATGCTGGACGCCAACCCAATTTCTGCTAA...ATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAACATGTAAATTCCACCCTGAGTGATCATTGGAAAACCCATGATGAAGAAACATCCTTCACTGGCAGTTaGAGTCCCAAGGAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: KHVNSTLSDHWKTHDEETSFTGS*SPKEEV
Trigger: AACCTCTTCCTTGGGACTCAAACTGCCAGTGAAGGA...TGTTTCTTCATCATGGGTTTTCCAATGATCACTCAGGGTGGAATTTACATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTATCCTTCACTGGCAGTTaGAGTCCCAAGGAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLSFTGS*SPKEEV
Trigger: AACCTCTTCCTTGGGACTCAAACTGCCAGTGAAGGA...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAATGGAGAGGCTCATTTTaGGTACCATTGTGCGACGTC +
Preference number: 5 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKWRGSF*VPLCDV
Trigger: GACGTCGCACAATGGTACCAAAAATGAGCCTCTCCA...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGCTGACAAATGTCTTATaGGCCTGGCTGGTGAAATTA +
Preference number: 5 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKLTNVL*AWLVKL
Trigger: TAATTTCACCAGCCAGGCCAATAAGACATTTGTCAG...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AATAAATCTTCCAGGGGCCAGATGCATTTTTATCACAAACATAATTGGGATCCATTGACTTTGCGTTCATaGGCCATGAAGCCGATAACG +
Preference number: 5 (lower is better)
Translates to: NKSSRGQMHFYHKHNWDPLTLRS*AMKPIT
Trigger: CGTTATCGGCTTCATGGCCAATGAACGCAAAGTCAA...TGGATCCCAATTATGTTTGTGATAAAAATGCATCTGGCCCCTGGAAGATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298923.11
CDS-3UTR CAA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAATTGACTTTGCGTTCATaGGCCATGAAGCCGATAACG +
Preference number: 5 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKLTLRS*AMKPIT
Trigger: CGTTATCGGCTTCATGGCCAATGAACGCAAAGTCAA...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGAACTGGAAGTTCATATaGATGTTGGCAAATGGCGAT +
Preference number: 5 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKNWKFI*MLANGD
Trigger: ATCGCCATTTGCCAACATCAATATGAACTTCCAGTT...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp ACCACCTCAGTGGTGTCCAAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCATCATGATTTTGCATaGACCACAGACCTCATGCAA +
Preference number: 5 (lower is better)
Translates to: TTSVVSKLNGLVLHPKHFHHDFA*TTDLMQ
Trigger: TTGCATGAGGTCTGTGGTCAATGCAAAATCATGATG...AAAATGTTTTGGATGTAAGACAAGACCATTCAATTTGGACACCACTGAGGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAGCTAAGTTTAGGGGAAGCTCAAGGTTTAGTCTCTATGATAGACTCAAGCAAGCCATCTCATCTTACATaGAGCAACAGTTATTGTGCT +
Preference number: 5 (lower is better)
Translates to: KLSLGEAQGLVSMIDSSKPSHLT*SNSYCA
Trigger: AGCACAATAACTGTTGCTCAATGTAAGATGAGATGG...CTTGCTTGAGTCTATCATAGAGACTAAACCTTGAGCTTCCCCTAAACTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAAATCCTAGGGCCACTTaGTGGGGAAATGAGTATCAA +
Preference number: 5 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLNPRAT*WGNEYQ
Trigger: TTGATACTCATTTCCCCACAAAGTGGCCCTAGGATT...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTAAACAAGATCACCACATaGCTCAGTTCTGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLNKITT*LSSVQV
Trigger: GACTTGAACAGAACTGAGCAATGTGGTGATCTTGTT...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp TGTTTTCCCAGAGGTCAAAAGACAAGGTGTCTACAGCTTATAGAAAGACATTTATCAGTGGTGTCCAAATaGAATGGTCTTGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: CFPRGQKTRCLQLIERHLSVVSK*NGLVLH
Trigger: ATGTAAGACAAGACCATTCAATTTGGACACCACTGA...TAAATGTCTTTCTATAAGCTGTAGACACCTTGTCTTTTGACCTCTGGGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTTTCAGCACAAAGTACTaGAAGTACTCTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSFSTKY*KYSSLP
Trigger: TGGAAGTGAAGAGTACTTCAAGTACTTTGTGCTGAA...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AATAATCTCACAAGTGGAAAATGCTCCACCATTCTACACAGTGAACCAATGAAAACTTTTCCTGAAGTCTaGATTCCTTTAGCCAATGAT +
Preference number: 5 (lower is better)
Translates to: NNLTSGKCSTILHSEPMKTFPEV*IPLAND
Trigger: ATCATTGGCTAAAGGAATCAAGACTTCAGGAAAAGT...TTTCATTGGTTCACTGTGTAGAATGGTGGAGCATTTTCCACTTGTGAGATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTTTCTTGATCTGTATTTaGGGATGGTCACTGATAACA +
Preference number: 5 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSFLICI*GWSLIT
Trigger: TGTTATCAGTGACCATCCCAAAATACAGATCAAGAA...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTTGTTGTTGGGTTTCATaGCTGTTAAACAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSCCWVS*LLNRMK
Trigger: TTTCATCCTGTTTAACAGCAATGAAACCCAACAACA...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS-3UTR CAA 90 bp AAATTGAATGGTCTTGTCTTACATCCAAAACATTTTCTGACCACTGCTAACTCTAAGTTCATATTGATGTaGGCAAATGGCGATGATACT +
Preference number: 5 (lower is better)
Translates to: KLNGLVLHPKHFLTTANSKFILM*ANGDDT
Trigger: AGTATCATCGCCATTTGCCAACATCAATATGAACTT...AGAGTTAGCAGTGGTCAGAAAATGTTTTGGATGTAAGACAAGACCATTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS CCA 72 bp GGGAAGCTCCTGCTCCGGGCTCGTCCTGGGAGCGCATaGGCCATCCGGGTGGCCCTGCGCCGCCGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: GKLLLRARPGSA*AIRVALRRRRL
Trigger: GAGGCGGCGGCGGCGCAGGGCCACCCGGATGGCCCATGCGCTCCCAGGACGAGCCCGGAGCAGGAGCTTCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 72 bp CGGCAGCCGCGGGAAGCTCCTGCTCCGGGCTCGTCCTaGGAGCGCATGGGCCATCCGGGTGGCCCTGCGCCG +
Preference number: 6 (lower is better)
Translates to: RQPREAPAPGSS*ERMGHPGGPAP
Trigger: CGGCGCAGGGCCACCCGGATGGCCCATGCGCTCCCAGGACGAGCCCGGAGCAGGAGCTTCCCGCGGCTGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS GCA 72 bp CCGGAGCTCCCGGGAGGGGGCGAGGCCTGCGCGCCTTaGGCCTCTCTCAAGTCCCGCAGAGCTGCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: PELPGGGEACAP*ASLKSRRAAEA
Trigger: GGCCTCTGCAGCTCTGCGGGACTTGAGAGAGGCGCAAGGCGCGCAGGCCTCGCCCCCTCCCGGGAGCTCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 72 bp CTCGCGCGTCCGCTGACTGGAAAGTTTGGGCGCCGGTaGAAGCGGACCTGGGCACACGTGGCGGCGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LARPLTGKFGRR*KRTWAHVAAAG
Trigger: CCCCGCCGCCGCCACGTGTGCCCAGGTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 72 bp GGCCGCTCAGCCTCGCAGGCTCGCGCGTCCGCTGACTaGAAAGTTTGGGCGCCGGTGGAAGCGGACCTGGGC +
Preference number: 6 (lower is better)
Translates to: GRSASQARASAD*KVWAPVEADLG
Trigger: GCCCAGGTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCCTGCGAGGCTGAGCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS GCA 72 bp GGCCTCGCAGAAAAGGGATCTTACAGTGCAGCGCGTTaGCGGGCCCGGAGCTCCCGGGAGGGGGCGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GLAEKGSYSAAR*RARSSREGARP
Trigger: AGGCCTCGCCCCCTCCCGGGAGCTCCGGGCCCGGCAACGCGCTGCACTGTAAGATCCCTTTTCTGCGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS GCA 72 bp TCCCCCTCCGGGCCTCGCAGAAAAGGGATCTTACAGTaGAGCGCGTTGCCGGGCCCGGAGCTCCCGGGAGGG +
Preference number: 6 (lower is better)
Translates to: SPSGPRRKGILQ*SALPGPELPGG
Trigger: CCCTCCCGGGAGCTCCGGGCCCGGCAACGCGCTGCACTGTAAGATCCCTTTTCTGCGAGGCCCGGAGGGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 72 bp GCCTCGCAGGCTCGCGCGTCCGCTGACTGGAAAGTTTaGGCGCCGGTGGAAGCGGACCTGGGCACACGTGGC +
Preference number: 6 (lower is better)
Translates to: ASQARASADWKV*APVEADLGTRG
Trigger: GCCACGTGTGCCCAGGTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCCTGCGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CAA 72 bp GCTGCAGAGGCCGCCTGCGCCCGCGGGCTACTGAGTTaGCAAGACCCCACTCCTGGCCGCTCAGCCTCGCAG +
Preference number: 6 (lower is better)
Translates to: AAEAACARGLLS*QDPTPGRSASQ
Trigger: CTGCGAGGCTGAGCGGCCAGGAGTGGGGTCTTGCAAACTCAGTAGCCCGCGGGCGCAGGCGGCCTCTGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS TCA 72 bp TCCTGGCCGCTCAGCCTCGCAGGCTCGCGCGTCCGCTaGCTGGAAAGTTTGGGCGCCGGTGGAAGCGGACCT +
Preference number: 6 (lower is better)
Translates to: SWPLSLAGSRVR*LESLGAGGSGP
Trigger: AGGTCCGCTTCCACCGGCGCCCAAACTTTCCAGTCAGCGGACGCGCGAGCCTGCGAGGCTGAGCGGCCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS GCA 72 bp CTGCGCGCCTTGCGCCTCTCTCAAGTCCCGCAGAGCTaGAGAGGCCGCCTGCGCCCGCGGGCTACTGAGTTT +
Preference number: 6 (lower is better)
Translates to: LRALRLSQVPQS*RGRLRPRATEF
Trigger: AAACTCAGTAGCCCGCGGGCGCAGGCGGCCTCTGCAGCTCTGCGGGACTTGAGAGAGGCGCAAGGCGCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS GCA 72 bp CCCAGCCCACAACAGGGGTATTGTTCCGCTCCAGGGTaGCCTTGCCCACACTCACGTTCGCATCCCCCTCCG +
Preference number: 6 (lower is better)
Translates to: PSPQQGYCSAPG*PCPHSRSHPPP
Trigger: CGGAGGGGGATGCGAACGTGAGTGTGGGCAAGGGCACCCTGGAGCGGAACAATACCCCTGTTGTGGGCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CAA 72 bp CCCACAACAGGGGTATTGTTCCGCTCCAGGGTGCCCTaGCCCACACTCACGTTCGCATCCCCCTCCGGGCCT +
Preference number: 6 (lower is better)
Translates to: PTTGVLFRSRVP*PTLTFASPSGP
Trigger: AGGCCCGGAGGGGGATGCGAACGTGAGTGTGGGCAAGGGCACCCTGGAGCGGAACAATACCCCTGTTGTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CAA 90 bp TTCACCCAGCCCACAACAGGGGTATTGTTCCGCTCCAGGGTGCCCTaGCCCACACTCACGTTCGCATCCCCCTCCGGGCCTCGCAGAAAA +
Preference number: 6 (lower is better)
Translates to: FTQPTTGVLFRSRVP*PTLTFASPSGPRRK
Trigger: TTTTCTGCGAGGCCCGGAGGGGGATGCGAACGTGAGTGTGGGCAAGGGCACCCTGGAGCGGAACAATACCCCTGTTGTGGGCTGGGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CAA 90 bp ACCACGGTGCTCTGGCTCATGTTCACCCAGCCCACAACAGGGGTATaGTTCCGCTCCAGGGTGCCCTTGCCCACACTCACGTTCGCATCC +
Preference number: 6 (lower is better)
Translates to: TTVLWLMFTQPTTGV*FRSRVPLPTLTFAS
Trigger: GGATGCGAACGTGAGTGTGGGCAAGGGCACCCTGGAGCGGAACAATACCCCTGTTGTGGGCTGGGTGAACATGAGCCAGAGCACCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CAA 72 bp CTCTGGCTCATGTTCACCCAGCCCACAACAGGGGTATaGTTCCGCTCCAGGGTGCCCTTGCCCACACTCACG +
Preference number: 6 (lower is better)
Translates to: LWLMFTQPTTGV*FRSRVPLPTLT
Trigger: CGTGAGTGTGGGCAAGGGCACCCTGGAGCGGAACAATACCCCTGTTGTGGGCTGGGTGAACATGAGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 72 bp GACGTGATTCCATCCGTGGCCAGCACCACGGTGCTCTaGCTCATGTTCACCCAGCCCACAACAGGGGTATTG +
Preference number: 6 (lower is better)
Translates to: DVIPSVASTTVL*LMFTQPTTGVL
Trigger: CAATACCCCTGTTGTGGGCTGGGTGAACATGAGCCAGAGCACCGTGGTGCTGGCCACGGATGGAATCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CAA 72 bp ACTGCGTACCCCACCATGGACAGGATGAAGTCCAGTTaGCTGGACCAGTTCCCTCGGGCCTTATTCTCATCC +
Preference number: 6 (lower is better)
Translates to: TAYPTMDRMKSS*LDQFPRALFSS
Trigger: GGATGAGAATAAGGCCCGAGGGAACTGGTCCAGCAAACTGGACTTCATCCTGTCCATGGTGGGGTACGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525748.6
CDS TCA 72 bp AGCCGGCAAAGATGCTTGTGGCACTGTTGGTGCAGGTaGCAATTAGAGTGTCCCTTCATCGCAGAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: SRQRCLWHCWCR*QLECPFIAEPA
Trigger: AGCAGGCTCTGCGATGAAGGGACACTCTAATTGTCACCTGCACCAACAGTGCCACAAGCATCTTTGCCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528440.1
CDS CCA 72 bp CTGCAATCCATGTCTGACACAGGCAACAGACTGAACTaGTGGAGGGTGAAACCCGCTATTGACAAGACTGGG +
Preference number: 6 (lower is better)
Translates to: LQSMSDTGNRLN*WRVKPAIDKTG
Trigger: CCCAGTCTTGTCAATAGCGGGTTTCACCCTCCACCAGTTCAGTCTGTTGCCTGTGTCAGACATGGATTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 72 bp CCTCCGGGCTGTTGGCTGGCAGTTTATTCATTTCCTTaGGAGCACTGCAATCCATGTCTGACACAGGCAACA +
Preference number: 6 (lower is better)
Translates to: PPGCWLAVYSFP*EHCNPCLTQAT
Trigger: TGTTGCCTGTGTCAGACATGGATTGCAGTGCTCCCAAGGAAATGAATAAACTGCCAGCCAACAGCCCGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 72 bp CAATCCATGTCTGACACAGGCAACAGACTGAACTGGTaGAGGGTGAAACCCGCTATTGACAAGACTGGGTTT +
Preference number: 6 (lower is better)
Translates to: QSMSDTGNRLNW*RVKPAIDKTGF
Trigger: AAACCCAGTCTTGTCAATAGCGGGTTTCACCCTCCACCAGTTCAGTCTGTTGCCTGTGTCAGACATGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298923.11
ENST00000525748.6
CDS CCA 72 bp GAAAAACAGGATCAAGTCTGGACCATCCCACACCACTaGACTAGCACTGAGTGCCCAGTTCCAAATCCTTCA +
Preference number: 6 (lower is better)
Translates to: EKQDQVWTIPHH*TSTECPVPNPS
Trigger: TGAAGGATTTGGAACTGGGCACTCAGTGCTAGTCCAGTGGTGTGGGATGGTCCAGACTTGATCCTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525748.6
ENST00000528440.1